{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,25]],"date-time":"2026-09-25T00:44:41Z","timestamp":1790297081414,"version":"4.1.0"},"reference-count":43,"publisher":"Springer Science and Business Media LLC","issue":"3","license":[{"start":{"date-parts":[[2019,12,17]],"date-time":"2019-12-17T00:00:00Z","timestamp":1576540800000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"},{"start":{"date-parts":[[2019,12,17]],"date-time":"2019-12-17T00:00:00Z","timestamp":1576540800000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"funder":[{"name":"\u201cPHC Utique\u201d program of the French Ministry of Foreign Affairs and Ministry of higher education and research and the Tunisian Ministry of higher education and scientific research","award":["CMCU project number 18G1139"],"award-info":[{"award-number":["CMCU project number 18G1139"]}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["J Digit Imaging"],"published-print":{"date-parts":[[2020,6]]},"DOI":"10.1007\/s10278-019-00303-2","type":"journal-article","created":{"date-parts":[[2019,12,17]],"date-time":"2019-12-17T19:03:02Z","timestamp":1576609382000},"page":"563-573","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":11,"title":["Ontologies for Liver Diseases Representation: A Systematic Literature Review"],"prefix":"10.1007","volume":"33","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-5311-0375","authenticated-orcid":false,"given":"Rim","family":"Messaoudi","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Achraf","family":"Mtibaa","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Antoine","family":"Vacavant","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fa\u00efez","family":"Gargouri","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Faouzi","family":"Jaziri","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2019,12,17]]},"reference":[{"key":"303_CR1","doi-asserted-by":"publisher","first-page":"433","DOI":"10.1016\/j.jvir.2008.10.022","volume":"20","author":"CP Kundu","year":"2009","unstructured":"Kundu CP, Itkin S, Gervais M, Krishnamurthy DA, Wallace VN, Cardella JF, Rubin DL, Langlotz CP: The IR Radlex project: an interventional radiology lexicon\u2014a collaborative project of the Radiological Society of North America and the Society of Interventional Radiology. J Vasc Interv Radiol 20:433\u2013435, 2009","journal-title":"J Vasc Interv Radiol"},{"key":"303_CR2","doi-asserted-by":"publisher","first-page":"267","DOI":"10.1093\/nar\/gkh061","volume":"37","author":"O Bodenreider","year":"2004","unstructured":"Bodenreider O: The unified medical language system (UMLS): integrating biomedical terminology. Nucleic Acids Res 37:267\u2013270, 2004","journal-title":"Nucleic Acids Res"},{"key":"303_CR3","unstructured":"Kitchenham B: Procedures for performing systematic reviews. Keele University, Tech. Rep, 2004"},{"key":"303_CR4","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1016\/j.compmedimag.2016.01.001","volume":"49","author":"A Kumar","year":"2016","unstructured":"Kumar A, Dyer S, Kim J, Li C, Leong PHW, Fulham M, Feng D: Adapting content-based image retrieval techniques for the semantic annotation of medical images. Comput Med Imaging Graph 49:37\u201345, 2016","journal-title":"Comput Med Imaging Graph"},{"key":"303_CR5","doi-asserted-by":"crossref","unstructured":"M\u00f6ller M, Regel S, Sintek M: Radsem: semantic annotation and retrieval for medical images. In: The Semantic