{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,21]],"date-time":"2026-09-21T08:03:17Z","timestamp":1789977797250,"version":"4.0.1"},"reference-count":125,"publisher":"Springer Science and Business Media LLC","issue":"4","license":[{"start":{"date-parts":[[2026,8,17]],"date-time":"2026-08-17T00:00:00Z","timestamp":1786924800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0"},{"start":{"date-parts":[[2026,8,17]],"date-time":"2026-08-17T00:00:00Z","timestamp":1786924800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0"}],"funder":[{"DOI":"10.13039\/100009065","name":"Centre of Excellence and Applied Sport Science Research, Queensland Academy of Sport","doi-asserted-by":"publisher","award":["BPIDUB.4610.174.2022"],"award-info":[{"award-number":["BPIDUB.4610.174.2022"]}],"id":[{"id":"10.13039\/100009065","id-type":"DOI","asserted-by":"publisher"}]},{"name":"funding provided by the Department of Plant Developmental Biology","award":["501\/73\/10110\/MPK 2599150000\/2026"],"award-info":[{"award-number":["501\/73\/10110\/MPK 2599150000\/2026"]}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Planta"],"published-print":{"date-parts":[[2026,10]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:sec>\n                    <jats:title>Main Conclusion<\/jats:title>\n                    <jats:p>Our review illustrates how the dexamethasone-inducible LhGR\/pOp system has been used across numerous tissues\/organs and plant species, and summarizes the resources and inducer application procedures established to date.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Abstract<\/jats:title>\n                    <jats:p>\n                      The establishment of groundbreaking molecular biology tools has enabled the rapid advancement of research based on the model plant\n                      <jats:italic>Arabidopsis<\/jats:italic>\n                      , which currently strongly benefits non-model but economically important species. Spatiotemporal control of transgene expression via the chemically inducible system GR-LhG4\/pOp has proven to be a particularly powerful, universal and non-invasive experimental approach. This review characterizes the mechanism of action of GR-LhG4\/pOp and synthesizes information on available GR-LhG4 transgenic lines and inductor (dexamethasone) application procedures across various plant tissues. Moreover, feasible experimental approaches are depicted that range from classical ones aiming at selected genes overexpression or silencing to highly innovative ones, like those integrating the GR-LhG4\/pOp system with CRISPR-Cas for targeted ablation of specific cell types. Information about the existing GR-LhG4\/pOp lines from non-\n                      <jats:italic>Arabidopsis<\/jats:italic>\n                      plants is also provided, in hope that this sophisticated but universal research tool will become more exploited in crop research.\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.1007\/s00425-026-05123-7","type":"journal-article","created":{"date-parts":[[2026,8,17]],"date-time":"2026-08-17T16:07:22Z","timestamp":1786982842000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Dexamethasone-inducible LhGR\/pOp system: simple and flexible spatiotemporal control of gene expression"],"prefix":"10.1007","volume":"264","author":[{"given":"Zuzanna","family":"Majewska","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Grzegorz","family":"Jursza","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9540-4694","authenticated-orcid":false,"given":"Alicja","family":"Dolzblasz","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2026,8,17]]},"reference":[{"key":"5123_CR1","doi-asserted-by":"publisher","first-page":"700","DOI":"10.1105\/tpc.17.00785","volume":"30","author":"M Adamowski","year":"2018","unstructured":"Adamowski M, Narasimhan M, Kania U, De Jaeger G, Friml J (2018) A functional study of AUXILIN-LIKE1 and 2; two putative clathrin uncoating factors in Arabidopsis. Plant Cell 30:700\u2013716. https:\/\/doi.org\/10.1105\/tpc.17.00785","journal-title":"Plant Cell"},{"key":"5123_CR2","doi-asserted-by":"publisher","first-page":"49","DOI":"10.1007\/s11101-005-3747-3","volume":"5","author":"A Aharoni","year":"2006","unstructured":"Aharoni A, Jongsma MA, Kim TY, Ri MB, Giri AP, Verstappen FW, Schwab W, Bouwmeester HJ (2006) Metabolic engineering of terpenoid biosynthesis in plants. Phytochem Rev 5:49\u201358","journal-title":"Phytochem Rev"},{"key":"5123_CR3","doi-asserted-by":"publisher","first-page":"1546819","DOI":"10.3389\/fpls.2025.1546819","volume":"16","author":"D Balkova","year":"2025","unstructured":"Balkova D, Mala K, Hejatko J, Panzarova K, Abdelhakim L, Pleskacova B, Samalova M (2025) Differential expression and localization of expansins in Arabidopsis shoots: implications for cell wall dynamics and drought tolerance. Front Plant Sci 16:1546819","journal-title":"Front Plant Sci"},{"key":"5123_CR4","doi-asserted-by":"publisher","DOI":"10.1002\/tpg2.70022","volume":"18","author":"T Barff","year":"2025","unstructured":"Barff T, Sanchez Carrillo IB, Parra Guti\u00e9rrez VP, Plourde MB, Joly DL, Germain H (2025) Comprehensive mapping of Arabidopsis alternative splicing landscape reveals key insights into plant development and immunity. Plant Genome 18:e70022. https:\/\/doi.org\/10.1002\/tpg2.70022","journal-title":"Plant Genome"},{"key":"5123_CR5","doi-asserted-by":"publisher","first-page":"1219","DOI":"10.1016\/j.molp.2020.06.008","volume":"13","author":"P Barone","year":"2020","unstructured":"Barone P, Wu E, Lenderts B, Anand A, Gordon-Kamm W, Svitashev S, Kumar S (2020) Efficient gene targeting in maize using inducible CRISPR-Cas9 and marker-free donor template. Mol Plant 13:1219\u20131227. https:\/\/doi.org\/10.1016\/j.molp.2020.06.008","journal-title":"Mol Plant"},{"issue":"5","key":"5123_CR7","doi-asserted-by":"publisher","DOI":"10.1093\/plcell\/koaf087","volume":"37","author":"MW Bevan","year":"2025","unstructured":"Bevan MW, Messerer M, Gundlach H, Kamal N, Hall A, Spannagl M, Mayer KFX (2025) Integrating Arabidopsis and crop species gene discovery for crop improvement. Plant Cell 37(5):koaf087. https:\/\/doi.org\/10.1093\/plcell\/koaf087","journal-title":"Plant Cell"},{"key":"5123_CR8","doi-asserted-by":"publisher","first-page":"1173","DOI":"10.1038\/emboj.2011.14","volume":"30","author":"R Blanvillain","year":"2011","unstructured":"Blanvillain R, Young B, Cai YM, Hecht V, Varoquaux F, Delorme V, Lancelin JM, Delseny M, Gallois P (2011) The Arabidopsis peptide kiss of death is an inducer of programmed cell death. EMBO J 30:1173\u20131183. https:\/\/doi.org\/10.1038\/emboj.2011.14","journal-title":"EMBO J"},{"key":"5123_CR9","doi-asserted-by":"publisher","first-page":"65","DOI":"10.1007\/978-1-60761-765-5_5","volume":"655","author":"L Borghi","year":"2010","unstructured":"Borghi L (2010) Inducible gene expression systems for plants. Methods Mol Biol 655:65\u201375. https:\/\/doi.org\/10.1007\/978-1-60761-765-5_5","journal-title":"Methods Mol Biol"},{"key":"5123_CR10","doi-asserted-by":"publisher","first-page":"41","DOI":"10.1016\/j.biotechadv.2014.12.006","volume":"33","author":"L Bortesi","year":"2015","unstructured":"Bortesi L, Fischer R (2015) The CRISPR\/Cas9 system for plant genome editing and beyond. Biotechnol Adv 33:41\u201352. https:\/\/doi.org\/10.1016\/j.biotechadv.2014.12.006","journal-title":"Biotechnol