{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,7]],"date-time":"2026-10-07T03:22:08Z","timestamp":1791343328823,"version":"4.3.1"},"reference-count":34,"publisher":"Springer Science and Business Media LLC","issue":"2","license":[{"start":{"date-parts":[[2008,1,24]],"date-time":"2008-01-24T00:00:00Z","timestamp":1201132800000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["J Mol Evol"],"published-print":{"date-parts":[[2008,2]]},"DOI":"10.1007\/s00239-007-9040-x","type":"journal-article","created":{"date-parts":[[2008,1,23]],"date-time":"2008-01-23T17:25:45Z","timestamp":1201109145000},"page":"98-106","source":"Crossref","is-referenced-by-count":100,"title":["The Evolutionary and Epidemiological Dynamics of the Paramyxoviridae"],"prefix":"10.1007","volume":"66","author":[{"given":"Laura W.","family":"Pomeroy","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ottar N.","family":"Bj\u00f8rnstad","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Edward C.","family":"Holmes","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2008,1,24]]},"reference":[{"key":"9040_CR1","doi-asserted-by":"crossref","DOI":"10.1093\/oso\/9780198545996.001.0001","volume-title":"Infectious diseases of humans: dynamics and control","author":"RM Anderson","year":"1991","unstructured":"Anderson RM, May RM (1991) Infectious diseases of humans: dynamics and control. Oxford University Press, Oxford"},{"key":"9040_CR2","first-page":"1260","volume-title":"Encyclopedia of virology","author":"T Barrett","year":"1994","unstructured":"Barrett T (1994) Rinderpest and distemper viruses. In: Webster RG, Granoff A (eds) Encyclopedia of virology. Academic Press, New York, pp 1260\u20131269"},{"key":"9040_CR3","doi-asserted-by":"crossref","first-page":"48","DOI":"10.2307\/2342553","volume":"120","author":"MS Bartlett","year":"1957","unstructured":"Bartlett MS (1957) Measles periodicity and community size. J R Stat Soc A 120:48\u201370","journal-title":"J R Stat Soc A"},{"key":"9040_CR4","doi-asserted-by":"crossref","first-page":"29","DOI":"10.3201\/eid0401.980105","volume":"4","author":"WJ Bellini","year":"1998","unstructured":"Bellini WJ, Rota PA (1998) Genetic diversity of wild-type measles viruses: implications for global measles elimination programs. Emerg Infect Dis 4:29\u201335","journal-title":"Emerg Infect Dis"},{"key":"9040_CR5","doi-asserted-by":"crossref","first-page":"367","DOI":"10.1099\/0022-1317-78-2-367","volume":"78","author":"G Bolt","year":"1997","unstructured":"Bolt G, Jensen TD, Gottschalck E, Arctander P, Appel MJ, Buckland R, Blixenkrone-Moller M (1997) Genetic diversity of the attachment (H) protein gene of current field isolates of canine distemper virus. J Gen Virol 78:367\u2013372","journal-title":"J Gen Virol"},{"key":"9040_CR6","first-page":"1381","volume-title":"Virology","author":"KM Carbone","year":"2001","unstructured":"Carbone KM, Wolinsky JS (2001) Mumps virus. In: Fields BN, Knipe DM, Howley PM (eds) Virology. Lippincott Williams & Wilkins: Philadelphia, PA, pp 1381\u20131400"},{"key":"9040_CR7","doi-asserted-by":"crossref","first-page":"151","DOI":"10.1146\/annurev.micro.51.1.151","volume":"51","author":"E Domingo","year":"1997","unstructured":"Domingo E, Holland JJ (1997) RNA virus mutations for fitness and survival. Annu Rev Microbiol 51:151\u2013178","journal-title":"Annu Rev Microbiol"},{"key":"9040_CR8","unstructured":"Drummond AJ, Rambaut A (2003) BEAST v1.0. Available at: http:\/\/www.evolve.zoo.ox.ac.uk\/beast\/"},{"key":"9040_CR9","doi-asserted-by":"crossref","first-page":"1307","DOI":"10.1093\/genetics\/161.3.1307","volume":"161","author":"AJ Drummond","year":"2002","unstructured":"Drummond AJ, Nicholls GK, Rodrigo AG, Solomon W (2002) Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data. Genetics 161:1307\u20131320","journal-title":"Genetics"},{"key":"9040_CR10","doi-asserted-by":"crossref","first-page":"1185","DOI":"10.1093\/molbev\/msi103","volume":"22","author":"AJ Drummond","year":"2005","unstructured":"Drummond AJ, Rambaut A, Shapiro B, Pybus OG (2005) Bayesian coalescent inference of past population dynamics from molecular sequences. Mol Biol Evol 22:1185\u20131192","journal-title":"Mol Biol Evol"},{"issue":"5","key":"9040_CR11","doi-asserted-by":"crossref","first-page":"e88","DOI":"10.1371\/journal.pbio.0040088","volume":"4","author":"AJ Drummond","year":"2006","unstructured":"Drummond AJ, Ho SYW, Phillips MJ, Rambaut A (2006) Relaxed phylogenetics and dating with confidence. PLoS Biol 4(5):e88","journal-title":"PLoS Biol"},{"key":"9040_CR12","doi-asserted-by":"crossref","DOI":"10.1007\/978-0-387-21822-9","volume-title":"Mathematical population genetics","author":"WJ Ewens","year":"2004","unstructured":"Ewens WJ (2004) Mathematical population genetics. 