{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,2]],"date-time":"2026-09-02T00:53:45Z","timestamp":1788310425440,"version":"build-2803163510"},"reference-count":21,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2025,12,20]],"date-time":"2025-12-20T00:00:00Z","timestamp":1766188800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2025,12,20]],"date-time":"2025-12-20T00:00:00Z","timestamp":1766188800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"funder":[{"DOI":"10.13039\/100005825","name":"National Institute of Food and Agriculture","doi-asserted-by":"publisher","award":["Hatch Project 7005262"],"award-info":[{"award-number":["Hatch Project 7005262"]}],"id":[{"id":"10.13039\/100005825","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Scheetz-Chuey Foundation"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Arch Virol"],"published-print":{"date-parts":[[2026,1]]},"DOI":"10.1007\/s00705-025-06478-0","type":"journal-article","created":{"date-parts":[[2025,12,20]],"date-time":"2025-12-20T07:03:55Z","timestamp":1766214235000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":1,"title":["Genome sequence of dahlia mosaic virus revisited: molecular characterization and genetic diversity of DMV and dahlia common mosaic virus"],"prefix":"10.1007","volume":"171","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-8713-2991","authenticated-orcid":false,"given":"Prabu","family":"Gnanasekaran","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ying","family":"Zhai","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4370-8669","authenticated-orcid":false,"given":"Hanu R.","family":"Pappu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2025,12,20]]},"reference":[{"key":"6478_CR1","doi-asserted-by":"publisher","first-page":"140","DOI":"10.1007\/s11262-013-0997-9","volume":"48","author":"CV Almeyda","year":"2014","unstructured":"Almeyda CV, Eid SG, Saar D, Samuitiene M, Pappu HR (2014) Genetic diversity among endogenous plant pararetroviral sequences from geographically diverse sources of dahlia (Dahlia spp.). Virus Genes 48:140\u2013152","journal-title":"Virus Genes"},{"key":"6478_CR2","doi-asserted-by":"publisher","first-page":"357","DOI":"10.1111\/j.1744-7348.1971.tb02937.x","volume":"67","author":"AA Brunt","year":"1971","unstructured":"Brunt AA (1971) Some hosts and properties of dahlia mosaic virus. Annal Appl Biol 67:357\u2013368","journal-title":"Annal Appl Biol"},{"key":"6478_CR3","doi-asserted-by":"publisher","first-page":"13429","DOI":"10.1073\/pnas.93.23.13429","volume":"93","author":"B Efron","year":"1996","unstructured":"Efron B, Halloran E, Holmes S (1996) Bootstrap confidence levels for phylogenetic trees. Proc Natl Acad Sci U S A 93:13429\u201313434","journal-title":"Proc Natl Acad Sci U S A"},{"key":"6478_CR4","doi-asserted-by":"publisher","first-page":"153","DOI":"10.1007\/s11262-013-0998-8","volume":"48","author":"S Eid","year":"2014","unstructured":"Eid S, Pappu HR (2014) Expression of an endogenous para-retroviral genes and molecular analysis of the integration events in its plant host Dahlia variabilis. Virus Genes 48:153\u2013159","journal-title":"Virus Genes"},{"key":"6478_CR5","doi-asserted-by":"publisher","first-page":"378","DOI":"10.1111\/j.1365-3059.2010.02367.x","volume":"60","author":"S Eid","year":"2011","unstructured":"Eid S, Saar DE, Druffel KL, Pappu HR (2011) Plant para-retroviral sequences in wild Dahlia species in their natural habitats in Mexican mountain ranges. Plant Pathol 60:378\u2013383. https:\/\/doi.org\/10.1111\/j.1365-3059.2010.02367.x","journal-title":"Plant Pathol"},{"key":"6478_CR6","doi-asserted-by":"publisher","first-page":"2079","DOI":"10.1007\/s00705-011-1076-y","volume":"156","author":"S