Adv"},{"key":"5123_CR11","doi-asserted-by":"publisher","DOI":"10.3389\/fpls.2022.888201","volume":"13","author":"MS Bush","year":"2022","unstructured":"Bush MS, Sethi V, Sablowski R (2022) A phloem-expressed PECTATE LYASE-LIKE gene promotes cambium and xylem development. Front Plant Sci 13:888201. https:\/\/doi.org\/10.3389\/fpls.2022.888201","journal-title":"Front Plant Sci"},{"key":"5123_CR12","doi-asserted-by":"publisher","DOI":"10.7554\/eLife.27421","volume":"6","author":"MP Caggiano","year":"2017","unstructured":"Caggiano MP, Yu X, Bhatia N, Larsson A, Ram H, Ohno CK, Sappl P, Meyerowitz EM, J\u00f6nsson H, Heisler MG (2017) Cell type boundaries organize plant development. Elife 6:e27421. https:\/\/doi.org\/10.7554\/eLife.27421","journal-title":"Elife"},{"key":"5123_CR13","doi-asserted-by":"publisher","first-page":"4193","DOI":"10.1093\/jxb\/ert227","volume":"64","author":"M \u010cern\u00fd","year":"2013","unstructured":"\u010cern\u00fd M, Kuklov\u00e1 A, Hoehenwarter W, Fragner L, Nov\u00e1k O, Rotkov\u00e1 G, Jedelsk\u00fd PL, \u017d\u00e1kov\u00e1 K, \u0160mehilov\u00e1 M, Strnad M, Weckwerth W, Brzobohat\u00fd B (2013) Proteome and metabolome profiling of cytokinin action in Arabidopsis identifying both distinct and similar responses to cytokinin down- and up-regulation. J Exp Bot 64:4193\u20134206. https:\/\/doi.org\/10.1093\/jxb\/ert227","journal-title":"J Exp Bot"},{"key":"5123_CR14","doi-asserted-by":"publisher","first-page":"1641","DOI":"10.1111\/pce.12270","volume":"37","author":"M \u010cern\u00fd","year":"2014","unstructured":"\u010cern\u00fd M, Jedelsk\u00fd PL, Nov\u00e1k J, Schlosser A, Brzobohat\u00fd B (2014) Cytokinin modulates temperature-shock responses. Plant Cell Environ 37:1641\u20131655. https:\/\/doi.org\/10.1111\/pce.12270","journal-title":"Plant Cell Environ"},{"key":"5123_CR15","doi-asserted-by":"publisher","first-page":"899","DOI":"10.1111\/j.1365-313X.2005.02342.x","volume":"41","author":"J Craft","year":"2005","unstructured":"Craft J, Samalova M, Baroux C, Townley H, Martinez A, Jepson I, Tsiantis M, Moore I (2005) New pOp\/LhG4 vectors for stringent glucocorticoid-dependent transgene expression in Arabidopsis. Plant J 41:899\u2013918. https:\/\/doi.org\/10.1111\/j.1365-313X.2005.02342.x","journal-title":"Plant J"},{"key":"5123_CR16","doi-asserted-by":"publisher","first-page":"1699","DOI":"10.1016\/j.cub.2012.07.005","volume":"22","author":"R Dello Ioio","year":"2012","unstructured":"Dello Ioio R, Galinha C, Fletcher AG, Grigg SP, Molnar A, Willemsen V, Scheres B, Sabatini S, Baulcombe D, Maini PK, Tsiantis M (2012) A PHABULOSA\/cytokinin feedback loop controls root growth in Arabidopsis. Curr Biol 22:1699\u20131704. https:\/\/doi.org\/10.1016\/j.cub.2012.07.005","journal-title":"Curr Biol"},{"key":"5123_CR17","doi-asserted-by":"publisher","first-page":"1169","DOI":"10.1111\/tpj.16378","volume":"115","author":"M Don\u00e0","year":"2023","unstructured":"Don\u00e0 M, Bradamante G, Bogojevic Z, Gutzat R, Streubel S, Mosiolek M, Dolan L, Mittelsten Scheid O (2023) A versatile CRISPR-based system for lineage tracing in living plants. Plant J 115:1169\u20131184. https:\/\/doi.org\/10.1111\/tpj.16378","journal-title":"Plant J"},{"key":"5123_CR18","doi-asserted-by":"publisher","first-page":"483","DOI":"10.1038\/s41477-024-01629-8","volume":"10","author":"L Elliott","year":"2024","unstructured":"Elliott L, Kalde M, Sch\u00fcrholz AK, Zhang X, Wolf S, Moore I, Kirchhelle C (2024) A self-regulatory cell-wall-sensing module at cell edges controls plant growth. Nat Plants 10:483\u2013493. https:\/\/doi.org\/10.1038\/s41477-024-01629-8","journal-title":"Nat Plants"},{"key":"5123_CR19","doi-asserted-by":"publisher","first-page":"R970","DOI":"10.1016\/j.cub.2024.07.050","volume":"34","author":"A Emonet","year":"2024","unstructured":"Emonet A, Hay A (2024) Explosive seed dispersal. Curr Biol 34:R970\u2013R972","journal-title":"Curr Biol"},{"key":"5123_CR20","doi-asserted-by":"publisher","DOI":"10.1093\/plcell\/koag062","volume":"38","author":"RC Eng","year":"2026","unstructured":"Eng RC, Emonet A, Neumann U, Pauly M, Hay A (2026) CESA7 and microtubules pattern complex secondary cell walls in explosive fruit of Cardamine hirsuta. Plant Cell 38:koag062","journal-title":"Plant Cell"},{"key":"5123_CR21","doi-asserted-by":"publisher","DOI":"10.3390\/ijms241411425","volume":"24","author":"ECF Forestier","year":"2023","unstructured":"Forestier ECF, Cording AC, Loake GJ, Graham IA (2023) An engineered heat-inducible expression system for the production of casbene in Nicotiana benthamiana. Int J Mol Sci 24:11425. https:\/\/doi.org\/10.3390\/ijms241411425","journal-title":"Int J Mol Sci"},{"key":"5123_CR22","doi-asserted-by":"publisher","first-page":"2041","DOI":"10.1111\/nph.19102","volume":"239","author":"F Gehrke","year":"2023","unstructured":"Gehrke F, Ruiz-Duarte P, Schindele A, Wolf S, Puchta H (2023) An inducible CRISPR-Kill system for temporally controlled cell type-specific cell ablation in Arabidopsis thaliana. New Phytol 239:2041\u20132052. https:\/\/doi.org\/10.1111\/nph.19102","journal-title":"New Phytol"},{"key":"5123_CR23","doi-asserted-by":"publisher","DOI":"10.1007\/s00425-020-03545-5","volume":"253","author":"D Glowa","year":"2021","unstructured":"Glowa D, Comelli P, Chandler JW, Werr W (2021) Clonal sector analysis and cell ablation confirm a function for DORNROESCHEN-LIKE in founder cells and the vasculature in Arabidopsis. Planta 253:27. https:\/\/doi.org\/10.1007\/s00425-020-03545-5","journal-title":"Planta"},{"key":"5123_CR24","doi-asserted-by":"publisher","first-page":"4394","DOI":"10.1016\/j.cub.2025.07.065","volume":"35","author":"I Gonz\u00e1lez-Cuadra","year":"2025","unstructured":"Gonz\u00e1lez-Cuadra I, Ferr\u00e1ndiz C, Merelo P (2025) Local regulation of auxin-related pathways in the shoot apical meristem plays a major role during proliferative arrest. Curr Biol 35:4394-4407.e3. https:\/\/doi.org\/10.1016\/j.cub.2025.07.065","journal-title":"Curr Biol"},{"key":"5123_CR25","doi-asserted-by":"publisher","first-page":"141","DOI":"10.1186\/1471-2229-9-141","volume":"9","author":"M G\u00fcnl","year":"2009","unstructured":"G\u00fcnl M, Liew EF, David K, Putterill J (2009) Analysis of a post-translational steroid induction system for GIGANTEA in Arabidopsis. BMC Plant Biol 9:141","journal-title":"BMC Plant Biol"},{"key":"5123_CR26","doi-asserted-by":"publisher","first-page":"4183","DOI":"10.1016\/j.cub.2019.10.040","volume":"29","author":"M Hajheidari","year":"2019","unstructured":"Hajheidari M, Wang Y, Bhatia N, Vuolo F, Franco-Zorrilla JM, Karady M, Mentink RA, Wu A, Oluwatobi BR, M\u00fcller B, Dello Ioio R, Laurent S, Ljung K, Huijser P, Gan X, Tsiantis M (2019) Autoregulation of RCO by low-affinity binding modulates cytokinin action and shapes leaf diversity. Curr Biol 29:4183-4192.e6. https:\/\/doi.org\/10.1016\/j.cub.2019.10.040","journal-title":"Curr Biol"},{"key":"5123_CR27","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pbio.1000516","volume":"8","author":"MG Heisler","year":"2010","unstructured":"Heisler MG, Hamant O, Krupinski P, Uyttewaal M, Ohno C, J\u00f6nsson H, Traas J, Meyerowitz EM (2010) Alignment between PIN1 polarity and microtubule orientation in the shoot apical meristem reveals a tight coupling between morphogenesis and auxin transport. PLoS Biol 8:e1000516. https:\/\/doi.org\/10.1371\/journal.pbio.1000516","journal-title":"PLoS Biol"},{"key":"5123_CR28","doi-asserted-by":"publisher","first-page":"5597","DOI":"10.3390\/ijms23105597","volume":"23","author":"H