2nd ed. Springer-Verlag, New York","edition":"2"},{"key":"9040_CR13","volume-title":"Virus taxomomy: classification and nomenclature of viruses","year":"2005","unstructured":"Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA (eds) (2005) Virus taxomomy: classification and nomenclature of viruses. Elsevier Academic Press, New York"},{"key":"9040_CR14","doi-asserted-by":"crossref","first-page":"395","DOI":"10.1016\/S0169-5347(97)01174-9","volume":"12","author":"B Grenfell","year":"1997","unstructured":"Grenfell B, Harwood J (1997) (Meta)population dynamics of infectious diseases. Trend Ecol Evol 12:395\u2013399","journal-title":"Trend Ecol Evol"},{"key":"9040_CR15","first-page":"1401","volume-title":"Virology","author":"DE Griffin","year":"2001","unstructured":"Griffin DE (2001) Measles virus. In: Fields BN, Knipe DM, Howley PM (eds) Virology. Lippincott Williams & Wilkins, Philadelphia, pp 1401\u20131441"},{"key":"9040_CR16","doi-asserted-by":"crossref","first-page":"1074","DOI":"10.1093\/molbev\/msh109","volume":"21","author":"K Hanada","year":"2004","unstructured":"Hanada K, Suzuki Y, Gojobori T (2004) A large variation in the rates of synonymous substitution for RNA viruses and its relationship to a diversity of viral infection and transmission modes. Mol Biol Evol 21:1074\u20131080","journal-title":"Mol Biol Evol"},{"key":"9040_CR17","doi-asserted-by":"crossref","first-page":"156","DOI":"10.1007\/s00239-001-0064-3","volume":"54","author":"GM Jenkins","year":"2002","unstructured":"Jenkins GM, Rambaut A, Pybus OG, Holmes EC (2002) Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis. J Mol Evol 54:156\u2013165","journal-title":"J Mol Evol"},{"key":"9040_CR18","doi-asserted-by":"crossref","first-page":"2531","DOI":"10.1093\/bioinformatics\/bti320","volume":"21","author":"SL Kosakovsky Pond","year":"2005","unstructured":"Kosakovsky Pond SL, Frost SDW (2005) Datamonkey: rapid detection of selective pressure on individual sites of codon alignments. Bioinformatics 21:2531\u20132533","journal-title":"Bioinformatics"},{"key":"9040_CR19","first-page":"1305","volume-title":"Virology","author":"RA Lamb","year":"2001","unstructured":"Lamb RA, Kolakofsky D (2001) Paramyxoviridae: the viruses and their replication. In: Fields BN, Knipe DM, Howley PM (eds) Virology. Lippincott Williams & Wilkins, Philadelphia, pp 1305\u20131340"},{"key":"9040_CR20","doi-asserted-by":"crossref","first-page":"2936","DOI":"10.1128\/JCM.37.9.2936-2942.1999","volume":"37","author":"M Mochizuki","year":"1999","unstructured":"Mochizuki M, Hashimoto M, Hagiwara S, Yoshida Y, Ishiguro S (1999) Genotypes of canine distemper virus determined by analysis of the hemagglutinin genes of recent isolates from dogs in Japan. J Clin Microbiol 37:2936\u20132942","journal-title":"J Clin Microbiol"},{"key":"9040_CR21","first-page":"838","volume-title":"Encyclopedia of virology","author":"C Orvell","year":"1994","unstructured":"Orvell C (1994) Measles virus. In: Webster RG, Granoff A (eds) Encyclopedia of virology. Academic Press, New York, pp 838\u2013847"},{"key":"9040_CR22","doi-asserted-by":"crossref","first-page":"2489","DOI":"10.1099\/0022-1317-83-10-2489","volume":"83","author":"C Orvell","year":"2002","unstructured":"Orvell C, Tecle T, Johansson B, Saito H, Samuelson A (2002) Antigenic relationships between six genotypes of the small hydrophobic protein gene of mumps virus. J Gen Virol 83:2489\u20132496","journal-title":"J Gen Virol"},{"key":"9040_CR23","first-page":"829","volume":"3","author":"PL Panum","year":"1939","unstructured":"Panum PL (1939) Observations made during the epidemic of measles on Faroe Islands in the year 1846. Med Class 3:829\u2013886","journal-title":"Med