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Here, we present Stitcher, a novel tool capable of generating such surfaces utilizing MRI data and manual segmentation. Stitcher makes a triangulation between consecutive brain slice segmentations by recursively adding edges that minimize the total length and simultaneously avoid self-intersection. We applied this new method to build the cortical surfaces of two dolphins: Guiana dolphin (<jats:italic>Sotalia guianensis<\/jats:italic>), Franciscana dolphin (<jats:italic>Pontoporia blainvillei<\/jats:italic>); and one pinniped: Steller sea lion (<jats:italic>Eumetopias jubatus<\/jats:italic>). Specifically in the case of <jats:italic>P. blainvillei<\/jats:italic>, two reconstructions at two different resolutions were made. Additionally, we also performed reconstructions for sub and non-cortical structures of Guiana dolphin. All our cortical mesh results show remarkable resemblance with the real anatomy of the brains, except <jats:italic>P. blainvillei<\/jats:italic> with low-resolution data. Sub and non-cortical meshes were also properly reconstructed and the spatial positioning of structures was preserved with respect to <jats:italic>S. guianensis<\/jats:italic> cerebral cortex. In a comparative perspective between methods, Stitcher presents compatible results for volumetric measurements when contrasted with other anatomical standard tools. In this way, Stitcher seems to be a viable pipeline for new neuroanatomical analysis, enhancing visualization and descriptions of non-primates species, and broadening the scope of compared neuroanatomy.<\/jats:p>","DOI":"10.1007\/s12021-024-09678-2","type":"journal-article","created":{"date-parts":[[2024,10,10]],"date-time":"2024-10-10T08:01:57Z","timestamp":1728547317000},"page":"539-554","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Stitcher: A Surface Reconstruction Tool for Highly Gyrified Brains"],"prefix":"10.1007","volume":"22","author":[{"ORCID":"https:\/\/orcid.org\/0009-0009-2534-8760","authenticated-orcid":false,"given":"Heitor","family":"Mynssen","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1937-7786","authenticated-orcid":false,"given":"Kamilla","family":"Avelino-de-Souza","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5803-0099","authenticated-orcid":false,"given":"Khallil","family":"Chaim","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8142-9295","authenticated-orcid":false,"given":"Vanessa Lanes","family":"Ribeiro","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-7785-3293","authenticated-orcid":false,"given":"Nina","family":"Patzke","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6950-4106","authenticated-orcid":false,"given":"Bruno","family":"Mota","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2024,10,10]]},"reference":[{"issue":"3","key":"9678_CR1","doi-asserted-by":"publisher","first-page":"191","DOI":"10.1006\/nimg.1994.1004","volume":"1","author":"S Arndt","year":"1994","unstructured":"Arndt, S., Swayze, V., Cizadlo, T., O\u2019Leary, D., Cohen, G., Yuh, W. 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