{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,10]],"date-time":"2024-09-10T17:14:09Z","timestamp":1725988449482},"publisher-location":"Singapore","reference-count":30,"publisher":"Springer Singapore","isbn-type":[{"type":"print","value":"9789811314704"},{"type":"electronic","value":"9789811314711"}],"license":[{"start":{"date-parts":[[2018,1,1]],"date-time":"2018-01-01T00:00:00Z","timestamp":1514764800000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2018]]},"DOI":"10.1007\/978-981-13-1471-1_3","type":"book-chapter","created":{"date-parts":[[2018,8,18]],"date-time":"2018-08-18T01:33:12Z","timestamp":1534555992000},"page":"55-78","update-policy":"http:\/\/dx.doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":1,"title":["Incorporating Gene Ontology Information in Gene Expression Data Clustering Using Multiobjective Evolutionary Optimization: Application in Yeast Cell Cycle Data"],"prefix":"10.1007","author":[{"given":"Anirban","family":"Mukhopadhyay","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2018,8,19]]},"reference":[{"key":"3_CR1","doi-asserted-by":"publisher","first-page":"503","DOI":"10.1038\/35000501","volume":"403","author":"AA Alizadeh","year":"2000","unstructured":"A.A. Alizadeh, M.B. Eisen, R. Davis, C. Ma, I. Lossos, A. Rosenwald, J. Boldrick, R. Warnke, R. Levy, W. Wilson, M. Grever, J. Byrd, D. Botstein, P.O. Brown, L.M. Straudt, Distinct types of diffuse large B-cell lymphomas identified by gene expression profiling. Nature 403, 503\u2013511 (2000)","journal-title":"Nature"},{"key":"3_CR2","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1038\/75556","volume":"25","author":"M Ashburner","year":"2000","unstructured":"M. Ashburner, C.A. Ball, J.A. Blake, D. Botstein, H. Butler, J.M. Cherry, A.P. Davis, K. Dolinski, S.S. Dwight, J.T. Eppig, M.A. Harris, D.P. Hill, L. Issel-Tarver, A. Kasarskis, S. Lewis, J.C. Matese, J.E. Richardson, M. Ringwald, G.M. Rubin, G. Sherlock, Gene Ontology: tool for the unification of biology. The gene ontology consortium. Na. Genet. 25, 25\u201329 (2000)","journal-title":"Na. Genet."},{"key":"3_CR3","doi-asserted-by":"crossref","unstructured":"S.\u00a0Bandyopadhyay, U.\u00a0Maulik, J.T.L. Wang, Analysis of Biological Data: A Soft Computing Approach (World Scientific, 2007)","DOI":"10.1142\/6493"},{"issue":"21","key":"3_CR4","doi-asserted-by":"publisher","first-page":"2859","DOI":"10.1093\/bioinformatics\/btm418","volume":"23","author":"S Bandyopadhyay","year":"2007","unstructured":"S. Bandyopadhyay, A. Mukhopadhyay, U. Maulik, An improved algorithm for clustering gene expression data. Bioinformatics 23(21), 2859\u20132865 (2007)","journal-title":"Bioinformatics"},{"issue":"3","key":"3_CR5","doi-asserted-by":"publisher","first-page":"129","DOI":"10.1007\/BF03325101","volume":"1","author":"CA Coello Coello","year":"1999","unstructured":"C.A. Coello Coello, A comprehensive survey of evolutionary-based multiobjective optimization techniques. Knowl. Inf. Syst. 1(3), 129\u2013156 (1999)","journal-title":"Knowl. Inf. Syst."},{"issue":"1","key":"3_CR6","doi-asserted-by":"publisher","first-page":"28","DOI":"10.1109\/MCI.2006.1597059","volume":"1","author":"C Coello Coello","year":"2006","unstructured":"C. Coello Coello, Evolutionary multiobjective optimization: a historical view of the field. IEEE Comput. Intell. Mag. 1(1), 28\u201336 (2006)","journal-title":"IEEE Comput. Intell. Mag."},{"key":"3_CR7","doi-asserted-by":"crossref","unstructured":"K.\u00a0Deb, S.\u00a0Agrawal, A.\u00a0Pratap, T.\u00a0Meyarivan, A fast elitist non-dominated sorting genetic algorithm for multi-objective optimization: NSGA-II, in Proceedings of the Parallel Problem Solving from Nature VI Conference. Lecture Notes in Computer Science No. 1917 (Springer, 2000), pp.