{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,3,28]],"date-time":"2025-03-28T02:21:16Z","timestamp":1743128476807,"version":"3.40.3"},"publisher-location":"Berlin, Heidelberg","reference-count":33,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783642280665"},{"type":"electronic","value":"9783642280672"}],"license":[{"start":{"date-parts":[[2012,1,1]],"date-time":"2012-01-01T00:00:00Z","timestamp":1325376000000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2012]]},"DOI":"10.1007\/978-3-642-28067-2_8","type":"book-chapter","created":{"date-parts":[[2012,1,11]],"date-time":"2012-01-11T20:51:05Z","timestamp":1326315065000},"page":"136-148","source":"Crossref","is-referenced-by-count":0,"title":["Composability: Perspectives in Ecological Modeling"],"prefix":"10.1007","author":[{"given":"Ozan","family":"Kahramano\u011fullar\u0131","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ferenc","family":"Jord\u00e1n","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Corrado","family":"Priami","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"key":"8_CR1","unstructured":"Allen, T.F.H., Starr, T.B.: Hierarchy: Perspectives for Ecological Complexity. The University of Chicago Press (1982)"},{"key":"8_CR2","doi-asserted-by":"publisher","first-page":"191","DOI":"10.1016\/0169-5347(94)90088-4","volume":"9","author":"M.D. Bertness","year":"1994","unstructured":"Bertness, M.D., Callaway, R.: Positive interaction in communities. Trends in Ecology and Evolution\u00a09, 191\u2013193 (1994)","journal-title":"Trends in Ecology and Evolution"},{"key":"8_CR3","doi-asserted-by":"publisher","first-page":"1529","DOI":"10.2307\/1939614","volume":"75","author":"I. Billick","year":"1994","unstructured":"Billick, I., Case, T.J.: Higher order interactions in ecological communities: what are they and how can they be detected? Ecology\u00a075, 1529\u20131543 (1994)","journal-title":"Ecology"},{"key":"8_CR4","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-4757-0869-1","volume-title":"Individual-based Models and Approaches in Ecology","author":"D.L. DeAngelis","year":"1992","unstructured":"DeAngelis, D.L., Gross, L.J.: Individual-based Models and Approaches in Ecology. Chapman and Hall, New York (1992)"},{"issue":"3","key":"8_CR5","first-page":"101","volume":"164","author":"P. Degano","year":"2005","unstructured":"Degano, P., Prandi, D., Priami, C., Quaglia, P.: Beta binders for biological quantitative experiments. ENTCS\u00a0164(3), 101\u2013117 (2005)","journal-title":"ENTCS"},{"key":"8_CR6","doi-asserted-by":"publisher","first-page":"777","DOI":"10.1007\/978-1-4419-5797-9_31","volume":"1","author":"L. Dematt\u00e9","year":"2010","unstructured":"Dematt\u00e9, L., Larcher, R., Palmisano, A., Priami, C., Romanel, A.: Programming biology in BlenX. Systems Biology for Signaling Networks\u00a01, 777\u2013821 (2010)","journal-title":"Systems Biology for Signaling Networks"},{"key":"8_CR7","doi-asserted-by":"publisher","first-page":"437","DOI":"10.1093\/bib\/bbn023","volume":"9","author":"L. Dematt\u00e9","year":"2008","unstructured":"Dematt\u00e9, L., Priami, C., Romanel, A.: The beta workbench: a computational tool to study the dynamics of biological systems. Briefings in Bioinformatics\u00a09, 437\u2013449 (2008)","journal-title":"Briefings in Bioinformatics"},{"key":"8_CR8","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"313","DOI":"10.1007\/978-3-540-68894-5_9","volume-title":"Formal Methods for Computational Systems Biology","author":"L. Dematt\u00e9","year":"2008","unstructured":"Dematt\u00e9, L., Priami, C., Romanel, A.: The Blenx Language: A Tutorial. In: Bernardo, M., Degano, P., Tennenholtz, M. (eds.) SFM 2008. LNCS, vol.\u00a05016, pp. 313\u2013365. Springer, Heidelberg (2008)"},{"key":"8_CR9","doi-asserted-by":"publisher","first-page":"2340","DOI":"10.1021\/j100540a008","volume":"81","author":"D.T. Gillespie","year":"1977","unstructured":"Gillespie, D.T.: Exact stochastic simulation of coupled chemical reactions. Journal of Physical Chemistry\u00a081, 2340\u20132361 (1977)","journal-title":"Journal of Physical Chemistry"},{"key":"8_CR10","doi-asserted-by":"publisher","first-page":"129","DOI":"10.1016\/S0304-3800(98)00188-4","volume":"115","author":"V. Grimm","year":"1999","unstructured":"Grimm, V.: Ten years of individual-based modelling in ecology: what have we learned and what could we learn in the future? Ecological