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This was different from the global prevalent\n                    <jats:italic>ptxP3<\/jats:italic>\n                    strains, in which MR-\n                    <jats:italic>Bp<\/jats:italic>\n                    was rarely reported. The study aimed to determine the underlying mechanism responsible for fitness and resistance in these two strains. We identify proteomic differences between\n                    <jats:italic>ptxP1\/fhaB3<\/jats:italic>\n                    and\n                    <jats:italic>ptxP3\/fhaB1<\/jats:italic>\n                    strains using tandem mass tag (TMT)-based proteomics. We then performed in-depth bioinformatic analysis to determine differentially expressed genes (DEGs), followed by gene ontology (GO), and protein\u2013protein interaction (PPI) network analysis. Further parallel reaction monitoring (PRM) analysis confirmed the expression of four target proteins. Finally, the crystal violet method was used to determine biofilm-forming ability. The results showed that the main significantly different proteins between the two represent isolates were related to biofilm formation. Furthermore, we have confirmed that\n                    <jats:italic>ptxP1\/fhaB3<\/jats:italic>\n                    showed hyperbiofilm formation in comparison with\n                    <jats:italic>ptxP3\/fhaB1<\/jats:italic>\n                    . It is suggested that the resistance and adaptability of\n                    <jats:italic>ptxP1\/fhaB3<\/jats:italic>\n                    strains may be related to the formation of biofilm through proteomics. In a word, we determined the significantly different proteins between the\n                    <jats:italic>ptxP1\/fhaB3<\/jats:italic>\n                    and\n                    <jats:italic>ptxP3\/fhaB1<\/jats:italic>\n                    strains through whole-cell proteome, which were related to biofilm formation.\n                  <\/jats:p>","DOI":"10.1007\/s00203-023-03566-0","type":"journal-article","created":{"date-parts":[[2023,5,6]],"date-time":"2023-05-06T11:01:38Z","timestamp":1683370898000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":3,"title":["The whole-cell proteome shows the characteristics of macrolides-resistant Bordetella pertussis in China linked to the biofilm formation"],"prefix":"10.1007","volume":"205","author":[{"given":"Zhe","family":"Lv","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sha","family":"Yin","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Kaichong","family":"Jiang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wei","family":"Wang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yang","family":"Luan","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shuang","family":"Wu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jianfei","family":"Shi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zhe","family":"Li","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xiao","family":"Ma","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zengguo","family":"Wang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hong","family":"Yan","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2023,5,6]]},"reference":[{"key":"3566_CR1","doi-asserted-by":"publisher","first-page":"357","DOI":"10.1111\/gtc.12577","volume":"23","author":"N Bhardwaj","year":"2018","unstructured":"Bhardwaj N, Syal K, Chatterji D (2018) The role of \u03c9-subunit of Escherichia coli RNA polymerase in stress response. 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