{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,5]],"date-time":"2026-01-05T18:15:53Z","timestamp":1767636953620,"version":"3.48.0"},"reference-count":52,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2025,5,31]],"date-time":"2025-05-31T00:00:00Z","timestamp":1748649600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2025,5,31]],"date-time":"2025-05-31T00:00:00Z","timestamp":1748649600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"funder":[{"DOI":"10.13039\/501100001807","name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","doi-asserted-by":"publisher","award":["2021\/07365-0"],"award-info":[{"award-number":["2021\/07365-0"]}],"id":[{"id":"10.13039\/501100001807","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100003593","name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","doi-asserted-by":"publisher","award":["304803\/2021-9"],"award-info":[{"award-number":["304803\/2021-9"]}],"id":[{"id":"10.13039\/501100003593","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Curr Genet"],"published-print":{"date-parts":[[2025,12]]},"DOI":"10.1007\/s00294-025-01317-w","type":"journal-article","created":{"date-parts":[[2025,5,31]],"date-time":"2025-05-31T04:40:34Z","timestamp":1748666434000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["First characterization of the resistome, virulome and genomic diversity of Salmonella enterica serovar Inganda: a rare, clinically-related and drug susceptible serovar"],"prefix":"10.1007","volume":"71","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-7506-6181","authenticated-orcid":false,"given":"Felipe Pinheiro","family":"Vilela","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"D\u00e1lia dos Prazeres","family":"Rodrigues","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Marc William","family":"Allard","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1459-9355","authenticated-orcid":false,"given":"Juliana Pfrimer","family":"Falc\u00e3o","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2025,5,31]]},"reference":[{"key":"1317_CR1","doi-asserted-by":"publisher","first-page":"402","DOI":"10.1186\/1471-2164-12-402","volume":"12","author":"NF Alikhan","year":"2011","unstructured":"Alikhan NF, Petty NK, Ben Zakour NL et al (2011) BLAST ring image generator (BRIG): simple prokaryote genome comparisons. BMC Genomics 12:402. https:\/\/doi.org\/10.1186\/1471-2164-12-402","journal-title":"BMC Genomics"},{"issue":"4","key":"1317_CR2","doi-asserted-by":"publisher","first-page":"e1007261","DOI":"10.1371\/journal.pgen.1007261","volume":"5","author":"NF Alikhan","year":"2018","unstructured":"Alikhan NF, Zhou Z, Sergeant MJ et al (2018) A genomic overview of the population structure of Salmonella. PLoS Genet 5(4):e1007261. https:\/\/doi.org\/10.1371\/journal.pgen.1007261","journal-title":"PLoS Genet"},{"key":"1317_CR3","doi-asserted-by":"publisher","first-page":"224","DOI":"10.1016\/j.copbio.2017.11.002","volume":"49","author":"MW Allard","year":"2018","unstructured":"Allard MW, Bell R, Ferreira CM, Gonzalez et al (2018) Genomics of foodborne pathogens for microbial food safety. Curr Opin Biotechnol 49:224\u2013229. https:\/\/doi.org\/10.1016\/j.copbio.2017.11.002","journal-title":"Curr Opin Biotechnol"},{"key":"1317_CR4","doi-asserted-by":"publisher","first-page":"132","DOI":"10.1016\/j.rvsc.2018.11.007","volume":"122","author":"MA Argud\u00edn","year":"2019","unstructured":"Argud\u00edn MA, Hoefer A, Butaye P (2019) Heavy metal resistance in bacteria from animals. Res Vet Sci 