Web: research and applications Springer 21-35, 2009","DOI":"10.1007\/978-3-642-02121-3_6"},{"key":"303_CR6","doi-asserted-by":"publisher","first-page":"1669","DOI":"10.1109\/TMI.2014.2321347","volume":"33","author":"A Depeursinge","year":"2014","unstructured":"Depeursinge A, Kurtz C, Beaulieu C, Napel S, Rubin D: Predicting visual semantic descriptive terms from radiological image data: preliminary results with liver lesions in CT. IEEE Trans Med Imaging 33:1669\u20131676, 2014","journal-title":"IEEE Trans Med Imaging"},{"key":"303_CR7","first-page":"03","volume":"7967","author":"S Seifert","year":"2011","unstructured":"Seifert S, Thoma M, Stegmaier F, Hammon M, Kramer M, Huber M, Kriegel HP, Cavallaro A, Comaniciu D: Combined semantic and similarity search in medical image databases. SPIE Med Imaging 7967:03\u201310, 2011","journal-title":"SPIE Med Imaging"},{"key":"303_CR8","doi-asserted-by":"publisher","first-page":"1929","DOI":"10.1016\/j.fss.2008.02.011","volume":"159","author":"C Hudelot","year":"2008","unstructured":"Hudelot C, Atif J, Bloch I: Fuzzy spatial relation ontology for image interpretation. Fuzzy Sets Syst 159:1929\u20131951, 2008","journal-title":"Fuzzy Sets Syst"},{"key":"303_CR9","doi-asserted-by":"publisher","first-page":"116","DOI":"10.1007\/s10278-018-0115-6","volume":"32","author":"R Messaoudi","year":"2019","unstructured":"Messaoudi R, Jaziri F, Mtibaa A, Grand-Brochier M, Mohamed Ali H, Ali A, Fourati H, Chabrot P, Gargouri F, Vacavant A: Ontology-based approach for liver cancer diagnosis and treatment. J Digit Imaging 32:116\u2013130, 2019","journal-title":"J Digit Imaging"},{"key":"303_CR10","doi-asserted-by":"publisher","first-page":"279","DOI":"10.1016\/j.jbi.2014.07.008","volume":"52","author":"B Gibaud","year":"2014","unstructured":"Gibaud B, Forestier G, Benoit-Cattin H, Cervenansky F, Clarysse P, Friboulet D, Gaignard A, Hugonnard P, Lartizien C, Liebgott H, Montagnat J, Tabary J, Glatard T: OntoVIP: an ontology for the annotation of object models used for medical image simulation. J Biomed Inform 52:279\u2013292, 2014","journal-title":"J Biomed Inform"},{"key":"303_CR11","doi-asserted-by":"publisher","first-page":"129","DOI":"10.1016\/j.jbi.2016.12.006","volume":"66","author":"MN Gurcan","year":"2017","unstructured":"Gurcan MN, Tomaszewski J, Overton JA, Doyle S, Ruttenberg A, Smith B: Developing the quantitative histopathology image ontology (QHIO): a case study using the hot spot detection problem. J Biomed Inform 66:129\u2013135, 2017","journal-title":"J Biomed Inform"},{"key":"303_CR12","first-page":"1","volume-title":"Advances in Visual Computing","author":"Ahlem Othmani","year":"2010","unstructured":"Othmani A, Meziat C, Lom\u00e9nie N: Ontology-driven image analysis for histopathological images. Int. Symposium on Visual Computing ISVC\u201910, Lecture Notes in Computer Science, vol 6453. Springer, Berlin, Heidelberg 1\u201312, 2010"},{"key":"303_CR13","doi-asserted-by":"publisher","first-page":"4","DOI":"10.1007\/s10278-016-9916-7","volume":"30","author":"KH Hwang","year":"2017","unstructured":"Hwang KH, Lee H, Koh G, Willre D, Rubin DL: Building and querying RDF\/OWL database of semantically annotated nuclear medicine images. J Digit Imaging 30:4\u201310, 2017","journal-title":"J Digit Imaging"},{"key":"303_CR14","unstructured":"Rubin DL, Mongkolwat P, Kleper V, Supekar K, Channin DS: Medical imaging on the semantic web: annotation and image