Eid","year":"2011","unstructured":"Eid S, Almeyda CV, Saar DE, Druffel KL, Pappu HR (2011) Genomic characterization of para-retroviral sequences in wild Dahlia spp. in natural habitats. Adv Virol 156:2079\u20132084. https:\/\/doi.org\/10.1007\/s00705-011-1076-y","journal-title":"Adv Virol"},{"key":"6478_CR7","doi-asserted-by":"publisher","first-page":"2325","DOI":"10.1007\/s00705-022-05567-8","volume":"167","author":"ADW Geering","year":"2022","unstructured":"Geering ADW, Mctaggart AR, Teycheney P-Y (2022) Untangling the taxonomy of dahlia mosaic virus. Arch Virol 167:2325\u20132329","journal-title":"Arch Virol"},{"key":"6478_CR8","doi-asserted-by":"publisher","first-page":"2297","DOI":"10.1007\/s00705-011-1112-y","volume":"156","author":"J Hadfield","year":"2011","unstructured":"Hadfield J, Linderme D, Shepherd DN, Bezuidenhout M, Lefeuvre P, Martin DP, Varsani A (2011) Complete genome sequence of a dahlia common mosaic virus isolate from New Zealand. Arch Virol 156:2297\u20132301","journal-title":"Arch Virol"},{"key":"6478_CR9","doi-asserted-by":"publisher","first-page":"68","DOI":"10.1093\/bioinformatics\/14.1.68","volume":"14","author":"DH Huson","year":"1998","unstructured":"Huson DH (1998) SplitsTree: analyzing and visualizing evolutionary data. Bioinformatics 14:68\u201373","journal-title":"Bioinformatics"},{"key":"6478_CR10","doi-asserted-by":"publisher","first-page":"msae263","DOI":"10.1093\/molbev\/msae263","volume":"41","author":"S Kumar","year":"2024","unstructured":"Kumar S, Stecher G, Suleski M, Sanderford M, Sharma S, Tamura K (2024) MEGA12: molecular evolutionary genetic analysis version 12 for adaptive and green computing. Mol Biol Evol 41:msae263","journal-title":"Mol Biol Evol"},{"key":"6478_CR11","doi-asserted-by":"publisher","first-page":"e108277","DOI":"10.1371\/journal.pone.0108277","volume":"9","author":"BM Muhire","year":"2014","unstructured":"Muhire BM, Varsani A, Martin DP (2014) SDT: a virus classification tool based on pairwise sequence alignment and identity calculation. PLoS One 9:e108277","journal-title":"PLoS One"},{"key":"6478_CR12","doi-asserted-by":"publisher","first-page":"945","DOI":"10.1094\/PDIS.2003.87.8.945","volume":"87","author":"M Nicolaisen","year":"2003","unstructured":"Nicolaisen M (2003) Partial molecular characterization of Dahlia mosaic virus and its detection by PCR. Plant Dis 87:945\u2013948","journal-title":"Plant Dis"},{"key":"6478_CR13","doi-asserted-by":"publisher","first-page":"733","DOI":"10.1007\/s00705-008-0043-8","volume":"153","author":"V Pahalawatta","year":"2008","unstructured":"Pahalawatta V, Druffel KL, Wyatt SD, Eastwell KC, Pappu HR (2008) Genome structure and organization of a member of a novel and distinct species of the genus Caulimovirus associated with dahlia mosaic. Arch Virol 153:733\u2013738","journal-title":"Arch Virol"},{"key":"6478_CR14","doi-asserted-by":"publisher","first-page":"2145","DOI":"10.1007\/s00705-008-0235-2","volume":"153","author":"HR Pappu","year":"2008","unstructured":"Pappu HR, Druffel KL, Miglino R, Van Schadewijk AR (2008) Nucleotide sequence and genome organization of a member of a new and distinct Caulimovirus species from dahlia. Arch Virol 153:2145\u20132148","journal-title":"Arch Virol"},{"key":"6478_CR15","doi-asserted-by":"publisher","first-page":"697","DOI":"10.21273\/HORTSCI.40.3.697","volume":"40","author":"HR Pappu","year":"2005","unstructured":"Pappu HR, Wyatt SD, Druffel KL (2005) Dahlia mosaic virus: molecular detection and distribution in Dahlia in the United States. HortScience 40:697\u2013699","journal-title":"HortScience"},{"key":"6478_CR16","doi-asserted-by":"publisher","first-page":"208","DOI":"10.1016\/0042-6822(83)90308-2","volume":"124","author":"RD