{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2022,4,1]],"date-time":"2022-04-01T05:55:24Z","timestamp":1648792524843},"reference-count":21,"publisher":"Springer Science and Business Media LLC","issue":"6","license":[{"start":{"date-parts":[[2007,12,1]],"date-time":"2007-12-01T00:00:00Z","timestamp":1196467200000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Sci. China Ser. F-Inf. Sci."],"published-print":{"date-parts":[[2007,12]]},"DOI":"10.1007\/s11432-007-0065-y","type":"journal-article","created":{"date-parts":[[2007,11,17]],"date-time":"2007-11-17T04:41:41Z","timestamp":1195274501000},"page":"846-866","source":"Crossref","is-referenced-by-count":1,"title":["A fuzzy model of predicting RNA secondary structure"],"prefix":"10.1007","volume":"50","author":[{"given":"DanDan","family":"Song","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"ZhiDong","family":"Deng","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","reference":[{"key":"65_CR1","doi-asserted-by":"crossref","first-page":"68","DOI":"10.1137\/0135006","volume":"35","author":"R. Nussinov","year":"1978","unstructured":"Nussinov R, Pieczenik G, Griggs J R, et al. Algorithms for loop matchings. SIAM J Appl Math, 1978, 35: 68\u201382","journal-title":"SIAM J Appl Math"},{"issue":"1","key":"65_CR2","doi-asserted-by":"crossref","first-page":"133","DOI":"10.1093\/nar\/9.1.133","volume":"9","author":"M. Zuker","year":"1981","unstructured":"Zuker M, Stiegler P. Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information. Nucleic Acids Res, 1981, 9(1): 133\u2013148","journal-title":"Nucleic Acids Res"},{"issue":"13","key":"65_CR3","doi-asserted-by":"crossref","first-page":"3406","DOI":"10.1093\/nar\/gkg595","volume":"31","author":"M. Zuker","year":"2003","unstructured":"Zuker M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res, 2003, 31(13): 3406\u20133415","journal-title":"Nucleic Acids Res"},{"key":"65_CR4","doi-asserted-by":"crossref","first-page":"167","DOI":"10.1007\/BF00818163","volume":"125","author":"I. L. Hofacker","year":"1994","unstructured":"Hofacker I L, Fontana W, Stadler P F, et al. Fast folding and comparison of RNA secondary structures. Mon Chem, 1994, 125: 167\u2013188","journal-title":"Mon Chem"},{"issue":"11","key":"65_CR5","doi-asserted-by":"crossref","first-page":"2079","DOI":"10.1093\/nar\/22.11.2079","volume":"22","author":"S. R. Eddy","year":"1994","unstructured":"Eddy S R, Durbin R. RNA sequence analysis using covariance models. Nucleic Acids Res, 1994, 22(11): 2079\u20132088","journal-title":"Nucleic Acids Res"},{"issue":"6","key":"65_CR6","doi-asserted-by":"crossref","first-page":"446","DOI":"10.1093\/bioinformatics\/15.6.446","volume":"15","author":"B. Kundsen","year":"1999","unstructured":"Kundsen B, Hein J. RNA secondary structure prediction using stochastic context-free grammars and evolutionary history. Bioinformatics, 1999, 15(6): 446\u2013454","journal-title":"Bioinformatics"},{"key":"65_CR7","doi-asserted-by":"crossref","first-page":"71","DOI":"10.1186\/1471-2105-5-71","volume":"5","author":"R. D. Dowell","year":"2004","unstructured":"Dowell R D, Eddy S R. Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction. BMC Bioinf, 2004, 5: 71\u201399","journal-title":"BMC Bioinf"},{"key":"65_CR8","doi-asserted-by":"crossref","first-page":"323","DOI":"10.1261\/rna.2274106","volume":"12","author":"Y. Ding","year":"2006","unstructured":"Ding Y. Statistical and Bayesian approaches to RNA secondary structure prediction. RNA, 2006, 12: 323\u2013331","journal-title":"RNA"},{"issue":"6\u20137","key":"65_CR9","doi-asserted-by":"crossref","first-page":"1105","DOI":"10.1002\/bip.360290621","volume":"29","author":"J. S. McCaskill","year":"1990","unstructured":"McCaskill J S. The equilibrium partition function and base pair binding probabilities for RNA secondary structure. Biopolymers, 1990, 29(6\u20137): 1105\u20131119","journal-title":"Biopolymers"},{"key":"65_CR10","doi-asserted-by":"crossref","first-page":"3446","DOI":"10.1093\/nar\/gkg521","volume":"31","author":"Y. J. Hu","year":"2003","unstructured":"Hu Y J. GPRM: A genetic programming approach to finding common RNA secondary structure elements. Nucleic Acids Res, 2003, 31: 3446\u20133449","journal-title":"Nucleic Acids Res"},{"key":"65_CR11","unstructured":"Steeg E