{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,7,26]],"date-time":"2025-07-26T09:18:09Z","timestamp":1753521489475,"version":"3.40.3"},"publisher-location":"Berlin, Heidelberg","reference-count":16,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783642236372"},{"type":"electronic","value":"9783642236389"}],"license":[{"start":{"date-parts":[[2011,1,1]],"date-time":"2011-01-01T00:00:00Z","timestamp":1293840000000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2011]]},"DOI":"10.1007\/978-3-642-23638-9_12","type":"book-chapter","created":{"date-parts":[[2011,9,9]],"date-time":"2011-09-09T17:31:12Z","timestamp":1315589472000},"page":"130-144","source":"Crossref","is-referenced-by-count":18,"title":["Modelling, Simulating and Verifying Turing-Powerful Strand Displacement Systems"],"prefix":"10.1007","author":[{"given":"Matthew R.","family":"Lakin","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Andrew","family":"Phillips","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"issue":"39","key":"12_CR1","doi-asserted-by":"publisher","first-page":"16777","DOI":"10.1073\/pnas.1006377107","volume":"107","author":"S. Venkataraman","year":"2010","unstructured":"Venkataraman, S., Dirks, R.M., Ueda, C.T., Pierce, N.A.: Selective cell death mediated by small conditional RNAs. Proc. Natl. Acad. Sci. U S A\u00a0107(39), 16777\u201316782 (2010)","journal-title":"Proc. Natl. Acad. Sci. U S A"},{"issue":"1","key":"12_CR2","doi-asserted-by":"publisher","first-page":"230","DOI":"10.1112\/plms\/s2-42.1.230","volume":"42","author":"A.M. Turing","year":"1937","unstructured":"Turing, A.M.: On computable numbers, with an application to the Entscheidungsproblem. Proc. London Mathematical Society\u00a0s2-42(1), 230\u2013265 (1937)","journal-title":"Proc. London Mathematical Society"},{"key":"12_CR3","doi-asserted-by":"publisher","first-page":"103","DOI":"10.1038\/nchem.957","volume":"3","author":"D.Y. Zhang","year":"2011","unstructured":"Zhang, D.Y., Seelig, G.: Dynamic DNA nanotechnology using strand-displacement reactions. Nat. Chem.\u00a03, 103\u2013113 (2011)","journal-title":"Nat. Chem."},{"key":"12_CR4","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"123","DOI":"10.1007\/978-3-642-18305-8_12","volume-title":"DNA Computing and Molecular Programming","author":"L. Qian","year":"2011","unstructured":"Qian, L., Soloveichik, D., Winfree, E.: Efficient turing-universal computation with DNA polymers. In: Sakakibara, Y., Mi, Y. (eds.) DNA 16 2010. LNCS, vol.\u00a06518, pp. 123\u2013140. Springer, Heidelberg (2011)"},{"issue":"suppl 4","key":"12_CR5","doi-asserted-by":"publisher","first-page":"419","DOI":"10.1098\/rsif.2009.0072.focus","volume":"6","author":"A. Phillips","year":"2009","unstructured":"Phillips, A., Cardelli, L.: A programming language for composable DNA circuits. J. R. Soc. Interface\u00a06(suppl 4), S419\u2013S436 (2009)","journal-title":"J. R. Soc. Interface"},{"key":"12_CR6","first-page":"43","volume-title":"Proc. CMSB 2010","author":"L. Paulev\u00e9","year":"2010","unstructured":"Paulev\u00e9, L., Youssef, S., Lakin, M.R., Phillips, A.: A generic abstract machine for stochastic process calculi. In: Proc. CMSB 2010, pp. 43\u201354. ACM, New York (2010)"},{"key":"12_CR7","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"162","DOI":"10.1007\/978-3-642-18305-8_15","volume-title":"DNA Computing and Molecular Programming","author":"D.Y. Zhang","year":"2011","unstructured":"Zhang, D.Y.: Towards domain-based sequence design for DNA strand displacement reactions. In: Sakakibara, Y., Mi, Y. (eds.) DNA 16 2010. LNCS, vol.\u00a06518, pp. 162\u2013175. Springer, Heidelberg (2011)"},{"key":"12_CR8","doi-asserted-by":"publisher","first-page":"1716","DOI":"10.1063\/1.1378322","volume":"115","author":"D.T. Gillespie","year":"2001","unstructured":"Gillespie, D.T.: Exact stochastic simulation of coupled chemical reactions. J. Phys. Chem.