Modelling\u00a0115, 129\u2013148 (1999)","journal-title":"Ecological Modelling"},{"issue":"1-2","key":"8_CR11","doi-asserted-by":"publisher","first-page":"115","DOI":"10.1016\/j.ecolmodel.2006.04.023","volume":"198","author":"V. Grimm","year":"2006","unstructured":"Grimm, V., Berger, U., Bastiansen, F., Eliassen, S., Ginot, V., Giske, J., Goss-Custard, J., Grand, T., Heinz, S.K., Huse, G., Huth, A., Jepsen, J.U., J\u00f8rgensen, C., Mooij, W.M., M\u00fcller, B., Peer, G., Piou, C., Railsback, S.F., Robbins, A.M., Robbins, M.M., Rossmanith, E., R\u00fcger, N., Strand, E., Souissim, S., Stillman, R.A., Vab\u00f8, R., Visser, U., DeAngelis, D.L.: A standard protocol for describing individual-based and agent-based models. Ecological Modelling\u00a0198(1-2), 115\u2013126 (2006)","journal-title":"Ecological Modelling"},{"issue":"1-3","key":"8_CR12","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1016\/S0304-3800(98)00017-9","volume":"108","author":"A. Gronewold","year":"1998","unstructured":"Gronewold, A., Sonnenschein, M.: Event-based modelling of ecological systems with asynchronous cellular automata. Ecological Modelling\u00a0108(1-3), 37\u201352 (1998)","journal-title":"Ecological Modelling"},{"issue":"2","key":"8_CR13","doi-asserted-by":"publisher","first-page":"197","DOI":"10.1016\/0040-5809(77)90042-9","volume":"12","author":"R.D. Holt","year":"1977","unstructured":"Holt, R.D.: Predation, apparent competition, and the structure of prey communities. Theoretical Population Biology\u00a012(2), 197\u2013229 (1977)","journal-title":"Theoretical Population Biology"},{"key":"8_CR14","doi-asserted-by":"publisher","first-page":"685","DOI":"10.1016\/j.envsoft.2010.12.007","volume":"26","author":"O. Kahramano\u011fullar\u0131","year":"2011","unstructured":"Kahramano\u011fullar\u0131, O., Jord\u00e1n, F., Lynch, J.: CoSBiLab LIME: A language interface for stochastic dynamical modelling in ecology. Environmental Modelling and Software\u00a026, 685\u2013687 (2011)","journal-title":"Environmental Modelling and Software"},{"key":"8_CR15","doi-asserted-by":"publisher","first-page":"1662","DOI":"10.1126\/science.1069492","volume":"295","author":"H. Kitano","year":"2002","unstructured":"Kitano, H.: Systems biology: A brief overview. Science\u00a0295, 1662\u20131664 (2002)","journal-title":"Science"},{"issue":"5","key":"8_CR16","doi-asserted-by":"publisher","first-page":"431","DOI":"10.1007\/s100219900037","volume":"1","author":"S.A. Levin","year":"1998","unstructured":"Levin, S.A.: Ecosystems and the biosphere as complex adaptive systems. Ecosystems\u00a01(5), 431\u2013436 (1998)","journal-title":"Ecosystems"},{"issue":"5298","key":"8_CR17","doi-asserted-by":"publisher","first-page":"334","DOI":"10.1126\/science.275.5298.334","volume":"275","author":"S.A. Levin","year":"1997","unstructured":"Levin, S.A., Grenfell, B., Hastings, A., Perelson, A.S.: Mathematical and computational challenges in population biology and ecosystems science. Science\u00a0275(5298), 334\u2013343 (1997)","journal-title":"Science"},{"key":"8_CR18","doi-asserted-by":"crossref","first-page":"12","DOI":"10.1038\/119012a0","volume":"119","author":"A.J. Lotka","year":"1927","unstructured":"Lotka, A.J.: Fluctuations in the abundance of a species considered mathematically. Nature\u00a0119, 12 (1927)","journal-title":"Nature"},{"issue":"1524","key":"8_CR19","doi-asserted-by":"publisher","first-page":"1755","DOI":"10.1098\/rstb.2008.0222","volume":"364","author":"H. Olff","year":"2009","unstructured":"Olff, H., Alonso, D., Berg, M.P., Eriksson, B.K., Loreau, M., Piersma, T., Rooney, N.: Parallel ecological networks in ecosystems. Philosophical Transactions of Royal Society B\u00a0364(1524), 1755\u20131779 (2009)","journal-title":"Philosophical Transactions of Royal Society B"},{"key":"8_CR20","doi-asserted-by":"publisher","first-page":"139","DOI":"10.2307\/3544422","volume":"35","author":"S.L. Pimm","year":"1980","unstructured":"Pimm, S.L.: Food web design and the effects of species deletion. Oikos\u00a035, 139\u2013149 (1980)","journal-title":"Oikos"},{"key":"8_CR21","unstructured":"Pimm, S.L.: The Balance of Nature? Ecological Issues in the Conservation of Species and Communities. The University of Chicago Press (1991)"},{"key":"8_CR22","unstructured":"Platt, T., Mann, K.H., Ulanowicz, R.E.: Mathematical Models in Biological Oceanography. The UNESCO Press (1981)"},{"issue":"1","key":"8_CR23","doi-asserted-by":"publisher","first-page":"170","DOI":"10.1016\/j.jtbi.2008.11.006","volume":"257","author":"C.R. Powell","year":"2009","unstructured":"Powell, C.R., Boland, R.P.: The effects of stochastic population dynamics on food web structure. Journal of Theoretical Biology\u00a0257(1), 170\u2013180 (2009)","journal-title":"Journal of Theoretical Biology"},{"issue":"6","key":"8_CR24","doi-asserted-by":"publisher","first-page":"578","DOI":"10.1093\/comjnl\/38.7.578","volume":"38","author":"C. Priami","year":"1995","unstructured":"Priami, C.: Stochastic \u03c0-calculus. The Computer Journal\u00a038(6), 578\u2013589 (1995)","journal-title":"The Computer Journal"},{"issue":"5","key":"8_CR25","doi-asserted-by":"publisher","first-page":"80","DOI":"10.1145\/1506409.1506427","volume":"52","author":"C. Priami","year":"2009","unstructured":"Priami, C.: Algorithmic systems biology. Communications of the ACM\u00a052(5), 80\u201389 (2009)","journal-title":"Communications of the ACM"},{"issue":"3","key":"8_CR26","doi-asserted-by":"publisher","first-page":"259","DOI":"10.1093\/bib\/5.3.259","volume":"5","author":"C. Priami","year":"2004","unstructured":"Priami, C., Quaglia, P.: Modelling the dynamics of biosystems. Briefings in Bioinformatics\u00a05(3), 259\u2013269 (2004)","journal-title":"Briefings in Bioinformatics"},{"key":"8_CR27","doi-asserted-by":"publisher","first-page":"343","DOI":"10.1038\/419343a","volume":"419","author":"A. Regev","year":"2002","unstructured":"Regev, A., Shapiro, E.: Cellular abstractions: Cells as computation. Nature\u00a0419, 343 (2002)","journal-title":"Nature"},{"issue":"1485","key":"8_CR28","doi-asserted-by":"publisher","first-page":"1545","DOI":"10.1098\/rstb.2007.2052","volume":"362","author":"A.K. Seth","year":"2007","unstructured":"Seth, A.K.: The ecology of action selection: insights from artificial life. Philosophical Transactions of Royal Society B\u00a0362(1485), 1545\u20131558 (2007)","journal-title":"Philosophical Transactions of Royal Society B"},{"key":"8_CR29","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-4612-4916-0","volume-title":"Growth and Development: Ecosystems Phenomenology","author":"R.E. Ulanowicz","year":"1986","unstructured":"Ulanowicz, R.E.: Growth and Development: Ecosystems Phenomenology. Springer, Heidelberg (1986)"},{"key":"8_CR30","doi-asserted-by":"publisher","first-page":"886","DOI":"10.1016\/j.envsoft.2010.02.001","volume":"25","author":"R. Valentini","year":"2010","unstructured":"Valentini, R., Jord\u00e1n, F.: CoSBiLab Graph: the network analysis module of CoSBiLab. Environmental Modelling and Software\u00a025, 886\u2013888 (2010)","journal-title":"Environmental Modelling and Software"},{"issue":"3-4","key":"8_CR31","doi-asserted-by":"publisher","first-page":"365","DOI":"10.1016\/j.ecolmodel.2006.02.024","volume":"196","author":"V. Vasas","year":"2006","unstructured":"Vasas, V., Jord\u00e1n, F.: Topological keystone species in ecological interaction networks: considering link quality and non-trophic effects. Ecological Modelling\u00a0196(3-4), 365\u2013378 (2006)","journal-title":"Ecological Modelling"},{"key":"8_CR32","doi-asserted-by":"publisher","first-page":"558","DOI":"10.1038\/118558a0","volume":"118","author":"V. Volterra","year":"1926","unstructured":"Volterra, V.: Fluctuations in the abundance of species considered mathematically. Nature\u00a0118, 558\u2013560 (1926)","journal-title":"Nature"},{"issue":"1","key":"8_CR33","doi-asserted-by":"publisher","first-page":"71","DOI":"10.1086\/285461","volume":"141","author":"J.T. Wootton","year":"1993","unstructured":"Wootton, J.T.: Indirect effects and habitat use in an intertidal community: interaction chains and interaction modifications. The American Naturalist\u00a0141(1), 71\u201389 (1993)","journal-title":"The American Naturalist"}],"container-title":["Lecture Notes in Computer Science","Algebraic and Numeric Biology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-642-28067-2_8","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,5,19]],"date-time":"2019-05-19T20:37:49Z","timestamp":1558298269000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-642-28067-2_8"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2012]]},"ISBN":["9783642280665","9783642280672"],"references-count":33,"URL":"https:\/\/doi.org\/10.1007\/978-3-642-28067-2_8","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2012]]}}}