{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,3,26]],"date-time":"2025-03-26T08:50:52Z","timestamp":1742979052266,"version":"3.40.3"},"publisher-location":"Berlin, Heidelberg","reference-count":32,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783642339011"},{"type":"electronic","value":"9783642339028"}],"license":[{"start":{"date-parts":[[2012,1,1]],"date-time":"2012-01-01T00:00:00Z","timestamp":1325376000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2012,1,1]],"date-time":"2012-01-01T00:00:00Z","timestamp":1325376000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2012]]},"DOI":"10.1007\/978-3-642-33902-8_15","type":"book-chapter","created":{"date-parts":[[2012,12,12]],"date-time":"2012-12-12T09:26:53Z","timestamp":1355304413000},"page":"383-405","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":1,"title":["A Computational Framework for Multilevel Morphologies"],"prefix":"10.1007","author":[{"given":"Sara","family":"Montagna","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mirko","family":"Viroli","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2012,12,13]]},"reference":[{"issue":"1","key":"15_CR1","doi-asserted-by":"publisher","first-page":"68","DOI":"10.1145\/1327452.1327484","volume":"51","author":"G. Agha","year":"2008","unstructured":"Agha, G.: Computing in pervasive cyberspace. Commun. ACM 51(1), 68\u201370 (2008). doi:10.1145\/1327452.1327484","journal-title":"Commun. ACM"},{"key":"15_CR2","unstructured":"Alberts, B., Johnson, A., Lewis, J., Raff, M., Roberts, K., Walter, P.: Molecular Biology of the Cell, 4th edn. Garland Science Textbooks. Garland Science, New York (2002)"},{"issue":"6","key":"15_CR3","doi-asserted-by":"publisher","first-page":"667","DOI":"10.1038\/nbt0606-667","volume":"24","author":"R. Alves","year":"2006","unstructured":"Alves, R., Antunes, F., Salvador, A.: Tools for kinetic modeling of biochemical networks. Nat. Biotechnol. 24(6), 667\u2013672 (2006). doi:10.1038\/nbt0606-667","journal-title":"Nat. Biotechnol."},{"key":"15_CR4","doi-asserted-by":"publisher","unstructured":"Babaoglu, O., Canright, G., Deutsch, A., Caro, G.A.D., Ducatelle, F., Gambardella, L.M., Ganguly, N., Jelasity, M., Montemanni, R., Montresor, A., Urnes, T.: Design patterns from biology for distributed computing. ACM Trans. Auton. Adapt. Syst. 1(1), 26\u201366 (2006). doi:10.1145\/1152934.1152937","DOI":"10.1145\/1152934.1152937"},{"issue":"5","key":"15_CR5","doi-asserted-by":"publisher","first-page":"31","DOI":"10.1109\/MITP.2006.123","volume":"8","author":"A.P. Barros","year":"2006","unstructured":"Barros, A.P., Dumas, M.: The rise of web service ecosystems. IT Prof. 8(5), 31\u201337 (2006). doi:10.1109\/MITP.2006.123","journal-title":"IT Prof."},{"key":"15_CR6","doi-asserted-by":"publisher","unstructured":"Beal, J., Bachrach, J.: Infrastructure for engineered emergence on sensor\/actuator networks. IEEE Intell. Syst. 21(2), 10\u201319 (2006). doi:10.1109\/MIS.2006.29","DOI":"10.1109\/MIS.2006.29"},{"key":"15_CR7","doi-asserted-by":"publisher","unstructured":"Beal, J., Bachrach, J., Vickery, D., Tobenkin, M.: Fast self-healing gradients. In: SAC \u201908: Proceedings of the 2008 ACM Symposium on Applied Computing, pp. 1969\u20131975. ACM, New York (2008). doi:10.1145\/1363686.1364163","DOI":"10.1145\/1363686.1364163"},{"issue":"5","key":"15_CR8","doi-asserted-by":"publisher","first-page":"1530","DOI":"10.2307\/1940005","volume":"73","author":"AA Berryman","year":"1992","unstructured":"Berryman, A.A.: The origins and evolution of predator-prey theory. Ecology 73(5), 1530\u20131535 (1992)","journal-title":"Ecology"},{"issue":"1","key":"15_CR9","doi-asserted-by":"publisher","first-page":"74","DOI":"10.1145\/1327452.1327486","volume":"51","author":"J. Crowcroft","year":"2008","unstructured":"Crowcroft, J.: Toward a network architecture that does everything. Commun. ACM 51(1), 74\u201377 (2008). doi:10.1145\/1327452.1327486","journal-title":"Commun. ACM"},{"issue":"2","key":"15_CR10","doi-asserted-by":"publisher","first-page":"217","DOI":"10.1016\/j.scico.2005.02.001","volume":"57","author":"E. Denti","year":"2005","unstructured":"Denti, E., Omicini, A., Ricci, A.: Multi-paradigm Java-Prolog integration in tuProlog. Sci. Comput. Program. 