{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,26]],"date-time":"2026-02-26T15:32:34Z","timestamp":1772119954686,"version":"3.50.1"},"reference-count":62,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2021,1,15]],"date-time":"2021-01-15T00:00:00Z","timestamp":1610668800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2021,1,15]],"date-time":"2021-01-15T00:00:00Z","timestamp":1610668800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Neuroinform"],"published-print":{"date-parts":[[2022,1]]},"DOI":"10.1007\/s12021-020-09508-1","type":"journal-article","created":{"date-parts":[[2021,1,15]],"date-time":"2021-01-15T15:05:43Z","timestamp":1610723143000},"page":"7-23","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":5,"title":["Data-Theoretical Synthesis of the Early Developmental Process"],"prefix":"10.1007","volume":"20","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-3869-3175","authenticated-orcid":false,"given":"Bradly","family":"Alicea","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Richard","family":"Gordon","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Thomas E.","family":"Portegys","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2021,1,15]]},"reference":[{"key":"9508_CR1","doi-asserted-by":"publisher","first-page":"247","DOI":"10.1016\/j.biosystems.2018.09.016","volume":"173","author":"B Alicea","year":"2018","unstructured":"Alicea, B. (2018). The emergent connectome in Caenorhabditis elegans embryogenesis. BioSystems, 173, 247\u2013255.","journal-title":"BioSystems"},{"key":"9508_CR2","doi-asserted-by":"publisher","unstructured":"Alicea, B. (2020). Raising the connectome: the emergence of neuronal activity and behavior in C. elegans. Frontiers in Cellular Neuroscience. https:\/\/doi.org\/10.3389\/fncel.2020.524791.","DOI":"10.3389\/fncel.2020.524791"},{"key":"9508_CR3","doi-asserted-by":"publisher","first-page":"465","DOI":"10.1016\/B978-0-12-386541-0.00037-0","volume-title":"Principles of cloning","author":"B Alicea","year":"2014","unstructured":"Alicea, B., & Cibelli, J. B. (2014). Comparing SCNT-derived ESCs and iPSCs. In J. Cibelli, I. Wilmut, R. Jaenisch, J. Gurdon, R. Lanza, M. West, & K. Campbell (Eds.), Principles of cloning (pp. 465\u2013471). Cambridge: Academic Press."},{"issue":"3","key":"9508_CR4","doi-asserted-by":"publisher","first-page":"33","DOI":"10.3390\/biology5030033","volume":"5","author":"B Alicea","year":"2016","unstructured":"Alicea, B., & Gordon, R. (2016). Quantifying mosaic development: towards an evo-devo postmodern synthesis of the evolution of development via differentiation trees of embryos. Biology, 5(3), 33.","journal-title":"Biology"},{"key":"9508_CR5","doi-asserted-by":"publisher","first-page":"235","DOI":"10.1016\/j.biosystems.2018.09.009","volume":"173","author":"B Alicea","year":"2018","unstructured":"Alicea, B., & Gordon, R. (2018). Cell differentiation processes as spatial networks: identifying four-dimensional structure in embryogenesis. BioSystems, 173, 235\u2013246.","journal-title":"BioSystems"},{"issue":"19","key":"9508_CR6","doi-asserted-by":"publisher","first-page":"2641","DOI":"10.1089\/scd.2013.0040","volume":"22","author":"B Alicea","year":"2013","unstructured":"Alicea, B., Murthy, S., Keaton, S. A., Cobbett, P., Cibelli, J. B., & Suhr, S. T. (2013). Defining the diversity of phenotypic respecification using multiple cell lines and reprogramming regimens. Stem Cells and Development, 22(19), 2641\u20132654.","journal-title":"Stem Cells and