122:132\u2013147. https:\/\/doi.org\/10.1016\/j.rvsc.2018.11.007","journal-title":"Res Vet Sci"},{"key":"1317_CR5","doi-asserted-by":"publisher","unstructured":"Autexier C, DuBow MS (1992) The Escherichia coli Mu\/D108 phage ner homologue gene (nlp) is transcribed and evolutionarily conserved among the Enterobacteriaceae. Gene 1;114(1):13\u2013\u20098. https:\/\/doi.org\/10.1016\/0378-1119(92)90701-p","DOI":"10.1016\/0378-1119(92)90701-p"},{"issue":"12","key":"1317_CR6","doi-asserted-by":"publisher","first-page":"3491","DOI":"10.1093\/jac\/dkaa345","volume":"75","author":"V Bortolaia","year":"2020","unstructured":"Bortolaia V, Kaas RS, Ruppe E et al (2020) ResFinder 4.0 for predictions of phenotypes from genotypes. J Antimicrob Chemother 75(12):3491\u20133500. https:\/\/doi.org\/10.1093\/jac\/dkaa345","journal-title":"J Antimicrob Chemother"},{"issue":"2","key":"1317_CR7","doi-asserted-by":"publisher","first-page":"eESP00082020","DOI":"10.1128\/ecosalplus.ESP-0008-2020","volume":"9","author":"EW Brown","year":"2021","unstructured":"Brown EW, Bell R, Zhang G et al (2021) Salmonella genomics in public health and food safety. EcoSal Plus 9(2):eESP00082020. https:\/\/doi.org\/10.1128\/ecosalplus.ESP-0008-2020","journal-title":"EcoSal Plus"},{"key":"1317_CR53","doi-asserted-by":"publisher","unstructured":"Br\u00fcssow H, Canchaya C, Hardt WD (2004) Phagesand the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion. Microbiol Mol Biol Rev 68(3):560\u2013602, table of contents. https:\/\/doi.org\/10.1128\/MMBR.68.3.560-602.2004","DOI":"10.1128\/MMBR.68.3.560-602.2004"},{"issue":"1","key":"1317_CR10","doi-asserted-by":"publisher","first-page":"10478","DOI":"10.1038\/s41598-018-28844-6","volume":"8","author":"F Campioni","year":"2018","unstructured":"Campioni F, Cao G, Kastanis G et al (2018) Changing of the genomic pattern of Salmonella Enteritidis strains isolated in Brazil over a 48 year-period revealed by whole genome SNP analyses. Sci Rep 8(1):10478. https:\/\/doi.org\/10.1038\/s41598-018-28844-6","journal-title":"Sci Rep"},{"issue":"7","key":"1317_CR8","doi-asserted-by":"publisher","first-page":"3895","DOI":"10.1128\/AAC.02412-14","volume":"58","author":"A Carattoli","year":"2014","unstructured":"Carattoli A, Zankari E, Garc\u00eda-Fern\u00e1ndez A et al (2014) In Silico detection and typing of plasmids using plasmidfinder and plasmid multilocus sequence typing. Antimicrob Agents Chemother 58(7):3895\u20133903. https:\/\/doi.org\/10.1128\/AAC.02412-14","journal-title":"Antimicrob Agents Chemother"},{"issue":"11","key":"1317_CR11","doi-asserted-by":"publisher","first-page":"000828v3","DOI":"10.1099\/acmi.0.000828.v3","volume":"6","author":"DG Carneiro","year":"2024","unstructured":"Carneiro DG, Vidigal PMP, Morgan T et al (2024) Genome sequencing and analysis of Salmonella enterica subsp. enterica serotype enteritidis PT4 578: insights into pathogenicity and virulence. Access Microbiol 6(11):000828v3. https:\/\/doi.org\/10.1099\/acmi.0.000828.v3","journal-title":"Access Microbiol"},{"key":"1317_CR43","unstructured":"U.S. Center for Disease Control and Prevention (CDC) (2023) Salmonella - Information for Healthcare Professionals and Laboratories. Available at https:\/\/www.cdc.gov\/salmonella\/general\/technical.html. Accessed in November 13th, 2024"},{"key":"1317_CR42","unstructured":"U.S. Center for Disease Control and Prevention (CDC) (2018) National Enteric Disease Surveillance: Salmonella Annual Report, 2016. Available at https:\/\/www.cdc.gov\/nationalsurveillance\/pdfs\/2016-Salmonella-report-508.pdf"},{"key":"1317_CR9","unstructured":"Center for Disease Control and Prevention (CDC) (2023) Salmonellosis, Nontyphoidal. CDC Yellow Book 2024. Available at https:\/\/wwwnc.cdc.gov\/travel\/yellowbook\/2024\/infections-diseases\/salmonellosis-nontyphoidal"},{"key":"1317_CR12","unstructured":"Clinical and Laboratory Standards Institute (CLSI) (2023) Performance Standards for Antimicrobial Susceptibility Testing. 