Hu","year":"2022","unstructured":"Hu H, Yu F (2022) A CRISPR\/Cas9-based system with controllable auto-excision feature serving cisgenic plant breeding and beyond. Int J Mol Sci 23:5597. https:\/\/doi.org\/10.3390\/ijms23105597","journal-title":"Int J Mol Sci"},{"key":"5123_CR29","doi-asserted-by":"publisher","first-page":"23","DOI":"10.1038\/s41477-024-01854-1","volume":"11","author":"ZC Hu","year":"2025","unstructured":"Hu ZC, Majda M, Sun HR, Zhang Y, Ding YN, Yuan Q, Su TB, L\u00fc TF, Gao F, Xu GX, Smith RS, \u00d8stergaard L, Dong Y (2025) Evolution of a SHOOTMERISTEMLESS transcription factor binding site promotes fruit shape determination. Nat Plants 11:23\u201335. https:\/\/doi.org\/10.1038\/s41477-024-01854-1","journal-title":"Nat Plants"},{"key":"5123_CR30","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0112946","volume":"9","author":"TK Hyun","year":"2014","unstructured":"Hyun TK, van der Graaff E, Albacete A, Eom SH, Gro\u00dfkinsky DK, B\u00f6hm H, Janschek U, Rim Y, Ali WW, Kim SY, Roitsch T (2014) The Arabidopsis PLAT DOMAIN PROTEIN1 is critically involved in abiotic stress tolerance. PLoS ONE 9:e112946. https:\/\/doi.org\/10.1371\/journal.pone.0112946","journal-title":"PLoS ONE"},{"key":"5123_CR31","doi-asserted-by":"publisher","DOI":"10.1016\/j.plantsci.2022.111444","volume":"324","author":"H Ito","year":"2022","unstructured":"Ito H, Saito H, Fukui M, Tanaka A, Arakawa K (2022) Poplar leaf abscission through induced chlorophyll breakdown by Mg-dechelatase. Plant Sci 324:111444. https:\/\/doi.org\/10.1016\/j.plantsci.2022.111444","journal-title":"Plant Sci"},{"key":"5123_CR32","doi-asserted-by":"publisher","first-page":"1560","DOI":"10.1016\/j.cub.2005.07.023","volume":"15","author":"S Jasinski","year":"2005","unstructured":"Jasinski S, Piazza P, Craft J, Hay A, Woolley L, Rieu I, Philips A, Hedden P, Tsiantis M (2005) KNOX action in Arabidopsis is mediated by coordinate regulation of cytokinin and gibberellin activities. Curr Biol 15:1560\u20131565","journal-title":"Curr Biol"},{"key":"5123_CR33","doi-asserted-by":"publisher","first-page":"23371","DOI":"10.1074\/jbc.M109.096644","volume":"285","author":"J Jeon","year":"2010","unstructured":"Jeon J, Kim NY, Kim S, Kang NY, Nov\u00e1k O, Ku SJ, Cho C, Lee DJ, Lee EJ, Strnad M, Kim J (2010) A subset of cytokinin two-component signaling system plays a role in cold temperature stress response in Arabidopsis. J Biol Chem 285:23371\u201323386. https:\/\/doi.org\/10.1074\/jbc.M109.096644","journal-title":"J Biol Chem"},{"key":"5123_CR34","doi-asserted-by":"publisher","first-page":"197","DOI":"10.1186\/s13059-018-1580-4","volume":"19","author":"X Ji","year":"2018","unstructured":"Ji X, Si X, Zhang Y, Zhang H, Zhang F, Gao C (2018) Conferring DNA virus resistance with high specificity in plants using virus-inducible genome-editing system. Genome Biol 19:197. https:\/\/doi.org\/10.1186\/s13059-018-1580-4","journal-title":"Genome Biol"},{"key":"5123_CR35","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1001330","volume":"7","author":"D Jiang","year":"2011","unstructured":"Jiang D, Kong NC, Gu X, Li Z, He Y (2011) Arabidopsis COMPASS-like complexes mediate histone H3 lysine-4 trimethylation to control floral transition and plant development. PLoS Genet 7:e1001330. https:\/\/doi.org\/10.1371\/journal.pgen.1001330","journal-title":"PLoS Genet"},{"key":"5123_CR36","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0079248","volume":"8","author":"NY Kang","year":"2013","unstructured":"Kang NY, Cho C, Kim J (2013) Inducible expression of Arabidopsis response regulator 22 (ARR22), a type-C ARR, in transgenic Arabidopsis enhances drought and freezing tolerance. PLoS ONE 8:e79248. https:\/\/doi.org\/10.1371\/journal.pone.0079248","journal-title":"PLoS ONE"},{"key":"5123_CR37","doi-asserted-by":"publisher","first-page":"1278","DOI":"10.1105\/tpc.106.047076","volume":"19","author":"R Kannangara","year":"2007","unstructured":"Kannangara R, Branigan C, Liu Y, Penfield T, Rao V, Mouille G, Broun P (2007) The transcription factor WIN1\/SHN1 regulates cutin biosynthesis in Arabidopsis thaliana. Plant Cell 19:1278\u20131294","journal-title":"Plant Cell"},{"key":"5123_CR38","doi-asserted-by":"publisher","first-page":"1183","DOI":"10.1104\/pp.107.110411","volume":"145","author":"M Karimi","year":"2007","unstructured":"Karimi M, Bleys A, Vanderhaeghen R, Hilson P (2007) Building blocks for plant gene assembly. Plant Physiol 145:1183\u20131191. https:\/\/doi.org\/10.1104\/pp.107.110411","journal-title":"Plant Physiol"},{"key":"5123_CR39","doi-asserted-by":"publisher","DOI":"10.7554\/eLife.04501","volume":"3","author":"T Kawashima","year":"2014","unstructured":"Kawashima T, Maruyama D, Shagirov M, Li J, Hamamura Y, Yelagandula R, Toyama Y, Berger F (2014) Dynamic F-actin movement is essential for fertilization in Arabidopsis thaliana. Elife 3:e04501. https:\/\/doi.org\/10.7554\/eLife.04501","journal-title":"Elife"},{"key":"5123_CR40","doi-asserted-by":"publisher","first-page":"386","DOI":"10.1016\/j.devcel.2016.01.020","volume":"36","author":"C Kirchhelle","year":"2016","unstructured":"Kirchhelle C, Chow CM, Foucart C, Neto H, Stierhof YD, Kalde M, Moore I (2016) The specification of geometric edges by a plant Rab GTPase is an essential cell-patterning principle during organogenesis in Arabidopsis. Dev Cell 36:386\u2013400","journal-title":"Dev Cell"},{"key":"5123_CR41","doi-asserted-by":"publisher","first-page":"742","DOI":"10.1104\/pp.111.182683","volume":"157","author":"KS Kodaira","year":"2011","unstructured":"Kodaira KS, Qin F, Tran LSP, Maruyama K, Kidokoro S, Fujita Y, Yamaguchi-Shinozaki K (2011) Arabidopsis Cys2\/His2 zinc-finger proteins AZF1 and AZF2 negatively regulate abscisic acid-repressive and auxin-inducible genes under abiotic stress conditions. Plant Physiol 157:742\u2013756","journal-title":"Plant Physiol"},{"key":"5123_CR42","doi-asserted-by":"publisher","first-page":"117","DOI":"10.1093\/oxfordjournals.pcp.a028920","volume":"37","author":"T Konishi","year":"1996","unstructured":"Konishi T, Shinohara K, Yamada K, Sasaki Y (1996) Acetyl-CoA carboxylase in higher plants: most plants other than Gramineae have both the prokaryotic and the eukaryotic forms of this enzyme. Plant Cell Physiol 37:117\u2013122. https:\/\/doi.org\/10.1093\/oxfordjournals.pcp.a028920","journal-title":"Plant Cell Physiol"},{"key":"5123_CR43","doi-asserted-by":"publisher","first-page":"570","DOI":"10.1093\/pcp\/pcn029","volume":"49","author":"A Kuderov\u00e1","year":"2008","unstructured":"Kuderov\u00e1 A, Urb\u00e1nkov\u00e1 I, V\u00e1lkov\u00e1 M, Malbeck J, Brzobohat\u00fd B, N\u00e9methov\u00e1 D, Hej\u00e1tko J (2008) Effects of conditional IPT-dependent cytokinin overproduction on root architecture of Arabidopsis seedlings. Plant Cell Physiol 49:570\u2013582. https:\/\/doi.org\/10.1093\/pcp\/pcn029","journal-title":"Plant Cell Physiol"},{"key":"5123_CR44","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0083043","volume":"8","author":"A Lampropoulos","year":"2013","unstructured":"Lampropoulos A, Sutikovic Z, Wenzl C, Maegele I, Lohmann JU, Forner J (2013) Greengate\u2014a novel, versatile, and efficient cloning system for plant transgenesis. PLoS ONE 8:e83043","journal-title":"PLoS ONE"},{"key":"5123_CR45","doi-asserted-by":"publisher","first-page":"1600","DOI":"10.1093\/pcp\/pct105","volume":"54","author":"HW Lee","year":"2013","unstructured":"Lee