{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,17]],"date-time":"2026-07-17T16:31:33Z","timestamp":1784305893460,"version":"3.55.0"},"reference-count":127,"publisher":"Springer Science and Business Media LLC","issue":"5","license":[{"start":{"date-parts":[[2023,3,18]],"date-time":"2023-03-18T00:00:00Z","timestamp":1679097600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2023,3,18]],"date-time":"2023-03-18T00:00:00Z","timestamp":1679097600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Parasitol Res"],"published-print":{"date-parts":[[2023,5]]},"DOI":"10.1007\/s00436-023-07811-9","type":"journal-article","created":{"date-parts":[[2023,3,25]],"date-time":"2023-03-25T16:55:46Z","timestamp":1679763346000},"page":"1107-1126","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":7,"title":["Update on the genetic diversity and population structure of Echinococcus granulosus in Gansu Province, Tibet Autonomous Region, and Xinjiang Uygur Autonomous Region, Western China, inferred from mitochondrial cox1, nad1, and nad5 sequences"],"prefix":"10.1007","volume":"122","author":[{"given":"Nigus Abebe","family":"Shumuye","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Li","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"John Asekhaen","family":"Ohiolei","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sayed Ajmal","family":"Qurishi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Wen-Hui","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Nian-Zhang","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yan-Tao","family":"Wu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yao-Dong","family":"Wu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sheng-Zhi","family":"Gao","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fu-Heng","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xue-Qi","family":"Tian","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Wen-Jun","family":"Tian","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yong","family":"Fu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xie-Zhong","family":"Wang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yong-Hong","family":"Pan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fang","family":"Zhan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lin-Sheng","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ming-Kuan","family":"Guo","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Wen-Dong","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bao-Quan","family":"Fu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hong-Bin","family":"Yan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Wan-Zhong","family":"Jia","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2023,3,18]]},"reference":[{"key":"7811_CR1","doi-asserted-by":"publisher","first-page":"923","DOI":"10.1016\/j.ijpara.2017.06.003","volume":"47","author":"F Addy","year":"2017","unstructured":"Addy F, Wassermann M, Kagendo D, Ebi D, Zeyhle E, Elmahdi IE, Umhang G, Casulli A, Harandi MF, Aschenborn O, Kern P, Mackenstedt U, Romig T (2017) Genetic differentiation of the G6\/7 cluster of Echinococcus canadensis based on mitochondrial marker genes. Int J Parasitol 47:923\u2013931. https:\/\/doi.org\/10.1016\/j.ijpara.2017.06.003","journal-title":"Int J Parasitol"},{"key":"7811_CR2","first-page":"450","volume":"28","author":"NA Ahmadi","year":"2011","unstructured":"Ahmadi NA, Badi F (2011) Human hydatidosis in Tehran, Iran: a retrospective epidemiological study of surgical cases between 1999 and 2009 at two university medical centers. Trop Biomed 28:450\u2013456","journal-title":"Trop Biomed"},{"issue":"1","key":"7811_CR3","doi-asserted-by":"publisher","first-page":"347","DOI":"10.1186\/s13071-020-04199-8","volume":"13","author":"MA Alvi","year":"2020","unstructured":"Alvi MA, Ohiolei JA, Saqib M, Li L, Tayyab MH, Alvi AA, Wu YT, Fu BQ, Yan HB, Jia WZ (2020) Echinococcus granulosus (sensu stricto) (G1, G3) and E. ortleppi (G5) in Pakistan: phylogeny, genetic diversity and population structural analysis based on mitochondrial DNA. Parasit Vectors 13(1):347","journal-title":"Parasit Vectors"},{"key":"7811_CR4","doi-asserted-by":"publisher","first-page":"447","DOI":"10.2307\/j.ctv1nzfgj7","volume-title":"Phylogeography: the history and formation of species","author":"JC Avise","year":"2000","unstructured":"Avise JC (2000) Phylogeography: the history and formation of species. Harvard University Press, Cambridge, p 447"},{"key":"7811_CR5","first-page":"73","volume":"61","author":"TJ Bai","year":"2011","unstructured":"Bai TJ, Yang WD, Bai TX, Ma YS (2011) Investigation and control measures of hydatid infection in sheep in Tianzhu County. Anim Husb Vet Med 61:73\u201375 (In Chinese)","journal-title":"Anim Husb Vet Med"},{"issue":"1","key":"7811_CR6","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1093\/oxfordjournals.molbev.a026036","volume":"16","author":"H Bandelt","year":"1999","unstructured":"Bandelt H, Forster P, R\u00f6hl A (1999) Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16(1):37\u201348","journal-title":"Mol Biol Evol"},{"key":"7811_CR7","doi-asserted-by":"publisher","first-page":"231","DOI":"10.14202\/vetworld.2018.231-234","volume":"11","author":"A Barazesh","year":"2018","unstructured":"Barazesh A, Sarkari B, Ebrahimi S, Hami M (2018) DNA extraction from hydatid cyst protoscolices: comparison of five different methods. Vet World 11:231","journal-title":"Vet World"},{"key":"7811_CR8","doi-asserted-by":"publisher","first-page":"102120","DOI":"10.1016\/j.parint.2020.102120","volume":"77","author":"P Bonelli","year":"2020","unstructured":"Bonelli P, Dei Giudici S, Peruzzu A, Piseddu T, Santucciu C, Masu G, Mastrandrea S, Delogu ML, Masala G (2020) Genetic diversity of Echinococcus granulosus sensu stricto in Sardinia (Italy). Parasitol Int 77:102120. https:\/\/doi.org\/10.1016\/j.parint.2020.102120","journal-title":"Parasitol Int"},{"issue":"1","key":"7811_CR9","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0002017","volume":"7","author":"G Boubaker","year":"2013","unstructured":"Boubaker G, Macchiaroli N, Prada L, Cucher MA, Rosenzvit MC, Ziadinov I, Deplazes P, Saarma U, Babba H, Gottstein B, Spiliotis M (2013) A multiplex PCR for the simultaneous detection and genotyping of the Echinococcus granulosus complex. PLoS Negl Trop Dis 7(1):e2017","journal-title":"PLoS Negl Trop Dis"},{"issue":"11","key":"7811_CR10","doi-asserted-by":"publisher","first-page":"706","DOI":"10.1093\/trstmh\/tru138","volume":"108","author":"B Boufana","year":"2014","unstructured":"Boufana B, Lahmar S, Reba\u00ef W, Ben Safta Z, Jebabli L, Ammar A, Kachti M, Aouadi S, Craig PS (2014) Genetic variability and haplotypes of Echinococcus isolates from Tunisia. Trans R Soc Trop Med Hyg 108(11):706\u2013714. https:\/\/doi.org\/10.1093\/trstmh\/tru138","journal-title":"Trans R Soc Trop Med Hyg"},{"key":"7811_CR11","doi-asserted-by":"publisher","first-page":"969","DOI":"10.1016\/0020-7519(93)90065-7","volume":"23","author":"J Bowles","year":"1993","unstructured":"Bowles J, McManus DP (1993) NADH dehydrogenase 1 gene sequences compared for species and strains of the genus Echinococcus. Int J Parasitol 23:969\u2013972","journal-title":"Int