Class"},{"key":"9040_CR24","doi-asserted-by":"crossref","first-page":"817","DOI":"10.1093\/bioinformatics\/14.9.817","volume":"14","author":"D Posada","year":"1998","unstructured":"Posada D, Crandall KA (1998) MODELTEST: testing the model of DNA substitution. Bioinformatics 14:817\u2013818","journal-title":"Bioinformatics"},{"key":"9040_CR25","doi-asserted-by":"crossref","first-page":"2323","DOI":"10.1126\/science.1058321","volume":"292","author":"OG Pybus","year":"2001","unstructured":"Pybus OG, Charleston MA, Gupta S, Rambaut A, Holmes EC, Harvey PH (2001) The epidemic behaviour of the hepatitis C virus. Science 292:2323\u20132325","journal-title":"Science"},{"key":"9040_CR26","unstructured":"Rambaut A (1996) Se-Al: Sequence Alignment Editor. Available at: http:\/\/www.evolve.zoo.ox.ac.uk\/"},{"key":"9040_CR27","first-page":"876","volume-title":"Encyclopedia of virology","author":"BK Rima","year":"1994","unstructured":"Rima BK (1994) Mumps virus. In: Webster RG, Granoff A (eds) Encyclopedia of virology. Academic Press, New York, pp 876\u2013883"},{"key":"9040_CR28","doi-asserted-by":"crossref","first-page":"6359","DOI":"10.1128\/JVI.77.11.6359-6366.2003","volume":"77","author":"KE Robbins","year":"2003","unstructured":"Robbins KE, Lemey P, Pybus OG, Jaffe HW, Youngpairoj AS, Brown TM, Salemi M, Vandamme A-M, Kalish ML (2003) US human immunodeficiency virus type 1 epidemic: Date of origin, population history, and characterization of early strains. J Virol 77:6359\u20136366","journal-title":"J Virol"},{"key":"9040_CR29","doi-asserted-by":"crossref","first-page":"135","DOI":"10.1016\/0042-6822(92)90742-8","volume":"188","author":"JS Rota","year":"1992","unstructured":"Rota JS, Hummel KB, Rota PA, Bellini WJ (1992) Genetic variability of the glycoprotein genes of current wild-type measles isolates. Virology 188:135\u2013142","journal-title":"Virology"},{"key":"9040_CR30","doi-asserted-by":"crossref","first-page":"968","DOI":"10.1093\/ije\/31.5.968","volume":"31","author":"A Uzicanin","year":"2002","unstructured":"Uzicanin A, Eggers R, Webb E, Harris B, Durrheim D, Ogunbanjo G, Isaacs V, Hawkridge A, Biellik R, Strebel P (2002) Impact of the 1996\u20131997 supplementary measles vaccination campaigns in South Africa. Int J Epidemiol 31:968\u2013976","journal-title":"Int J Epidemiol"},{"key":"9040_CR31","first-page":"585","volume":"48","author":"WHO","year":"1999","unstructured":"WHO (1999) Progress toward measles elimination\u2014Southern Africa, 1996\u20131998. MMWR 48:585\u2013589","journal-title":"MMWR"},{"key":"9040_CR32","unstructured":"WHO (2007) Measles fact sheet. Available at: http:\/\/www.who.int\/mediacentre\/factsheets\/fs286\/en\/"},{"key":"9040_CR33","doi-asserted-by":"crossref","first-page":"2463","DOI":"10.1099\/0022-1317-82-10-2463","volume":"82","author":"CH Woelk","year":"2001","unstructured":"Woelk CH, Jin L, Holmes EC, Brown DWG (2001) Immune and artificial selection in the hemagglutin (H) glycoprotein of measles virus. J Gen Virol 82:2463\u20132474","journal-title":"J Gen Virol"},{"key":"9040_CR34","doi-asserted-by":"crossref","first-page":"1419","DOI":"10.1099\/0022-1317-83-6-1419","volume":"83","author":"CH Woelk","year":"2002","unstructured":"Woelk CH, Pybus OG, Jin L, Brown DWG, Holmes EC (2002) Increased positive selection pressure in persistent (SSPE) versus acute measles virus infections. J Gen Virol 83:1419\u20131430","journal-title":"J Gen Virol"}],"container-title":["Journal of Molecular Evolution"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s00239-007-9040-x.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1007\/s00239-007-9040-x\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s00239-007-9040-x","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,2,21]],"date-time":"2024-02-21T16:06:06Z","timestamp":1708531566000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/s00239-007-9040-x"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2008,1,24]]},"references-count":34,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2008,2]]}},"alternative-id":["9040"],"URL":"https:\/\/doi.org\/10.1007\/s00239-007-9040-x","relation":{},"ISSN":["0022-2844","1432-1432"],"issn-type":[{"value":"0022-2844","type":"print"},{"value":"1432-1432","type":"electronic"}],"subject":[],"published":{"date-parts":[[2008,1,24]]}}}