Development"},{"key":"9508_CR7","doi-asserted-by":"publisher","unstructured":"Alicea, B., McGrew, S., Gordon, R., Larson, S., Warrington, T., & Watts, M. (2014). DevoWorm: differentiation waves and computation in C. elegans embryogenesis. bioRxiv. https:\/\/doi.org\/10.1101\/009993.","DOI":"10.1101\/009993"},{"key":"9508_CR8","doi-asserted-by":"publisher","first-page":"1016","DOI":"10.1038\/s41567-018-0202-0","volume":"14","author":"JI Alsous","year":"2018","unstructured":"Alsous, J. I., Villoutreix, P., Stoop, N., Shvartsman, S. Y., & Dunkel, J. (2018). Entropic effects in cell lineage tree packings. Nature Physics, 14, 1016\u20131021.","journal-title":"Nature Physics"},{"issue":"1","key":"9508_CR9","doi-asserted-by":"publisher","DOI":"10.4161\/21624054.2014.992665","volume":"4","author":"R Amini","year":"2015","unstructured":"Amini, R., Chartier, N. T., & Labbe, J.-C. (2015). Syncytium biogenesis: it\u2019s all about maintaining good connections. Worm, 4(1), e992665.","journal-title":"Worm"},{"key":"9508_CR10","doi-asserted-by":"publisher","first-page":"152","DOI":"10.1038\/nature03178","volume":"433","author":"RBR Azevedo","year":"2005","unstructured":"Azevedo, R. B. R., Lohaus, R., Braun, V., Gumbel, M., Umamaheshwar, M., Agapow, P. M., Houthoofd, W., Platzer, U., Borgonie, G., Meinzer, H. P., & Leroi, A. M. (2005). The simplicity of metazoan cell lineages. Nature, 433, 152\u2013156.","journal-title":"Nature"},{"issue":"8","key":"9508_CR11","doi-asserted-by":"publisher","first-page":"2707","DOI":"10.1073\/pnas.0511111103","volume":"103","author":"Z Bao","year":"2006","unstructured":"Bao, Z., Murray, J. I., Boyle, T., Ooi, S.-L., Sandel, M. J., & Waterston, R. H. (2006). Automated cell lineage tracing in Caenorhabditis elegans. PNAS, 103(8), 2707\u20132712.","journal-title":"PNAS"},{"issue":"1","key":"9508_CR12","doi-asserted-by":"publisher","first-page":"65","DOI":"10.1016\/j.ydbio.2008.02.054","volume":"318","author":"Z Bao","year":"2008","unstructured":"Bao, Z., Zhao, Z., Boyle, T. J., Murray, J. I., & Waterston, R. H. (2008). Control of cell cycle timing during C. elegans embryogenesis. Developmental Biology, 318(1), 65\u201372.","journal-title":"Developmental Biology"},{"issue":"5","key":"9508_CR13","doi-asserted-by":"publisher","first-page":"889","DOI":"10.1242\/dev.00302","volume":"130","author":"LR Baugh","year":"2003","unstructured":"Baugh, L. R., Hill, A. A., Slonim, D. K., Brown, E. L., & Hunter, C. P. (2003). Composition and dynamics of the Caenorhabditis elegans early embryonic transcriptome. Development, 130(5), 889\u2013900.","journal-title":"Development"},{"issue":"5","key":"9508_CR14","first-page":"770","volume":"40","author":"JA Bolker","year":"2000","unstructured":"Bolker, J. A. (2000). Modularity in development and why it matters to evo-devo. American Zoologist, 40(5), 770\u2013776.","journal-title":"American Zoologist"},{"key":"9508_CR15","doi-asserted-by":"publisher","unstructured":"Borsboom, D., van der Maas, H. L. J., Dalege, J., Kievit, R. A., & Haig, B. D. (2020). Theory construction methodology: a practical framework for building theories in Psychology. PsyArXiv. https:\/\/doi.org\/10.31234\/osf.io\/w5tp8.","DOI":"10.31234\/osf.io\/w5tp8"},{"issue":"16","key":"9508_CR16","doi-asserted-by":"publisher","first-page":"3097","DOI":"10.1242\/dev.02475","volume":"133","author":"G Broitman-Maduro","year":"2006","unstructured":"Broitman-Maduro, G., Lin, K. T.