J Parasitol"},{"key":"7811_CR12","doi-asserted-by":"publisher","first-page":"165","DOI":"10.1016\/0166-6851(92)90109-W","volume":"54","author":"J Bowles","year":"1992","unstructured":"Bowles J, Blair D, McManus DP (1992) Genetic variants within the genus Echinococcus identified by mitochondrial DNA sequencing. Mol Biochem Parasitol 54:165\u2013173","journal-title":"Mol Biochem Parasitol"},{"key":"7811_CR13","doi-asserted-by":"publisher","first-page":"215","DOI":"10.1017\/S0031182000076332","volume":"109","author":"J Bowles","year":"1994","unstructured":"Bowles J, Blair D, McManus D (1994) Molecular genetic characterization of the cervid strain (\u2018northern form\u2019) of Echinococcus granulosus. Parasitology 109:215\u2013221","journal-title":"Parasitology"},{"key":"7811_CR14","doi-asserted-by":"publisher","first-page":"e1146","DOI":"10.1371\/journal.pntd.0001146","volume":"5","author":"E Brunetti","year":"2011","unstructured":"Brunetti E, Garcia HH, Junghanss T (2011) Cystic echinococcosis: chronic, complex, and still neglected. PLoS Negl Trop Dis 5:e1146. https:\/\/doi.org\/10.1371\/journal.pntd.0001146","journal-title":"PLoS Negl Trop Dis"},{"key":"7811_CR15","doi-asserted-by":"publisher","first-page":"1472","DOI":"10.4067\/S0717-95022016000400048","volume":"34","author":"M Carlos","year":"2016","unstructured":"Carlos M, Tamara O (2016) Molecular epidemiology of cystic echinococcosis: genotypic characterization in humans and different livestock. Int J Morphol 34:1472\u20131481","journal-title":"Int J Morphol"},{"key":"7811_CR16","doi-asserted-by":"publisher","first-page":"69","DOI":"10.1016\/j.vetpar.2014.03.009","volume":"202","author":"D Carmena","year":"2014","unstructured":"Carmena D, Cardona GA (2014) Echinococcosis in wild carnivorous species: epidemiology, genotypic diversity, and implications for veterinary public health. Vet Parasitol 202:69\u201394","journal-title":"Vet Parasitol"},{"key":"7811_CR17","doi-asserted-by":"publisher","first-page":"377","DOI":"10.1016\/j.meegid.2011.12.014","volume":"12","author":"A Casulli","year":"2012","unstructured":"Casulli A, Interisano M, Sreter T, Chitimia L, Kirkova Z, La Rosa G, Pozio E (2012) Genetic variability of Echinococcus granulosus sensu stricto in Europe inferred by mitochondrial DNA sequences. Infect Genet Evol l 12:377","journal-title":"Infect Genet Evol l"},{"key":"7811_CR18","unstructured":"CDC (2022) Resources for Health Professionals. Available at https:\/\/www.cdc.gov\/parasites\/echinococcosis\/health_professionals\/index.html. Last accessed on 12 Feb 2022"},{"key":"7811_CR19","doi-asserted-by":"publisher","first-page":"55","DOI":"10.1016\/bs.apar.2016.09.002","volume":"96","author":"PS Craig","year":"2017","unstructured":"Craig PS, Hegglin D, Lightowlers MW, Torgerson PR, Wang Q (2017) Echinococcosis: control and prevention. Adv Parasitol 96:55\u2013158","journal-title":"Adv Parasitol"},{"key":"7811_CR20","doi-asserted-by":"publisher","first-page":"317","DOI":"10.1111\/j.1469-1795.1999.tb00078.x","volume":"2","author":"KA Crandall","year":"1999","unstructured":"Crandall KA, Posada D, Vasco D (1999) Effective population sizes: missing measures and missing concepts. Anim Conserv 2:317\u2013319","journal-title":"Anim Conserv"},{"issue":"2","key":"7811_CR21","doi-asserted-by":"publisher","first-page":"166","DOI":"10.1111\/tmi.12647","volume":"21","author":"MA Cucher","year":"2016","unstructured":"Cucher MA, Macchiaroli N, Baldi G, Camicia F, Prada L, Maldonado L, Avila HG, Fox A, Gutierrez A, Negro P, Lopez R, Jensen O, Rosenzvit M, Kamenetzky L (2016) Cystic echinococcosis in South America: systematic review of species and genotypes of Echinococcus granulosus sensu lato in humans and natural domestic hosts. Trop Med Int Health 21(2):166\u2013175. https:\/\/doi.org\/10.1111\/tmi.12647","journal-title":"Trop Med Int Health"},{"key":"7811_CR22","first-page":"34","volume":"9","author":"JC Dao","year":"2006","unstructured":"Dao JC, Ge D, Wan DC (2006) Epidemiological investigation of hydatid disease in Maqu County, Gannan Prefecture. China Anim Health 9:34\u201336 (In Chinese)","journal-title":"China Anim Health"},{"issue":"8","key":"7811_CR23","doi-asserted-by":"publisher","first-page":"772","DOI":"10.1038\/nmeth.2109","volume":"9","author":"D Darriba","year":"2012","unstructured":"Darriba D, Taboada GL, Doallo R, Posada D (2012) jModelTest 2: more models, new heuristics and parallel computing. Nat Methods 9(8):772\u2013772","journal-title":"Nat Methods"},{"key":"7811_CR24","doi-asserted-by":"publisher","first-page":"315","DOI":"10.1016\/bs.apar.2016.11.001","volume":"95","author":"P Deplazes","year":"2017","unstructured":"Deplazes P, Rinaldi L, Rojas CA, Torgerson PR, Harandi MF, Romig T, Antolova D, Schurer JM, Lahmar S, Cringoli G, Magambo J (2017) Global distribution of alveolar and cystic echinococcosis. Adv Parasitol 95:315\u2013493. https:\/\/doi.org\/10.1016\/bs.apar.2016.11.001","journal-title":"Adv Parasitol"},{"issue":"3","key":"7811_CR25","doi-asserted-by":"publisher","first-page":"564","DOI":"10.1111\/j.1755-0998.2010.02847.x","volume":"10","author":"L Excoffier","year":"2010","unstructured":"Excoffier L, Lischer HE (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10(3):564\u2013567. https:\/\/doi.org\/10.1111\/j.1755-0998.2010.02847.x","journal-title":"Mol Ecol Resour"},{"key":"7811_CR26","doi-asserted-by":"publisher","first-page":"479","DOI":"10.1093\/genetics\/131.2.479","volume":"131","author":"L Excoffier","year":"1992","unstructured":"Excoffier L, Smouse PE, Quattro JM (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131:479\u2013491","journal-title":"Genetics"},{"key":"7811_CR27","doi-asserted-by":"publisher","first-page":"4363","DOI":"10.1007\/s00436-015-4673-y","volume":"114","author":"M Farhadi","year":"2015","unstructured":"Farhadi M, Fazaeli A, Haniloo A (2015) Genetic characterization of livestock and human hydatid cyst isolates from northwest Iran, using the mitochondrial cox1 gene sequence. Parasitol Res 114:4363\u20134370","journal-title":"Parasitol Res"},{"key":"7811_CR28","doi-asserted-by":"publisher","first-page":"915","DOI":"10.1093\/genetics\/147.2.915","volume":"147","author":"YX Fu","year":"1997","unstructured":"Fu YX (1997) Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147:915\u2013925","journal-title":"Genetics"},{"key":"7811_CR29","doi-asserted-by":"publisher","first-page":"39","DOI":"10.1016\/j.ijsu.2018.01.025","volume":"51","author":"TM Galeh","year":"2018","unstructured":"Galeh TM, Spotin A, Mahami-Oskouei M, Carmena D, Rahimi MT, Barac A, Ghoyounchi R, Berahmat R, Ahmadpour E (2018) The seroprevalence rate and population genetic structure of human cystic echinococcosis in the Middle East: a systematic review and meta-analysis. Int J Surg 51:39\u201348","journal-title":"Int J Surg"},{"key":"7811_CR30","doi-asserted-by":"publisher","first-page":"711332","DOI":"10.3389\/fcimb.2021.711332","volume":"11","author":"Y Gao","year":"2021","unstructured":"Gao Y, Wang W, Lyu C, Wei XY, Chen Y, Zhao Q, Ran ZG, Xia YQ (2021) Meta-analysis of the prevalence of Echinococcus in sheep in China from 1983 to 2020. Front Cell Infect Microbiol 11:711332. https:\/\/doi.org\/10.3389\/fcimb.2021.711332","journal-title":"Front