33th edition. CLSI supplement M100. Wayne, PA: Clinical and Laboratory Standards Institute"},{"issue":"10","key":"1317_CR13","doi-asserted-by":"publisher","first-page":"4012","DOI":"10.1128\/AAC.48.10.4012-4015.2004","volume":"48","author":"DJ Eaves","year":"2004","unstructured":"Eaves DJ, Randall L, Gray DT et al (2004) Prevalence of mutations within the quinolone resistance-determining region of gyrA, gyrB, parC, and ParE and association with antibiotic resistance in quinolone-resistant Salmonella enterica. Antimicrob Agents Chemother 48(10):4012\u20134015. https:\/\/doi.org\/10.1128\/AAC.48.10.4012-4015.2004","journal-title":"Antimicrob Agents Chemother"},{"issue":"2","key":"1317_CR14","doi-asserted-by":"publisher","first-page":"e06406","DOI":"10.2903\/j.efsa.2021.6406","volume":"19","author":"European Food Safety Authority (EFSA), European Center for Disease Prevention and Control (ECDC)","year":"2021","unstructured":"European Food Safety Authority (EFSA), European Center for Disease Prevention and Control (ECDC) (2021) The European union one health 2019 zoonoses report. EFSA J 19(2):e06406. https:\/\/doi.org\/10.2903\/j.efsa.2021.6406","journal-title":"EFSA J"},{"issue":"1","key":"1317_CR15","doi-asserted-by":"publisher","first-page":"75","DOI":"10.2174\/0929867324666170330091438","volume":"25","author":"G Faa","year":"2018","unstructured":"Faa G, Gerosa C, Fanni D et al (2018) Gold - Old drug with new potentials. Curr Med Chem 25(1):75\u201384. https:\/\/doi.org\/10.2174\/0929867324666170330091438","journal-title":"Curr Med Chem"},{"issue":"11","key":"1317_CR16","doi-asserted-by":"publisher","first-page":"e00483","DOI":"10.1128\/AAC.00483-19","volume":"63","author":"M Feldgarden","year":"2019","unstructured":"Feldgarden M, Brover V, Haft DH et al (2019) Validating the amrfinder tool and resistance gene database by using antimicrobial resistance Genotype-Phenotype correlations in a collection of isolates. Antimicrob Agents Chemother 63(11):e00483\u2013e00419. https:\/\/doi.org\/10.1128\/AAC.00483-19","journal-title":"Antimicrob Agents Chemother"},{"issue":"211","key":"1317_CR17","doi-asserted-by":"publisher","first-page":"374","DOI":"10.1186\/s12864-020-6765-z","volume":"26","author":"R Gao","year":"2020","unstructured":"Gao R, Naushad S, Moineau S et al (2020) Comparative genomic analysis of 142 bacteriophages infecting Salmonella enterica subsp. enterica. BMC Genomics 26(211):374. https:\/\/doi.org\/10.1186\/s12864-020-6765-z","journal-title":"BMC Genomics"},{"issue":"1\u20132","key":"1317_CR18","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1159\/000342709","volume":"16","author":"MW Gilmour","year":"2013","unstructured":"Gilmour MW, Graham M, Reimer A et al (2013) Public health genomics and the new molecular epidemiology of bacterial pathogens. Public Health Genomics 16(1\u20132):25\u201330. https:\/\/doi.org\/10.1159\/000342709","journal-title":"Public Health Genomics"},{"issue":"13","key":"1317_CR19","doi-asserted-by":"publisher","first-page":"4614","DOI":"10.1073\/pnas.0400932101","volume":"101","author":"E