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In contrast to the situation with arenaviruses, the presence of other viruses in <jats:italic>M. natalensis<\/jats:italic> remains largely unexplored. In this study, herpesviruses and polyomaviruses were identified and partially characterized by PCR methods, sequencing, and phylogenetic analysis. In tissues sampled from <jats:italic>M. natalensis<\/jats:italic> populations in C\u00f4te d<jats:italic>'<\/jats:italic>Ivoire and Mali, six new DNA viruses (four betaherpesviruses, one gammaherpesvirus and one polyomavirus) were identified. Phylogenetic analysis based on glycoprotein B amino acid sequences showed that the herpesviruses clustered with cytomegaloviruses and rhadinoviruses of multiple rodent species. The complete circular genome of the newly identified polyomavirus was amplified by PCR. Amino acid sequence analysis of the large T antigen or VP1 showed that this virus clustered with a known polyomavirus from a house mouse (species <jats:italic>Mus musculus polyomavirus 1<\/jats:italic>). These two polyomaviruses form a clade with other rodent polyomaviruses, and the newly identified virus represents the third known polyomavirus of <jats:italic>M. natalensis<\/jats:italic>. This study represents the first identification of herpesviruses and the discovery of a novel polyomavirus in <jats:italic>M. natalensis<\/jats:italic>. In contrast to arenaviruses, we anticipate that these newly identified viruses represent a low zoonotic risk due to the normally highly restricted specificity of members of these two DNA virus families to their individual mammalian host species.<\/jats:p>","DOI":"10.1007\/s00705-020-04738-9","type":"journal-article","created":{"date-parts":[[2020,8,4]],"date-time":"2020-08-04T20:02:22Z","timestamp":1596571342000},"page":"2291-2299","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":12,"title":["Multiple DNA viruses identified in multimammate mouse (Mastomys natalensis) populations from across regions of sub-Saharan Africa"],"prefix":"10.1007","volume":"165","author":[{"given":"S\u00e9bastien","family":"Calvignac-Spencer","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"L\u00e9once","family":"Kouadio","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Emmanuel","family":"Couacy-Hymann","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Nafomon","family":"Sogoba","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kyle","family":"Rosenke","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andrew J.","family":"Davison","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fabian","family":"Leendertz","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Michael A.","family":"Jarvis","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Heinz","family":"Feldmann","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8799-0454","authenticated-orcid":false,"given":"Bernhard","family":"Ehlers","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2020,8,4]]},"reference":[{"key":"4738_CR1","doi-asserted-by":"publisher","first-page":"685","DOI":"10.1093\/sysbio\/syr041","volume":"60","author":"M Anisimova","year":"2011","unstructured":"Anisimova M, Gil M, Dufayard JF, Dessimoz C, Gascuel O (2011) Survey of branch support methods demonstrates accuracy, power, and robustness of fast likelihood-based approximation schemes. 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Animal studies with <i>M. natalensis<\/i> from Mali were approved by the Institutional Animal Care and Use Committee of the Rocky Mountain Laboratories, Division of Intramural Research, NIAID, NIH under protocol number 2015-011. All procedures on live animals were conducted in compliance with the applicable institutional and national guidelines for use and handling of animals.","order":3,"name":"Ethics","group":{"name":"EthicsHeading","label":"Ethical approval"}}]}}