57(2), 217\u2013250 (2005). doi:10.1016\/j.scico.2005.02.001, http:\/\/authors.elsevier.com\/sd\/article\/S0167642305000158","journal-title":"Sci. Comput. Program."},{"issue":"9","key":"15_CR11","doi-asserted-by":"publisher","first-page":"1876","DOI":"10.1021\/jp993732q","volume":"104","author":"MA Gibson","year":"2000","unstructured":"Gibson, M.A., Bruck, J.: Efficient exact stochastic simulation of chemical systems with many species and many channels. J. Phys. Chem. A 104(9), 1876\u20131889 (2000). doi:10.1021\/jp993732q","journal-title":"J. Phys. Chem. A"},{"key":"15_CR12","volume-title":"Developmental Biology","author":"SF Gilbert","year":"2006","unstructured":"Gilbert, S.F.: Developmental Biology, 8th edn. Sinauer Associates Inc, Massachusetts (2006)","edition":"8"},{"issue":"25","key":"15_CR13","doi-asserted-by":"publisher","first-page":"2340","DOI":"10.1021\/j100540a008","volume":"81","author":"DT Gillespie","year":"1977","unstructured":"Gillespie, D.T.: Exact stochastic simulation of coupled chemical reactions. J. Phys. Chem. 81(25), 2340\u20132361 (1977)","journal-title":"J. Phys. Chem."},{"key":"15_CR14","doi-asserted-by":"publisher","first-page":"271","DOI":"10.1016\/0092-8674(92)90470-W","volume":"68","author":"I Greenwald","year":"1992","unstructured":"Greenwald, I., Rubin, G.M.: Making a difference: the role of cell-cell interactions in establishing separate identities for equivalent cells. Cell 68, 271\u2013281 (1992)","journal-title":"Cell"},{"issue":"4","key":"15_CR15","doi-asserted-by":"crossref","first-page":"363","DOI":"10.1016\/j.bbagrm.2008.07.014","volume":"1789","author":"W.J. Longabaugh","year":"2009","unstructured":"Longabaugh, W.J., Davidson, E.H., Bolouri, H.: Visualization, documentation, analysis, and communication of large-scale gene regulatory networks. Biochimica et Biophysica Acta (BBA) Gene Regul. Mech. 1789(4), 363\u2013374 (2009)","journal-title":"Biochimica et Biophysica Acta (BBA) Gene Regul. Mech."},{"key":"15_CR16","unstructured":"Mamei, M., Zambonelli, F.: Field-Based Coordination for Pervasive Multiagent Systems. Springer, Berlin (2006)"},{"key":"15_CR17","doi-asserted-by":"publisher","unstructured":"Mamei, M., Zambonelli, F.: Programming pervasive and mobile computing applications: The tota approach. ACM Trans. Softw. Eng. Methodol. 18(4), 1\u201356 (2009). doi:10.1145\/1538942.1538945","DOI":"10.1145\/1538942.1538945"},{"key":"15_CR18","doi-asserted-by":"crossref","unstructured":"Montagna, S., Viroli, M.: A framework for modelling and simulating networks of cells. Electron. Notes Theor. Comput. Sci. 268, 115\u2013129 (2010). Proceedings of the 1st International Workshop on Interactions between Computer Science and Biology (CS2Bio\u201910)","DOI":"10.1016\/j.entcs.2010.12.009"},{"key":"15_CR19","doi-asserted-by":"crossref","DOI":"10.1007\/978-3-642-56196-2","volume-title":"Membrane Computing: An Introduction","author":"G Paun","year":"2002","unstructured":"Paun, G.: Membrane Computing: An Introduction. Springer-Verlag New York, Inc., Secaucus (2002)"},{"issue":"5","key":"15_CR20","doi-asserted-by":"publisher","first-page":"e51","DOI":"10.1371\/journal.pcbi.0020051","volume":"2","author":"TJ Perkins","year":"2006","unstructured":"Perkins, T.J., Jaeger, J., Reinitz, J., Glass, L.: Reverse engineering the gap gene network of Drosophila Melanogaster. PLoS Comput. Biol. 2(5), e51 (2006). doi:10.1371\/journal.pcbi.0020051","journal-title":"PLoS Comput. Biol."},{"key":"15_CR21","unstructured":"Phillips, A.: The Stochastic Pi Machine (SPiM), Version 0.042. http:\/\/www.doc.ic.ac.uk\/anp\/spim\/ (2006)"},{"issue":"Database-Issue","key":"15_CR22","doi-asserted-by":"crossref","first-page":"560","DOI":"10.1093\/nar\/gkn717","volume":"37","author":"A. Pisarev","year":"2009","unstructured":"Pisarev, A., Poustelnikova, E., Samsonova, M., Reinitz, J.: Flyex, the quantitative atlas on segmentation gene expression at cellular resolution. Nucleic Acids Res. 37(Database-Issue), 560\u2013566 (2009)","journal-title":"Nucleic Acids Res."