Cell Infect Microbiol"},{"key":"7811_CR31","doi-asserted-by":"publisher","first-page":"457","DOI":"10.1214\/ss\/1177011136","volume":"7","author":"A Gelman","year":"1992","unstructured":"Gelman A, Rubin DA (1992) Inference from iterative simulation using multiple sequences. Stat Sci 7:457\u2013472","journal-title":"Stat Sci"},{"key":"7811_CR32","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0007701","volume":"30","author":"P Giraudoux","year":"2019","unstructured":"Giraudoux P, Zhao Y, Afonso E, Yan HB, Knapp J, Rogan MT, Shi DZ, Jia WZ, Craig PS (2019) Long-term retrospective assessment of a transmission hotspot for human alveolar echinococcosis in mid-west China. PLoS Negl Trop Dis 30:e0007701","journal-title":"PLoS Negl Trop Dis"},{"issue":"4","key":"7811_CR33","doi-asserted-by":"publisher","first-page":"e0009268","DOI":"10.1371\/journal.pntd.0009268","volume":"15","author":"QL Gong","year":"2021","unstructured":"Gong QL, Ge GY, Wang Q, Tian T, Liu F, Diao NC, Nie LB, Zong Y, Li JM, Shi K, Leng X (2021) Meta-analysis of the prevalence of Echinococcus in dogs in China from 2010 to 2019. PLoS Negl Trop Dis 15(4):e0009268. https:\/\/doi.org\/10.1371\/journal.pntd.0009268","journal-title":"PLoS Negl Trop Dis"},{"key":"7811_CR34","doi-asserted-by":"publisher","first-page":"1303","DOI":"10.1007\/s003300050293","volume":"7","author":"KJ Gossios","year":"1997","unstructured":"Gossios KJ, Kontoyiannis DS, Dascalogiannaki M, Gourtsoyiannis NC (1997) Uncommon locations of hydatid disease: CT appearances. Eur Radiol 7:1303\u20131308. https:\/\/doi.org\/10.1007\/s003300050293","journal-title":"Eur Radiol"},{"key":"7811_CR35","doi-asserted-by":"publisher","first-page":"696","DOI":"10.1080\/10635150390235520","volume":"52","author":"S Guindon","year":"2003","unstructured":"Guindon S, Gascuel O (2003) A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood. Syst Biol 52:696\u2013704","journal-title":"Syst Biol"},{"key":"7811_CR36","doi-asserted-by":"publisher","first-page":"153","DOI":"10.3347\/kjp.2019.57.2.153","volume":"57","author":"BP Guo","year":"2019","unstructured":"Guo BP, Zhang ZZ, Zheng XT, Guo YZ, Guo G, Zhao L, Cai R, Wang BJ, Yang M, Shou X, Zhang WB, Jia B (2019) Prevalence and molecular characterization of Echinococcus granulosus sensu stricto in northern Xinjiang, China. Korean J Parasitol 57:153\u2013159","journal-title":"Korean J Parasitol"},{"issue":"1","key":"7811_CR37","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0008891","volume":"15","author":"BP Guo","year":"2021","unstructured":"Guo BP, Zhang ZG, Guo YZ, Guo G, Wang HY, Ma JJ, Chen RG, Zheng XT, Bao JL, He L, Wang T, Qi WJ, Tian MX, Wang JW, Zhou CL, Giraudoux P, Marston CG, McManus DP, Zhang WB, Li J (2021) High endemicity of alveolar echinococcosis in Yili Prefecture, Xinjiang Autonomous Region, the People\u2019s Republic of China: infection status in different ethnic communities and in small mammals. PLoS Negl Trop Dis 15(1):e0008891","journal-title":"PLoS Negl Trop Dis"},{"key":"7811_CR38","doi-asserted-by":"publisher","first-page":"234","DOI":"10.1645\/GE-173R","volume":"90","author":"KL Haag","year":"2004","unstructured":"Haag KL, Ayala FJ, Kamenetzky L, Gutierrez AM, Rosenzvit M (2004) Livestock trade history, geography, and parasite strains: the mitochondrial genetic structure of Echinococcus granulosus in Argentina. J Parasitol 90:234\u2013239","journal-title":"J Parasitol"},{"key":"7811_CR39","first-page":"1","volume":"13","author":"E Hajialilo","year":"2011","unstructured":"Hajialilo E, Harandi MF, Sharbatkhori M, Mirhendi H, Rostami S (2011) Genetic characterization of Echinococcus granulosus in camels, cattle and sheep from the south-east of Iran indicates the presence of the G3 genotype. J Helminthol 13:1\u20138","journal-title":"J Helminthol"},{"issue":"41","key":"7811_CR40","first-page":"95","volume":"41","author":"TA Hall","year":"1999","unstructured":"Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95\/98\/NT. In Nucleic Acids Symposium Series 41(41):95\u201398","journal-title":"In Nucleic Acids Symposium Series"},{"issue":"10","key":"7811_CR41","doi-asserted-by":"publisher","first-page":"1305","DOI":"10.1017\/S0031182019000544","volume":"146","author":"XM Han","year":"2019","unstructured":"Han XM, Jian YN, Zhang XY, Ma LQ, Zhu WJ, Cai QG, Wu SL, Wang XQ, Shi BQ (2019) Genetic characterization of Echinococcus isolates from various intermediate hosts in the Qinghai-Tibetan Plateau Area, China. Parasitology 146(10):1305\u20131312","journal-title":"Parasitology"},{"issue":"9","key":"7811_CR42","doi-asserted-by":"publisher","first-page":"639","DOI":"10.1038\/nrg2611","volume":"10","author":"KE Holsinger","year":"2009","unstructured":"Holsinger KE, Weir BS (2009) Genetics in geographically structured populations: defining, estimating and interpreting Fst. Nat Rev Genet 10(9):639\u2013650. https:\/\/doi.org\/10.1038\/nrg2611","journal-title":"Nat Rev Genet"},{"key":"7811_CR43","unstructured":"Hsieh CM, Falkenheim VC (2022) \u201cXinjiang\u201d. Encyclopedia Britannica, available at https:\/\/www.britannica.com\/place\/Xinjiang. Accessed 12 Aug 2022"},{"key":"7811_CR44","doi-asserted-by":"publisher","first-page":"1420","DOI":"10.3201\/eid2507.181585","volume":"25","author":"RQ Hua","year":"2019","unstructured":"Hua RQ, Xie Y, Song HY, Shi Y, Zhan JF, Wu MD, Gu XB, Peng XR, Yang GY (2019) Echinococcus canadensis G8 Tapeworm Infection in a Sheep, China, 2018. Emerg Infect Dis 25:1420\u20131422","journal-title":"Emerg Infect Dis"},{"issue":"10","key":"7811_CR45","doi-asserted-by":"publisher","first-page":"1089","DOI":"10.1017\/S0031182009990461","volume":"136","author":"M H\u00fcttner","year":"2009","unstructured":"H\u00fcttner M, Romig T (2009) Echinococcus species in African wildlife. Parasitology 136(10):1089\u20131095","journal-title":"Parasitology"},{"key":"7811_CR46","doi-asserted-by":"publisher","first-page":"1205","DOI":"10.1016\/j.ijpara.2005.07.014","volume":"35","author":"DJ Jenkins","year":"2005","unstructured":"Jenkins DJ, Romig T, Thompson RC (2005) Emergence\/re-emergence of Echinococcus spp.\u2013a global update. Int J Parasitol 35:1205\u20131219. https:\/\/doi.org\/10.1016\/j.ijpara.2005.07.014","journal-title":"Int J Parasitol"},{"issue":"7","key":"7811_CR47","doi-asserted-by":"publisher","first-page":"871","DOI":"10.1017\/S0031182021000494","volume":"148","author":"G Joanny","year":"2021","unstructured":"Joanny G, Mehmood N, Dess\u00ec G, Tamponi C, Nonnis F, Hosri C, Saarma U, Varcasia A, Scala A (2021) Cystic echinococcosis in sheep and goats of Lebanon. Parasitology 148(7):871\u2013878","journal-title":"Parasitology"},{"key":"7811_CR48","doi-asserted-by":"publisher","first-page":"587","DOI":"10.1038\/nmeth.4285","volume":"14","author":"S Kalyaanamoorthy","year":"2017","unstructured":"Kalyaanamoorthy S, Minh BQ, Wong TKF, von Haeseler A, Jermiin LS (2017) ModelFinder: fast model selection for accurate phylogenetic estimates. Nat Methods 14:587\u2013589. https:\/\/doi.org\/10.1038\/nmeth.4285","journal-title":"Nat Methods"},{"key":"7811_CR49","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1186\/s12920-015-0115-z","volume":"8","author":"R Karki","year":"2015","unstructured":"Karki