Richins","year":"1983","unstructured":"Richins RD, Shepherd RJ (1983) Physical maps of the genomes of dahlia mosaic virus and mirabilis mosaic virus-two members of the caulimovirus group. Virology 124:208\u2013214","journal-title":"Virology"},{"key":"6478_CR17","doi-asserted-by":"publisher","first-page":"178","DOI":"10.1007\/s11105-014-0738-9","volume":"33","author":"DK Sahoo","year":"2015","unstructured":"Sahoo DK, Sarkar S, Raha S, Das NC, Banerjee J, Dey N, Maiti IB (2015) Analysis of Dahlia mosaic virus full-length transcript promoter-driven gene expression in transgenic plants. Plant Mol Biol Report 33:178\u2013199","journal-title":"Plant Mol Biol Report"},{"key":"6478_CR18","doi-asserted-by":"publisher","first-page":"1025","DOI":"10.1099\/jgv.0.001497","volume":"101","author":"PY Teycheney","year":"2020","unstructured":"Teycheney PY, Geering ADW, Dasgupta I, Hull R, Kreuze JF, Lockhart B, Muller E, Olszewski N, Pappu H, Pooggin MM, Richert-P\u00f6ggeler KR, Schoelz JE, Seal S, Stavolone L, Umber M, Report Consortium I (2020) ICTV virus taxonomy profile: caulimoviridae. J Gen Virol 101:1025\u20131026","journal-title":"J Gen Virol"},{"key":"6478_CR19","doi-asserted-by":"publisher","first-page":"1833","DOI":"10.3390\/genes14101833","volume":"14","author":"J Wang","year":"2023","unstructured":"Wang J, Zhou J, Chen M, Li Z, Song S (2023) Identification and genome characterization of a dahlia common mosaic virus isolate from China. Genes 14:1833. https:\/\/doi.org\/10.3390\/genes14101833","journal-title":"Genes"},{"key":"6478_CR20","doi-asserted-by":"publisher","first-page":"e85641","DOI":"10.1371\/journal.pone.0085641","volume":"9","author":"R Yasaka","year":"2014","unstructured":"Yasaka R, Nguyen HD, Ho SYW, Duch\u00eane S, Korkmaz S, Katis N, Takahashi H, Gibbs AJ, Ohshima K (2014) The temporal evolution and global spread of cauliflower mosaic virus, a plant pararetrovirus. PLOS One 9:e85641","journal-title":"PLOS One"},{"key":"6478_CR21","doi-asserted-by":"crossref","unstructured":"Zhai Y, Gnanasekaran P, Iftikhar R, Turner K, Van Tassel D, Cassetta E, Lubin T, Pappu HR (2024) Identification and molecular characterization of Dahlia common mosaic virus from Silphium spp., a new natural host of the virus. PhytoFrontiers\u2122, 0, PHYTOFR-12-23-0156-SC","DOI":"10.1094\/PHYTOFR-12-23-0156-SC"}],"container-title":["Archives of Virology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00705-025-06478-0.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s00705-025-06478-0","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00705-025-06478-0.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,1,24]],"date-time":"2026-01-24T09:10:42Z","timestamp":1769245842000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s00705-025-06478-0"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,12,20]]},"references-count":21,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2026,1]]}},"alternative-id":["6478"],"URL":"https:\/\/doi.org\/10.1007\/s00705-025-06478-0","relation":{},"ISSN":["0304-8608","1432-8798"],"issn-type":[{"value":"0304-8608","type":"print"},{"value":"1432-8798","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,12,20]]},"assertion":[{"value":"27 February 2025","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"10 October 2025","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"20 December 2025","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"The authors declare that there were no competing financial or nonfinancial interests while publishing this article.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Conflict of interest"}}],"article-number":"31"}}