{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,3]],"date-time":"2026-08-03T00:30:15Z","timestamp":1785717015216,"version":"3.56.0"},"reference-count":13,"publisher":"Springer Science and Business Media LLC","issue":"3","license":[{"start":{"date-parts":[[2013,1,5]],"date-time":"2013-01-05T00:00:00Z","timestamp":1357344000000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["J Supercomput"],"published-print":{"date-parts":[[2013,9]]},"DOI":"10.1007\/s11227-012-0856-9","type":"journal-article","created":{"date-parts":[[2013,1,4]],"date-time":"2013-01-04T12:26:47Z","timestamp":1357302407000},"page":"1076-1088","source":"Crossref","is-referenced-by-count":6,"title":["Improving multiple sequence alignment biological accuracy through genetic algorithms"],"prefix":"10.1007","volume":"65","author":[{"given":"Miquel","family":"Orobitg","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fernando","family":"Cores","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fernando","family":"Guirado","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Concepci\u00f3","family":"Roig","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cedric","family":"Notredame","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2013,1,5]]},"reference":[{"key":"856_CR1","doi-asserted-by":"crossref","first-page":"337","DOI":"10.1089\/cmb.1994.1.337","volume":"4","author":"L Wang","year":"1994","unstructured":"Wang L, Jiang T (1994) On the complexity of multiple sequence alignment. J Comput Biol 4:337\u2013348","journal-title":"J Comput Biol"},{"issue":"8","key":"856_CR2","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pcbi.0030123","volume":"3","author":"C Notredame","year":"2007","unstructured":"Notredame C (2007) Recent evolutions of multiple sequence alignment algorithms. PLoS Comput Biol 3(8):e123","journal-title":"PLoS Comput Biol"},{"key":"856_CR3","doi-asserted-by":"crossref","first-page":"351","DOI":"10.1007\/BF02603120","volume":"4","author":"DF Feng","year":"1987","unstructured":"Feng DF, Doolittle RF (1987) Progressive sequence alignment as a prerequisite to correct phylogenetic trees. J Mol Evol 4:351\u2013360","journal-title":"J Mol Evol"},{"key":"856_CR4","doi-asserted-by":"crossref","first-page":"205","DOI":"10.1006\/jmbi.2000.4042","volume":"302","author":"C Notredame","year":"2000","unstructured":"Notredame C, Higgins DG, Heringa J (2000) T-Coffee: a novel method for fast and accurate multiple sequence alignment. J Mol Biol 302:205\u2013217","journal-title":"J Mol Biol"},{"key":"856_CR5","doi-asserted-by":"crossref","first-page":"4673","DOI":"10.1093\/nar\/22.22.4673","volume":"22","author":"JD Thompson","year":"1994","unstructured":"Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673\u20134680","journal-title":"Nucleic Acids Res"},{"issue":"8","key":"856_CR6","doi-asserted-by":"crossref","first-page":"1515","DOI":"10.1093\/nar\/24.8.1515","volume":"24","author":"C Notredame","year":"1996","unstructured":"Notredame C, Higgins DG (1996) SAGA: sequence alignment by genetic algorithm. Nucleic Acids Res 24(8):1515\u20131524","journal-title":"Nucleic Acids Res"},{"key":"856_CR7","volume-title":"Genetic algorithms in search, optimisation, and machine learning","author":"DE Goldberg","year":"1989","unstructured":"Goldberg DE (1989) Genetic algorithms in search, optimisation, and machine learning. Addison-Wesley, Reading"},{"key":"856_CR8","doi-asserted-by":"crossref","first-page":"1792","DOI":"10.1093\/nar\/gkh340","volume":"32","author":"RC Edgar","year":"2004","unstructured":"Edgar RC (2004) Muscle: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32:1792\u20131797","journal-title":"Nucleic Acids Res"},{"key":"856_CR9","unstructured":"Massachusetts Institute of Technology and Matthew Wall, GAlib. http:\/\/lancet.mit.edu\/galib-2.4\/"},{"issue":"86","key":"856_CR10","doi-asserted-by":"crossref","first-page":"4412","DOI":"10.1073\/pnas.86.12.4412","volume":"12","author":"DJ Lipman","year":"1989","unstructured":"Lipman DJ, Altschul SF, Kececioglu JD (1989) A tool for multiple sequence alignment. Proc Natl Acad Sci USA 12(86):4412\u20134415","journal-title":"Proc Natl Acad Sci USA"},{"issue":"314","key":"856_CR11","doi-asserted-by":"crossref","first-page":"937","DOI":"10.1006\/jmbi.2001.5187","volume":"4","author":"JD Thompson","year":"2001","unstructured":"Thompson JD, Plewniak F, Ripp R, Thierry JC, Poch O (2001) Towards a reliable objective function for multiple sequence alignments. J Mol Biol 4(314):937\u2013951","journal-title":"J Mol Biol"},{"issue":"27","key":"856_CR12","doi-asserted-by":"crossref","first-page":"3385","DOI":"10.1093\/bioinformatics\/btr587","volume":"24","author":"C Kemena","year":"2011","unstructured":"Kemena C, Taly JF, Kleinjung J, Notredame C (2011) STRIKE: evaluation of protein MSAs using a single 3D structure. Bioinformatics 24(27):3385\u20133391","journal-title":"Bioinformatics"},{"issue":"14","key":"856_CR13","doi-asserted-by":"crossref","first-page":"407","DOI":"10.1093\/bioinformatics\/14.5.407","volume":"5","author":"C Notredame","year":"1998","unstructured":"Notredame C, Holm L, Higgins DG (1998) COFFEE: an objective function for multiple sequence alignments. Bioinformatics 5(14):407\u2013422","journal-title":"Bioinformatics"}],"container-title":["The Journal of Supercomputing"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s11227-012-0856-9.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1007\/s11227-012-0856-9\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s11227-012-0856-9","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,6,1]],"date-time":"2019-06-01T10:24:08Z","timestamp":1559384648000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/s11227-012-0856-9"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013,1,5]]},"references-count":13,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2013,9]]}},"alternative-id":["856"],"URL":"https:\/\/doi.org\/10.1007\/s11227-012-0856-9","relation":{},"ISSN":["0920-8542","1573-0484"],"issn-type":[{"value":"0920-8542","type":"print"},{"value":"1573-0484","type":"electronic"}],"subject":[],"published":{"date-parts":[[2013,1,5]]}}}