R, Pandya D, Elston RC, Ferlini C (2015) Defining \u201cmutation\u201d and \u201cpolymorphism\u201d in the era of personal genomics. BMC Med Genomics 8:37. https:\/\/doi.org\/10.1186\/s12920-015-0115-z","journal-title":"BMC Med Genomics"},{"key":"7811_CR50","doi-asserted-by":"publisher","first-page":"259","DOI":"10.1016\/bs.apar.2016.09.006","volume":"96","author":"P Kern","year":"2017","unstructured":"Kern P, Da Silva AM, Akhan O, M\u00fcllhaupt B, Vizcaychipi KA, Budke C, Vuitton DA (2017) The echinococcoses: diagnosis, clinical management and burden of disease. Adv Parasitol 96:259\u2013369. https:\/\/doi.org\/10.1016\/bs.apar.2016.09.006","journal-title":"Adv Parasitol"},{"issue":"13","key":"7811_CR51","doi-asserted-by":"publisher","first-page":"1790","DOI":"10.1017\/S0031182016001530","volume":"143","author":"L Kinkar","year":"2016","unstructured":"Kinkar L, Laurim\u00e4e T, Simsek S, Balkaya I, Casulli A, Manfredi MT, Ponce-Gordo F, Varcasia A, Lavikainen A, Gonzalez LM, Rehbein S (2016) High-resolution phylogeography of zoonotic tapeworm Echinococcus granulosus sensu stricto genotype G1 with an emphasis on its distribution in Turkey, Italy and Spain. Parasitology 143(13):1790\u20131801. https:\/\/doi.org\/10.1017\/S0031182016001530","journal-title":"Parasitology"},{"key":"7811_CR52","doi-asserted-by":"publisher","first-page":"178","DOI":"10.1016\/j.meegid.2018.06.026","volume":"64","author":"L Kinkar","year":"2018","unstructured":"Kinkar L, Laurim\u00e4e T, Acosta-Jamett G, Andresiuk V, Balkaya I, Casulli A, Gasser RB, Gonz\u00e1lez LM, Haag KL, Zait H, Irshadullah M, Jabbar A, Jenkins DJ, Manfredi MT, Mirhendi H, M\u2019rad S, Rostami-Nejad M, Oudni-M\u2019rad M, Pierangeli NB, Ponce-Gordo F, Rehbein S, Sharbatkhori M, Kia EB, Simsek S, Soriano SV, Sprong H, \u0160n\u00e1bel V, Umhang G, Varcasia A, Saarma U (2018a) Distinguishing Echinococcus granulosus sensu stricto genotypes G1 and G3 with confidence: a practical guide. Infect Genet Evol 64:178\u2013184. https:\/\/doi.org\/10.1016\/j.meegid.2018.06.026","journal-title":"Infect Genet Evol"},{"key":"7811_CR53","doi-asserted-by":"publisher","first-page":"1613","DOI":"10.1017\/S0031182018000549","volume":"145","author":"L Kinkar","year":"2018","unstructured":"Kinkar L, Laurim\u00e4e T, Balkaya I, Casulli A, Zait H, Irshadullah M, Sharbatkhori M, Mirhendi H, Rostami Nejad M, Ponce-Gordo F, Rehbein S, Kia EB, Simsek S, \u0160nabel V, Umhang G, Varcasia A, Saarma U (2018b) Genetic diversity and phylogeography of the elusive, but epidemiologically important Echinococcus granulosus sensu stricto genotype G3. Parasitology 145:1613\u20131622. https:\/\/doi.org\/10.1017\/S0031182018000549","journal-title":"Parasitology"},{"issue":"9\u201310","key":"7811_CR54","doi-asserted-by":"publisher","first-page":"729","DOI":"10.1016\/j.ijpara.2018.03.006","volume":"48","author":"L Kinkar","year":"2018","unstructured":"Kinkar L, Laurim\u00e4e T, Acosta-Jamett G, Andresiuk V, Balkaya I, Casulli A, Gasser RB, Giessen J, Miguel Gonz\u00e1lez L, Haag KL, Zait H, Irshadullah M, Jabbar A, Jenkins DJ, Kia EB, Manfredi MT, Mirhendi H, M\u2019rad S, Rostami-Nejad M, Oudni-M\u2019rad M, Beatriz Pierangeli N, Ponce-Gordo F, Rehbein S, Sharbatkhori M, Simsek S, Viviana Soriano S, Sprong H, \u0160n\u00e1bel V, Umhang G, Varcasia A, Saarma U (2018c) Global phylogeography and genetic diversity of the zoonotic tapeworm Echinococcus granulosus sensu stricto genotype G1. Int J Parasitol 48(9\u201310):729\u2013742. https:\/\/doi.org\/10.1016\/j.ijpara.2018.03.006","journal-title":"Int J Parasitol"},{"issue":"1","key":"7811_CR55","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/s13071-019-3492-x","volume":"12","author":"L Kinkar","year":"2019","unstructured":"Kinkar L, Korhonen PK, Cai H, Gauci CG, Lightowlers MW, Saarma U, Jenkins DJ, Li J, Li J, Young ND, Gasser RB (2019) Long-read sequencing reveals a 4.4 kb tandem repeat region in the mitogenome of Echinococcus granulosus (sensu stricto) genotype G1. Parasites Vectors 12(1):1\u20137","journal-title":"Parasites Vectors"},{"issue":"1","key":"7811_CR56","doi-asserted-by":"publisher","first-page":"18","DOI":"10.1093\/sysbio\/42.1.18","volume":"42","author":"A Knight","year":"1993","unstructured":"Knight A, Mindell DP (1993) Substitution bias, weighting of DNA sequence evolution, and the phylogenetic position of Fea\u2019s viper. Syst Biol 42(1):18\u201331","journal-title":"Syst Biol"},{"key":"7811_CR57","doi-asserted-by":"publisher","first-page":"1870","DOI":"10.1093\/molbev\/msw054","volume":"33","author":"S Kumar","year":"2016","unstructured":"Kumar S, Stecher G, Tamura K (2016) MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol 33:1870\u20131874. https:\/\/doi.org\/10.1093\/molbev\/msw054","journal-title":"Mol Biol Evol"},{"issue":"1","key":"7811_CR58","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/s13071-015-0796-3","volume":"8","author":"L Laurimaa","year":"2015","unstructured":"Laurimaa L, Davison J, S\u00fcld K, Plumer L, Oja R, Moks E, Keis M, Hindrikson M, Kinkar L, Laurim\u00e4e T, Abner J (2015) First report of highly pathogenic Echinococcus granulosus genotype G1 in dogs in a European urban environment. Parasit Vectors 8(1):1\u20135","journal-title":"Parasit Vectors"},{"key":"7811_CR59","doi-asserted-by":"publisher","first-page":"290","DOI":"10.1016\/j.meegid.2016.09.015","volume":"45","author":"T Laurim\u00e4e","year":"2016","unstructured":"Laurim\u00e4e T, Kinkar L, Andresiuk V, Haag KL, Ponce-Gordo F, Acosta Jamett G, Garate T, Gonzalez LM, Saarma U (2016) Genetic diversity and phylogeography of highly zoonotic Echinococcus granulosus genotype G1 in the Americas (Argentina, Brazil, Chile and Mexico) based on 8279 bp of mtDNA. Infect Genet Evol 45:290\u2013296. https:\/\/doi.org\/10.1016\/j.meegid.2016.09.015","journal-title":"Infect Genet Evol"},{"key":"7811_CR60","doi-asserted-by":"publisher","first-page":"85","DOI":"10.1016\/j.meegid.2018.06.016","volume":"64","author":"T Laurim\u00e4e","year":"2018","unstructured":"Laurim\u00e4e T, Kinkar L, Romig T, Omer RA, Casulli A, Umhang G, Gasser R, Jabbar A, Sharbatkori M, Mirhendi H, Ponce-Gordo F, Lazzarini L, Soriano SV, Varcasia A, Rostami-Nejad M, Andresiuk V, Maravilla P, Gonzalez L, Dybicz M, Gawor J, \u0160arkunas M, Snabel V, Kuzmina T, Saarma U (2018) The benefits of analysing complete mitochondrial genomes: deep insights into the phylogeny and population structure of Echinococcus granulosus sensu lato genotypes G6 and G7. Infect Genet Evol 64:85\u201394. https:\/\/doi.org\/10.1016\/j.meegid.2018.06.016","journal-title":"Infect Genet Evol"},{"key":"7811_CR61","doi-asserted-by":"publisher","DOI":"10.1016\/j.meegid.2019.103941","volume":"74","author":"T Laurim\u00e4e","year":"2019","unstructured":"Laurim\u00e4e T, Kinkar L, Romig T, Umhang G, Casulli A, Omer RA, Sharbatkhori M, Mirhendi H, Ponce-Gordo F, Lazzarini LE, Soriano SV (2019) Analysis of nad2 and nad5 enables reliable identification of genotypes G6 and G7 within the species complex Echinococcus granulosus sensu lato. Infect Genet Evol 74:103941","journal-title":"Infect Genet Evol"},{"key":"7811_CR62","doi-asserted-by":"publisher","first-page":"207","DOI":"10.1017\/S0031182003003780","volume":"127","author":"A