{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,31]],"date-time":"2025-10-31T07:16:49Z","timestamp":1761895009739},"reference-count":20,"publisher":"Springer Science and Business Media LLC","issue":"2","license":[{"start":{"date-parts":[[2009,12,18]],"date-time":"2009-12-18T00:00:00Z","timestamp":1261094400000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["J Supercomput"],"published-print":{"date-parts":[[2011,11]]},"DOI":"10.1007\/s11227-009-0368-4","type":"journal-article","created":{"date-parts":[[2009,12,17]],"date-time":"2009-12-17T13:37:28Z","timestamp":1261057048000},"page":"253-260","source":"Crossref","is-referenced-by-count":16,"title":["Comparison of parallel multi-objective approaches to\u00a0protein structure prediction"],"prefix":"10.1007","volume":"58","author":[{"given":"J. C.","family":"Calvo","sequence":"first","affiliation":[]},{"given":"J.","family":"Ortega","sequence":"additional","affiliation":[]},{"given":"M.","family":"Anguita","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2009,12,18]]},"reference":[{"key":"368_CR1","first-page":"98","volume":"1","author":"J Knowles","year":"1999","unstructured":"Knowles J, Corne D (1999) The Pareto archived evolution strategy: a\u00a0new baseline algorithm for Pareto multiobjective optimisation. Proc Congr Evol Comput 1:98\u2013105","journal-title":"Proc Congr Evol Comput"},{"key":"368_CR2","doi-asserted-by":"crossref","first-page":"182","DOI":"10.1109\/4235.996017","volume":"6","author":"K Deb","year":"2002","unstructured":"Deb K, Pratap A, Agarwal S, Meyarivan T (2002) A fast and elitist multiobjective genetic algorithm: NSGA-II. IEEE Trans Evol Comput 6:182\u2013197","journal-title":"IEEE Trans Evol Comput"},{"key":"368_CR3","doi-asserted-by":"crossref","first-page":"342","DOI":"10.1016\/j.sbi.2008.02.004","volume":"18","author":"Y Zhang","year":"2008","unstructured":"Zhang Y (2008) Progress and challenges in protein structure prediction. Curr Opin Struct Biol 18:342\u2013348","journal-title":"Curr Opin Struct Biol"},{"key":"368_CR4","doi-asserted-by":"crossref","first-page":"139","DOI":"10.1098\/rsif.2005.0083","volume":"3","author":"V Cutello","year":"2006","unstructured":"Cutello V, Narcisi G, Nicosia G (2006) A multi-objective evolutionary approach to the protein structure prediction problem. J R Soc Interface 3:139\u2013151","journal-title":"J R Soc Interface"},{"key":"368_CR5","doi-asserted-by":"crossref","first-page":"223","DOI":"10.1126\/science.181.4096.223","volume":"181","author":"C Anfinsen","year":"1973","unstructured":"Anfinsen C (1973) Principles that govern the folding of protein chains. Science 181:223\u2013230","journal-title":"Science"},{"key":"368_CR6","doi-asserted-by":"crossref","first-page":"1029","DOI":"10.1073\/pnas.0407152101","volume":"102","author":"Y Zhang","year":"2005","unstructured":"Zhang Y, Skolnick J (2005) The protein structure prediction problem could be solved using the current PDB library. Proc Natl Acad Sci USA 102:1029\u20131034","journal-title":"Proc Natl Acad Sci USA"},{"key":"368_CR7","doi-asserted-by":"crossref","first-page":"279","DOI":"10.1109\/TCBB.2007.070203","volume":"4","author":"J Handl","year":"2007","unstructured":"Handl J, Kell D, Knowles J (2007) Multiobjective optimization in bioinformatics and computational biology. IEEE\/ACM Trans Comput Biol Bioinform (TCBB) 4:279\u2013292","journal-title":"IEEE\/ACM Trans Comput Biol Bioinform (TCBB)"},{"key":"368_CR8","doi-asserted-by":"crossref","first-page":"232","DOI":"10.1110\/ps.9.2.232","volume":"9","author":"L Rychlewski","year":"2000","unstructured":"Rychlewski L, Jaroszewski L, Li W, Godzik A (2000) Comparison of sequence profiles. Strategies for structural predictions using sequence information. Protein Science 9:232\u2013241","journal-title":"Protein Science"},{"key":"368_CR9","doi-asserted-by":"crossref","first-page":"7","DOI":"10.1147\/rd.521.0007","volume":"52","author":"S Raman","year":"2008","unstructured":"Raman S et al (2008) Advances in Rosetta protein structure prediction on massively parallel systems. IBM J Res Dev 52:7\u201317","journal-title":"IBM J Res Dev"},{"key":"368_CR10","doi-asserted-by":"crossref","first-page":"1868","DOI":"10.1126\/science.1113801","volume":"309","author":"P