-H., Hung, W. W. K., & Maduro, M. F. (2006). Specification of the C. elegans MS blastomere by the T-box factor TBX-35. Development, 133(16), 3097\u20133106.","journal-title":"Development"},{"issue":"7","key":"9508_CR17","doi-asserted-by":"publisher","first-page":"574","DOI":"10.1136\/jech.2005.045153","volume":"60","author":"RM Carpiano","year":"2006","unstructured":"Carpiano, R. M., & Daley, D. M. (2006). Theory building on the high seas of population health: love boat, mutiny on the bounty, or poseidon adventure? Journal of Epidemiology and Community Health, 60(7), 574\u2013577.","journal-title":"Journal of Epidemiology and Community Health"},{"key":"9508_CR18","doi-asserted-by":"publisher","DOI":"10.1093\/0195171276.001.0001","volume-title":"Inventing temperature: Measurement and Scientific progress","author":"H Chang","year":"2004","unstructured":"Chang, H. (2004). Inventing temperature: Measurement and Scientific progress. Oxford: Oxford University Press."},{"key":"9508_CR19","unstructured":"Chisholm, A.D. & Hardin, J. (2005). Epidermal Morphogenesis, WormBook: the online review of C. elegans biology. Accessed 11 Mar 2018. http:\/\/wormbook.org\/chapters\/www_epidermalmorphogenesis\/epidermalmorphogenesis.pdf"},{"issue":"1","key":"9508_CR20","doi-asserted-by":"publisher","first-page":"12","DOI":"10.5465\/amr.2009.0486","volume":"36","author":"KG Corley","year":"2011","unstructured":"Corley, K. G., & Gioia, D. A. (2011). Building theory about theory building: what constitutes a theoretical contribution? Academy of Management Review, 36(1), 12\u201332.","journal-title":"Academy of Management Review"},{"key":"9508_CR21","doi-asserted-by":"publisher","first-page":"302","DOI":"10.3390\/e21030302","volume":"21","author":"J-C Delvenne","year":"2019","unstructured":"Delvenne, J.-C. (2019). Category theory for autonomous and networked dynamical systems. Entropy, 21, 302.","journal-title":"Entropy"},{"key":"9508_CR22","doi-asserted-by":"crossref","DOI":"10.56021\/9780801847806","volume-title":"Biology of Amphibians","author":"WE Duellman","year":"1994","unstructured":"Duellman, W. E., & Trueb, L. (1994). Biology of Amphibians. Baltimore: Johns Hopkins University Press."},{"issue":"1","key":"9508_CR23","first-page":"25","volume":"50","author":"KM Eisenhardt","year":"2007","unstructured":"Eisenhardt, K. M., & Graebner, M. E. (2007). Theory building from cases: opportunities and challenges. The Academy of Management Journal, 50(1), 25\u201332.","journal-title":"The Academy of Management Journal"},{"key":"9508_CR24","doi-asserted-by":"publisher","first-page":"397","DOI":"10.1016\/j.semcdb.2005.02.002","volume":"16","author":"DS Fay","year":"2005","unstructured":"Fay, D. S. (2005). The cell cycle and development: lessons from C. elegans. Seminars in Cell and Developmental Biology, 16, 397\u2013406.","journal-title":"Seminars in Cell and Developmental Biology"},{"key":"9508_CR25","doi-asserted-by":"publisher","first-page":"9369","DOI":"10.1038\/s41598-017-09690-4","volume":"7","author":"R Fickentscher","year":"2017","unstructured":"Fickentscher, R., & Weiss, M. (2017). Physical determinants of asymmetric cell divisions in the early development of Caenorhabditis elegans. Scientific Reports, 7, 9369.","journal-title":"Scientific Reports"},{"key":"9508_CR26","doi-asserted-by":"crossref","unstructured":"Glanville, R. (1982). Inside every white box there are two black boxes trying to get out. Behavioral Science, 27.","DOI":"10.1002\/bs.3830270102"},{"key":"9508_CR27","doi-asserted-by":"publisher","DOI":"10.1142\/2755","volume-title":"The Hierarchical Genome and Differentiation Waves: Novel Unification of Development, Genetics and Evolution","author":"R Gordon","year":"1999","unstructured":"Gordon, R. (1999). The Hierarchical Genome and Differentiation Waves: Novel Unification of Development, Genetics and Evolution. Singapore: World Scientific."