HW, Kim J (2013) EXPANSIN A17 up-regulated by LBD18\/ASL20 promotes lateral root formation during the auxin response. Plant Cell Physiol 54:1600\u20131611","journal-title":"Plant Cell Physiol"},{"key":"5123_CR46","doi-asserted-by":"publisher","first-page":"2244","DOI":"10.1111\/pbi.70480","volume":"24","author":"DY Lee","year":"2025","unstructured":"Lee DY, Acosta-Gamboa L, Saleh L, Pathak S, Swyers N, Morgan A, Nusinow DA (2025) Remote sensing of endogenous pigmentation by inducible synthetic circuits in grasses. Plant Biotechnol J 24:2244\u20132259","journal-title":"Plant Biotechnol J"},{"key":"5123_CR47","doi-asserted-by":"publisher","first-page":"598","DOI":"10.1016\/j.molp.2018.01.003","volume":"11","author":"XR Li","year":"2018","unstructured":"Li XR, Deb J, Kumar SV, \u00d8stergaard L (2018) Temperature modulates tissue-specification program to control fruit dehiscence in Brassicaceae. Mol Plant 11:598\u2013606. https:\/\/doi.org\/10.1016\/j.molp.2018.01.003","journal-title":"Mol Plant"},{"key":"5123_CR48","doi-asserted-by":"publisher","first-page":"863","DOI":"10.1016\/j.molp.2019.05.003","volume":"12","author":"XR Li","year":"2019","unstructured":"Li XR, Vroomans RMA, Fox S, Grieneisen VA, \u00d8stergaard L, Mar\u00e9e AFM (2019) Systems biology approach pinpoints minimum requirements for auxin distribution during fruit opening. Mol Plant 12:863\u2013878. https:\/\/doi.org\/10.1016\/j.molp.2019.05.003","journal-title":"Mol Plant"},{"key":"5123_CR49","doi-asserted-by":"publisher","first-page":"789","DOI":"10.1038\/s44318-025-00671-2","volume":"45","author":"Y Li","year":"2026","unstructured":"Li Y, Fei D, Schubert J, Rutowicz K, Kaczmarska Z, Linares A, Baroux C (2026) Pre-meiotic H1.1 degradation is essential for Arabidopsis gametogenesis. EMBO J 45:789\u2013819","journal-title":"EMBO J"},{"key":"5123_CR50","doi-asserted-by":"publisher","first-page":"984","DOI":"10.1104\/pp.112.197129","volume":"159","author":"D Liang","year":"2012","unstructured":"Liang D, White RG, Waterhouse PM (2012) Gene silencing in Arabidopsis spreads from the root to the shoot, through a gating barrier, by template-dependent, nonvascular, cell-to-cell movement. Plant Physiol 159:984\u20131000. https:\/\/doi.org\/10.1104\/pp.112.197129","journal-title":"Plant Physiol"},{"key":"5123_CR51","doi-asserted-by":"publisher","DOI":"10.1002\/tpg2.20376","volume":"16","author":"Z Liang","year":"2023","unstructured":"Liang Z, Wei S, Wu Y, Guo Y, Zhang B, Yang H (2023) Temporally gene knockout using heat shock-inducible genome-editing system in plants. Plant Genome 16:e20376. https:\/\/doi.org\/10.1002\/tpg2.20376","journal-title":"Plant Genome"},{"key":"5123_CR52","doi-asserted-by":"publisher","DOI":"10.1038\/srep37711","volume":"6","author":"S Liu","year":"2016","unstructured":"Liu S, Yoder JI (2016) Chemical induction of hairpin RNAi molecules to silence vital genes in plant roots. Sci Rep 6:37711","journal-title":"Sci Rep"},{"key":"5123_CR53","doi-asserted-by":"publisher","first-page":"3705","DOI":"10.1093\/jxb\/ern220","volume":"59","author":"G Lochmanov\u00e1","year":"2008","unstructured":"Lochmanov\u00e1 G, Zdr\u00e1hal Z, Kone\u010dn\u00e1 H, Koukalov\u00e1 S, Malbeck J, Sou\u010dek P, V\u00e1lkov\u00e1 M, Kiran NS, Brzobohat\u00fd B (2008) Cytokinin-induced photomorphogenesis in dark-grown Arabidopsis: a proteomic analysis. J Exp Bot 59:3705\u20133719. https:\/\/doi.org\/10.1093\/jxb\/ern220","journal-title":"J Exp Bot"},{"key":"5123_CR54","doi-asserted-by":"publisher","first-page":"305","DOI":"10.1016\/j.devcel.2024.10.023","volume":"60","author":"X Lu","year":"2025","unstructured":"Lu X, Zhang Q, Wang Z, Cheng X, Yan H, Cai S, Zhang H, Liu Q (2025) Development of an inducible DNA barcoding system to understand lineage changes in Arabidopsis regeneration. Dev Cell 60:305\u2013319","journal-title":"Dev Cell"},{"key":"5123_CR55","doi-asserted-by":"publisher","DOI":"10.7554\/eLife.60568","volume":"9","author":"U Lupanga","year":"2020","unstructured":"Lupanga U, R\u00f6hrich R, Askani J, Hilmer S, Kiefer C, Krebs M, Kanazawa T, Ueda T, Schumacher K (2020) The Arabidopsis V-ATPase is localized to the TGN\/EE via a seed plant-specific motif. Elife 9:e60568. https:\/\/doi.org\/10.7554\/eLife.60568","journal-title":"Elife"},{"key":"5123_CR56","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-019-13074-9","volume":"10","author":"Y Ma","year":"2019","unstructured":"Ma Y, Miotk A, \u0160utikovi\u0107 Z, Ermakova O, Wenzl C, Medzihradszky A, Gaillochet C, Forner J, Utan G, Brackmann K, Galv\u00e1n-Ampudia CS, Vernoux T, Greb T, Lohmann JU (2019) WUSCHEL acts as an auxin response rheostat to maintain apical stem cells in Arabidopsis. Nat Commun 10:5093. https:\/\/doi.org\/10.1038\/s41467-019-13074-9","journal-title":"Nat Commun"},{"key":"5123_CR57","doi-asserted-by":"publisher","first-page":"945","DOI":"10.1104\/pp.20.00800","volume":"184","author":"I Mart\u00ednez-Fern\u00e1ndez","year":"2020","unstructured":"Mart\u00ednez-Fern\u00e1ndez I, Menezes de Moura S, Alves-Ferreira M, Ferr\u00e1ndiz C, Balanz\u00e0 V (2020) Identification of players controlling meristem arrest downstream of the FRUITFULL-APETALA2 pathway. Plant Physiol 184:945\u2013959","journal-title":"Plant Physiol"},{"key":"5123_CR58","doi-asserted-by":"publisher","first-page":"11973","DOI":"10.1073\/pnas.1516110113","volume":"113","author":"P Merelo","year":"2016","unstructured":"Merelo P, Ram H, Caggiano MP, Ohno C, Ott F, Straub D, Graeff M, Cho SK, Yang SW, Wenkel S, Heisler MG (2016) Regulation of MIR165\/166 by class II and class III homeodomain leucine zipper proteins establishes leaf polarity. Proc Natl Acad Sci USA 113:11973\u201311978. https:\/\/doi.org\/10.1073\/pnas.1516110113","journal-title":"Proc Natl Acad Sci USA"},{"key":"5123_CR59","doi-asserted-by":"publisher","first-page":"376","DOI":"10.1073\/pnas.95.1.376","volume":"95","author":"I Moore","year":"1998","unstructured":"Moore I, G\u00e4lweiler L, Grosskopf D, Schell J, Palme K (1998) A transcription activation system for regulated gene expression in transgenic plants. Proc Natl Acad Sci USA 95:376\u2013381","journal-title":"Proc Natl Acad Sci USA"},{"key":"5123_CR60","doi-asserted-by":"publisher","first-page":"651","DOI":"10.1111\/j.1365-313X.2006.02660.x","volume":"45","author":"I Moore","year":"2006","unstructured":"Moore I, Samalova M, Kurup S (2006) Transactivated and chemically inducible gene expression in plants. Plant J 45:651\u2013683. https:\/\/doi.org\/10.1111\/j.1365-313X.2006.02660.x","journal-title":"Plant J"},{"key":"5123_CR61","doi-asserted-by":"publisher","DOI":"10.1038\/ncomms4553","volume":"5","author":"Y Nakamura","year":"2014","unstructured":"Nakamura Y, Andr\u00e9s F, Kanehara K, Liu YC, D\u00f6rmann P, Coupland G (2014) Arabidopsis florigen FT binds to diurnally oscillating phospholipids that accelerate flowering. Nat Commun 5:3553. https:\/\/doi.org\/10.1038\/ncomms4553","journal-title":"Nat Commun"},{"key":"5123_CR62","doi-asserted-by":"publisher","DOI":"10.1002\/pld3.145","volume":"3","author":"S Nandy","year":"2019","unstructured":"Nandy S, Pathak B, Zhao S, Srivastava V (2019) Heat-shock-inducible CRISPR\/Cas9 system generates heritable mutations in rice. Plant Direct 3:e00145. https:\/\/doi.org\/10.1002\/pld3.145","journal-title":"Plant Direct"},{"key":"5123_CR63","doi-asserted-by":"publisher","first-page":"41","DOI":"10.1093\/aob\/mct092","volume":"112","author":"J