{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,5,23]],"date-time":"2025-05-23T12:49:07Z","timestamp":1748004547802},"publisher-location":"Berlin, Heidelberg","reference-count":19,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783642413971"},{"type":"electronic","value":"9783642413988"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2013]]},"DOI":"10.1007\/978-3-642-41398-8_10","type":"book-chapter","created":{"date-parts":[[2013,10,15]],"date-time":"2013-10-15T05:09:30Z","timestamp":1381813770000},"page":"104-115","source":"Crossref","is-referenced-by-count":2,"title":["Integrating Multiple Studies of Wheat Microarray Data to Identify Treatment-Specific Regulatory Networks"],"prefix":"10.1007","author":[{"given":"Valeria","family":"Bo","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Artem","family":"Lysenko","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mansoor","family":"Saqi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Dimah","family":"Habash","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Allan","family":"Tucker","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"issue":"1","key":"10_CR1","doi-asserted-by":"publisher","first-page":"39","DOI":"10.1186\/1742-4682-8-39","volume":"8","author":"F. Alakwaa","year":"2011","unstructured":"Alakwaa, F., Solouma, N., Kadah, Y.: Construction of gene regulatory networks using biclustering and bayesian networks. Theoretical Biology and Medical Modelling\u00a08(1), 39 (2011)","journal-title":"Theoretical Biology and Medical Modelling"},{"issue":"1","key":"10_CR2","doi-asserted-by":"publisher","first-page":"32","DOI":"10.1186\/1471-2105-11-32","volume":"11","author":"S.Y. Anvar","year":"2010","unstructured":"Anvar, S.Y., Tucker, A., et al.: The identification of informative genes from multiple datasets with increasing complexity. BMC Bioinformatics\u00a011(1), 32 (2010)","journal-title":"BMC Bioinformatics"},{"key":"10_CR3","unstructured":"Cheng, Y., Church, G.M.: Biclustering of expression data. In: Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology, vol.\u00a08, pp. 93\u2013103 (2000)"},{"issue":"suppl. 1","key":"10_CR4","doi-asserted-by":"crossref","first-page":"i84","DOI":"10.1093\/bioinformatics\/btg1010","volume":"19","author":"J.K. Choi","year":"2003","unstructured":"Choi, J.K., Yu, U., Kim, S., Yoo, O.J.: Combining multiple microarray studies and modeling interstudy variation. Bioinformatics\u00a019(suppl. 1), i84\u2013i90 (2003)","journal-title":"Bioinformatics"},{"issue":"3","key":"10_CR5","doi-asserted-by":"publisher","first-page":"432","DOI":"10.1093\/biostatistics\/kxm045","volume":"9","author":"J. Friedman","year":"2008","unstructured":"Friedman, J., Hastie, T., Tibshirani, R.: Sparse inverse covariance estimation with the graphical lasso. Biostatistics\u00a09(3), 432\u2013441 (2008)","journal-title":"Biostatistics"},{"issue":"3-4","key":"10_CR6","doi-asserted-by":"publisher","first-page":"601","DOI":"10.1089\/106652700750050961","volume":"7","author":"N. Friedman","year":"2000","unstructured":"Friedman, N., Linial, M., Nachman, I., Pe\u2019er, D.: Using bayesian networks to analyze expression data. Journal of Computational Biology\u00a07(3-4), 601\u2013620 (2000)","journal-title":"Journal of Computational Biology"},{"issue":"1","key":"10_CR7","first-page":"100","volume":"28","author":"J.A. Hartigan","year":"1979","unstructured":"Hartigan, J.A., Wong, M.A.: Algorithm as 136: A k-means clustering algorithm. Journal of the Royal Statistical Society. Series C (Applied Statistics)\u00a028(1), 100\u2013108 (1979)","journal-title":"Journal of the Royal Statistical Society. Series C (Applied Statistics)"},{"issue":"3","key":"10_CR8","first-page":"197","volume":"20","author":"D. Heckerman","year":"1995","unstructured":"Heckerman, D., Geiger, D., Chickering, D.M.: Learning bayesian networks: The combination of knowledge and statistical data. Machine Learning\u00a020(3), 197\u2013243 (1995)","journal-title":"Machine Learning"},{"key":"10_CR9","doi-asserted-by":"crossref","unstructured":"H\u00f8jsgaard, S.: Graphical independence networks with the grain package for r (2012)","DOI":"10.18637\/jss.v046.i10"},{"issue":"4","key":"10_CR10","doi-asserted-by":"publisher","first-page":"703","DOI":"10.1101\/gr.648603","volume":"13","author":"Y. Kluger","year":"2003","unstructured":"Kluger, Y., Basri, R., Chang, J.T., Gerstein, M.: Spectral biclustering of microarray data: coclustering genes and conditions. Genome Research\u00a013(4), 703\u2013716 (2003)","journal-title":"Genome Research"},{"issue":"1","key":"10_CR11","doi-asserted-by":"publisher","first-page":"203","DOI":"10.1186\/1471-2105-12-203","volume":"12","author":"A. Lysenko","year":"2011","unstructured":"Lysenko, A., Defoin-Platel, M., Hassani-Pak, K., Taubert, J., Hodgman, C., Rawlings, C.J., Saqi, M.: Assessing the functional coherence of modules found in multiple-evidence networks from arabidopsis. BMC Bioinformatics\u00a012(1), 203 (2011)","journal-title":"BMC Bioinformatics"},{"issue":"1","key":"10_CR12","doi-asserted-by":"publisher","first-page":"24","DOI":"10.1109\/TCBB.2004.2","volume":"1","author":"S.C. Madeira","year":"2004","unstructured":"Madeira, S.C., Oliveira, A.L.: Biclustering algorithms for biological data analysis: a survey. IEEE\/ACM Transactions on Computational Biology and Bioinformatics\u00a01(1), 24\u201345 (2004)","journal-title":"IEEE\/ACM Transactions on Computational Biology and Bioinformatics"},{"key":"10_CR13","doi-asserted-by":"crossref","unstructured":"Scutari, M.: Learning bayesian networks with the bnlearn r package. arXiv preprint arXiv:0908.3817 (2009)","DOI":"10.18637\/jss.v035.i03"},{"key":"10_CR14","unstructured":"Scutari, M., Scutari, M.M.: Package bnlearn (2012)"},{"issue":"2","key":"10_CR15","doi-asserted-by":"publisher","first-page":"166","DOI":"10.1038\/ng1165","volume":"34","author":"E. Segal","year":"2003","unstructured":"Segal, E., Shapira, M., Regev, A., Pe\u2019er, D., Botstein, D., Koller, D., Friedman, N.: Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data. Nature Genetics\u00a034(2), 166\u2013176 (2003)","journal-title":"Nature Genetics"},{"issue":"6","key":"10_CR16","doi-asserted-by":"publisher","first-page":"914","DOI":"10.1016\/j.jbi.2008.01.011","volume":"41","author":"E. Steele","year":"2008","unstructured":"Steele, E., Tucker, A.: Consensus and meta-analysis regulatory networks for combining multiple microarray gene expression datasets. Journal of Biomedical Informatics\u00a041(6), 914\u2013926 (2008)","journal-title":"Journal of Biomedical Informatics"},{"key":"10_CR17","doi-asserted-by":"crossref","unstructured":"Swift, S., Tucker, A., Vinciotti, V., Martin, N., Orengo, C., Liu, X., Kellam, P.: Consensus clustering and functional interpretation of gene-expression data. Genome Biology\u00a05(11), R94 (2004)","DOI":"10.1186\/gb-2004-5-11-r94"},{"issue":"6","key":"10_CR18","doi-asserted-by":"publisher","first-page":"914","DOI":"10.1111\/j.1365-313X.2004.02016.x","volume":"37","author":"O. Thimm","year":"2004","unstructured":"Thimm, O., Bl\u00e4sing, O., Gibon, Y., Nagel, A., Meyer, S., Kr\u00fcger, P., Selbig, J., M\u00fcller, L.A., Rhee, S.Y., Stitt, M.: mapman: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. The Plant Journal\u00a037(6), 914\u2013939 (2004)","journal-title":"The Plant Journal"},{"key":"10_CR19","doi-asserted-by":"crossref","unstructured":"Zhang, J., Lu, K., Xiang, Y., Islam, M., Kotian, S., Kais, Z., Lee, C., Arora, M., Liu, H., Parvin, J.D.: et\u00a0al. Weighted frequent gene co-expression network mining to identify genes involved in genome stability. PLoS Computational Biology\u00a08(8), e1002656 (2012)","DOI":"10.1371\/journal.pcbi.1002656"}],"container-title":["Lecture Notes in Computer Science","Advances in Intelligent Data Analysis XII"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-642-41398-8_10","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,7,5]],"date-time":"2023-07-05T06:01:58Z","timestamp":1688536918000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-642-41398-8_10"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013]]},"ISBN":["9783642413971","9783642413988"],"references-count":19,"URL":"https:\/\/doi.org\/10.1007\/978-3-642-41398-8_10","relation":{},"ISSN":["0302-9743","1611-3349"],"issn-type":[{"type":"print","value":"0302-9743"},{"type":"electronic","value":"1611-3349"}],"subject":[],"published":{"date-parts":[[2013]]}}}