markup. in AAAI Spring Symposium: Semantic Scientific Knowledge Integration 93-98, 2008"},{"key":"303_CR15","first-page":"15","volume":"10","author":"K Parminder","year":"2015","unstructured":"Parminder K, Khamparia A: Diagnosis of liver cancer ontology using SPARQL. Int J Appl Eng Res 10:15\u201318, 2015","journal-title":"Int J Appl Eng Res"},{"key":"303_CR16","unstructured":"Alfonse M, Aref MM, Abdel-Badeeh MS: Ontology-based knowledge representation for liver Cancer. International eHealth: Telemedicine and Health ICT Forum for Educational, Networking and Business, Luxembourg 821-825, 2012"},{"key":"303_CR17","doi-asserted-by":"crossref","unstructured":"Franca F, Schulz S, Bronsert P, Novais P, Boeker M: Feasibility of an ontology driven tumor-node-metastasis classifier application: a study on colorectal cancer, in Innovations in Intelligent SysTems and Applications (INISTA), 2015 International Symposium on 7 pages, 2015","DOI":"10.1109\/INISTA.2015.7276757"},{"key":"303_CR18","doi-asserted-by":"crossref","unstructured":"Luque EF, Rubin DL, Moreira DA: Automatic classification of cancer tumors using image annotations and ontologies. In Proceedings - IEEE Symposium on Computer-Based Medical Systems 368-369, 2015","DOI":"10.1109\/CBMS.2015.83"},{"key":"303_CR19","doi-asserted-by":"crossref","unstructured":"Abdel-Badeeh MS, Mostafa MA, Moawed IF, Alfonse M, AlMarzoki G:Ontological engineering in medical informatics. International journal of genomics, proteomics, Metab Bioinform 1:9\u201313, 2016","DOI":"10.19070\/2577-4336-160002"},{"key":"303_CR20","first-page":"89","volume":"36","author":"IF Moawad","year":"2012","unstructured":"Moawad IF, AlMarzoqi G, Abdel-Badeeh MS: Building OBR based OWL ontology for viral hepatitis. Egypt Comput Sci J 36:89\u201398, 2012","journal-title":"Egypt Comput Sci J"},{"key":"303_CR21","doi-asserted-by":"crossref","unstructured":"AL-Marzoqi G, Alfonse M, Moawad FI, Roushdy M: A survey on applying ontological engineering: approach for hepatobiliary system diseases. The 7th International Conference on Information Technology 370\u2013375, 2015","DOI":"10.15849\/icit.2015.0071"},{"key":"303_CR22","doi-asserted-by":"crossref","unstructured":"ALMarzoqi G, Moawad IF, Abdel-Badeeh MS: Web service based approach for viral hepatitis ontology sharing and diagnosing. AMLTA 257-266, 2012","DOI":"10.1007\/978-3-642-35326-0_26"},{"key":"303_CR23","first-page":"55","volume":"6","author":"M Alfonse","year":"2014","unstructured":"Alfonse M, Mahmoud Aref M, Abdel-Badeeh MS: An ontology-based system for cancer diseases knowledge management. IJ Inf Eng Electron Bus 6:55\u201363, 2014","journal-title":"IJ Inf Eng Electron Bus"},{"key":"303_CR24","unstructured":"Masci AM, Roach J, de Bono B, Grenon P, Cowell L: Bridging multiple ontologies: representation of the liver immune response. International Conference on Biomedical Ontologies (ICBO), Buffalo,NY, USA, Working with multiple Biomedical Ontologies Workshop, 393\u2013398, 2011"},{"key":"303_CR25","doi-asserted-by":"crossref","unstructured":"Yunzhi C, Lu H, Shapiro L, Travillian RS, Lanjuan L: An approach to semantic query expansion system based on hepatitis ontology. J Biol Res Thessaloniki 23:11 pages, 2016","DOI":"10.1186\/s40709-016-0044-9"},{"issue":"2","key":"303_CR26","doi-asserted-by":"publisher","first-page":"51","DOI":"10.3109\/17538157.2011.590258","volume":"37","author":"Val\u00e9rie