{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,18]],"date-time":"2025-11-18T09:15:07Z","timestamp":1763457307910},"publisher-location":"Cham","reference-count":28,"publisher":"Springer International Publishing","isbn-type":[{"type":"print","value":"9783319125671"},{"type":"electronic","value":"9783319125688"}],"license":[{"start":{"date-parts":[[2012,1,1]],"date-time":"2012-01-01T00:00:00Z","timestamp":1325376000000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2012]]},"DOI":"10.1007\/978-3-642-29749-6_14","type":"book-chapter","created":{"date-parts":[[2012,4,12]],"date-time":"2012-04-12T09:47:47Z","timestamp":1334224067000},"page":"202-217","source":"Crossref","is-referenced-by-count":4,"title":["When Process Mining Meets Bioinformatics"],"prefix":"10.1007","author":[{"given":"R. P. Jagadeesh Chandra","family":"Bose","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wil M. P.","family":"van der Aalst","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"issue":"4","key":"14_CR1","doi-asserted-by":"crossref","first-page":"346","DOI":"10.1055\/s-0038-1634431","volume":"40","author":"N. Luscombe","year":"2001","unstructured":"Luscombe, N., Greenbaum, D., Gerstein, M.: What is Bioinformatics? A Proposed Definition and Overview of the Field. Methods of Information in Medicine\u00a040(4), 346\u2013358 (2001)","journal-title":"Methods of Information in Medicine"},{"key":"14_CR2","doi-asserted-by":"crossref","unstructured":"van der Aalst, W.M.P.: Process Mining: Discovery, Conformance and Enhancement of Business Processes. Springer (2011)","DOI":"10.1007\/978-3-642-19345-3"},{"issue":"1","key":"14_CR3","doi-asserted-by":"publisher","first-page":"64","DOI":"10.1016\/j.is.2007.07.001","volume":"33","author":"A. Rozinat","year":"2008","unstructured":"Rozinat, A., van der Aalst, W.M.P.: Conformance Checking of Processes Based on Monitoring Real Behavior. Information Systems\u00a033(1), 64\u201395 (2008)","journal-title":"Information Systems"},{"issue":"3","key":"14_CR4","doi-asserted-by":"publisher","first-page":"90","DOI":"10.1109\/MC.2010.61","volume":"43","author":"W.M.P. Aalst van der","year":"2010","unstructured":"van der Aalst, W.M.P., van Hee, K.M., van der Werf, J.M., Verdonk, M.: Auditing 2.0: Using Process Mining to Support Tomorrow\u2019s Auditor. Computer\u00a043(3), 90\u201393 (2010)","journal-title":"Computer"},{"key":"14_CR5","doi-asserted-by":"publisher","first-page":"3","DOI":"10.1016\/j.entcs.2004.10.013","volume":"121","author":"W.M.P. Aalst van der","year":"2005","unstructured":"van der Aalst, W.M.P., de Medeiros, A.K.A.: Process Mining and Security: Detecting Anamolous Process Executions and Checking Process Conformance. Electronic Notes in Theoretical Computer Science\u00a0121, 3\u201321 (2005)","journal-title":"Electronic Notes in Theoretical Computer Science"},{"issue":"1","key":"14_CR6","doi-asserted-by":"publisher","first-page":"56","DOI":"10.1016\/j.eswa.2005.09.003","volume":"31","author":"W.S. Yang","year":"2006","unstructured":"Yang, W.S., Hwang, S.Y.: A Process Mining Framework for the Detection of Healthcare Fraud and Abuse. Expert Systems with Applications\u00a031(1), 56\u201368 (2006)","journal-title":"Expert Systems with Applications"},{"key":"14_CR7","unstructured":"Bezerra, F., Wainer, J., van der Aalst, W.M.P.: Anomaly Detection Using Process Mining. In: Halpin, T., Krogstie, J., Nurcan, S., Proper, E., Schmidt, R., Soffer, P., Ukor, R. (eds.) BPMDS 2009 and EMMSAD 2009. LNBIP, vol.\u00a029, pp. 149\u2013161. Springer, Heidelberg (2009)"},{"key":"14_CR8","unstructured":"van der Aalst, W.M.P.: Challenges in Business Process Mining. Technical Report BPM-10-01, Business Process Management (BPM) Center (2010)"},{"key":"14_CR9","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"391","DOI":"10.1007\/978-3-642-21640-4_30","volume-title":"Advanced Information Systems Engineering","author":"R.P.J.C. Bose","year":"2011","unstructured":"Bose, R.P.J.C., van der Aalst, W.M.P., \u017dliobait\u0117, I., Pechenizkiy, M.: Handling Concept Drift in Process Mining. In: Mouratidis, H., Rolland, C. (eds.) CAiSE 2011. LNCS, vol.