Haghjoo","year":"2004","unstructured":"Haghjoo E, Gal\u00e1n JE (2004) Salmonella typhi encodes a functional cytolethal distending toxin that is delivered into host cells by a bacterial-internalization pathway. Proc Natl Acad Sci USA 101(13):4614\u20134619. https:\/\/doi.org\/10.1073\/pnas.0400932101","journal-title":"Proc Natl Acad Sci USA"},{"issue":"5","key":"1317_CR20","doi-asserted-by":"publisher","first-page":"591","DOI":"10.1111\/zph.13140","volume":"71","author":"LA Hasegawa","year":"2024","unstructured":"Hasegawa LA, Vilela FP, Falc\u00e3o JP (2024) Antimicrobial resistance, virulence potential and genomic epidemiology of global genomes of the rare Salmonella enterica serovar Orion. Zoonoses Public Health 71(5):591\u2013599. https:\/\/doi.org\/10.1111\/zph.13140","journal-title":"Zoonoses Public Health"},{"key":"1317_CR21","doi-asserted-by":"publisher","first-page":"481","DOI":"10.3389\/fimmu.2014.00481","volume":"5","author":"D Hurley","year":"2014","unstructured":"Hurley D, McCusker MP, Fanning S et al (2014) Salmonella-host interactions - modulation of the host innate immune system. Front Immunol 5:481. https:\/\/doi.org\/10.3389\/fimmu.2014.00481","journal-title":"Front Immunol"},{"issue":"10369","key":"1317_CR22","doi-asserted-by":"publisher","first-page":"2221","DOI":"10.1016\/S0140-6736(22)02185-7","volume":"400","author":"KS Ikuta","year":"2022","unstructured":"Ikuta KS, Swetschinski LR, Aguilar GR et al (2022) Global mortality associated with 33 bacterial pathogens in 2019: a systematic analysis for the global burden of disease study 2019. Lancet 400(10369):2221\u20132248. https:\/\/doi.org\/10.1016\/S0140-6736(22)02185-7","journal-title":"Lancet"},{"key":"1317_CR23","doi-asserted-by":"publisher","unstructured":"Ju X, Wang S, Yang X et al (2022) Epidemiology and Molecular Characteristics of mcr-9 in Citrobacter spp. from Healthy Individuals and Patients in China. Microbiol Spectr 10(6):e0134622. https:\/\/doi.org\/10.1128\/spectrum.01346-22","DOI":"10.1128\/spectrum.01346-22"},{"key":"1317_CR24","doi-asserted-by":"crossref","unstructured":"Kingsley RA, Humphries AD, Weening EH et al (2003) Molecular and phenotypic analysis of the CS54 Island of Salmonella enterica serotype typhimurium: identification of intestinal colonization and persistence determinants. Infect Immun 71(2):629\u2013640. https:\/\/doi.org\/10.1128\/IAI.71.2.629\u2013640.2003","DOI":"10.1128\/IAI.71.2.629-640.2003"},{"key":"1317_CR25","doi-asserted-by":"crossref","unstructured":"Kraychete GB, Botelho LAB, Monteiro-Dias PV et al (2022) qnrVC occurs in different genetic contexts in Klebsiella and Enterobacter strains isolated from Brazilian coastal waters. J Glob Antimicrob Resist 31:38\u201344. https:\/\/doi.org\/10.1016\/j.jgar.2022.08.004","DOI":"10.1016\/j.jgar.2022.08.004"},{"issue":"4","key":"1317_CR26","doi-asserted-by":"publisher","first-page":"1355","DOI":"10.1128\/JCM.06094-11","volume":"50","author":"MV Larsen","year":"2012","unstructured":"Larsen MV, Cosentino S, Rasmussen S et al (2012) Multilocus sequence typing of total-genome-sequenced bacteria. J Clin Microbiol 50(4):1355\u20131361. https:\/\/doi.org\/10.1128\/JCM.06094-11","journal-title":"J Clin Microbiol"},{"issue":"121","key":"1317_CR27","doi-asserted-by":"publisher","first-page":"20553","DOI":"10.1038\/s41598-022-22168-2","volume":"29","author":"W Lee","year":"2022","unstructured":"Lee W, Kim E, Zin H et al (2022) Genomic characteristics and comparative genomics analysis of Salmonella enterica subsp. enterica serovar Thompson isolated from an