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The selection of tolerant varieties to <jats:italic>T. absoluta<\/jats:italic> is one of the sustainable approaches to control this invasive leafminer. In this study, the genomic diversity of two tomato varieties, one tolerant and the other susceptible to <jats:italic>T. absoluta<\/jats:italic> infestation was explored, allowing us to identify chromosome regions with highly dissimilar pattern. Genes affected by potential functional variants were involved in several processes, including response to herbivory and secondary metabolism. A metabolic analysis for volatile organic compounds (VOCs) was also performed, highlighting a difference in several classes of chemicals in the two genotypes. Taken together, these findings can aid tomato breeding programs aiming to develop tolerant plants to <jats:italic>T. absoluta<\/jats:italic>.\n<\/jats:p>\n              <\/jats:sec>","DOI":"10.1007\/s00425-023-04073-8","type":"journal-article","created":{"date-parts":[[2023,1,28]],"date-time":"2023-01-28T15:14:10Z","timestamp":1674918850000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":10,"title":["Genomic and metabolic profiling of two tomato contrasting cultivars for tolerance to Tuta absoluta"],"prefix":"10.1007","volume":"257","author":[{"given":"Daniela","family":"D\u2019Esposito","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Anna","family":"Guadagno","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ciro Gianmaria","family":"Amoroso","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Pasquale","family":"Cascone","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Gabriele","family":"Cencetti","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Marco","family":"Michelozzi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0583-4667","authenticated-orcid":false,"given":"Emilio","family":"Guerrieri","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4475-6112","authenticated-orcid":false,"given":"Maria Raffaella","family":"Ercolano","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2023,1,28]]},"reference":[{"key":"4073_CR1","doi-asserted-by":"publisher","first-page":"1526","DOI":"10.1074\/mcp.RA119.001367","volume":"18","author":"FH Ahmad","year":"2019","unstructured":"Ahmad FH, Wu XN, Stintzi A, Schaller A, Schulze WX (2019) The systemin signaling cascade as derived from time course analyses of the systemin-responsive phosphoproteome. 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