\u00a06741, pp. 391\u2013405. Springer, Heidelberg (2011)"},{"key":"14_CR10","doi-asserted-by":"crossref","unstructured":"Das, M.K., Dai, H.K.: A Survey of DNA Motif Finding Algorithms. BMC Bioinformatics\u00a08(suppl. 7), S21 (2007)","DOI":"10.1186\/1471-2105-8-S7-S21"},{"issue":"13","key":"14_CR11","doi-asserted-by":"publisher","first-page":"3672","DOI":"10.1093\/nar\/gkg617","volume":"31","author":"R. Kolpakov","year":"2003","unstructured":"Kolpakov, R., Bana, G., Kucherov, G.: mreps: Efficient and Flexible Detection of Tandem Repeats in DNA. Nucleic Acids Research\u00a031(13), 3672\u20133678 (2003)","journal-title":"Nucleic Acids Research"},{"key":"14_CR12","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"159","DOI":"10.1007\/978-3-642-03848-8_12","volume-title":"Business Process Management","author":"R.P. Jagadeesh Chandra Bose","year":"2009","unstructured":"Jagadeesh Chandra Bose, R.P., van der Aalst, W.M.P.: Abstractions in Process Mining: A Taxonomy of Patterns. In: Dayal, U., Eder, J., Koehler, J., Reijers, H.A. (eds.) BPM 2009. LNCS, vol.\u00a05701, pp. 159\u2013175. Springer, Heidelberg (2009)"},{"key":"14_CR13","series-title":"LNBIP","doi-asserted-by":"publisher","first-page":"109","DOI":"10.1007\/978-3-642-20511-8_10","volume-title":"Business Process Management Workshops","author":"J. Li","year":"2011","unstructured":"Li, J., Jagadeesh Chandra Bose, R.P., van der Aalst, W.M.P.: Mining Context-Dependent and Interactive Business Process Maps Using Execution Patterns. In: zur Muehlen, M., Su, J. (eds.) BPM 2010 Workshops. LNBIP, vol.\u00a066, pp. 109\u2013121. Springer, Heidelberg (2011)"},{"key":"14_CR14","unstructured":"Jagadeesh Chandra Bose, R.P., van der Aalst, W.M.P.: Analysis of Patient Treatment Procedures: The BPI Challenge Case Study. Technical Report BPM-11-18, BPMCenter.org (2011), http:\/\/bpmcenter.org\/wp-content\/uploads\/reports\/2011\/BPM-11-18.pdf"},{"issue":"4","key":"14_CR15","doi-asserted-by":"crossref","first-page":"563","DOI":"10.1007\/BF02459635","volume":"54","author":"S. Chan","year":"1992","unstructured":"Chan, S., Wong, A.K.C., Chiu, D.: A Survey of Multiple Sequence Comparison Methods. Bulletin of Mathematical Biology\u00a054(4), 563\u2013598 (1992)","journal-title":"Bulletin of Mathematical Biology"},{"key":"14_CR16","doi-asserted-by":"publisher","first-page":"159","DOI":"10.1016\/S0065-227X(99)80007-0","volume":"36","author":"O. Gotoh","year":"1999","unstructured":"Gotoh, O.: Multiple Sequence Alignment: Algorithms and Applications. Advanced Biophysics\u00a036, 159\u2013206 (1999)","journal-title":"Advanced Biophysics"},{"key":"14_CR17","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"227","DOI":"10.1007\/978-3-642-15618-2_17","volume-title":"Business Process Management","author":"R.P.J.C. Bose","year":"2010","unstructured":"Jagadeesh Chandra Bose, R.P., van der Aalst, W.M.P.: Trace Alignment in Process Mining: Opportunities for Process Diagnostics. In: Hull, R., Mendling, J., Tai, S. (eds.) BPM 2010. LNCS, vol.\u00a06336, pp. 227\u2013242. Springer, Heidelberg (2010)"},{"key":"14_CR18","doi-asserted-by":"publisher","first-page":"131","DOI":"10.1517\/14622416.3.1.131","volume":"3","author":"C. Notredame","year":"2002","unstructured":"Notredame, C.: Recent Progress in Multiple Sequence Alignment: A Survey. Pharmacogenomics\u00a03, 131\u2013144 (2002)","journal-title":"Pharmacogenomics"},{"issue":"1","key":"14_CR19","doi-asserted-by":"publisher","first-page":"41","DOI":"10.1146\/annurev.genom.1.1.41","volume":"1","author":"J.W. Thornton","year":"2000","unstructured":"Thornton, J.W., DeSalle, R.: Gene Family Evolution and Homology: Genomics Meets Phylogenetics. Annual Review of Genomics and Human Genetics\u00a01(1), 41\u201373 (2000)","journal-title":"Annual Review of Genomics and Human Genetics"},{"key":"14_CR20","unstructured":"Olson, S.: Evolution in Hawaii: A Supplement to Teaching About Evolution and the Nature of Science. National Academic Press (2004)"},{"key":"14_CR21","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"95","DOI":"10.1007\/978-3-642-15618-2_9","volume-title":"Business Process Management","author":"W.M.P. Aalst van der","year":"2010","unstructured":"van der Aalst, W.M.P., Lohmann, N., Rosa, M.L., Xu, J.: Correctness Ensuring Process Configuration: An Approach Based on Partner Synthesis. In: Hull, R., Mendling, J., Tai, S. (eds.) BPM 2010. LNCS, vol.