Nov\u00e1k","year":"2013","unstructured":"Nov\u00e1k J, Pavl\u016f J, Nov\u00e1k O, No\u017ekov\u00e1-Hlav\u00e1\u010dkov\u00e1 V, \u0160pundov\u00e1 M, Hlavinka J, Koukalov\u00e1 \u0160, Skal\u00e1k J, \u010cern\u00fd M, Brzobohat\u00fd B (2013) High cytokinin levels induce a hypersensitive-like response in tobacco. Ann Bot 112:41\u201355. https:\/\/doi.org\/10.1093\/aob\/mct092","journal-title":"Ann Bot"},{"issue":"7","key":"5123_CR64","doi-asserted-by":"publisher","first-page":"717","DOI":"10.1038\/s41592-020-0868-y","volume":"17","author":"R Ochoa-Fernandez","year":"2020","unstructured":"Ochoa-Fernandez R, Abel NB, Wieland FG, Schlegel J, Koch LA, Miller JB, Engesser R, Giuriani G, Brandl SM, Timmer J, Weber W, Ott T, Simon R, Zurbriggen MD (2020) Optogenetic control of gene expression in plants in the presence of ambient white light. Nat Methods 17(7):717\u2013725. https:\/\/doi.org\/10.1038\/s41592-020-0868-y","journal-title":"Nat Methods"},{"key":"5123_CR65","doi-asserted-by":"publisher","first-page":"2482","DOI":"10.1105\/tpc.113.113209","volume":"25","author":"DS \u00d3'Maoil\u00e9idigh","year":"2013","unstructured":"\u00d3\u2019Maoil\u00e9idigh DS, Wuest SE, Rae L, Raganelli A, Ryan PT, Kwa\u015bniewska K, Das P, Lohan AJ, Loftus B, Graciet E, Wellmer F (2013) Control of reproductive floral organ identity specification in Arabidopsis by the C function regulator AGAMOUS. Plant Cell 25:2482\u20132503. https:\/\/doi.org\/10.1105\/tpc.113.113209","journal-title":"Plant Cell"},{"key":"5123_CR66","doi-asserted-by":"publisher","first-page":"344","DOI":"10.1111\/tpj.12878","volume":"83","author":"DS \u00d3'Maoil\u00e9idigh","year":"2015","unstructured":"\u00d3\u2019Maoil\u00e9idigh DS, Thomson B, Raganelli A, Wuest SE, Ryan PT, Kwa\u015bniewska K, Carles CC, Graciet E, Wellmer F (2015) Gene network analysis of Arabidopsis thaliana flower development through dynamic gene perturbations. Plant J 83:344\u2013358. https:\/\/doi.org\/10.1111\/tpj.12878","journal-title":"Plant J"},{"key":"5123_CR67","doi-asserted-by":"publisher","DOI":"10.3390\/ijms23031737","volume":"23","author":"ES Omelina","year":"2022","unstructured":"Omelina ES, Yushkova AA, Motorina DM, Volegov GA, Kozhevnikova EN, Pindyurin AV (2022) Optogenetic and chemical induction systems for regulation of transgene expression in plants: use in basic and applied research. Int J Mol Sci 23:1737","journal-title":"Int J Mol Sci"},{"key":"5123_CR68","doi-asserted-by":"publisher","first-page":"388","DOI":"10.1093\/mp\/ssn007","volume":"1","author":"V Ongaro","year":"2008","unstructured":"Ongaro V, Bainbridge K, Williamson L, Leyser O (2008) Interactions between axillary branches of Arabidopsis. Mol Plant 1:388\u2013400","journal-title":"Mol Plant"},{"key":"5123_CR69","doi-asserted-by":"publisher","first-page":"405","DOI":"10.1093\/jxb\/erp315","volume":"61","author":"A Osterrieder","year":"2010","unstructured":"Osterrieder A, Hummel E, Carvalho CM, Hawes C (2010) Golgi membrane dynamics after induction of a dominant-negative mutant Sar1 GTPase in tobacco. J Exp Bot 61:405\u2013422. https:\/\/doi.org\/10.1093\/jxb\/erp315","journal-title":"J Exp Bot"},{"issue":"1","key":"5123_CR70","doi-asserted-by":"publisher","first-page":"684","DOI":"10.1038\/s41467-025-67339-7","volume":"17","author":"S Park","year":"2026","unstructured":"Park S, Cho HS, Lee S, Lim H, Park C, Choi S, Jun SE, Lee Y, Kim GT, Hwang I (2026) JULGI coordinates vascular development and leaf patterning through non-cell-autonomous regulation of miR165\/166. Nat Commun 17(1):684","journal-title":"Nat Commun"},{"key":"5123_CR71","doi-asserted-by":"publisher","first-page":"576","DOI":"10.1016\/j.devcel.2015.04.024","volume":"33","author":"L Pi","year":"2015","unstructured":"Pi L, Aichinger E, van der Graaff E, Llavata-Peris CI, Weijers D, Hennig L, Laux T (2015) Organizer-derived WOX5 signal maintains root columella stem cells through chromatin-mediated repression of CDF4 expression. Dev Cell 33:576\u2013588","journal-title":"Dev Cell"},{"key":"5123_CR72","doi-asserted-by":"publisher","first-page":"385","DOI":"10.1016\/S0076-6879(00)27291-1","volume":"327","author":"D Picard","year":"2000","unstructured":"Picard D (2000) Posttranslational regulation of proteins by fusions to steroid-binding domains. Methods Enzymol 327:385\u2013401","journal-title":"Methods Enzymol"},{"key":"5123_CR73","doi-asserted-by":"publisher","first-page":"655","DOI":"10.3389\/fpls.2018.00655","volume":"9","author":"S Prerostova","year":"2018","unstructured":"Prerostova S, Dobrev PI, Gaudinova A, Knirsch V, K\u00f6rber N, Pieruschka R, Vankova R (2018) Cytokinins: their impact on molecular and growth responses to drought stress and recovery in Arabidopsis. Front Plant Sci 9:655","journal-title":"Front Plant Sci"},{"key":"5123_CR74","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1008661","volume":"16","author":"H Ram","year":"2020","unstructured":"Ram H, Sahadevan S, Gale N, Caggiano MP, Yu X, Ohno C, Heisler MG (2020) An integrated analysis of cell-type specific gene expression reveals genes regulated by REVOLUTA and KANADI1 in the Arabidopsis shoot apical meristem. PLoS Genet 16:e1008661. https:\/\/doi.org\/10.1371\/journal.pgen.1008661","journal-title":"PLoS Genet"},{"key":"5123_CR75","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-020-80903-z","volume":"11","author":"RS Randall","year":"2021","unstructured":"Randall RS (2021) The plant AlcR-pAlcA ethanol-inducible system displays gross growth artefacts independently of downstream pAlcA-regulated inducible constructs. Sci Rep 11:2142","journal-title":"Sci Rep"},{"key":"5123_CR76","doi-asserted-by":"publisher","first-page":"663","DOI":"10.1126\/science.1116261","volume":"310","author":"GV Reddy","year":"2005","unstructured":"Reddy GV, Meyerowitz EM (2005) Stem-cell homeostasis and growth dynamics can be uncoupled in the Arabidopsis shoot apex. Science 310:663\u2013667","journal-title":"Science"},{"key":"5123_CR77","doi-asserted-by":"publisher","first-page":"3228","DOI":"10.1105\/tpc.113.111518","volume":"25","author":"BJ Reinhart","year":"2013","unstructured":"Reinhart BJ, Liu T, Newell NR, Magnani E, Huang T, Kerstetter R, Michaels S, Barton MK (2013) Establishing a framework for the ad\/abaxial regulatory network of Arabidopsis: ascertaining targets of class III homeodomain leucine zipper and KANADI regulation. Plant Cell 25:3228\u20133249. https:\/\/doi.org\/10.1105\/tpc.113.111518","journal-title":"Plant Cell"},{"key":"5123_CR78","unstructured":"Ren C, Liu Y, Wang X, Guo Y, Fan P, Li S, Liang Z (2020) Targeted genome editing in Nicotiana tabacum using inducible CRISPR\/Cas9 system. bioRxiv 2020\u201303"},{"key":"5123_CR79","doi-asserted-by":"publisher","first-page":"1259","DOI":"10.1104\/pp.105.059659","volume":"138","author":"GR Roberts","year":"2005","unstructured":"Roberts GR, Garoosi GA, Koroleva O, Ito M, Laufs P, Leader DJ, Caddick MX, Doonan JH, Tomsett AB (2005) The alc-GR system: a modified alc gene switch designed for use in plant tissue culture. Plant Physiol 138:1259\u20131267. https:\/\/doi.org\/10.1104\/pp.105.059659","journal-title":"Plant Physiol"},{"key":"5123_CR80","doi-asserted-by":"publisher","DOI":"10.1093\/plcell\/koaf119","volume":"37","author":"AHK Roeder","year":"2025","unstructured":"Roeder AHK, Argueso CT, Williams M, Auge G, Li X, Strader L, Uauy C, Wu S (2025) Focus on translational research from Arabidopsis to crop plants and beyond. Plant Cell 