Bertaud-Gounot","year":"2011","unstructured":"Bertaud-Gounot V, Duvauferrier R, Burgun A: Ontology and medical diagnosis, Informatics for Health and Social Care 37:51\u201361, 2012","journal-title":"Informatics for Health and Social Care"},{"key":"303_CR27","unstructured":"Van Soest J, Lustberg T, Grittner D, Marshall MS, Persoon L, Nijsten B, Feltens P, Dekker A: Towards a semantic PACS: using semantic web technology to represent imaging data, Stud Health Technol Inform 205:166\u2013170, 2014"},{"key":"303_CR28","doi-asserted-by":"publisher","first-page":"749","DOI":"10.1007\/s11548-015-1187-0","volume":"10","author":"K M\u00e4rz","year":"2015","unstructured":"M\u00e4rz K, Hafezi M, Weller T, Saffari A, Nolden M, Fard N, Majlesara A, Zelzer S, Maleshkova M, Volovyk M, Gharabaghi N, Wagner M, Emami G, Engelhardt S, Fetzer A, Kenngott H, Rezai N, Rettinger A, Studer R, Mehrabi A, Maier-Hein L: Toward knowledge-based liver surgery: holistic information processing for surgical decision support. Int J Comput Assist Radiol Surg 10:749\u2013759, 2015","journal-title":"Int J Comput Assist Radiol Surg"},{"key":"303_CR29","unstructured":"Marvasti NB, K\u00f6kciyan N, T\u00fcrkay R, Yazici A, Yolum P, \u00dcsk\u00fcdarli S, Acar B: ImageCLEF liver CT image annotation Task 2014. in: CLEF 2014 Working Notes, vol. 1180 of CEUR Workshop Proceedings, 329\u2013340, 2014"},{"key":"303_CR30","doi-asserted-by":"crossref","unstructured":"Rold\u00e1n-Garc\u00eda MM, Uskudarli S, Marvasti NB, Acar B, Aldana-Montes JF: Towards an ontology-driven clinical experience sharing ecosystem: demonstration with liver cases, Expert Systems With Applications, 10 pages, 2018","DOI":"10.1016\/j.eswa.2018.02.001"},{"key":"303_CR31","doi-asserted-by":"publisher","first-page":"1239","DOI":"10.1111\/liv.12173","volume":"33","author":"Y Zhang","year":"2013","unstructured":"Zhang Y, Yang C, Wang S, Chen T, Li M, Wang X, Li D, Wang K, Ma J, Wu S, Zhang X, Zhu Y, Wu J, He F: LiverAtlas: a unique integrated knowledge database for systems-level research of liver and hepatic disease. Liver Int 33:1239\u20131248, 2013","journal-title":"Liver Int"},{"key":"303_CR32","doi-asserted-by":"publisher","first-page":"1180","DOI":"10.1016\/j.ajpath.2012.12.033","volume":"182","author":"Y Wang","year":"2013","unstructured":"Wang Y, Lin Z, Liu Z, Harris S, Kelly R, Zhang J, Ge W, Chen M, Borlak J, Tong W: A unifying ontology to integrate histological and clinical observations for drug-induce liver injury. Am J Pathol 182:1180\u20131187, 2013","journal-title":"Am J Pathol"},{"key":"303_CR33","doi-asserted-by":"publisher","first-page":"313","DOI":"10.1007\/978-3-319-98779-8_15","volume-title":"Clinical Research Informatics. Health Informatics","author":"KW Fung","year":"2019","unstructured":"Fung KW, Bodenreider O: Knowledge representation and ontologies. In: Richesson R, Andrews J Eds. Clinical Research Informatics. Health Informatics. Cham: Springer, 2019, pp. 313\u2013339"},{"key":"303_CR34","doi-asserted-by":"crossref","unstructured":"Chan LWC, Wong SC, Chiau CC, Chan TM, Tao L, Feng J, Chiu KWH: Association patterns of ontological features signify electronic health records in liver cancer. J Healthcare Eng 9 pages, 2017","DOI":"10.1155\/2017\/6493016"},{"key":"303_CR35","doi-asserted-by":"crossref","unstructured":"Messaoudi R, Labidi T, Vacavant A, Gargouri F, Grand-Brochier M, Amouri A, Fourati H, Mtibaa A, Jaziri F: An ontological model for analyzing liver cancer medical