Lavikainen","year":"2003","unstructured":"Lavikainen A, Lehtinen MJ, Meri T, Hirvel\u00e4-Koski V, Meri S (2003) Molecular genetic characterization of the Fennoscandian cervid strain, a new genotypic group (G10) of Echinococcus granulosus. Parasitology 127:207\u2013215","journal-title":"Parasitology"},{"issue":"9","key":"7811_CR63","doi-asserted-by":"publisher","first-page":"1110","DOI":"10.1111\/2041-210X.12410","volume":"6","author":"JW Leigh","year":"2015","unstructured":"Leigh JW, Bryant D (2015) PopART: Full-feature software for haplotype network construction. Methods Ecol Evol 6(9):1110\u20131116. https:\/\/doi.org\/10.1111\/2041-210X.12410","journal-title":"Methods Ecol Evol"},{"key":"7811_CR64","first-page":"1","volume":"50","author":"JF Li","year":"2018","unstructured":"Li JF (2018) Epidemiological investigation of sheep echinococcosis in Yumen City. Gansu Agr Univ 50:1\u201350 (In Chinese)","journal-title":"Gansu Agr Univ"},{"key":"7811_CR65","doi-asserted-by":"publisher","first-page":"17","DOI":"10.1016\/j.actatropica.2015.02.018","volume":"147","author":"D Li","year":"2015","unstructured":"Li D, Gao Q, Liu J, Feng Y, Ning WH, Dong YQ, Tao LX, Li JY, Tian XJ, Gu J, Xin D (2015) Knowledge, attitude, and practices (KAP) and risk factors analysis related to cystic echinococcosis among residents in Tibetan communities, Xiahe County, Gansu Province, China. Acta Trop 147:17\u201322","journal-title":"Acta Trop"},{"issue":"6","key":"7811_CR66","doi-asserted-by":"publisher","first-page":"1201","DOI":"10.1007\/s00436-008-0894-7","volume":"102","author":"SM Ma","year":"2008","unstructured":"Ma SM, Maillard S, Zhao HL, Huang X, Wang H, Geng PL, Bart JM, Piarroux R (2008) Assessment of Echinococcus granulosus polymorphism in Qinghai province, People\u2019s Republic of China. Parasitol Res 102(6):1201\u20131206","journal-title":"Parasitol Res"},{"issue":"7","key":"7811_CR67","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0009547","volume":"15","author":"T Ma","year":"2021","unstructured":"Ma T, Jiang D, Hao MM, Fan PW, Zhang SZ, Quzhen GS, Xue CZ, Han S, Wu WP, Zheng CJ, Ding FU (2021) Geographical detector-based influence factors analysis for echinococcosis prevalence in Tibet, China. Plos Negl Trop Dis 15(7):e0009547","journal-title":"Plos Negl Trop Dis"},{"key":"7811_CR68","doi-asserted-by":"publisher","first-page":"77","DOI":"10.1016\/j.exppara.2016.10.017","volume":"171","author":"M Mahami-Oskouei","year":"2016","unstructured":"Mahami-Oskouei M, Kaseb-Yazdanparast A, Spotin A, Shahbazi A, Adibpour M, Ahmadpour E, Ghabouli-Mehrabani N (2016) Gene flow for Echinococcus granulosus meta-populations determined by mitochondrial sequences: a reliable approach for reflecting epidemiological drift of parasite among neighboring countries. Exp Parasitol 171:77\u201383","journal-title":"Exp Parasitol"},{"issue":"5","key":"7811_CR69","doi-asserted-by":"publisher","first-page":"434","DOI":"10.1046\/j.1365-2540.2000.00774.x","volume":"85","author":"JP Mart\u00edn","year":"2000","unstructured":"Mart\u00edn JP, Hern\u00e1ndez Bermejo JE (2000) Genetic variation in the endemic and endangered Rosmarinus tomentosus Huber-Morath and Maire (Labiatae) using RAPD markers. Heredity 85(5):434\u2013443","journal-title":"Heredity"},{"key":"7811_CR70","doi-asserted-by":"publisher","first-page":"104271","DOI":"10.1016\/j.meegid.2020.104271","volume":"81","author":"N Mehmood","year":"2020","unstructured":"Mehmood N, Muqaddas H, Arshad M, Ullah MI, Khan ZI (2020a) Comprehensive study based on mtDNA signature (nad1) providing insights on Echinococcus granulosus s.s. genotypes from Pakistan and potential role of buffalo-dog cycle. Infect Genet Evol 81:104271. https:\/\/doi.org\/10.1016\/j.meegid.2020.104271","journal-title":"Infect Genet Evol"},{"issue":"9","key":"7811_CR71","doi-asserted-by":"publisher","first-page":"1055","DOI":"10.1017\/S0031182020000785","volume":"147","author":"S Mehmood","year":"2020","unstructured":"Mehmood S, Simsek S, Celik F, Kesik HK, Kilinc SG, Ahmed H (2020b) Molecular survey on cattle and sheep hydatidosis and first detection of Echinococcus canadensis (G6\/G7) in sheep in Turkey. Parasitology 147(9):1055\u20131062","journal-title":"Parasitology"},{"issue":"7","key":"7811_CR72","doi-asserted-by":"publisher","first-page":"2533","DOI":"10.1007\/s00436-021-07186-9","volume":"120","author":"N Mehmood","year":"2021","unstructured":"Mehmood N, Dess\u00ec G, Ahmed F, Joanny G, Tamponi C, Cappai MG, Varcasia A, Scala A (2021) Genetic diversity and transmission patterns of Echinococcus granulosus sensu stricto among domestic ungulates of Sardinia, Italy. Parasitol Res 120(7):2533\u20132542","journal-title":"Parasitol Res"},{"key":"7811_CR73","doi-asserted-by":"publisher","first-page":"1061","DOI":"10.1093\/genetics\/142.3.1061","volume":"142","author":"Y Michalakis","year":"1996","unstructured":"Michalakis Y, Excoffier L (1996) A generic estimation of population subdivision using distances between alleles with special reference for microsatellite loci. Genetics 142:1061\u20131064","journal-title":"Genetics"},{"issue":"2","key":"7811_CR74","doi-asserted-by":"publisher","first-page":"125","DOI":"10.1016\/j.ijid.2008.03.037","volume":"13","author":"P Moro","year":"2009","unstructured":"Moro P, Schantz PM (2009) Echinococcosis: a review. Int J Infect Dis 13(2):125\u2013133","journal-title":"Int J Infect Dis"},{"issue":"3","key":"7811_CR75","doi-asserted-by":"publisher","first-page":"456","DOI":"10.4269\/ajtmh.2011.11-0112","volume":"85","author":"K Nakamura","year":"2011","unstructured":"Nakamura K, Ito A, Yara S, Haranaga S, Hibiya K, Hirayasu T, Sako Y, Fujita J (2011) Case report: a case of pulmonary and hepatic cystic echinococcosis of CE1 stage in a healthy Japanese female that was suspected to have been acquired during her stay in the United Kingdom. Am J Trop Med Hyg 85(3):456\u2013459","journal-title":"Am J Trop Med Hyg"},{"issue":"6","key":"7811_CR76","doi-asserted-by":"publisher","first-page":"497","DOI":"10.1016\/S1567-7249(02)00040-5","volume":"1","author":"M Nakao","year":"2002","unstructured":"Nakao M, Yokoyama N, Sako Y, Fukunaga M, Ito A (2002) The complete mitochondrial DNA sequence of the cestode Echinococcus multilocularis (Cyclophyllidea: Taeniidae). Mitochondrion 1(6):497\u2013509","journal-title":"Mitochondrion"},{"issue":"3","key":"7811_CR77","doi-asserted-by":"publisher","first-page":"633","DOI":"10.1645\/0022-3395(2003)089[0633:TMGOTT]2.0.CO;2","volume":"89","author":"M Nakao","year":"2003","unstructured":"Nakao M, Sako Y, Ito A (2003) The mitochondrial genome of the tapeworm Taenia solium: a finding of the abbreviated stop codon U. J Parasitol 89(3):633\u2013635","journal-title":"J Parasitol"},{"issue":"5","key":"7811_CR78","doi-asserted-by":"publisher","first-page":"713","DOI":"10.1017\/S0031182006001934","volume":"134","author":"M Nakao","year":"2006","unstructured":"Nakao M, McManus DP, Schantz PM, Craig PS, Ito A (2006) A molecular phylogeny of the genus Echinococcus inferred from complete mitochondrial genomes. Parasitology 134(5):713\u2013722","journal-title":"Parasitology"},{"key":"7811_CR79","doi-asserted-by":"publisher","first-page":"379","DOI":"10.1016\/j.ijpara.2009.09.006","volume":"40","author":"M