},{"issue":"14","key":"15_CR23","doi-asserted-by":"publisher","first-page":"2212","DOI":"10.1093\/bioinformatics\/bth222","volume":"20","author":"E Poustelnikova","year":"2004","unstructured":"Poustelnikova, E., Pisarev, A., Blagov, M., Samsonova, M., Reinitz, J.: A database for management of gene expression data in situ. Bioinformatics 20(14), 2212\u20132221 (2004)","journal-title":"Bioinformatics"},{"issue":"3","key":"15_CR24","doi-asserted-by":"publisher","first-page":"458","DOI":"10.1016\/j.biosystems.2006.12.009","volume":"91","author":"A Spicher","year":"2008","unstructured":"Spicher, A., Michel, O., Cieslak, M., Giavitto, J.L., Prusinkiewicz, P.: Stochastic P systems and the simulation of biochemical processes with dynamic compartments. Biosystems 91(3), 458\u2013472 (2008)","journal-title":"Biosystems"},{"key":"15_CR25","doi-asserted-by":"crossref","unstructured":"Spicher, A., Michel, O., Giavitto, J.L.: A topological framework for the specification and the simulation of discrete dynamical systems. In: Sloot, P.M.A., Chopard, B., Hoekstra, A.G. (eds.) Cellular Automata. Lecture Notes in Computer Science, vol. 3305, pp. 238\u2013247. Springer, Berlin\/Heidelberg (2004)","DOI":"10.1007\/978-3-540-30479-1_25"},{"key":"15_CR26","doi-asserted-by":"crossref","unstructured":"Surkova, S., Kosman, D., Kozlov, K.: Manu, Myasnikova, E., Samsonova, A.A., Spirov, A., Vanario-Alonso, C.E., Samsonova, M., Reinitz, J.: Characterization of the Drosophila segment determination morphome. Dev. Biol. 313(2), 844\u2013862 (2008)","DOI":"10.1016\/j.ydbio.2007.10.037"},{"key":"15_CR27","doi-asserted-by":"crossref","unstructured":"Uhrmacher, A.M., Degenring, D., Zeigler, B.: Discrete event multi-level models for systems biology. In: Priami, C. (ed.) Transactions on Computational Systems Biology I. Lecture Notes in Computer Science, vol. 3380, pp. 66\u201389. Springer, Heidelberg (2005)","DOI":"10.1007\/978-3-540-32126-2_6"},{"issue":"3","key":"15_CR28","doi-asserted-by":"publisher","first-page":"165","DOI":"10.1016\/j.entcs.2007.12.012","volume":"194","author":"C Versari","year":"2008","unstructured":"Versari, C., Busi, N.: Efficient stochastic simulation of biological systems with multiple variable volumes. Electr. Notes Theor. Comput. Sci. 194(3), 165\u2013180 (2008)","journal-title":"Electr. Notes Theor. Comput. Sci."},{"key":"15_CR29","doi-asserted-by":"crossref","unstructured":"Villalba, C., Rosi, A., Viroli, M., Zambonelli, F.: Nature-inspired spatial metaphors for pervasive service ecosystems. In: Workshop on Spatial Computing, Venice, Italy (Informal Proceedings) (2008)","DOI":"10.1109\/SASOW.2008.47"},{"issue":"2","key":"15_CR30","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1145\/1968513.1968517","volume":"6","author":"M. Viroli","year":"2011","unstructured":"Viroli, M., Casadei, M., Montagna, S., Zambonelli, F.: Spatial coordination of pervasive services through chemical-inspired tuple spaces. ACM Trans. Auton. Adapt. Syst. 6(2), 14:1\u201314:24 (2011). doi:10.1145\/1968513.1968517","journal-title":"ACM Trans. Auton. Adapt. Syst."},{"key":"15_CR31","doi-asserted-by":"crossref","unstructured":"Viroli, M., Casadei, M., Omicini, A.: A framework for modelling and implementing self-organising coordination. In: Shin, S.Y., Ossowski, S., Menezes, R.. Viroli, M. (eds.) 24th Annual ACM Symposium on Applied Computing (SAC 2009), vol. III, pp. 1353\u20131360. ACM, Honolulu, Hawai\u2019i, USA (2009)","DOI":"10.1145\/1529282.1529585"},{"key":"15_CR32","doi-asserted-by":"publisher","unstructured":"Zambonelli, F., Viroli, M.: Architecture and metaphors for eternally adaptive service ecosystems. In: IDC\u201908, Studies in Computational Intelligence, vol. 162\/2008, pp. 23\u201332. Springer, Berlin\/Heidelberg (2008). doi:10.1007\/978-3-540-85257-5-3","DOI":"10.1007\/978-3-540-85257-5-3"}],"container-title":["Understanding Complex Systems","Morphogenetic Engineering"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-642-33902-8_15","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,1,23]],"date-time":"2023-01-23T17:12:29Z","timestamp":1674493949000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/978-3-642-33902-8_15"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2012]]},"ISBN":["9783642339011","9783642339028"],"references-count":32,"URL":"https:\/\/doi.org\/10.1007\/978-3-642-33902-8_15","relation":{},"ISSN":["1860-0832","1860-0840"],"issn-type":[{"type":"print","value":"1860-0832"},{"type":"electronic","value":"1860-0840"}],"subject":[],"published":{"date-parts":[[2012]]},"assertion":[{"value":"13 December 2012","order":1,"name":"first_online","label":"First Online","group":{"name":"ChapterHistory","label":"Chapter History"}}]}}