\u00a0115, 1716\u20131733 (2001)","journal-title":"J. Phys. Chem."},{"key":"12_CR9","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"441","DOI":"10.1007\/11691372_29","volume-title":"Tools and Algorithms for the Construction and Analysis of Systems","author":"A. Hinton","year":"2006","unstructured":"Hinton, A., Kwiatkowska, M., Norman, G., Parker, D.: PRISM: A tool for automatic verification of probabilistic systems. In: Hermanns, H., Palsberg, J. (eds.) TACAS 2006. LNCS, vol.\u00a03920, pp. 441\u2013444. Springer, Heidelberg (2006)"},{"issue":"12","key":"12_CR10","doi-asserted-by":"publisher","first-page":"905","DOI":"10.1007\/BF02084158","volume":"21","author":"C.H. Bennett","year":"1982","unstructured":"Bennett, C.H.: The thermodynamics of computation\u2014a review. Int. J. Theor. Phys.\u00a021(12), 905\u2013939 (1982)","journal-title":"Int. J. Theor. Phys."},{"issue":"1","key":"12_CR11","doi-asserted-by":"publisher","first-page":"45","DOI":"10.1017\/S0960129509990259","volume":"20","author":"L. Cardelli","year":"2010","unstructured":"Cardelli, L., Zavattaro, G.: Turing universality of the biochemical ground form. Math. Struct. Comp. Sci.\u00a020(1), 45\u201373 (2010)","journal-title":"Math. Struct. Comp. Sci."},{"key":"12_CR12","doi-asserted-by":"publisher","first-page":"615","DOI":"10.1007\/s11047-008-9067-y","volume":"7","author":"D. Soloveichik","year":"2008","unstructured":"Soloveichik, D., Cook, M., Winfree, E., Bruck, J.: Computation with finite stochastic chemical reaction networks. Nat. Comput.\u00a07, 615\u2013633 (2008)","journal-title":"Nat. Comput."},{"key":"12_CR13","doi-asserted-by":"publisher","first-page":"543","DOI":"10.1007\/978-3-540-88869-7_27","volume-title":"Algorithmic Bioprocesses","author":"M. Cook","year":"2009","unstructured":"Cook, M., Soloveichik, D., Winfree, E., Bruck, J.: Programmability of chemical reaction networks. In: Condon, A., Harel, D., Kok, J.N., Salomaa, A., Winfree, E. (eds.) Algorithmic Bioprocesses, pp. 543\u2013584. Springer, Heidelberg (2009)"},{"key":"12_CR14","doi-asserted-by":"crossref","unstructured":"Jiang, H., Riedel, M.D., Parhi, K.K.: Synchronous sequential computation with molecular reactions. In: Design Automation Conference, San Diego, California, USA, June 5\u201310 (2011)","DOI":"10.1145\/2024724.2024911"},{"key":"12_CR15","doi-asserted-by":"crossref","first-page":"75","DOI":"10.1090\/dimacs\/027\/06","volume-title":"DNA Based Computers: DIMACS Workshop","author":"P.W.K. Rothemund","year":"1996","unstructured":"Rothemund, P.W.K.: A DNA and restriction enzyme implementation of Turing machines. In: Lipton, R.J., Baum, E.B. (eds.) DNA Based Computers: DIMACS Workshop, held April 4, pp. 75\u2013120. American Mathematical Society, Providence (1996)"},{"issue":"1","key":"12_CR16","doi-asserted-by":"publisher","first-page":"87","DOI":"10.1145\/345099.345104","volume":"22","author":"O. Kupferman","year":"2000","unstructured":"Kupferman, O., Vardi, M.Y.: An automata-theoretic approach to modular model checking. ACM T. Progr. Lang. Sys.\u00a022(1), 87\u2013128 (2000)","journal-title":"ACM T. Progr. Lang. Sys."}],"container-title":["Lecture Notes in Computer Science","DNA Computing and Molecular Programming"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-642-23638-9_12","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,4,2]],"date-time":"2019-04-02T07:49:29Z","timestamp":1554191369000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-642-23638-9_12"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2011]]},"ISBN":["9783642236372","9783642236389"],"references-count":16,"URL":"https:\/\/doi.org\/10.1007\/978-3-642-23638-9_12","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2011]]}}}