Nakao","year":"2010","unstructured":"Nakao M, Li T, Han X, Ma X, Xiao N, Qiu J, Wang H, Yanagida T, Mamuti W, Wen H, Moro PL, Giraudoux P, Craig PS, Ito A (2010) Genetic polymorphisms of Echinococcus tapeworms in China as determined by mitochondrial and nuclear DNA sequences. Int J Parasitol 40:379\u2013385","journal-title":"Int J Parasitol"},{"issue":"12\u201313","key":"7811_CR80","doi-asserted-by":"publisher","first-page":"1017","DOI":"10.1016\/j.ijpara.2013.06.002","volume":"43","author":"M Nakao","year":"2013","unstructured":"Nakao M, Lavikainen A, Yanagida T, Ito A (2013a) Phylogenetic systematics of the genus Echinococcus (Cestoda: Taeniidae). Int J Parasitol 43(12\u201313):1017\u20131029","journal-title":"Int J Parasitol"},{"issue":"13","key":"7811_CR81","doi-asserted-by":"publisher","first-page":"1625","DOI":"10.1017\/S0031182013000565","volume":"140","author":"M Nakao","year":"2013","unstructured":"Nakao M, Yanagida T, Konyaev S, Lavikainen A, Odnokurtsev VA, Zaikov VA, Ito A (2013b) Mitochondrial phylogeny of the genus Echinococcus (Cestoda: Taeniidae) with emphasis on relationships among Echinococcus canadensis genotypes. Parasitology 140(13):1625\u20131636","journal-title":"Parasitology"},{"key":"7811_CR82","doi-asserted-by":"publisher","first-page":"268","DOI":"10.1093\/molbev\/msu300","volume":"32","author":"LT Nguyen","year":"2015","unstructured":"Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ (2015) IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol 32:268\u2013274. https:\/\/doi.org\/10.1093\/molbev\/msu300","journal-title":"Mol Biol Evol"},{"issue":"5","key":"7811_CR83","doi-asserted-by":"publisher","first-page":"569","DOI":"10.1017\/S0031182004004871","volume":"128","author":"A Obwaller","year":"2004","unstructured":"Obwaller A, Schneider R, Walochnik J, Gollackner B, Deutz A, Janitschke K, Asp\u00f6ck H, Auer H (2004) Echinococcus granulosus strain differentiation based on sequence heterogeneity in mitochondrial genes of cytochrome c oxidase-1 and NADH dehydrogenase-1. Parasitology 128(5):569\u2013575","journal-title":"Parasitology"},{"key":"7811_CR84","doi-asserted-by":"publisher","first-page":"608","DOI":"10.1186\/s13071-019-3857-1","volume":"12","author":"JA Ohiolei","year":"2019","unstructured":"Ohiolei JA, Xia CY, Li L, Liu JZ, Tang WQ, Wu YT, Danqulamu, Zhu GQ, Shi B, Fu BQ, Yin H, Yan HB, Jia WZ (2019) Genetic variation of Echinococcus spp. in yaks and sheep in the Tibet Autonomous Region of China based on mitochondrial DNA. Parasit Vectors 12:608","journal-title":"Parasit Vectors"},{"key":"7811_CR85","doi-asserted-by":"publisher","first-page":"109695","DOI":"10.1016\/j.vetpar.2022.109695","volume":"304","author":"JA Ohiolei","year":"2022","unstructured":"Ohiolei JA, Yan HB, Odeniran PO, Li L, Shumuye NA, Qurishi SA, Isaac C, Fu BQ, Jia WZ (2022) Echinococcus granulosus sensu lato in animal intermediate hosts: what is with the organ location? Vet Parasitol 304:109695. https:\/\/doi.org\/10.1016\/j.vetpar.2022.109695","journal-title":"Vet Parasitol"},{"key":"7811_CR86","unstructured":"OIE (2022) Echinococcosis. Available at https:\/\/www.oie.int\/en\/disease\/echinococcosis\/. Last accessed on 12 Feb 2022"},{"issue":"8","key":"7811_CR87","doi-asserted-by":"publisher","first-page":"1166","DOI":"10.1093\/bioinformatics\/bts091","volume":"28","author":"K Okonechnikov","year":"2012","unstructured":"Okonechnikov K, Golosova O, Fursov M, UGENE team (2012) Unipro UGENE: a unified bioinformatics toolNit. Bioinformatics 28(8):1166\u20131167. https:\/\/doi.org\/10.1093\/bioinformatics\/bts091","journal-title":"Bioinformatics"},{"issue":"3\u20134","key":"7811_CR88","doi-asserted-by":"publisher","first-page":"340","DOI":"10.1016\/j.vetpar.2010.01.004","volume":"169","author":"RA Omer","year":"2010","unstructured":"Omer RA, Dinkel A, Romig T, Mackenstedt U, Elnahas AA, Aradaib IE, Ahmed ME, Elmalik KH, Adam A (2010) A molecular survey of cystic echinococcosis in Sudan. Vet Parasitol 169(3\u20134):340\u2013346","journal-title":"Vet Parasitol"},{"key":"7811_CR89","doi-asserted-by":"publisher","first-page":"58","DOI":"10.1016\/j.vetpar.2009.06.021","volume":"165","author":"RP Pednekar","year":"2009","unstructured":"Pednekar RP, Gatne ML, Thompson RC, Traub RJ (2009) Molecular and morphological characterization of Echinococcus from food producing animals in India. Vet Parasitol 165:58\u201365. https:\/\/doi.org\/10.1016\/j.vetpar.2009.06.021","journal-title":"Vet Parasitol"},{"key":"7811_CR90","first-page":"51","volume":"18","author":"YZ Qi","year":"2002","unstructured":"Qi YZ, Wen ZQ, Song T, Wang YS (2002) Epidemiological investigation of hydatidosis in Tianzhu Tibetan Autonomous County, Gansu Province. Endemic Dis Bull 18:51\u201353 (In Chinese)","journal-title":"Endemic Dis Bull"},{"key":"7811_CR91","doi-asserted-by":"publisher","first-page":"161","DOI":"10.1186\/s40249-017-0374-3","volume":"6","author":"MB Qian","year":"2017","unstructured":"Qian MB, Abelaridder B, Wu WP, Zhou XN (2017) Combating echinococcosis in China: strengthening the research and development. Infect Dis Poverty 6:161. https:\/\/doi.org\/10.1186\/s40249-017-0374-3","journal-title":"Infect Dis Poverty"},{"issue":"1","key":"7811_CR92","doi-asserted-by":"publisher","first-page":"9","DOI":"10.1016\/j.ijpara.2013.08.008","volume":"44","author":"CAA Rojas","year":"2014","unstructured":"Rojas CAA, Romig T, Lightowlers MW (2014) Echinococcus granulosus sensu lato genotypes infecting humans\u2013review of current knowledge. Int J Parasitol 44(1):9\u201318. https:\/\/doi.org\/10.1016\/j.ijpara.2013.08.008","journal-title":"Int J Parasitol"},{"issue":"2","key":"7811_CR93","doi-asserted-by":"publisher","first-page":"112","DOI":"10.1016\/j.parint.2016.12.001","volume":"66","author":"CAA Rojas","year":"2017","unstructured":"Rojas CAA, Ebi D, Paredes R, Acosta-Jamett G, Urriola N, Roa JC, Manterola C, Cortes S, Romig T, Scheerlinck JP, Lightowlers MW (2017) High intraspecific variability of Echinococcus granulosus sensu stricto in Chile. Parasitol Int 66(2):112\u2013115. https:\/\/doi.org\/10.1016\/j.parint.2016.12.001","journal-title":"Parasitol Int"},{"key":"7811_CR94","doi-asserted-by":"publisher","first-page":"76","DOI":"10.1016\/j.vetpar.2015.07.035","volume":"213","author":"T Romig","year":"2015","unstructured":"Romig T, Ebi D, Lato MW (2015) Taxonomy and molecular epidemiology of Echinococcus granulosus sensu lato. Vet Parasitol 213:76\u201384","journal-title":"Vet Parasitol"},{"key":"7811_CR95","doi-asserted-by":"publisher","first-page":"213","DOI":"10.1016\/bs.apar.2016.11.002","volume":"95","author":"T Romig","year":"2017","unstructured":"Romig T, Deplazes P, Jenkins D, Giraudoux P, Massolo A, Craig PS, Wassermann M, Takahashi K, de la Rue M (2017) Ecology and life cycle patterns of Echinococcus species. Adv Parasitol 95:213\u2013314. https:\/\/doi.org\/10.1016\/bs.apar.2016.11.002","journal-title":"Adv Parasitol"},{"key":"7811_CR96","doi-asserted-by":"publisher","first-page":"3299","DOI":"10.1093\/molbev\/msx248","volume":"34","author":"J Rozas","year":"2017","unstructured":"Rozas J, Ferrer-Mata A, Sanchez-DelBarrio JC, Guirao Librado P, Ramos-Onsins SE, Sanchez-Gracia A (2017) DnaSP v6: DNA