{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,6]],"date-time":"2024-09-06T00:28:17Z","timestamp":1725582497244},"publisher-location":"Berlin, Heidelberg","reference-count":19,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783642212598"},{"type":"electronic","value":"9783642212604"}],"license":[{"start":{"date-parts":[[2011,1,1]],"date-time":"2011-01-01T00:00:00Z","timestamp":1293840000000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2011]]},"DOI":"10.1007\/978-3-642-21260-4_35","type":"book-chapter","created":{"date-parts":[[2011,4,29]],"date-time":"2011-04-29T00:26:59Z","timestamp":1304036819000},"page":"368-379","source":"Crossref","is-referenced-by-count":1,"title":["Multi-label Correlated Semi-supervised Learning for Protein Function Prediction"],"prefix":"10.1007","author":[{"given":"Jonathan Q.","family":"Jiang","sequence":"first","affiliation":[]}],"member":"297","reference":[{"issue":"Database issue","key":"35_CR1","first-page":"637","volume":"36","author":"B.J. Breitkreutz","year":"2008","unstructured":"Breitkreutz, B.J., Stark, C., Reguly, T., et al.: The BioGRID Interaction Database: 2008 update. Nucleic Acids Res.\u00a036(Database issue), D637\u2013D640 (2008)","journal-title":"Nucleic Acids Res."},{"doi-asserted-by":"crossref","unstructured":"Chen, G., Song, Y., Wang, F., Zhang, C.: Semi-supervised Multi-label Learning by Solving a Sylvester Equation. In: SIAM International Conference on Data Mining (2008)","key":"35_CR2","DOI":"10.1137\/1.9781611972788.37"},{"key":"35_CR3","doi-asserted-by":"publisher","first-page":"1623","DOI":"10.1093\/bioinformatics\/btl145","volume":"22","author":"H.N. Chua","year":"2006","unstructured":"Chua, H.N., Sung, W.K., Wong, L.: Exploiting indirect neighbours and topological weight to predict protein function from protein-protein interactions. Bioinformatics\u00a022, 1623\u20131630 (2006)","journal-title":"Bioinformatics"},{"key":"35_CR4","doi-asserted-by":"publisher","first-page":"207","DOI":"10.1093\/nar\/30.1.207","volume":"30","author":"R. Edgar","year":"2002","unstructured":"Edgar, R., Domrachev, M., Lash, A.E.: Gene Expression Omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res.\u00a030, 207\u2013210 (2002)","journal-title":"Nucleic Acids Res."},{"unstructured":"Fan, R.-E., Lin, C.-J.: A Study on Threshold Selection for Multi-label Classification. Technical Report, National Taiwan University (2007)","key":"35_CR5"},{"key":"35_CR6","doi-asserted-by":"publisher","first-page":"141","DOI":"10.1038\/415141a","volume":"415","author":"A.C. Gavin","year":"2002","unstructured":"Gavin, A.C., Bosche, M., Krause, R., Grandi, P., Marzioch, M., Bauer, A., Schultz, J., Rick, J.M., Michon, A.M., Cruciat, C.M., et al.: Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature\u00a0415, 141\u2013147 (2002)","journal-title":"Nature"},{"key":"35_CR7","doi-asserted-by":"publisher","first-page":"99","DOI":"10.1038\/nature02800","volume":"431","author":"C.T. Harbison","year":"2004","unstructured":"Harbison, C.T., Gordon, D.B., Lee, T.I., Rinaldi, N.J., Macisaac, K.D., Danford, T.W., Hannett, N.M., Tagne, J.-B., Reynolds, D.B., Yoo, J., et al.: Transcriptional regulatory code of a eukaryotic genome. Nature\u00a0431, 99\u2013104 (2004)","journal-title":"Nature"},{"key":"35_CR8","doi-asserted-by":"publisher","first-page":"523","DOI":"10.1002\/yea.706","volume":"18","author":"H. Hishigaki","year":"2001","unstructured":"Hishigaki, H., Nakai, K., Ono, T., Tanigami, A., Takagi, T.: Assessment of prediction accuracy of protein function from proteinCprotein interaction data. Yeast\u00a018, 523\u2013531 (2001)","journal-title":"Yeast"},{"key":"35_CR9","doi-asserted-by":"publisher","first-page":"1143","DOI":"10.1073\/pnas.97.3.1143","volume":"97","author":"T. Ito","year":"2000","unstructured":"Ito, T., Tashiro, K., Muta, S., Ozawa, R., Chiba, T., Nishizawa, M., Yamamoto, K., Kuhara, S., Sakaki, Y.: Toward a protein-protein interaction map of the budding yeast: a comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins. Proc. Natl Acad. Sci. USA\u00a097, 1143\u20131147 (2000)","journal-title":"Proc. Natl