Bradley","year":"2005","unstructured":"Bradley P, Misura K, Baker D (2005) Toward high-resolution de\u00a0novo structure prediction for small proteins. Science 309:1868\u20131871","journal-title":"Science"},{"key":"368_CR11","doi-asserted-by":"crossref","first-page":"786","DOI":"10.1109\/TPDS.2006.110","volume":"17","author":"M Taufer","year":"2006","unstructured":"Taufer M, An C, Kerstens A, Brooks C (2006) Predictor@home: a\u00a0\u2018protein structure prediction supercomputer\u2019 based on global computing. IEEE Trans Parallel Distrib Syst 17:786\u2013796","journal-title":"IEEE Trans Parallel Distrib Syst"},{"key":"368_CR12","unstructured":"Anderson D (2004) Boinc: a system for public-resource computing and storage. In: Proc Fifth IEEE\/ACM Int\u2019l. Workshop Grid Computing"},{"key":"368_CR13","unstructured":"Coello CAC, Lamont GB, Veldhuizen DAV (2007) Evolutionary algorithms for solving multi-objective problems. SpringerLink e-books"},{"key":"368_CR14","doi-asserted-by":"crossref","first-page":"144","DOI":"10.1109\/TEVC.2003.810751","volume":"7","author":"DV Veldhuizen","year":"2003","unstructured":"Veldhuizen DV, Zidallis J, Lamont G (2003) Considerations in engineering parallel multiobjective evolutionary algorithms. IEEE Trans Evol Comput 7:144\u2013173","journal-title":"IEEE Trans Evol Comput"},{"key":"368_CR15","doi-asserted-by":"crossref","first-page":"398","DOI":"10.1016\/j.future.2006.09.001","volume":"23","author":"A-A Tantar","year":"2007","unstructured":"Tantar A-A, Melab N, Talbi E-G, Parent B, Horvath D (2007) A parallel hybrid genetic algorithm for protein structure prediction on the computational grid. Future Gener Comput Syst 23:398\u2013409","journal-title":"Future Gener Comput Syst"},{"key":"368_CR16","first-page":"32","volume":"2","author":"R Day","year":"2002","unstructured":"Day R, Zydallis J, Lamont G (2002) Solving the protein structure prediction problem through a multiobjective genetic algorithm. Nanotech 2:32\u201335","journal-title":"Nanotech"},{"key":"368_CR17","doi-asserted-by":"crossref","first-page":"66","DOI":"10.1016\/S0076-6879(04)83004-0","volume":"383","author":"C Rohl","year":"2004","unstructured":"Rohl C, Strauss C, Misura K, Baker D (2004) Protein structure prediction using Rosetta. Methods Enzymol 383:66\u201393","journal-title":"Methods Enzymol"},{"key":"368_CR18","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1186\/1741-7007-5-17","volume":"5","author":"S Wu","year":"2007","unstructured":"Wu S, Skolnick J, Zhang Y (2007) Ab initio modelling of small proteins by iterative TASSER simulations. BMC Biol 5:17","journal-title":"BMC Biol"},{"key":"368_CR19","doi-asserted-by":"crossref","first-page":"387","DOI":"10.1098\/rsif.2007.1278","volume":"5","author":"G Helles","year":"2007","unstructured":"Helles G (2007) A comparative study of the reported performance of ab initio protein structure prediction algorithms. J R Soc Interface 5:387\u2013396","journal-title":"J R Soc Interface"},{"key":"368_CR20","doi-asserted-by":"crossref","first-page":"431","DOI":"10.1016\/S0959-440X(02)00344-5","volume":"12","author":"R Dunbrack","year":"2002","unstructured":"Dunbrack R (2002) Rotamer libraries in the 21st century. Curr Opin Struct Biol 12:431\u2013440","journal-title":"Curr Opin Struct Biol"}],"container-title":["The Journal of Supercomputing"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s11227-009-0368-4.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1007\/s11227-009-0368-4\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s11227-009-0368-4","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,6,1]],"date-time":"2019-06-01T10:24:00Z","timestamp":1559384640000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/s11227-009-0368-4"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2009,12,18]]},"references-count":20,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2011,11]]}},"alternative-id":["368"],"URL":"https:\/\/doi.org\/10.1007\/s11227-009-0368-4","relation":{},"ISSN":["0920-8542","1573-0484"],"issn-type":[{"value":"0920-8542","type":"print"},{"value":"1573-0484","type":"electronic"}],"subject":[],"published":{"date-parts":[[2009,12,18]]}}}