},{"key":"9508_CR28","doi-asserted-by":"publisher","first-page":"814.29","DOI":"10.15252\/msb.20145857","volume":"11","author":"VWS Ho","year":"2015","unstructured":"Ho, V. W. S., Wong, M.-K., An, X., Guan, D., Shao, J., Ng, H. C. K., Ren, X., He, K., Liao, J., Ang, Y., Chen, L., Huang, X., Yan, B., Xia, Y., Chan, L. L. H., Chow, K. L., Yan, H., & Zhao, Z. (2015). Systems-level quantification of division timing reveals a common genetic architecture controlling asynchrony and fate asymmetry. Molecular Systems Biology, 11, 814.29.","journal-title":"Molecular Systems Biology"},{"issue":"22","key":"9508_CR29","doi-asserted-by":"publisher","first-page":"R1197","DOI":"10.1016\/j.cub.2016.10.027","volume":"26","author":"O Hobert","year":"2016","unstructured":"Hobert, O., Glenwinkel, L., & White, J. (2016). Revisiting neuronal cell type classification in Caenorhabditis elegans. Current Biology, 26(22), R1197\u2013R1203.","journal-title":"Current Biology"},{"key":"9508_CR30","doi-asserted-by":"crossref","unstructured":"Kitchin, R. (2014). Big Data, new epistemologies and paradigm shifts. Big Data and Society, April\u2013June, 1\u201312.","DOI":"10.1177\/2053951714528481"},{"key":"9508_CR31","doi-asserted-by":"publisher","first-page":"269","DOI":"10.1016\/j.jtbi.2011.01.051","volume":"276","author":"DC Krakauer","year":"2011","unstructured":"Krakauer, D. C., Collins, J. P., Erwin, D., Flack, J. C., Fontana, W., Laubichler, M. D., Prohaska, S. J., West, G. B., & Stadler, P. F. (2011). The challenges and scope of theoretical biology. Journal of Theoretical Biology, 276, 269\u2013276.","journal-title":"Journal of Theoretical Biology"},{"key":"9508_CR32","volume-title":"The structure of scientific revolutions","author":"T Kuhn","year":"1962","unstructured":"Kuhn, T. (1962). The structure of scientific revolutions. Chicago: University of Chicago Press."},{"issue":"10","key":"9508_CR33","doi-asserted-by":"publisher","first-page":"3948","DOI":"10.1073\/pnas.1900357116","volume":"116","author":"L Laplane","year":"2019","unstructured":"Laplane, L., Mantovani, P., Adolphs, R., Chang, H., Mantovani, A., McFall-Ngai, M., Rovelli, C., Sober, E., & Pradeu, T. (2019). Opinion: why science needs philosophy. PNAS, 116(10), 3948\u20133952.","journal-title":"PNAS"},{"issue":"5","key":"9508_CR34","doi-asserted-by":"publisher","first-page":"1115","DOI":"10.1016\/j.neuron.2014.05.010","volume":"82","author":"L Luo","year":"2014","unstructured":"Luo, L., Wen, Q., Ren, J., Hendricks, M., Gershow, M., Qin, Y., Greenwood, J., Soucy, E. R., Klein, M., Smith-Parker, H. K., Calvo, A. C., Colon-Ramos, D. A., Samuel, A. D. T., & Zhang, Y. (2014). Dynamic encoding of perception, memory, and movement in a C. elegans chemotaxis circuit. Neuron, 82(5), 1115\u20131128.","journal-title":"Neuron"},{"issue":"5","key":"9508_CR35","doi-asserted-by":"publisher","first-page":"3","DOI":"10.1108\/01443579310028120","volume":"13","author":"J Meredith","year":"1993","unstructured":"Meredith, J. (1993). Theory building through conceptual methods. International Journal of Operations and Production Management, 13(5), 3\u201311.","journal-title":"International Journal of Operations and Production Management"},{"issue":"11","key":"9508_CR36","doi-asserted-by":"publisher","first-page":"R425","DOI":"10.1016\/j.cub.2007.03.043","volume":"17","author":"EG