sequence polymorphism analysis of large datasets. Mol Biol Evol 34:3299\u20133302. https:\/\/doi.org\/10.1093\/molbev\/msx248","journal-title":"Mol Biol Evol"},{"key":"7811_CR97","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1017\/S0031182096008062","volume":"114","author":"JC Scott","year":"1997","unstructured":"Scott JC, Stefaniak J, Pawlowski ZS, McManus DP (1997) Molecular genetic analysis of human cystic hydatid cases from Poland: identification of a new genotypic group (G9) of Echinococcus granulosus. Parasitology 114:37\u201343","journal-title":"Parasitology"},{"key":"7811_CR98","doi-asserted-by":"publisher","first-page":"38","DOI":"10.1590\/S1678-9946201658038","volume":"58","author":"M Sharbatkhori","year":"2016","unstructured":"Sharbatkhori M, Tanzifi A, Rostami S, Rostami M, Harandi MF (2016) Echinococcus granulosus sensu lato genotypes in domestic livestock and humans in Golestan Province, Iran. Rev Inst Med Trop Sao Paulo 58:38","journal-title":"Rev Inst Med Trop Sao Paulo"},{"issue":"12","key":"7811_CR99","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0082904","volume":"8","author":"M Sharma","year":"2013","unstructured":"Sharma M, Fomda BA, Mazta S, Sehgal R, Bagicha Singh B, Malla N (2013) Genetic diversity and population genetic structure analysis of Echinococcus granulosus sensu stricto complex based on mitochondrial DNA signature. PLoS ONE 8(12):e82904","journal-title":"PLoS ONE"},{"key":"7811_CR100","doi-asserted-by":"publisher","first-page":"398","DOI":"10.1186\/s13071-019-3653-y","volume":"12","author":"YL Shi","year":"2019","unstructured":"Shi YL, Wan XL, Wang ZY, Li J, Jiang ZH, Yang YC (2019) First description of Echinococcus ortleppi infection in China. Parasit Vectors 12:398","journal-title":"Parasit Vectors"},{"issue":"9","key":"7811_CR101","first-page":"1758","volume":"49","author":"A Siyadatpanah","year":"2020","unstructured":"Siyadatpanah A, Daryani A, Sarvi S, Spotin A, Sharif M, Dizaji RE, Anvari D, Zeydi AE, Kohansal MH, Higuita NIA, Hosseini SA (2020) Phylogeography and genetic diversity of human hydatidosis in bordering the Caspian Sea, northern Iran by focusing on Echinococcus granulosus sensu stricto complex. Iranian J Public Health 49(9):1758\u20131768","journal-title":"Iranian J Public Health"},{"key":"7811_CR102","doi-asserted-by":"publisher","first-page":"585","DOI":"10.1093\/genetics\/123.3.585","volume":"123","author":"F Tajima","year":"1989","unstructured":"Tajima F (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585\u2013595","journal-title":"Genetics"},{"key":"7811_CR103","doi-asserted-by":"publisher","first-page":"65","DOI":"10.1016\/bs.apar.2016.07.001","volume":"95","author":"RCA Thompson","year":"2017","unstructured":"Thompson RCA (2017) Biology and systematics of Echinococcus. Adv Parasitol 95:65\u2013109","journal-title":"Adv Parasitol"},{"key":"7811_CR104","unstructured":"Thompson RCA, McManus DP (2001) Aetiology: parasites and life-cycles. In: Eckert J, Gemmell M, Meslin F-X, Pawlowski Z (eds) WHOI\/OIE manual on echinococcosis in humans and animals: a public health problem of global concern. World Organization for Animal Health, 1\u201319"},{"key":"7811_CR105","volume":"214","author":"JH Wang","year":"2014","unstructured":"Wang JH, Wang N, Hu DD, Zhong XQ, Wang SX, Gu XB, Peng XR, Yang GY (2014) Genetic diversity of Echinococcus granulosus in southwest China determined by the mitochondrial NADH dehydrogenase subunit 2 gene. Sci World J 214:e867839","journal-title":"Sci World J"},{"key":"7811_CR106","doi-asserted-by":"publisher","first-page":"396","DOI":"10.3109\/19401736.2013.840590","volume":"26","author":"N Wang","year":"2015","unstructured":"Wang N, Wang JH, Hu DD, Zhong XQ, Jiang ZR, Yang A, Deng SJ, Guo L, Tsering D, Wang SX, Gu XB, Peng XR, Yang GY (2015) Genetic variability of Echinococcus granulosus based on the mitochondrial 16S ribosomal RNA gene. Mitochondrial DNA 26:396\u2013401","journal-title":"Mitochondrial DNA"},{"issue":"3","key":"7811_CR107","doi-asserted-by":"crossref","first-page":"1701","DOI":"10.3109\/19401736.2014.961129","volume":"27","author":"N Wang","year":"2016","unstructured":"Wang N, Xie Y, Liu TY, Zhong XQ, Wang JH, Hu DD, Wang SX, Gu XB, Peng XR, Yang GG (2016) The complete mitochondrial genome of G3 genotype of Echinococcus granulosus (Cestoda: Taeniidae). Mitochondrial DNA Part A 27(3):1701\u20131702","journal-title":"Mitochondrial DNA Part A"},{"key":"7811_CR108","doi-asserted-by":"publisher","first-page":"132","DOI":"10.1016\/j.atmosres.2017.07.001","volume":"197","author":"XH Wen","year":"2017","unstructured":"Wen XH, Wu XQ, Gao M (2017) Spatiotemporal variability of temperature and precipitation in Gansu Province (northwest China) during 1951\u20132015. Atmos Res 197:132\u2013149","journal-title":"Atmos Res"},{"key":"7811_CR109","doi-asserted-by":"publisher","first-page":"e00075","DOI":"10.1128\/CMR.00075-18","volume":"32","author":"H Wen","year":"2019","unstructured":"Wen H, Vuitton L, Tuxun TJ, Li J, Vuitton DA, Zhang WB, McManus DP (2019) Echinococcosis: advances in the 21st century. Clin Microbiol Rev 32:e00075-e118. https:\/\/doi.org\/10.1128\/CMR.00075-18","journal-title":"Clin Microbiol Rev"},{"key":"7811_CR110","unstructured":"WHO (2021) Echinococcosis. Fact sheet (Updated May 2021). World Health Organization. Available at https:\/\/www.who.int\/news-room\/fact-sheets\/detail\/echinococcosis. Last accessed on 08 Nov 2021"},{"issue":"1","key":"7811_CR111","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/s13071-017-2172-y","volume":"10","author":"CC Wu","year":"2017","unstructured":"Wu CC, Zhang WB, Ran B, Fan HN, Wang H, Guo BP, Zhou CL, Shao YM, Zhang W, Giraudoux P, Knapp J, Wen H, Kuang L, Li J (2017) Genetic variation of mitochondrial genes among Echinococcus multilocularis isolates collected in Western China. Parasit Vectors 10(1):1\u20137","journal-title":"Parasit Vectors"},{"issue":"1","key":"7811_CR112","first-page":"1","volume":"36","author":"WP Wu","year":"2018","unstructured":"Wu WP, Wang H, Wang Q, Zhou XN, Wang LY, Zheng CJ, Cao JP, Xiao N, Wang Y, Zhu YY, Niu YL, Xue CZ, Zeng XM, Fang Q, Han S, Yu Q, Yang SJ, Fu Q, Bai XF, Tian T, Li JJ, Zhang MY, Wu WT, Zhang SS, Hou YY, Feng Y, Ma X, Li B, Li FK, Guo WD, Yang YM, Wu XJ, Jin XJ, Zhang HW, Yu SC (2018a) A nationwide sampling survey on echinococcosis in China during 2012\u20132016. Chin J Parasitol Parasitic Dis 36(1):1\u201314","journal-title":"Chin J Parasitol Parasitic Dis"},{"key":"7811_CR113","doi-asserted-by":"publisher","first-page":"166","DOI":"10.1186\/s13071-018-2684-0","volume":"11","author":"YT Wu","year":"2018","unstructured":"Wu YT, Li L, Zhu GQ, Li WH, Zhang NZ, Li SN, Yao G, Tian WJ, Fu BQ, Yin H, Zhu XQ, Yan HB, Jia WZ (2018b) Mitochondrial genome data confirm that yaks can serve as the intermediate host of Echinococcus canadensis (G10) on the Tibetan Plateau. Parasit Vectors 11:166","journal-title":"Parasit Vectors"},{"key":"7811_CR114","doi-asserted-by":"publisher","unstructured":"Xia CY, Liu JZ, Tsering D, Yuan ZJ, Gesang D, Ban D (2014) Investigation of three finds of tapeworm larvae infections in Tibetan domestic animals. Chin Vet Sci 44:1205\u20131209. https:\/\/doi.org\/10.16656\/j.issn.1673-4696.2014.11.017 (In Chinese)","DOI":"10.16656\/j.issn.1673-4696.2014.11.017"},{"key":"7811_CR115","doi-asserted-by":"publisher","first-page":"693","DOI":"10.1016\/j.ijpara.2005.01.003","volume":"35","author":"N Xiao","year":"2005","unstructured":"Xiao N, Qiu JM, Nakao M, Li TY, Yang W, Chen XW, Schantz PM, Craig PS, Ito A (2005) Echinococcus shiquicus n. sp., a taeniid cestode from Tibetan fox and plateau pika in China. Int J Parasitol 35:693\u2013701","journal-title":"Int J Parasitol"},{"issue":"1\u20132","key":"7811_CR116","doi-asserted-by":"publisher","first-page":"179","DOI":"10.1016\/j.vetpar.2013.02.010","volume":"196","author":"N Yan","year":"2013","unstructured":"Yan N, Nie HM, Jiang ZR, Yang AG, Deng SJ, Guo L, Yu H, Yan YB, Tsering D, Kong WS, Wang N, Wang JH, Xie Y, Fu Y, Yang DY, Wang SX, Gu XB, Peng XR, Yang GY (2013) Genetic variability of Echinococcus granulosus from the Tibetan plateau inferred by mitochondrial DNA sequences. Vet Parasitol 196(1\u20132):179\u2013183","journal-title":"Vet Parasitol"},{"issue":"4","key":"7811_CR117","doi-asserted-by":"publisher","first-page":"391","DOI":"10.3347\/kjp.2018.56.4.391","volume":"56","author":"B Yan","year":"2018","unstructured":"Yan B, Liu XF, Wu JY, Zhao SS, Yuan WM, Wang BJ, Wureli H, Tu CC, Chen CF, Wang YZ (2018) Genetic diversity of Echinococcus granulosus genotype G1 in Xinjiang, northwest of China. Korean J Parasitol 56(4):391\u2013396","journal-title":"Korean J Parasitol"},{"issue":"7","key":"7811_CR118","doi-asserted-by":"publisher","first-page":"879","DOI":"10.1017\/S0031182021000512","volume":"148","author":"HB Yan","year":"2021","unstructured":"Yan HB, Li L, Li WH, Zhu GQ, Li JQ, Wu YT, Zhang NZ, Wu YD, Li M, Zhang LS, Yao G, Tian WJ, Li L, Li WJ, Guo AM, Dai GD, Fu AQ, Ohiolei JA, Jia WZ (2021) Echinococcus shiquicus in Qinghai-Tibet plateau: population structure and confirmation of additional endemic areas. Parasitology 148(7):879\u2013886","journal-title":"Parasitology"},{"issue":"4","key":"7811_CR119","doi-asserted-by":"publisher","first-page":"547","DOI":"10.1017\/S0031182005007973","volume":"131","author":"YR Yang","year":"2005","unstructured":"Yang YR, Rosenzvit MC, Zhang LH, Zhang JZ, McManus DP (2005) Molecular study of Echinococcus in west-Central China. Parasitology 131(4):547\u2013555. https:\/\/doi.org\/10.1017\/S0031182005007973","journal-title":"Parasitology"},{"issue":"1","key":"7811_CR120","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/1756-3305-5-146","volume":"5","author":"YR Yang","year":"2012","unstructured":"Yang YR, Clements ACA, Gray DJ, Atkinson JAM, Williams GM, Barnes TS, McManus DP (2012) Impact of anthropogenic and natural environmental changes on Echinococcus transmission in Ningxia Hui Autonomous Region, the People\u2019s Republic of China. Parasit Vectors 5(1):1\u20139","journal-title":"Parasit Vectors"},{"key":"7811_CR121","doi-asserted-by":"publisher","first-page":"355","DOI":"10.3347\/kjp.2015.53.3.355","volume":"53","author":"SJ Yang","year":"2015","unstructured":"Yang SJ, Wu WP, Tian T, Zhao JS, Chen K, Wang QY, Feng Z (2015) Prevalence of cystic echinococcosis in slaughtered sheep as an indicator to assess control progress in Emin County, Xinjiang, China. Korean J Parasitol 53:355\u2013359. https:\/\/doi.org\/10.3347\/kjp.2015.53.3.355","journal-title":"Korean J Parasitol"},{"issue":"3","key":"7811_CR122","doi-asserted-by":"publisher","first-page":"242","DOI":"10.7883\/yoken.JJID.2008.242","volume":"61","author":"SH Yu","year":"2008","unstructured":"Yu SH, Wang H, Wu XH, Ma X, Liu PY, Liu YF, Zhao YM, Morishima Y, Kawanaka M (2008) Cystic and alveolar echinococcosis: an epidemiological survey in a Tibetan population in southeast Qinghai, China. Jpn J Infect Dis 61(3):242\u2013246","journal-title":"Jpn J Infect Dis"},{"key":"7811_CR123","unstructured":"Zhang KF, Wu TJ, Zhao ZY (2014) Analysis of surveillance results of Hydatid disease in Minle County from 2009 to 2010. Fifth cross strait (Qinghai) featured agr. industrialization forum 18, 258\u2013260. (In Chinese)"},{"issue":"1","key":"7811_CR124","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/s13071-022-05199-6","volume":"15","author":"YP Zhao","year":"2022","unstructured":"Zhao YP, Gesang DZ, Wan L, Li JD, Qiangba G, Danzeng WM, Basang ZG, Renzhen N, Yin JF, Gongsang QZ, Cai HM, Pang HS, Wang DX, Asan, Zhang QD, Li JH, Chen WJ (2022) Echinococcus spp. and genotypes infecting humans in Tibet Autonomous Region of China: a molecular investigation with near-complete\/complete mitochondrial sequences. Parasit Vectors 15(1):1\u201314","journal-title":"Parasit Vectors"},{"key":"7811_CR125","unstructured":"Zhao YM (2008) Epidemiological study on Hydatid disease in the eastern section of the Qinghai-Tibet Plateau (Gannan Tibetan Autonomous Prefecture). Gansu Agr Univ 1\u201398. (In Chinese)"},{"key":"7811_CR126","doi-asserted-by":"publisher","first-page":"205","DOI":"10.3347\/kjp.2014.52.2.205","volume":"52","author":"XQ Zhong","year":"2014","unstructured":"Zhong XQ, Wang N, Hu DD, Wang JH, Liu TY, Gu XB, Wang SX, Peng XR, Yang GG (2014) Sequence analysis of cytb gene in Echinococcus granulosus from Western China. Korean J Parasitol 52:205\u2013209","journal-title":"Korean J Parasitol"},{"issue":"1","key":"7811_CR127","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/s13071-020-04456-w","volume":"13","author":"GQ Zhu","year":"2020","unstructured":"Zhu GQ, Yan HB, Li L, Ohiolei JA, Wu YT, Li WH, Zhang NZ, Fu BQ, Jia WZ (2020) First report on the phylogenetic relationship, genetic variation of Echinococcus shiquicus isolates in Tibet Autonomous Region, China. Parasit Vectors 13(1):1\u20138","journal-title":"Parasit Vectors"}],"container-title":["Parasitology Research"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00436-023-07811-9.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s00436-023-07811-9\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00436-023-07811-9.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,10,17]],"date-time":"2024-10-17T00:52:13Z","timestamp":1729126333000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s00436-023-07811-9"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,3,18]]},"references-count":127,"journal-issue":{"issue":"5","published-print":{"date-parts":[[2023,5]]}},"alternative-id":["7811"],"URL":"https:\/\/doi.org\/10.1007\/s00436-023-07811-9","relation":{},"ISSN":["0932-0113","1432-1955"],"issn-type":[{"value":"0932-0113","type":"print"},{"value":"1432-1955","type":"electronic"}],"subject":[],"published":{"date-parts":[[2023,3,18]]},"assertion":[{"value":"1 February 2023","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"1 March 2023","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"18 March 2023","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"Not applicable.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Ethics approval"}},{"value":"Not applicable.","order":3,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent to participate"}},{"value":"Not applicable.","order":4,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent for publication"}},{"value":"The authors declare no competing interests.","order":5,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}}]}}