37:koaf119. https:\/\/doi.org\/10.1093\/plcell\/koaf119","journal-title":"Plant Cell"},{"key":"5123_CR81","doi-asserted-by":"publisher","first-page":"239","DOI":"10.1038\/s42003-020-0969-2","volume":"3","author":"MVG Roldan","year":"2020","unstructured":"Roldan MVG, Izhaq F, Verdenaud M, Eleblu J, Haraghi A, Sommard V, Chambrier P, Latrasse D, J\u00e9gu T, Benhamed M, Sz\u00e9csi J, Bendahmane M, Boualem A, Bendahmane A (2020) Integrative genome-wide analysis reveals the role of WIP proteins in inhibition of growth and development. Commun Biol 3:239. https:\/\/doi.org\/10.1038\/s42003-020-0969-2","journal-title":"Commun Biol"},{"key":"5123_CR82","doi-asserted-by":"publisher","first-page":"47","DOI":"10.1016\/j.scienta.2014.02.041","volume":"172","author":"P Rossignol","year":"2014","unstructured":"Rossignol P, Orbovi\u0107 V, Irish VF (2014) A dexamethasone-inducible gene expression system is active in Citrus plants. Sci Hortic 172:47\u201353","journal-title":"Sci Hortic"},{"key":"5123_CR83","doi-asserted-by":"publisher","first-page":"769","DOI":"10.1111\/j.1365-313X.2005.02486.x","volume":"43","author":"S Rutherford","year":"2005","unstructured":"Rutherford S, Brandizzi F, Townley H, Craft J, Wang Y, Jepson I, Martinez A, Moore I (2005) Improved transcriptional activators and their use in mis-expression traps in Arabidopsis. Plant J 43:769\u2013788. https:\/\/doi.org\/10.1111\/j.1365-313X.2005.02486.x","journal-title":"Plant J"},{"key":"5123_CR84","doi-asserted-by":"publisher","first-page":"245","DOI":"10.1007\/s44372-025-00334-w","volume":"2","author":"D Rynjah","year":"2025","unstructured":"Rynjah D, Sandhanam K, Bhattacharjee B, Deka B, Newar A, Kalita T, Das T (2025) CRISPR\/Cas9 gene editing systems for enhancing secondary metabolite biosynthesis via reproductive tissue modification. Discov Plants 2:245","journal-title":"Discov Plants"},{"key":"5123_CR85","doi-asserted-by":"publisher","DOI":"10.1186\/s12870-021-03241-w","volume":"21","author":"M Samalova","year":"2021","unstructured":"Samalova M, Moore I (2021) The steroid-inducible pOp6\/LhGR gene expression system is fast, sensitive and does not cause plant growth defects in rice (Oryza sativa). BMC Plant Biol 21:461. https:\/\/doi.org\/10.1186\/s12870-021-03241-w","journal-title":"BMC Plant Biol"},{"key":"5123_CR86","doi-asserted-by":"publisher","first-page":"919","DOI":"10.1111\/j.1365-313X.2005.02341.x","volume":"41","author":"M Samalova","year":"2005","unstructured":"Samalova M, Brzobohaty B, Moore I (2005) pOp6\/LhGR: a stringently regulated and highly responsive dexamethasone-inducible gene expression system for tobacco. Plant J 41:919\u2013935. https:\/\/doi.org\/10.1111\/j.1365-313X.2005.02341.x","journal-title":"Plant J"},{"issue":"2","key":"5123_CR87","doi-asserted-by":"publisher","DOI":"10.1002\/cppb.20089","volume":"4","author":"M Samalova","year":"2019","unstructured":"Samalova M, Kirchhelle C, Moore I (2019) Universal methods for transgene induction using the dexamethasone-inducible transcription activation system pOp6\/LhGR in Arabidopsis and other plant species. Curr Protoc Plant Biol 4(2):e20089. https:\/\/doi.org\/10.1002\/cppb.20089","journal-title":"Curr Protoc Plant Biol"},{"key":"5123_CR88","doi-asserted-by":"publisher","first-page":"209","DOI":"10.1093\/plphys\/kiad228","volume":"194","author":"M Samalova","year":"2024","unstructured":"Samalova M, Melnikava A, Elsayad K, Peaucelle A, Gahurova E, Gumulec J, Hejatko J (2024) Hormone-regulated expansins: expression, localization, and cell wall biomechanics in Arabidopsis root growth. Plant Physiol 194:209\u2013228","journal-title":"Plant Physiol"},{"key":"5123_CR89","doi-asserted-by":"publisher","first-page":"2743","DOI":"10.1093\/plphys\/kiae234","volume":"195","author":"V S\u00e1nchez-Gerschon","year":"2024","unstructured":"S\u00e1nchez-Gerschon V, Mart\u00ednez-Fern\u00e1ndez I, Gonz\u00e1lez-Berm\u00fadez MR, de la Hoz-Rodr\u00edguez S, Gonz\u00e1lez FV, Lozano-Juste J, Ferr\u00e1ndiz C, Balanz\u00e0 V (2024) Transcription factors HB21\/40\/53 trigger inflorescence arrest through abscisic acid accumulation at the end of flowering. Plant Physiol 195:2743\u20132756. https:\/\/doi.org\/10.1093\/plphys\/kiae234","journal-title":"Plant Physiol"},{"key":"5123_CR90","doi-asserted-by":"publisher","first-page":"506","DOI":"10.1111\/tpj.12301","volume":"76","author":"M Sch\u00e4fer","year":"2013","unstructured":"Sch\u00e4fer M, Br\u00fctting C, Gase K, Reichelt M, Baldwin I, Meldau S (2013) \u2018Real time\u2019 genetic manipulation: a new tool for ecological field studies. Plant J 76:506\u2013518. https:\/\/doi.org\/10.1111\/tpj.12301","journal-title":"Plant J"},{"key":"5123_CR91","doi-asserted-by":"publisher","first-page":"10421","DOI":"10.1073\/pnas.88.23.10421","volume":"88","author":"M Schena","year":"1991","unstructured":"Schena M, Lloyd AM, Davis RW (1991) A steroid-inducible gene expression system for plant cells. Proc Natl Acad Sci U S A 88:10421\u201310425. https:\/\/doi.org\/10.1073\/pnas.88.23.10421","journal-title":"Proc Natl Acad Sci U S A"},{"key":"5123_CR92","doi-asserted-by":"publisher","first-page":"41","DOI":"10.1186\/s13007-022-00879-x","volume":"18","author":"J Schubert","year":"2022","unstructured":"Schubert J, Li Y, Mendes MA, Fei D, Dickinson H, Moore I, Baroux C (2022) A procedure for Dex-induced gene transactivation in Arabidopsis ovules. Plant Methods 18:41. https:\/\/doi.org\/10.1186\/s13007-022-00879-x","journal-title":"Plant Methods"},{"key":"5123_CR93","doi-asserted-by":"publisher","first-page":"40","DOI":"10.1104\/pp.18.00463","volume":"178","author":"AK Sch\u00fcrholz","year":"2018","unstructured":"Sch\u00fcrholz AK, L\u00f3pez-Salmer\u00f3n V, Li Z, Forner J, Wenzl C, Gaillochet C, Augustin S, Barro AV, Fuchs M, Gebert M, Lohmann JU, Greb T, Wolf S (2018) A comprehensive toolkit for inducible, cell type-specific gene expression in Arabidopsis. Plant Physiol 178:40\u201353. https:\/\/doi.org\/10.1104\/pp.18.00463","journal-title":"Plant Physiol"},{"key":"5123_CR94","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1111\/j.1365-313X.2009.03845.x","volume":"59","author":"J Sebastian","year":"2009","unstructured":"Sebastian J, Ravi M, Andreuzza S, Panoli AP, Marimuthu MP, Siddiqi I (2009) The plant adherin AtSCC2 is required for embryogenesis and sister-chromatid cohesion during meiosis in Arabidopsis. Plant J 59:1\u201313. https:\/\/doi.org\/10.1111\/j.1365-313X.2009.03845.x","journal-title":"Plant J"},{"key":"5123_CR95","doi-asserted-by":"publisher","first-page":"8350","DOI":"10.3390\/molecules19068350","volume":"19","author":"R Sekeli","year":"2014","unstructured":"Sekeli R, Abdullah JO, Namasivayam P, Muda P, Abu Bakar UK, Yeong WC, Pillai V (2014) RNA interference of 1-aminocyclopropane-1-carboxylic acid oxidase (ACO1 and ACO2) gene expression prolongs the shelf life of Eksotika (Carica papaya L.) papaya fruit. Mol 19:8350\u20138362. https:\/\/doi.org\/10.3390\/molecules19068350","journal-title":"Mol"},{"key":"5123_CR96","doi-asserted-by":"publisher","first-page":"1737","DOI":"10.1038\/s41477-024-01810-z","volume":"10","author":"M Sharma","year":"2024","unstructured":"Sharma M, Friedrich T, Oluoch P, Zhang N, Peruzzo F, Jha V, Pi L, Groot EP, Kornet N, Follo M, Aichinger E, Fleck C, Laux T (2024) A coherent feed-forward loop in the Arabidopsis root stem cell organizer regulates auxin biosynthesis and columella stem cell maintenance. Nat Plants 10:1737\u20131748. https:\/\/doi.org\/10.1038\/s41477-024-01810-z","journal-title":"Nat