\u00a06336, pp. 95\u2013111. Springer, Heidelberg (2010)"},{"key":"14_CR22","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"574","DOI":"10.1007\/978-3-540-72988-4_40","volume-title":"Advanced Information Systems Engineering","author":"B. Weber","year":"2007","unstructured":"Weber, B., Rinderle, S., Reichert, M.: Change Patterns and Change Support Features in Process-Aware Information Systems. In: Krogstie, J., Opdahl, A.L., Sindre, G. (eds.) CAiSE 2007 and WES 2007. LNCS, vol.\u00a04495, pp. 574\u2013588. Springer, Heidelberg (2007)"},{"issue":"6","key":"14_CR23","doi-asserted-by":"publisher","first-page":"583","DOI":"10.1057\/palgrave.ejis.3000645","volume":"15","author":"A. Dreiling","year":"2006","unstructured":"Dreiling, A., Rosemann, M., van der Aalst, W.M.P., Heuser, L., Schulz, K.: Model-Based Software Configuration: Patterns and Languages. European Journal of Information Systems\u00a015(6), 583\u2013600 (2006)","journal-title":"European Journal of Information Systems"},{"key":"14_CR24","unstructured":"Jagadeesh Chandra Bose, R.P., van der Aalst, W.M.P.: Context Aware Trace Clustering: Towards Improving Process Mining Results. In: Proceedings of the SIAM International Conference on Data Mining (SDM), pp. 401\u2013412 (2009)"},{"key":"14_CR25","series-title":"LNBIP","doi-asserted-by":"publisher","first-page":"170","DOI":"10.1007\/978-3-642-12186-9_16","volume-title":"Business Process Management Workshops","author":"R.P. Jagadeesh Chandra Bose","year":"2010","unstructured":"Jagadeesh Chandra Bose, R.P., van der Aalst, W.M.P.: Trace Clustering Based on Conserved Patterns: Towards Achieving Better Process Models. In: Rinderle-Ma, S., Sadiq, S., Leymann, F. (eds.) BPM 2009. LNBIP, vol.\u00a043, pp. 170\u2013181. Springer, Heidelberg (2010)"},{"key":"14_CR26","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"publisher","first-page":"360","DOI":"10.1007\/978-3-540-75183-0_26","volume-title":"Business Process Management","author":"D. Ferreira","year":"2007","unstructured":"Ferreira, D., Zacarias, M., Malheiros, M., Ferreira, P.: Approaching Process Mining with Sequence Clustering: Experiments and Findings. In: Alonso, G., Dadam, P., Rosemann, M. (eds.) BPM 2007. LNCS, vol.\u00a04714, pp. 360\u2013374. Springer, Heidelberg (2007)"},{"issue":"6","key":"14_CR27","doi-asserted-by":"publisher","first-page":"7029","DOI":"10.1016\/j.eswa.2010.12.012","volume":"38","author":"M.L. Rosa","year":"2011","unstructured":"Rosa, M.L., Reijers, H.A., van der Aalst, W.M.P., Dijkman, R.M., Mendling, J., Dumas, M., Garcia-Banuelos, L.: APROMORE: An Advanced Process Model Repository. Expert Systems with Applications\u00a038(6), 7029\u20137040 (2011)","journal-title":"Expert Systems with Applications"},{"key":"14_CR28","unstructured":"3TU.DataCentrum: http:\/\/data.3tu.nl\/repository\/collection:event_logs"}],"container-title":["Lecture Notes in Computer Science","Progress in Pattern Recognition, Image Analysis, Computer Vision, and Applications"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-642-29749-6_14","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,1,12]],"date-time":"2022-01-12T18:11:37Z","timestamp":1642011097000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-642-29749-6_14"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2012]]},"ISBN":["9783319125671","9783319125688"],"references-count":28,"URL":"https:\/\/doi.org\/10.1007\/978-3-642-29749-6_14","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2012]]}}}