\u00a0849\u2013858","DOI":"10.1007\/3-540-45356-3_83"},{"key":"3_CR8","volume-title":"Multi-Objective Optimization Using Evolutionary Algorithms","author":"K Deb","year":"2001","unstructured":"K. Deb, Multi-Objective Optimization Using Evolutionary Algorithms (Wiley, England, 2001)"},{"key":"3_CR9","doi-asserted-by":"publisher","first-page":"182","DOI":"10.1109\/4235.996017","volume":"6","author":"K Deb","year":"2002","unstructured":"K. Deb, A. Pratap, S. Agrawal, T. Meyarivan, A fast and elitist multiobjective genetic algorithm: NSGA-II. IEEE Trans. Evol. Comput. 6, 182\u2013197 (2002)","journal-title":"IEEE Trans. Evol. Comput."},{"key":"3_CR10","doi-asserted-by":"crossref","unstructured":"M.B. Eisen, P.T. Spellman, P.O. Brown, D. Botstein, Cluster analysis and display of genome-wide expression patterns, in Proceedings of the National Academy of Sciences, (USA) (1998), pp. 14863\u201314868","DOI":"10.1073\/pnas.95.25.14863"},{"issue":"19","key":"3_CR11","doi-asserted-by":"publisher","first-page":"10781","DOI":"10.1073\/pnas.181597298","volume":"98","author":"K Fellenberg","year":"2001","unstructured":"K. Fellenberg, N.C. Hauser, B. Brors, A. Neutzner, J.D. Hoheisel, M. Vingron, Correspondence analysis applied to microarray data. Proc. Natl. Acad. Sci. 98(19), 10781\u201310786 (2001)","journal-title":"Proc. Natl. Acad. Sci."},{"key":"3_CR12","volume-title":"Algorithms for Clustering Data","author":"AK Jain","year":"1988","unstructured":"A.K. Jain, R.C. Dubes, Algorithms for Clustering Data (Prentice-Hall, Englewood Cliffs, NJ, 1988)"},{"key":"3_CR13","doi-asserted-by":"publisher","first-page":"27","DOI":"10.1093\/nar\/28.1.27","volume":"28","author":"M Kanehisa","year":"2000","unstructured":"M. Kanehisa, S. Goto, KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 28, 27\u201330 (2000)","journal-title":"Nucleic Acids Res."},{"key":"3_CR14","unstructured":"D.\u00a0Lin, An information-theoretic definition of similarity, in Proceedings of the 15th International Conference on Machine Learning (ICML-98) (Morgan Kaufmann Publishers Inc., San Francisco, CA, USA, 1998), pp.\u00a0296\u2013304"},{"key":"3_CR15","doi-asserted-by":"publisher","first-page":"827","DOI":"10.1038\/35015701","volume":"405","author":"DJ Lockhart","year":"2000","unstructured":"D.J. Lockhart, E.A. Winzeler, Genomics, gene expreesion and DNA arrays. Nature 405, 827\u2013836 (2000)","journal-title":"Nature"},{"key":"3_CR16","doi-asserted-by":"crossref","unstructured":"U.\u00a0Maulik, A.\u00a0Mukhopadhyay, S.\u00a0Bandyopadhyay, Combining pareto-optimal clusters using supervised learning for identifying co-expressed genes. BMC Bioinform. 10(27) (2009)","DOI":"10.1186\/1471-2105-10-27"},{"issue":"12","key":"3_CR17","doi-asserted-by":"publisher","first-page":"1650","DOI":"10.1109\/TPAMI.2002.1114856","volume":"24","author":"U Maulik","year":"2002","unstructured":"U. Maulik, S. Bandyopadhyay, Performance evaluation of some clustering algorithms and validity indices. IEEE Trans. Pattern Anal. Mach. Intell. 24(12), 1650\u20131654 (2002)","journal-title":"IEEE Trans. Pattern Anal. Mach. Intell."},{"key":"3_CR18","doi-asserted-by":"crossref","unstructured":"A.\u00a0Mukhopadhyay, U.\u00a0Maulik, Unsupervised pixel classification in satellite imagery using multiobjective fuzzy clustering combined with SVM classifier. IEEE Trans. Geosci. Remote Sens. (in press)","DOI":"10.1109\/TGRS.2008.2008182"},{"key":"3_CR19","doi-asserted-by":"crossref","unstructured":"A.\u00a0Mukhopadhyay, U.\u00a0Maulik, S.\u00a0Bandyopadhyay, A survey of multiobjective evolutionary clustering. ACM Comput. Surv. 47, 61:1\u201361:46 (2015)","DOI":"10.1145\/2742642"},{"key":"3_CR20","unstructured":"A.\u00a0Mukhopadhyay, U.\u00a0Maulik, S.