Plants"},{"key":"5123_CR97","doi-asserted-by":"publisher","first-page":"2214","DOI":"10.1073\/pnas.0711453105","volume":"105","author":"CC Sheldon","year":"2008","unstructured":"Sheldon CC, Hills MJ, Lister C, Dean C, Dennis ES, Peacock WJ (2008) Resetting of FLOWERING LOCUS C expression after epigenetic repression by vernalization. Proc Natl Acad Sci U S A 105:2214\u20132219. https:\/\/doi.org\/10.1073\/pnas.0711453105","journal-title":"Proc Natl Acad Sci U S A"},{"key":"5123_CR98","doi-asserted-by":"publisher","DOI":"10.1242\/dev.171355","volume":"146","author":"D Shi","year":"2019","unstructured":"Shi D, Lebovka I, L\u00f3pez-Salmer\u00f3n V, Sanchez P, Greb T (2019) Bifacial cambium stem cells generate xylem and phloem during radial plant growth. Development 146:dev171355. https:\/\/doi.org\/10.1242\/dev.171355","journal-title":"Development"},{"key":"5123_CR99","doi-asserted-by":"publisher","first-page":"595","DOI":"10.1111\/tpj.15796","volume":"111","author":"S Shimada","year":"2022","unstructured":"Shimada S, Yanagawa Y, Munesada T, Horii Y, Kuriyama T, Kawashima M, Kondou Y, Yoshizumi T, Mitsuda N, Ohme-Takagi M, Makita Y, Matsui M (2022) A collection of inducible transcription factor-glucocorticoid receptor fusion lines for functional analyses in Arabidopsis thaliana. Plant J 111:595\u2013607. https:\/\/doi.org\/10.1111\/tpj.15796","journal-title":"Plant J"},{"key":"5123_CR100","doi-asserted-by":"publisher","first-page":"117","DOI":"10.1186\/1471-2229-13-117","volume":"13","author":"DK Singh","year":"2013","unstructured":"Singh DK, Andreuzza S, Panoli AP, Siddiqi I (2013) AtCTF7 is required for establishment of sister chromatid cohesion and association of cohesin with chromatin during meiosis in Arabidopsis. BMC Plant Biol 13:117. https:\/\/doi.org\/10.1186\/1471-2229-13-117","journal-title":"BMC Plant Biol"},{"key":"5123_CR101","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-023-49093-2","volume":"13","author":"S Sinha","year":"2023","unstructured":"Sinha S, Sahadevan S, Ohno C, Ram H, Heisler MG (2023) Global gene regulatory network underlying miR165a in Arabidopsis shoot apical meristem. Sci Rep 13:22258. https:\/\/doi.org\/10.1038\/s41598-023-49093-2","journal-title":"Sci Rep"},{"key":"5123_CR102","doi-asserted-by":"publisher","first-page":"2861","DOI":"10.1093\/jxb\/erw129","volume":"67","author":"J Skal\u00e1k","year":"2016","unstructured":"Skal\u00e1k J, \u010cern\u00fd M, Jedelsk\u00fd P, Dobr\u00e1 J, Ge E, Nov\u00e1k J, Hronkov\u00e1 M, Dobrev P, Vankov\u00e1 R, Brzobohat\u00fd B (2016) Stimulation of ipt overexpression as a tool to elucidate the role of cytokinins in high temperature responses of Arabidopsis thaliana. J Exp Bot 67:2861\u20132873. https:\/\/doi.org\/10.1093\/jxb\/erw129","journal-title":"J Exp Bot"},{"key":"5123_CR103","doi-asserted-by":"publisher","DOI":"10.1126\/science.aag1550","volume":"354","author":"L Song","year":"2016","unstructured":"Song L, Huang SSC, Wise A, Castanon R, Nery JR, Chen H, Ecker JR (2016) A transcription factor hierarchy defines an environmental stress response network. Science 354:aag1550","journal-title":"Science"},{"key":"5123_CR104","doi-asserted-by":"publisher","first-page":"3797","DOI":"10.1093\/jxb\/erm236","volume":"58","author":"P Sou\u010dek","year":"2007","unstructured":"Sou\u010dek P, Kl\u00edma P, Rekov\u00e1 A, Brzobohat\u00fd B (2007) Involvement of hormones and KNOXI genes in early Arabidopsis seedling development. J Exp Bot 58:3797\u20133810. https:\/\/doi.org\/10.1093\/jxb\/erm236","journal-title":"J Exp Bot"},{"key":"5123_CR105","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0205117","volume":"13","author":"SS Sugano","year":"2018","unstructured":"Sugano SS, Nishihama R, Shirakawa M, Takagi J, Matsuda Y, Ishida S, Shimada T, Hara-Nishimura I, Osakabe K, Kohchi T (2018) Efficient CRISPR\/Cas9-based genome editing and its application to conditional genetic analysis in Marchantia polymorpha. PLoS ONE 13:e0205117. https:\/\/doi.org\/10.1371\/journal.pone.0205117","journal-title":"PLoS ONE"},{"key":"5123_CR106","doi-asserted-by":"publisher","first-page":"563","DOI":"10.3390\/genes9110563","volume":"9","author":"A Szczepaniak","year":"2018","unstructured":"Szczepaniak A, Ksi\u0105\u017ckiewicz M, Podkowi\u0144ski J, Czy\u017c KB, Figlerowicz M, Naganowska B (2018) Legume cytosolic and plastid acetyl-CoA carboxylase genes differ by evolutionary patterns and selection pressure schemes acting before and after whole-genome duplications. Genes 9:563. https:\/\/doi.org\/10.3390\/genes9110563","journal-title":"Genes"},{"key":"5123_CR107","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1010344","volume":"19","author":"L Tadini","year":"2023","unstructured":"Tadini L, Jeran N, Domingo G, Zambelli F, Masiero S, Calabritto A, Costantini E, Forlani S, Marsoni M, Briani F, Vannini C, Pesaresi P (2023) Perturbation of protein homeostasis brings plastids at the crossroad between repair and dismantling. PLoS Genet 19:e1010344. https:\/\/doi.org\/10.1371\/journal.pgen.1010344","journal-title":"PLoS Genet"},{"key":"5123_CR108","doi-asserted-by":"publisher","first-page":"1097","DOI":"10.1093\/aob\/mcae153","volume":"134","author":"C Tamadaddi","year":"2024","unstructured":"Tamadaddi C, Choi J, Ghasemi M, Kim SH, Gomez ED, Gomez EW, Anderson CT (2024) NST3 induces ectopic transdifferentiation, forming secondary walls with diverse patterns and composition in Arabidopsis thaliana. Ann Bot 134:1097\u20131111. https:\/\/doi.org\/10.1093\/aob\/mcae153","journal-title":"Ann Bot"},{"key":"5123_CR109","doi-asserted-by":"publisher","first-page":"1088","DOI":"10.1016\/j.molp.2016.05.001","volume":"9","author":"X Tang","year":"2016","unstructured":"Tang X, Zheng X, Qi Y, Zhang D, Cheng Y, Tang A, Zhang Y (2016) A single transcript CRISPR-Cas9 system for efficient genome editing in plants. Mol Plant 9:1088\u20131091","journal-title":"Mol Plant"},{"key":"5123_CR110","doi-asserted-by":"publisher","first-page":"124","DOI":"10.1038\/nature24300","volume":"551","author":"Z Tao","year":"2017","unstructured":"Tao Z, Shen L, Gu X, Wang Y, Yu H, He Y (2017) Embryonic epigenetic reprogramming by a pioneer transcription factor in plants. Nature 551:124\u2013128. https:\/\/doi.org\/10.1038\/nature24300","journal-title":"Nature"},{"key":"5123_CR111","doi-asserted-by":"publisher","DOI":"10.1242\/dev.202870","volume":"151","author":"M Uzair","year":"2024","unstructured":"Uzair M, Urquidi Camacho RA, Liu Z, Overholt AM, DeGennaro D, Zhang L, Herron BS, Hong T, Shpak ED (2024) An updated model of shoot apical meristem regulation by ERECTA family and CLAVATA3 signaling pathways in Arabidopsis. Development 151:dev202870. https:\/\/doi.org\/10.1242\/dev.202870","journal-title":"Development"},{"key":"5123_CR112","doi-asserted-by":"publisher","DOI":"10.1186\/s12870-019-2038-x","volume":"19","author":"D Vlad","year":"2019","unstructured":"Vlad D, Abu-Jamous B, Wang P, Langdale JA (2019) A modular steroid-inducible gene expression system for use in rice. BMC Plant Biol 19:426. https:\/\/doi.org\/10.1186\/s12870-019-2038-x","journal-title":"BMC Plant Biol"},{"key":"5123_CR113","doi-asserted-by":"publisher","first-page":"766","DOI":"10.1038\/s41477-020-0695-2","volume":"6","author":"X Wang","year":"2020","unstructured":"Wang X, Ye L, Lyu M, Ursache R, L\u00f6ytynoja A, M\u00e4h\u00f6nen AP (2020) An inducible genome editing system for plants. Nat Plants 