Moss","year":"2007","unstructured":"Moss, E. G. (2007). Heterochronic genes and the nature of developmental time. Current Biology, 17(11), R425\u2013R434.","journal-title":"Current Biology"},{"key":"9508_CR37","doi-asserted-by":"publisher","first-page":"6635","DOI":"10.1038\/ncomms7635","volume":"6","author":"A Nakamoto","year":"2015","unstructured":"Nakamoto, A., Hester, S. D., Constantinou, S. J., Blaine, W. G., Tewksbury, A. B., Matei, M. T., Nagy, L. M., & Williams, T. A. (2015). Changing cell behaviors during beetle embryogenesis correlates with slowing of segmentation. Nature Communications, 6, 6635.","journal-title":"Nature Communications"},{"key":"9508_CR38","doi-asserted-by":"publisher","first-page":"253","DOI":"10.1016\/0165-6074(85)90032-8","volume":"15","author":"P Naur","year":"1985","unstructured":"Naur, P. (1985). Programming as theory building. Microprocessing and Microprogramming, 15, 253\u2013261.","journal-title":"Microprocessing and Microprogramming"},{"issue":"1","key":"9508_CR39","doi-asserted-by":"publisher","first-page":"e23701","DOI":"10.4161\/worm.23701","volume":"2","author":"S Pettersson","year":"2013","unstructured":"Pettersson, S., Forchheimer, R., & Larsson, J.-A. (2013). Meta-Boolean models of asymmetric division patterns in the C. elegans intestinal lineage Implications for the posterior boundary of intestinal twist. Worm, 2(1), e23701.","journal-title":"Worm"},{"key":"9508_CR40","doi-asserted-by":"publisher","first-page":"482","DOI":"10.1006\/dbio.2001.0235","volume":"233","author":"MF Portereiko","year":"2001","unstructured":"Portereiko, M. F., & Mango, S. E. (2001). Early morphogenesis of the Caenorhabditis elegans pharynx. Developmental Biology, 233, 482\u2013494.","journal-title":"Developmental Biology"},{"key":"9508_CR41","doi-asserted-by":"publisher","first-page":"385","DOI":"10.1038\/nature15700","volume":"526","author":"M Sammut","year":"2015","unstructured":"Sammut, M., Cook, S. J., Nguyen, K. C. Q., Felton, T., Hall, D. H., Emmons, S. W., Poole, R. J., & Barrios, A. (2015). Glia-derived neurons are required for sex-specific learning in C. elegans. Nature, 526, 385\u2013390.","journal-title":"Nature"},{"key":"9508_CR42","doi-asserted-by":"publisher","first-page":"234","DOI":"10.1006\/dbio.1997.8509","volume":"184","author":"R Schnabel","year":"1997","unstructured":"Schnabel, R., Hutter, H., Moerman, D., & Schnabel, H. (1997). Assessing normal embryogenesis in Caenorhabditis elegans using a 4D microscope: variability of development and regional specification. Developmental Biology, 184, 234\u2013265.","journal-title":"Developmental Biology"},{"key":"9508_CR43","doi-asserted-by":"publisher","first-page":"618","DOI":"10.1038\/nrg3542","volume":"14","author":"E Shapiro","year":"2013","unstructured":"Shapiro, E., Biezuner, T., & Linnarsson, S. (2013). Single-cell sequencing-based technologies will revolutionize whole-organism science. Nature Reviews Genetics, 14, 618\u2013630.","journal-title":"Nature Reviews Genetics"},{"issue":"4","key":"9508_CR44","doi-asserted-by":"publisher","first-page":"207","DOI":"10.1027\/1864-9335\/a000425","volume":"51","author":"PE Smaldino","year":"2020","unstructured":"Smaldino, P. E. (2020). How to translate a verbal theory into a formal model. Social Psychology, 51(4), 207\u2013218.","journal-title":"Social Psychology"},{"key":"9508_CR45","volume-title":"Category theory for the sciences","author":"DI Spivak","year":"2014","unstructured":"Spivak, D. I. (2014). Category theory for the sciences. Cambridge: MIT Press."