\u00a0Bandyopadhyay, Multi-objective genetic algorithm based fuzzy clustering of categorical attributes. IEEE Trans. Evol. Comput. (in press)"},{"key":"3_CR21","doi-asserted-by":"crossref","unstructured":"A.\u00a0Mukhopadhyay, U.\u00a0Maulik, S.\u00a0Bandyopadhyay, B.\u00a0Brors, GOGA: GO-driven genetic algorithm-based fuzzy clustering of gene expression data, in 2010 International Conference on Systems in Medicine and Biology (ICSMB) (IEEE, 2010), pp.\u00a0221\u2013226","DOI":"10.1109\/ICSMB.2010.5735376"},{"issue":"1","key":"3_CR22","doi-asserted-by":"publisher","first-page":"4","DOI":"10.1109\/TEVC.2013.2290086","volume":"18","author":"A Mukhopadhyay","year":"2014","unstructured":"A. Mukhopadhyay, U. Maulik, S. Bandyopadhyay, C.A.C. Coello, A survey of multiobjective evolutionary algorithms for data mining: part I. IEEE Trans. Evol. Comput. 18(1), 4\u201319 (2014a)","journal-title":"IEEE Trans. Evol. Comput."},{"issue":"1","key":"3_CR23","doi-asserted-by":"publisher","first-page":"20","DOI":"10.1109\/TEVC.2013.2290082","volume":"18","author":"A Mukhopadhyay","year":"2014","unstructured":"A. Mukhopadhyay, U. Maulik, S. Bandyopadhyay, C.A.C. Coello, Survey of multiobjective evolutionary algorithms for data mining: part II. IEEE Trans. Evol. Comput. 18(1), 20\u201335 (2014b)","journal-title":"IEEE Trans. Evol. Comput."},{"key":"3_CR24","doi-asserted-by":"crossref","unstructured":"K.\u00a0Ovaska, M.\u00a0Laakso, S.\u00a0Hautaniemi, Fast gene ontology based clustering for microarray experiments. BioData Min. 1(11) (2008)","DOI":"10.1186\/1756-0381-1-11"},{"key":"3_CR25","unstructured":"C.\u00a0Pesquita, D.\u00a0Faria, H.B.A.O. Falco, F.M. Couto, An information-theoretic definition of similarity, in Proceedings of the 10th Annual Bio-Ontologies Meeting (Bio-Ontologies-07) (2007), pp.\u00a037\u201340"},{"key":"3_CR26","unstructured":"P.\u00a0Resnik, Using information content to evaluate semantic similarity in a taxonomy, in Proceedings of the 14th International Joint Conference on Artificial Intelligence (IJCAI-95) (Morgan Kaufmann Publishers Inc., San Francisco, CA, USA, 1995), pp.\u00a0448\u2013453"},{"key":"3_CR27","doi-asserted-by":"crossref","unstructured":"R.\u00a0Shamir, A.\u00a0Maron-Katz, A.\u00a0Tanay, C.\u00a0Linhart, I.\u00a0Steinfeld, R.\u00a0Sharan, Y.\u00a0Shiloh, R.\u00a0Elkon, EXPANDER\u2014an integrative program suite for microarray data analysis. BMC Bioinform. 6(232) (2005)","DOI":"10.1186\/1471-2105-6-232"},{"key":"3_CR28","doi-asserted-by":"publisher","first-page":"1787","DOI":"10.1093\/bioinformatics\/btg232","volume":"19","author":"R Sharan","year":"2003","unstructured":"R. Sharan, M.-K. Adi, R. Shamir, CLICK and EXPANDER: a system for clustering and visualizing gene expression data. Bioinformatics 19, 1787\u20131799 (2003)","journal-title":"Bioinformatics"},{"key":"3_CR29","unstructured":"E.\u00a0Zitzler, M.\u00a0Laumanns, L.\u00a0Thiele, SPEA2: Improving the Strength Pareto Evolutionary Algorithm, Technical Report 103, Gloriastrasse 35, CH-8092 Zurich, Switzerland (2001)"},{"key":"3_CR30","unstructured":"E.\u00a0Zitzler, L.\u00a0Thiele, An Evolutionary Algorithm for Multiobjective Optimization: The Strength Pareto Approach, Technical Report\u00a043, Gloriastrasse 35, CH-8092 Zurich, Switzerland (1998)"}],"container-title":["Multi-Objective Optimization"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-981-13-1471-1_3","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,10,22]],"date-time":"2019-10-22T10:30:34Z","timestamp":1571740234000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-981-13-1471-1_3"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018]]},"ISBN":["9789811314704","9789811314711"],"references-count":30,"URL":"https:\/\/doi.org\/10.1007\/978-981-13-1471-1_3","relation":{},"subject":[],"published":{"date-parts":[[2018]]}}}