{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,1]],"date-time":"2025-11-01T05:28:02Z","timestamp":1761974882610,"version":"build-2065373602"},"publisher-location":"Berlin, Heidelberg","reference-count":18,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783642383410"},{"type":"electronic","value":"9783642383427"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2013]]},"DOI":"10.1007\/978-3-642-38342-7_6","type":"book-chapter","created":{"date-parts":[[2013,5,22]],"date-time":"2013-05-22T02:05:51Z","timestamp":1369188351000},"page":"57-69","source":"Crossref","is-referenced-by-count":2,"title":["Searching Structural Blocks by SS Exhaustive Matching"],"prefix":"10.1007","author":[{"given":"Virginio","family":"Cantoni","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Alessio","family":"Ferone","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ozlem","family":"Ozbudak","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Alfredo","family":"Petrosino","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"issue":"2","key":"6_CR1","doi-asserted-by":"publisher","first-page":"111","DOI":"10.1016\/0031-3203(81)90009-1","volume":"13","author":"D.H. Ballard","year":"1981","unstructured":"Ballard, D.H.: Generalizing the Hough Transform to Detect Arbitrary Shapes. Pattern Recognition\u00a013(2), 111\u2013122 (1981)","journal-title":"Pattern Recognition"},{"issue":"suppl. 1","key":"6_CR2","doi-asserted-by":"publisher","first-page":"81","DOI":"10.1093\/bioinformatics\/btg1009","volume":"19","author":"O. Camoglu","year":"2003","unstructured":"Camoglu, O., Kahveci, T., Singh, A.: PSI: Indexing Protein Structures for Fast Similarity Search. Bioinformatics\u00a019(suppl. 1), 81\u201383 (2003)","journal-title":"Bioinformatics"},{"key":"6_CR3","doi-asserted-by":"crossref","unstructured":"Can, T., Wang, Y.F.: CTSS: A Robust and Efficient Method for Protein Structure Alignment Based on Local Geometrical and Biological Features. In: Proc. of the IEEE Computer Society Conference on Bioinformatics, pp. 169\u2013179 (2003)","DOI":"10.1109\/CSB.2003.1227316"},{"key":"6_CR4","first-page":"39","volume":"35","author":"V. Cantoni","year":"2012","unstructured":"Cantoni, V., Mattia, E.: Protein structure analysis through Hough transform and range tree. Nuovo Cimento della Societ\u00e0 Italiana di Fisica. C, Geophysics and Space Physics\u00a035, 39\u201345 (2012)","journal-title":"Nuovo Cimento della Societ\u00e0 Italiana di Fisica. C, Geophysics and Space Physics"},{"key":"6_CR5","unstructured":"Cantoni, V., Ferone, A., Petrosino, A.: Protein motif retrieval through secondary structure spatial co-occurrences. Nuovo Cimento della Societ\u00e0 Italiana di Fisica. C, Geophysics and Space Physics 35 C, 47\u201354 (2012)"},{"key":"6_CR6","unstructured":"Cantoni, V., Ferone, A., Ozbudak, O., Petrosino, A.: Structural Analysis of Protein Secondary Structure by GHT. In: 21st International Conference on Pattern Recognition, ICPR 2012, Tsukuba, Japan, November 11-15, pp. 1767\u20131770. IEEE Computer Society (2012) ISBN: 9784990644116"},{"key":"6_CR7","doi-asserted-by":"crossref","unstructured":"Cantoni, V., Ferone, A., Ozbudak, O., Petrosino, A.: Search of Protein Structural Blocks through Secondary Structure Triplets. In: 3rd International Conference on Image Processing Theory, Tools and Applications, IPTA 2012, Istanbul, Turkey, October 15-18, pp. 222\u2013226. IEEE Press (2012) ISBN: 9781467325844","DOI":"10.1109\/IPTA.2012.6469525"},{"key":"6_CR8","unstructured":"Chi, P.H., Scott, G., Shyu, C.R.: A Fast Protein Structure Retrieval System Using Image Based Distance Matrices and Multidimensional Index. International Journal of Software Engineering and Knowledge Engineering, Special Issue on Software and