reports. EMCIS 2018. Lecture notes in business information processing. Springer 341: 369\u2013382, 2018","DOI":"10.1007\/978-3-030-11395-7_29"},{"key":"303_CR36","doi-asserted-by":"publisher","first-page":"179","DOI":"10.1016\/j.jbi.2016.10.005","volume":"64","author":"WW Yim","year":"2016","unstructured":"Yim WW, Kwan SW, Yetisgen M: Tumor reference resolution and characteristic extraction in radiology reports for liver cancer stage prediction. J Biomed Inform 64:179\u2013191, 2016","journal-title":"J Biomed Inform"},{"key":"303_CR37","doi-asserted-by":"publisher","first-page":"1363","DOI":"10.1109\/JBHI.2014.2298880","volume":"18","author":"N Kokciyan","year":"2014","unstructured":"Kokciyan N, Turkay R, Uskudarli S, Yolum P, Bakir B, Acar B: Semantic description of liver CT images: an ontological approach. IEEE J Biomed Health Inform 18:1363\u20131369, 2014","journal-title":"IEEE J Biomed Health Inform"},{"key":"303_CR38","unstructured":"Marwede D, Fielding M, Kahn T: RadiO: a prototype application ontology for radiology reporting tasks. AMIA Symposium Proceedings:513\u2013517, 2007"},{"key":"303_CR39","doi-asserted-by":"crossref","unstructured":"Starlinger J, Kittner M, Blankenstein O, Leser U: How to Improve Extraction from German Medical Records. it-Information Technology 8 pages, 2016","DOI":"10.1515\/itit-2016-0027"},{"key":"303_CR40","unstructured":"Harkema H, Roberts I, Gaizauskas R, Hepple M: Information extraction from clinical records. In: Cox SJ, Walker DW, editors. Proceedings of the UK escience all hands meeting 2005, Nottingham, UK 254-258, 2005"},{"key":"303_CR41","doi-asserted-by":"crossref","unstructured":"Oberkampf H, Zillner S, Overton JA, Bauer B, Cavallaro A, Uder M, Hammon M: Semantic representation of reported measurements in radiology. BMC Med Inform Decis Mak: 16:12 pages, 2016","DOI":"10.1186\/s12911-016-0248-9"},{"key":"303_CR42","doi-asserted-by":"publisher","first-page":"149","DOI":"10.1093\/jamia\/ocy161","volume":"26","author":"MT Finke","year":"2019","unstructured":"Finke MT, Filice RW, Kahn, Jr CE: Integrating ontologies of human diseases, phenotypes, and radiological diagnosis. J Am Med Inform Assoc 26:149\u2013154, 2019","journal-title":"J Am Med Inform Assoc"},{"key":"303_CR43","first-page":"677","volume":"3","author":"P Kaur","year":"2014","unstructured":"Kaur P, Khamparia A: Review on medical care ontologies. Int J Sci Res 3:677\u2013680, 2014","journal-title":"Int J Sci Res"}],"container-title":["Journal of Digital Imaging"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s10278-019-00303-2.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1007\/s10278-019-00303-2\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s10278-019-00303-2.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,10,8]],"date-time":"2022-10-08T18:38:38Z","timestamp":1665254318000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/s10278-019-00303-2"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,12,17]]},"references-count":43,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2020,6]]}},"alternative-id":["303"],"URL":"https:\/\/doi.org\/10.1007\/s10278-019-00303-2","relation":{},"ISSN":["0897-1889","1618-727X"],"issn-type":[{"value":"0897-1889","type":"print"},{"value":"1618-727X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2019,12,17]]},"assertion":[{"value":"17 December 2019","order":1,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}}]}}