6:766\u2013772. https:\/\/doi.org\/10.1038\/s41477-020-0695-2","journal-title":"Nat Plants"},{"key":"5123_CR114","doi-asserted-by":"publisher","first-page":"1109","DOI":"10.1105\/tpc.108.065250","volume":"21","author":"MT Waters","year":"2009","unstructured":"Waters MT, Wang P, Korkaric M, Capper RG, Saunders NJ, Langdale JA (2009) GLK transcription factors coordinate expression of the photosynthetic apparatus in Arabidopsis. Plant Cell 21:1109\u20131128. https:\/\/doi.org\/10.1105\/tpc.108.065250","journal-title":"Plant Cell"},{"key":"5123_CR115","doi-asserted-by":"publisher","first-page":"583","DOI":"10.1111\/j.1467-7652.2005.00149.x","volume":"3","author":"A Wielopolska","year":"2005","unstructured":"Wielopolska A, Townley H, Moore I, Waterhouse P, Helliwell C (2005) A high-throughput inducible RNAi vector for plants. Plant Biotechnol J 3:583\u2013590. https:\/\/doi.org\/10.1111\/j.1467-7652.2005.00149.x","journal-title":"Plant Biotechnol J"},{"key":"5123_CR116","doi-asserted-by":"publisher","first-page":"1240","DOI":"10.1104\/pp.15.00764","volume":"169","author":"Y Xie","year":"2015","unstructured":"Xie Y, Straub D, Eguen T, Brandt R, Stahl M, Mart\u00ednez-Garc\u00eda JF, Wenkel S (2015) Meta-analysis of Arabidopsis KANADI1 direct target genes identifies a basic growth-promoting module acting upstream of hormonal signaling pathways. Plant Physiol 169:1240\u20131253. https:\/\/doi.org\/10.1104\/pp.15.00764","journal-title":"Plant Physiol"},{"key":"5123_CR117","doi-asserted-by":"publisher","first-page":"418","DOI":"10.1186\/s13059-025-03884-0","volume":"26","author":"X Xu","year":"2025","unstructured":"Xu X, Neumann M, Carew F, Chen P, Braeuning C, Zubieta C, Muino JM, Smaczniak C, Kaufmann K (2025) AP1 is a pioneer transcription factor that programmes cell fate through MADS-domain protein tetramerisation. Genome Biol 26:418. https:\/\/doi.org\/10.1186\/s13059-025-03884-0","journal-title":"Genome Biol"},{"key":"5123_CR118","doi-asserted-by":"publisher","first-page":"2025","DOI":"10.1101\/gad.17258511","volume":"25","author":"RK Yadav","year":"2011","unstructured":"Yadav RK, Perales M, Gruel J, Girke T, J\u00f6nsson H, Reddy GV (2011) WUSCHEL protein movement mediates stem cell homeostasis in the Arabidopsis shoot apex. Genes Dev 25:2025\u20132030. https:\/\/doi.org\/10.1101\/gad.17258511","journal-title":"Genes Dev"},{"issue":"3","key":"5123_CR119","doi-asserted-by":"publisher","first-page":"906","DOI":"10.1104\/pp.110.154013","volume":"153","author":"M Yamaguchi","year":"2010","unstructured":"Yamaguchi M, Gou\u00e9 N, Igarashi H, Ohtani M, Nakano Y, Mortimer JC, Nishikubo N, Kubo M, Katayama Y, Kakegawa K, Dupree P, Demura T (2010) VASCULAR-RELATED NAC-DOMAIN6 and VASCULAR-RELATED NAC-DOMAIN7 effectively induce transdifferentiation into xylem vessel elements under control of an induction system. Plant Physiol 153(3):906\u2013914. https:\/\/doi.org\/10.1104\/pp.110.154013","journal-title":"Plant Physiol"},{"key":"5123_CR120","doi-asserted-by":"publisher","first-page":"123","DOI":"10.1007\/978-1-4939-2444-8_6","volume":"1284","author":"N Yamaguchi","year":"2015","unstructured":"Yamaguchi N, Winter CM, Wellmer F, Wagner D (2015) Identification of direct targets of plant transcription factors using the GR fusion technique. Methods Mol Biol 1284:123\u2013138. https:\/\/doi.org\/10.1007\/978-1-4939-2444-8_6","journal-title":"Methods Mol Biol"},{"key":"5123_CR121","doi-asserted-by":"publisher","DOI":"10.3390\/ijms26157265","volume":"26","author":"MU Yasin","year":"2025","unstructured":"Yasin MU, Sun L, Yang C, Liu B, Gan Y (2025) C2H2 zinc finger proteins GIS2 and ZFP8 regulate trichome development via hormone signaling in Arabidopsis. Int J Mol Sci 26:7265. https:\/\/doi.org\/10.3390\/ijms26157265","journal-title":"Int J Mol Sci"},{"key":"5123_CR122","doi-asserted-by":"publisher","first-page":"13","DOI":"10.1007\/978-1-0716-3354-0_2","volume":"2698","author":"T Zerin","year":"2023","unstructured":"Zerin T, Greb T, Wolf S (2023) Inducible, tissue-specific gene expression in Arabidopsis using GR-LhG4-mediated trans-activation. Methods Mol Biol 2698:13\u201325. https:\/\/doi.org\/10.1007\/978-1-0716-3354-0_2","journal-title":"Methods Mol Biol"},{"key":"5123_CR123","doi-asserted-by":"publisher","first-page":"445","DOI":"10.1007\/s11103-018-0709-x","volume":"96","author":"Q Zhang","year":"2018","unstructured":"Zhang Q, Xing HL, Wang ZP, Zhang HY, Yang F, Wang XC, Chen QJ (2018) Potential high-frequency off-target mutagenesis induced by CRISPR\/Cas9 in Arabidopsis and its prevention. Plant Mol Biol 96:445\u2013456. https:\/\/doi.org\/10.1007\/s11103-018-0709-x","journal-title":"Plant Mol Biol"},{"key":"5123_CR124","doi-asserted-by":"publisher","DOI":"10.1016\/j.xplc.2024.100823","volume":"5","author":"C Zhang","year":"2024","unstructured":"Zhang C, Tang Y, Tang S, Chen L, Li T, Yuan H, Xu Y, Zhou Y, Zhang S, Wang J, Wen H, Jiang W, Pang Y, Deng X, Cao X, Zhou J, Song X, Liu Q (2024) An inducible CRISPR activation tool for accelerating plant regeneration. Plant Commun 5:100823. https:\/\/doi.org\/10.1016\/j.xplc.2024.100823","journal-title":"Plant Commun"},{"key":"5123_CR125","doi-asserted-by":"publisher","first-page":"661","DOI":"10.1038\/s41580-020-00288-9","volume":"21","author":"H Zhu","year":"2020","unstructured":"Zhu H, Li C, Gao C (2020) Applications of CRISPR\u2013Cas in agriculture and plant biotechnology. Nat Rev Mol Cell Biol 21:661\u2013677","journal-title":"Nat Rev Mol Cell Biol"},{"key":"5123_CR126","doi-asserted-by":"publisher","first-page":"265","DOI":"10.1046\/j.1365-313x.2000.00868.x","volume":"24","author":"J Zuo","year":"2000","unstructured":"Zuo J, Niu QW, Chua NH (2000) An estrogen receptor-based transactivator XVE mediates highly inducible gene expression in transgenic plants. Plant J 24:265\u2013273","journal-title":"Plant J"}],"container-title":["Planta"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00425-026-05123-7.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s00425-026-05123-7","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00425-026-05123-7.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,9,21]],"date-time":"2026-09-21T07:04:40Z","timestamp":1789974280000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s00425-026-05123-7"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,8,17]]},"references-count":125,"journal-issue":{"issue":"4","published-print":{"date-parts":[[2026,10]]}},"alternative-id":["5123"],"URL":"https:\/\/doi.org\/10.1007\/s00425-026-05123-7","relation":{},"ISSN":["0032-0935","1432-2048"],"issn-type":[{"value":"0032-0935","type":"print"},{"value":"1432-2048","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,8,17]]},"assertion":[{"value":"20 April 2026","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"2 August 2026","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"17 August 2026","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"Authors declare no conflict of interest.","order":1,"name":"Ethics","label":"Conflict of interest","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"This is a review article and so it did not require any ethical approvals to be obtained.","order":2,"name":"Ethics","label":"Ethical approval","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"Not applicable.","order":3,"name":"Ethics","label":"Permission to reproduce material from other sources","group":{"name":"EthicsHeading","label":"Declarations"}}],"article-number":"99"}}