Acad. Sci. USA"},{"key":"35_CR10","doi-asserted-by":"publisher","first-page":"2888","DOI":"10.1073\/pnas.0307326101","volume":"101","author":"U. Karaoz","year":"2004","unstructured":"Karaoz, U., Murali, T.M., Letovsky, S., Zheng, Y., Ding, C., Cantor, C.R., Kasif, S.: Whole-genome annotation by using evidence integration in functional-linkage networks. Proc. Natl. Acad. Sci. USA\u00a0101, 2888\u20132893 (2004)","journal-title":"Proc. Natl. Acad. Sci. USA"},{"issue":"Suppl 1","key":"35_CR11","doi-asserted-by":"publisher","first-page":"302","DOI":"10.1093\/bioinformatics\/bti1054","volume":"21","author":"E. Nabieva","year":"2005","unstructured":"Nabieva, E., Jim, K., Agarwal, A., Chazelle, B., Singh, M.: Whole-proteome prediction of protein function via graph-theoretic analysis of interaction maps. Bioinformatics\u00a021(Suppl 1), i302\u2013i310 (2005)","journal-title":"Bioinformatics"},{"key":"35_CR12","volume-title":"Proceedings of the Fifth Annual International Conference on Computational Biology","author":"P. Pavlidis","year":"2001","unstructured":"Pavlidis, P., Weston, J., Cai, J., Grundy, W.N.: Gene functional classification from heterogeneous data. In: Proceedings of the Fifth Annual International Conference on Computational Biology. ACM Press, Montreal (2001)"},{"key":"35_CR13","doi-asserted-by":"publisher","first-page":"4285","DOI":"10.1073\/pnas.96.8.4285","volume":"96","author":"M. Pellegrini","year":"1999","unstructured":"Pellegrini, M., Marcotte, E.M., Thompson, M.J., Eisenberg, D., Yeates, T.O.: Assigning protein functions by comparative genome analysis: protein phylogenetic profiles. Proc. Natl. Acad. Sci. USA\u00a096, 4285\u20134288 (1999)","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"35_CR14","doi-asserted-by":"publisher","first-page":"1257","DOI":"10.1038\/82360","volume":"18","author":"B. Schwikowski","year":"2000","unstructured":"Schwikowski, B., Uetz, P., Fields, S.: A network of proteinCprotein interactions in yeast. Nat. Biotechnol.\u00a018, 1257\u20131261 (2000)","journal-title":"Nat. Biotechnol."},{"key":"35_CR15","doi-asserted-by":"publisher","first-page":"88","DOI":"10.1038\/msb4100129","volume":"3","author":"R. Sharan","year":"2007","unstructured":"Sharan, R., Ulitsky, I., Shamir, R.: Network-based prediction of protein function. Molecular Systems Biology\u00a03, 88 (2007)","journal-title":"Molecular Systems Biology"},{"key":"35_CR16","doi-asserted-by":"publisher","first-page":"12763","DOI":"10.1073\/pnas.0806627105","volume":"105","author":"R. Singh","year":"2008","unstructured":"Singh, R., Xu, J., Berger, B.: Global alignment of multiple protein interaction networks with application to functional orthology detection. Proc. Natl. Acad. Sci. USA\u00a0105, 12763\u201312768 (2008)","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"35_CR17","doi-asserted-by":"publisher","first-page":"697","DOI":"10.1038\/nbt825","volume":"21","author":"A. Vazquez","year":"2003","unstructured":"Vazquez, A., Flammini, A., Maritan, A., Vespignani, A.: Global protein function prediction from proteinCprotein interaction networks. Nat. Biotechnol.\u00a021, 697\u2013700 (2003)","journal-title":"Nat. Biotechnol."},{"unstructured":"Zha, Z., Mei, T., Wang, J., Wang, Z., Hua, X.: Graph-based semi-supervised learning with multi-label. In: IEEE International Conference on Multiamedia and Expo (2008)","key":"35_CR18"},{"key":"35_CR19","first-page":"321","volume-title":"Advances in Neural Information Processing Systems (NIPS)","author":"D. Zhou","year":"2004","unstructured":"Zhou, D., Bousquet, O., Lal, T.N., Weston, J., Scholkopf, B.: Learning with local and global consistency. In: Advances in Neural Information Processing Systems (NIPS), vol.\u00a016, pp. 321\u2013328. MIT Press, Cambridge (2004)"}],"container-title":["Lecture Notes in Computer Science","Bioinformatics Research and Applications"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-642-21260-4_35","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,5,23]],"date-time":"2019-05-23T01:39:17Z","timestamp":1558575557000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-642-21260-4_35"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2011]]},"ISBN":["9783642212598","9783642212604"],"references-count":19,"URL":"https:\/\/doi.org\/10.1007\/978-3-642-21260-4_35","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2011]]}}}