outbreak in South Korea. Sci Rep 29(121):20553. https:\/\/doi.org\/10.1038\/s41598-022-22168-2","journal-title":"Sci Rep"},{"key":"1317_CR28","doi-asserted-by":"crossref","unstructured":"Liu B, Zheng D, Jin Q et al (2019) VFDB 2019: a comparative pathogenomic platform with an interactive web interface. Nucleic Acids Res 47D1:D687\u2013D692. https:\/\/doi.org\/110.1093\/nar\/gky1080","DOI":"10.1093\/nar\/gky1080"},{"issue":"5","key":"1317_CR30","doi-asserted-by":"publisher","first-page":"947","DOI":"10.3390\/microorganisms9050947","volume":"9","author":"M Meneguzzi","year":"2021","unstructured":"Meneguzzi M, Pissetti C, Rebelatto R et al (2021) Re-Emergence of salmonellosis in hog farms: outbreak and bacteriological characterization. Microorganisms 9(5):947. https:\/\/doi.org\/10.3390\/microorganisms9050947","journal-title":"Microorganisms"},{"key":"1317_CR31","doi-asserted-by":"publisher","first-page":"103601","DOI":"10.1016\/j.fm.2020.103601","volume":"93","author":"DFM Monte","year":"2021","unstructured":"Monte DFM, Nethery MA, Barrangou R (2021) Whole-genome sequencing analysis and CRISPR genotyping of rare antibiotic-resistant Salmonella enterica serovars isolated from food and related sources. Food Microbiol 93:103601. https:\/\/doi.org\/10.1016\/j.fm.2020.103601","journal-title":"Food Microbiol"},{"issue":"9","key":"1317_CR32","first-page":"1803","volume":"13","author":"MA Nossair","year":"2023","unstructured":"Nossair MA, Habib HM, Mansour AM et al (2023) Antimicrobial resistance of Salmonella species isolated from some food products and human in Alexandria, Egypt. J Adv Vet Anim Res 13(9):1803\u20131808","journal-title":"J Adv Vet Anim Res"},{"issue":"1","key":"1317_CR33","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1179\/2047773213Y.0000000118","volume":"108","author":"KM Osman","year":"2014","unstructured":"Osman KM, Marouf SH, Zolnikov TR et al (2014) Isolation and characterization of Salmonella enterica in day-old ducklings in Egypt. Pathog Glob Health 108(1):37\u201348. https:\/\/doi.org\/10.1179\/2047773213Y.0000000118","journal-title":"Pathog Glob Health"},{"key":"1317_CR34","doi-asserted-by":"publisher","first-page":"126311","DOI":"10.1016\/j.micres.2019.126311","volume":"229","author":"D Pradhan","year":"2019","unstructured":"Pradhan D, Devi Negi V (2019) Stress-induced adaptations in Salmonella: A ground for shaping its pathogenesis. Microbiol Res 229:126311. https:\/\/doi.org\/10.1016\/j.micres.2019.126311","journal-title":"Microbiol Res"},{"issue":"1","key":"1317_CR35","doi-asserted-by":"publisher","first-page":"59","DOI":"10.1186\/s13099-021-00458-w","volume":"13","author":"J Qin","year":"2021","unstructured":"Qin J, Zhao Y, Wang A et al (2021) Comparative genomic characterization of multidrug-resistant Citrobacter spp. Strains in Fennec Fox imported to China. Gut Pathog 13(1):59. https:\/\/doi.org\/10.1186\/s13099-021-00458-w","journal-title":"Gut Pathog"},{"key":"1317_CR36","doi-asserted-by":"publisher","first-page":"103748","DOI":"10.1016\/j.micpath.2019.103748","volume":"137","author":"T Rehman","year":"2019","unstructured":"Rehman T, Yin L, Latif MB et al (2019) Adhesive mechanism of different Salmonella fimbrial adhesins. Microb Pathog 137:103748. https:\/\/doi.org\/10.1016\/j.micpath.2019.103748","journal-title":"Microb Pathog"},{"issue":"3","key":"1317_CR37","doi-asserted-by":"publisher","first-page":"e00009","DOI":"10.1128\/mSystems.00009-16","volume":"1","author":"L Roer","year":"2016","unstructured":"Roer L, Hendriksen RS, Leekitcharoenphon