},{"key":"9508_CR46","volume-title":"Methodology of Theory-building","author":"E Steiner","year":"1988","unstructured":"Steiner, E. (1988). Methodology of Theory-building. Sydney: Educology Research Associates."},{"key":"9508_CR47","doi-asserted-by":"publisher","first-page":"67","DOI":"10.3389\/fncel.2014.00067","volume":"8","author":"RF Stout","year":"2014","unstructured":"Stout, R. F., Verkhratsky, A., & Parpura, V. (2014). Caenorhabditis elegans glia modulate neuronal activity and behavior. Frontiers in Cellular Neuroscience, 8, 67.","journal-title":"Frontiers in Cellular Neuroscience"},{"issue":"1","key":"9508_CR48","doi-asserted-by":"publisher","first-page":"64","DOI":"10.1016\/0012-1606(83)90201-4","volume":"100","author":"JE Sulston","year":"1983","unstructured":"Sulston, J. E., Schierenberg, E., White, J. G., & Thomson, J. N. (1983). The embryonic cell lineage of the nematode Caenorhabditis elegans. Developmental Biology, 100(1), 64\u2013119.","journal-title":"Developmental Biology"},{"key":"9508_CR49","doi-asserted-by":"publisher","first-page":"21","DOI":"10.1186\/s40537-018-0132-9","volume":"5","author":"L Thiry","year":"2018","unstructured":"Thiry, L., Zhao, H., & Hassenforder, M. (2018). Categories for (Big) Data models and optimization. Journal of Big Data, 5, 21.","journal-title":"Journal of Big Data"},{"issue":"4","key":"9508_CR50","doi-asserted-by":"publisher","first-page":"430","DOI":"10.1016\/j.devcel.2016.07.025","volume":"38","author":"SC Tintori","year":"2016","unstructured":"Tintori, S. C., Osborne Nishimura, E., Golden, P. T., Lieb, J. D., & Goldstein, B. (2016). A transcriptional lineage of early C. elegans development. Developmental Cell, 38(4), 430\u2013444.","journal-title":"Developmental Cell"},{"key":"9508_CR51","doi-asserted-by":"publisher","first-page":"17","DOI":"10.1186\/1742-4682-8-17","volume":"8","author":"A Tiraihi","year":"2011","unstructured":"Tiraihi, A., Tiraihi, M., & Tiraihi, T. (2011). Self-organization of developing embryos using scale-invariant approach. Theoretical Biology and Medical Modeling, 8, 17.","journal-title":"Theoretical Biology and Medical Modeling"},{"issue":"7","key":"9508_CR52","doi-asserted-by":"publisher","first-page":"573","DOI":"10.1136\/jech.2005.038893","volume":"60","author":"D Vagero","year":"2006","unstructured":"Vagero, D. (2006). Where does new theory come from? Journal of Epidemiology and Community Health, 60(7), 573\u2013574.","journal-title":"Journal of Epidemiology and Community Health"},{"issue":"5","key":"9508_CR53","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0010571","volume":"5","author":"B Vasiev","year":"2010","unstructured":"Vasiev, B., Balter, A., Chaplain, M., Glazier, J. A., & Weijer, C. J. (2010). Modeling gastrulation in the chick embryo: formation of the primitive streak. PLoS One, 5(5), e10571.","journal-title":"PLoS One"},{"key":"9508_CR54","doi-asserted-by":"publisher","first-page":"142","DOI":"10.1186\/1471-213X-7-142","volume":"7","author":"N Velarde","year":"2007","unstructured":"Velarde, N., Gunsalus, K. C., & Piano, F. (2007). Diverse roles of actin in C. elegans early embryogenesis. BMC Developmental Biology, 7, 142.","journal-title":"BMC Developmental Biology"},{"issue":"9","key":"9508_CR55","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1007279","volume":"15","author":"EO Voit","year":"2019","unstructured":"Voit, E. O. (2019). Perspective: dimensions of the scientific method. PLoS Computational Biology, 15(9), e1007279.","journal-title":"PLoS Computational