W. Neural network algorithms for RNA secondary structure prediction. Technical Report CRG-TR-90-4, University of Toronto Computer Science Dept. 1990"},{"key":"65_CR12","doi-asserted-by":"crossref","first-page":"338","DOI":"10.1016\/S0019-9958(65)90241-X","volume":"8","author":"L. A. Zadeh","year":"1965","unstructured":"Zadeh L A. Fuzzy sets. Inform Contr, 1965, 8: 338\u2013353","journal-title":"Inform Contr"},{"issue":"21","key":"65_CR13","doi-asserted-by":"crossref","first-page":"11936","DOI":"10.1073\/pnas.1635048100","volume":"100","author":"R. Blankenbecler","year":"2003","unstructured":"Blankenbecler R, Ohlsson M, Peterson C, et al. Matching protein structures with fuzzy alignments. Proc Natl Acad Sci USA, 2003, 100(21): 11936\u201311940","journal-title":"Proc Natl Acad Sci USA"},{"key":"65_CR14","doi-asserted-by":"crossref","first-page":"1403","DOI":"10.1093\/bioinformatics\/bti156","volume":"21","author":"E. Jacob","year":"2005","unstructured":"Jacob E, Sasikumar R, Nair K N R. A fuzzy guided genetic algorithm for operon prediction. Bioinformatics, 2005, 21: 1403\u20131407","journal-title":"Bioinformatics"},{"key":"65_CR15","doi-asserted-by":"crossref","first-page":"31","DOI":"10.1016\/0165-0114(95)00239-1","volume":"81","author":"J. Kacprzyk","year":"1996","unstructured":"Kacprzyk J, Esogbue A O. Fuzzy dynamic programming: main developments and applications. Fuzzy Set Syst, 1996, 81: 31\u201345","journal-title":"Fuzzy Set Syst"},{"issue":"5","key":"65_CR16","doi-asserted-by":"crossref","first-page":"2053","DOI":"10.1006\/jmbi.1998.2436","volume":"285","author":"E. Rivas","year":"1999","unstructured":"Rivas E, Eddy S R. A dynamic programming algorithm for RNA structure prediction including pseudoknots. J Mol Biol, 1999, 285(5): 2053\u20132068","journal-title":"J Mol Biol"},{"key":"65_CR17","unstructured":"Bilgic T, Turksen I B. Measurement of membership functions: Theoretical and empirical work. Handbook of Fuzzy Sets and Systems, 1997"},{"key":"65_CR18","doi-asserted-by":"crossref","first-page":"299","DOI":"10.1017\/CBO9780511790492","volume-title":"Biological sequence analysis: Probabilistic models of proteins and nucleic acids","author":"R. Durbin","year":"1998","unstructured":"Durbin R, Eddy S R, Krogh A, et al. Biological sequence analysis: Probabilistic models of proteins and nucleic acids. London: Cambridge University Press, 1998. 299\u2013325"},{"issue":"13","key":"65_CR19","first-page":"3011","volume":"21","author":"S. Steinberg","year":"1993","unstructured":"Steinberg S, Misch A, Sprinzl M. Compilation of tRNA sequences and sequences of tRNA genes. Proc Natl Acad Sci USA, 1993, 21(13): 3011\u20133015","journal-title":"Proc Natl Acad Sci USA"},{"issue":"23","key":"65_CR20","doi-asserted-by":"crossref","first-page":"5112","DOI":"10.1093\/nar\/22.23.5112","volume":"22","author":"Y. Sakakibara","year":"1994","unstructured":"Sakakibara Y, Brown M, Hughey R, et al. Stochastic context-free grammars for tRNA modeling. Nucleic Acids Res, 1994, 22(23): 5112\u20135120","journal-title":"Nucleic Acids Res"},{"issue":"1","key":"65_CR21","doi-asserted-by":"crossref","first-page":"446","DOI":"10.1093\/nar\/gkg019","volume":"31","author":"C. Zwieb","year":"2003","unstructured":"Zwieb C, Gorodkin J, Knudsen B, et al. tmRDB (tmRNA Database). Nucleic Acids Research, 2003, 31(1): 446\u2013447","journal-title":"Nucleic Acids Research"}],"container-title":["Science in China Series F: Information Sciences"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s11432-007-0065-y.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1007\/s11432-007-0065-y\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s11432-007-0065-y","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,6,1]],"date-time":"2019-06-01T11:35:53Z","timestamp":1559388953000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/s11432-007-0065-y"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2007,12]]},"references-count":21,"journal-issue":{"issue":"6","published-print":{"date-parts":[[2007,12]]}},"alternative-id":["65"],"URL":"https:\/\/doi.org\/10.1007\/s11432-007-0065-y","relation":{},"ISSN":["1009-2757","1862-2836"],"issn-type":[{"value":"1009-2757","type":"print"},{"value":"1862-2836","type":"electronic"}],"subject":[],"published":{"date-parts":[[2007,12]]}}}