P et al (2016) Is the evolution of Salmonella enterica subsp. enterica linked to Restriction-Modification systems?? mSystems 1(3):e00009\u201316. https:\/\/doi.org\/10.1128\/mSystems.00009-16","journal-title":"mSystems"},{"issue":"4","key":"1317_CR38","doi-asserted-by":"publisher","first-page":"653","DOI":"10.1093\/molbev\/msg074","volume":"20","author":"SJ Salipante","year":"2003","unstructured":"Salipante SJ, Hall BG (2003) Determining the limits of the evolutionary potential of an antibiotic resistance gene. Mol Biol Evol 20(4):653\u2013659. https:\/\/doi.org\/10.1093\/molbev\/msg074","journal-title":"Mol Biol Evol"},{"key":"1317_CR39","doi-asserted-by":"publisher","first-page":"104977","DOI":"10.1016\/j.meegid.2021.104977","volume":"93","author":"AA Seribelli","year":"2021","unstructured":"Seribelli AA, da Silva P, Fraz\u00e3o MR et al (2021) Phylogenetic relationship and genomic characterization of Salmonella Typhimurium strains isolated from swine in Brazil. Infect Genet Evol 93:104977. https:\/\/doi.org\/10.1016\/j.meegid.2021.104977","journal-title":"Infect Genet Evol"},{"issue":"6","key":"1317_CR40","doi-asserted-by":"publisher","first-page":"e100881","DOI":"10.1371\/journal.pone.0100881","volume":"9","author":"S Song","year":"2014","unstructured":"Song S, Hwang S, Lee S et al (2014) Interaction mediated by the putative tip regions of MdsA and MdsC in the formation of a Salmonella-Specific tripartite efflux pump. PLoS ONE 9(6):e100881","journal-title":"PLoS ONE"},{"key":"1317_CR41","doi-asserted-by":"publisher","unstructured":"Summer EJ, Gonzalez CF, Carlisle T et al (2004) Burkholderia cenocepacia phage BcepMu and a family of Mu-like phages encoding potential pathogenesis factors. J Mol Biol 25(1):49\u201365. https:\/\/doi.org\/10.1016\/j.jmb.2004.04.053","DOI":"10.1016\/j.jmb.2004.04.053"},{"issue":"963","key":"1317_CR44","first-page":"368","volume":"1959","author":"E Van Oye","year":"1959","unstructured":"Van Oye E, Lucasse C, Herin V et al (1959) 3 New serotypes of Salmonellae isolated in the Belgian congo: Salmonella Inganda, Ipeko & Bolombo. Ann Inst Pasteur (Paris) 1959(963):368\u2013370","journal-title":"Ann Inst Pasteur (Paris)"},{"issue":"4","key":"1317_CR45","doi-asserted-by":"publisher","first-page":"3327","DOI":"10.1111\/jam.15430","volume":"132","author":"FP Vilela","year":"2022","unstructured":"Vilela FP, Rodrigues DDP, Allard MW et al (2022) Genomic characterization and antimicrobial resistance profiles of Salmonella enterica serovar infantis isolated from food, humans and veterinary-related sources in Brazil. J Appl Microbiol 132(4):3327\u20133342. https:\/\/doi.org\/10.1111\/jam.15430","journal-title":"J Appl Microbiol"},{"key":"1317_CR46","doi-asserted-by":"publisher","unstructured":"Vilela FP, Rodrigues DDP, Allard MW et al (2023) The rare Salmonella enterica serovar Isangi: genomic characterization of the antimicrobial resistance, virulence potential and epidemiology of Brazilian strains in comparison to global isolates. J Med Microbiol 72(7). https:\/\/doi.org\/10.1099\/jmm.0.001736","DOI":"10.1099\/jmm.0.001736"},{"key":"1317_CR47","doi-asserted-by":"publisher","unstructured":"Wang M, Qazi IH, Wang L et al (2020) Salmonella virulence and immune escape. Microorganisms 8(3). https:\/\/doi.org\/10.3390\/microorganisms8030407","DOI":"10.3390\/microorganisms8030407"},{"issue":"3","key":"1317_CR48","doi-asserted-by":"publisher","first-page":"nwac269","DOI":"10.1093\/nsr\/nwac269","volume":"10","author":"Y Wang","year":"2022","unstructured":"Wang