Biology"},{"key":"9508_CR56","doi-asserted-by":"publisher","first-page":"361","DOI":"10.1016\/S0272-6963(98)00019-9","volume":"16","author":"JG Wacker","year":"1998","unstructured":"Wacker, J. G. (1998). A definition of theory: research guidelines for different theory-building research methods in operations management. Journal of Operations Management, 16, 361\u2013385.","journal-title":"Journal of Operations Management"},{"issue":"24","key":"9508_CR57","doi-asserted-by":"publisher","first-page":"12501","DOI":"10.1074\/jbc.M115.705426","volume":"291","author":"M-K Wong","year":"2016","unstructured":"Wong, M.-K., Guan, D., Ng, K. H. C., Ho, S. V. W., An, X., Li, R., Ren, X., & Zhao, X. Z. (2016). Timing of tissue-specific cell division requires a differential onset of zygotic transcription during metazoan embryogenesis. Journal of Biological Chemistry, 291(24), 12501\u201312513.","journal-title":"Journal of Biological Chemistry"},{"key":"9508_CR58","doi-asserted-by":"publisher","unstructured":"Yan, C., Gong, B., Wei, Y., & Gao, Y. (2020a). Deep multi-view enhancement hashing for image retrieval. IEEE Transactions on Pattern Analysis and Machine Intelligence. https:\/\/doi.org\/10.1109\/TPAMI.2020.2975798.","DOI":"10.1109\/TPAMI.2020.2975798"},{"issue":"11","key":"9508_CR59","doi-asserted-by":"publisher","first-page":"3014","DOI":"10.1109\/TMM.2020.2967645","volume":"27","author":"C Yan","year":"2020","unstructured":"Yan, C., Shao, B., Zhao, H., Ning, R., Zhang, Y., & Xu, F. (2020b). 3D room layout estimation from a single RGB image. IEEE Transactions on Multimedia, 27(11), 3014\u20133024.","journal-title":"IEEE Transactions on Multimedia"},{"key":"9508_CR60","unstructured":"Yan, C., Li, Z., Zhang, Y., Liu, Y., Ji, X., & Zhang, Y. (2020c). Depth image denoising using nuclear norm and learning graph models. arXiv, 2008.03741."},{"key":"9508_CR61","doi-asserted-by":"publisher","first-page":"231","DOI":"10.1186\/s13059-020-02133-w","volume":"21","author":"I Yanai","year":"2020","unstructured":"Yanai, I., & Lercher, M. (2020). A hypothesis is a liability. Genome Biology, 21, 231.","journal-title":"Genome Biology"},{"key":"9508_CR62","doi-asserted-by":"publisher","first-page":"43","DOI":"10.1016\/j.inffus.2017.02.007","volume":"38","author":"J Zhao","year":"2017","unstructured":"Zhao, J., Xie, X., Xu, X., & Sun, S. (2017). Multi-view learning overview: recent progress and new challenges. Information Fusion, 38, 43\u201354.","journal-title":"Information Fusion"}],"container-title":["Neuroinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s12021-020-09508-1.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s12021-020-09508-1\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s12021-020-09508-1.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,10,17]],"date-time":"2023-10-17T16:54:42Z","timestamp":1697561682000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s12021-020-09508-1"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2021,1,15]]},"references-count":62,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2022,1]]}},"alternative-id":["9508"],"URL":"https:\/\/doi.org\/10.1007\/s12021-020-09508-1","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/282004","asserted-by":"object"}]},"ISSN":["1539-2791","1559-0089"],"issn-type":[{"value":"1539-2791","type":"print"},{"value":"1559-0089","type":"electronic"}],"subject":[],"published":{"date-parts":[[2021,1,15]]},"assertion":[{"value":"22 December 2020","order":1,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"15 January 2021","order":2,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}}]}}