Knowledge Engineering Support in Bioinformatics, 522\u2013532 (2004)"},{"key":"6_CR9","unstructured":"Chionh, C.H., Huang, Z., Tan, K.L., Yao, Z.: Augmenting SSEs with Structural Properties for Rapid Protein Structure Comparison. In: Proc. of the Third IEEE Symposium on Bioinformatics and Bioengineering, pp. 341\u2013348 (2003)"},{"issue":"1","key":"6_CR10","doi-asserted-by":"publisher","first-page":"11","DOI":"10.1145\/361237.361242","volume":"15","author":"R.O. Duda","year":"1972","unstructured":"Duda, R.O., Hart, P.E.: Use of the Hough Transformation to Detect Lines and Curves in Pictures. Comm. ACM\u00a015(1), 11\u201315 (1972)","journal-title":"Comm. ACM"},{"issue":"20","key":"6_CR11","doi-asserted-by":"publisher","first-page":"11207","DOI":"10.1073\/pnas.2034522100","volume":"100","author":"D. Eisenberg","year":"2003","unstructured":"Eisenberg, D.: The Discovery of the alpha-helix and beta-sheet, the Principal Structural Features of Proteins. Proc. of the National Academy of Sciences of the United States of America\u00a0100(20), 11207\u201311210 (2003)","journal-title":"Proc. of the National Academy of Sciences of the United States of America"},{"key":"6_CR12","unstructured":"Hough, P.V.C.: Methods and Means for Recognizing Complex Patterns. US Patent 3069654 (1962)"},{"issue":"12","key":"6_CR13","doi-asserted-by":"publisher","first-page":"2577","DOI":"10.1002\/bip.360221211","volume":"22","author":"W. Kabsch","year":"1983","unstructured":"Kabsch, W., Sander, C.: Dictionary of Protein Secondary Structure: Pattern Recognition of Hydrogen-bonded and Geometrical Features. Biopolymers\u00a022(12), 2577\u20132637 (1983)","journal-title":"Biopolymers"},{"key":"6_CR14","doi-asserted-by":"publisher","first-page":"2256","DOI":"10.1107\/S0907444904026460","volume":"D60","author":"E. Krissinel","year":"2004","unstructured":"Krissinel, E., Henrick, K.: Secondary-structure Matching (SSM), a New Tool for Fast Protein Structure Alignment in Three Dimensions. International Union of Cyrstallography, Acta. Cryst.\u00a0D60, 2256\u20132268 (2004)","journal-title":"International Union of Cyrstallography, Acta. Cryst."},{"key":"6_CR15","unstructured":"Naik, S.K., Murthy, C.A.: Hough Transform for Region Extraction in Color Images. In: Proceedings of ICVGIP, pp. 252\u2013257 (2004)"},{"key":"6_CR16","doi-asserted-by":"publisher","first-page":"21","DOI":"10.1016\/0031-3203(77)90027-9","volume":"9","author":"H. Wechsler","year":"1977","unstructured":"Wechsler, H., Sklansky, J.: Automatic Detection of Ribs in Chest Radiographs. Pattern Recognition\u00a09, 21\u201330 (1977)","journal-title":"Pattern Recognition"},{"issue":"1","key":"6_CR17","doi-asserted-by":"publisher","first-page":"53","DOI":"10.1186\/1472-6807-7-53","volume":"7","author":"E. Zotenko","year":"2007","unstructured":"Zotenko, E., Dogan, R.I., Wilbur, W.J., O\u2019Leary, D.P., Przytycka, T.M.: Structural Footprinting in Protein Structure Comparison: The Impact of Structural Fragments. BMC Structural Biology\u00a07(1), 53 (2007)","journal-title":"BMC Structural Biology"},{"key":"6_CR18","unstructured":"http:\/\/www.rcsb.org\/pdb\/"}],"container-title":["Lecture Notes in Computer Science","Computational Intelligence Methods for Bioinformatics and Biostatistics"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-642-38342-7_6","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,4,30]],"date-time":"2025-04-30T10:53:34Z","timestamp":1746010414000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-642-38342-7_6"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013]]},"ISBN":["9783642383410","9783642383427"],"references-count":18,"URL":"https:\/\/doi.org\/10.1007\/978-3-642-38342-7_6","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2013]]}}}