Y, Liu Y, Lyu N et al (2022) The Temporal dynamics of antimicrobial-resistant Salmonella enterica and predominant serovars in China. Natl Sci Rev 10(3):nwac269. https:\/\/doi.org\/10.1093\/nsr\/nwac269","journal-title":"Natl Sci Rev"},{"issue":"W1","key":"1317_CR49","doi-asserted-by":"publisher","first-page":"W443","DOI":"10.1093\/nar\/gkad382","volume":"51","author":"DS Wishart","year":"2023","unstructured":"Wishart DS, Han S, Saha S et al (2023) PHASTEST: faster than PHASTER, better than PHAST. Nucleic Acids Res 51(W1):W443\u2013W450. https:\/\/doi.org\/10.1093\/nar\/gkad382","journal-title":"Nucleic Acids Res"},{"key":"1317_CR50","unstructured":"World Health Organization (WHO) (2018) Salmonella (non-typhoidal). Available at https:\/\/www.who.int\/news-room\/fact-sheets\/detail\/salmonella-(non-typhoidal). Accessed in June 13th, 2023"},{"key":"1317_CR51","doi-asserted-by":"publisher","unstructured":"Zaki MSA, Abd-El-All AMM, Attia ASA et al (2024) Escherichia coli and Salmonella enterica isolated from Egyptian dairy cattle herds: The prevalence and molecular characteristics. Open Vet J 14(1):214\u2013224. https:\/\/doi.org\/10.5455\/OVJ.2024.v14.i1.19","DOI":"10.5455\/OVJ.2024.v14.i1.19"},{"issue":"4","key":"1317_CR52","doi-asserted-by":"publisher","first-page":"1974","DOI":"10.1128\/IAI.67.4.1974-1981.1999","volume":"67","author":"D Zhou","year":"1999","unstructured":"Zhou D, Hardt WD, Gal\u00e1n JE (1999) Salmonella Typhimurium encodes a putative iron transport system within the centisome 63 pathogenicity Island. Infect Immun 67(4):1974\u20131981. https:\/\/doi.org\/10.1128\/IAI.67.4.1974-1981.1999","journal-title":"Infect Immun"}],"container-title":["Current Genetics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00294-025-01317-w.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s00294-025-01317-w","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00294-025-01317-w.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,1,5]],"date-time":"2026-01-05T14:26:12Z","timestamp":1767623172000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s00294-025-01317-w"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,5,31]]},"references-count":52,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2025,12]]}},"alternative-id":["1317"],"URL":"https:\/\/doi.org\/10.1007\/s00294-025-01317-w","relation":{},"ISSN":["0172-8083","1432-0983"],"issn-type":[{"type":"print","value":"0172-8083"},{"type":"electronic","value":"1432-0983"}],"subject":[],"published":{"date-parts":[[2025,5,31]]},"assertion":[{"value":"26 February 2025","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"6 May 2025","order":2,"name":"revised","label":"Revised","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"16 May 2025","order":3,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"31 May 2025","order":4,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"no ethical approval was necessary for the present study.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Ethical approval"}},{"value":"not applicable.","order":3,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent to participate"}},{"value":"all authors agreed with the final version of the manuscript.","order":4,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent for publication"}},{"value":"The authors declare no competing interests.","order":5,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}},{"value":"This content has been made available to all.","name":"free","label":"Free to read"}],"article-number":"13"}}