{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,8]],"date-time":"2026-09-08T09:11:17Z","timestamp":1788858677892,"version":"build-2803163510"},"reference-count":27,"publisher":"Springer Science and Business Media LLC","issue":"9","license":[{"start":{"date-parts":[[2026,8,28]],"date-time":"2026-08-28T00:00:00Z","timestamp":1787875200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2026,8,28]],"date-time":"2026-08-28T00:00:00Z","timestamp":1787875200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Arch Virol"],"published-print":{"date-parts":[[2026,9]]},"DOI":"10.1007\/s00705-026-06719-w","type":"journal-article","created":{"date-parts":[[2026,8,28]],"date-time":"2026-08-28T09:30:45Z","timestamp":1787909445000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Genome characterization of two novel mitoviruses and a negative-sense single-stranded RNA mycovirus from the phytopathogenic fungus Clarireedia jacksonii"],"prefix":"10.1007","volume":"171","author":[{"given":"Kohei","family":"Sakuta","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tae","family":"Mabuchi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Syun-ichi","family":"Urayama","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Osamu","family":"Netsu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tsutomu","family":"Arie","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hiromitsu","family":"Moriyama","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ken","family":"Komatsu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2026,8,28]]},"reference":[{"key":"6719_CR1","doi-asserted-by":"publisher","first-page":"356","DOI":"10.1016\/j.virol.2015.02.034","volume":"479\u2013480","author":"SA Ghabrial","year":"2015","unstructured":"Ghabrial SA, Cast\u00f3n JR, Jiang D, Nibert ML, Suzuki N (2015) 50-plus years of fungal viruses. Virology 479\u2013480:356\u2013368. https:\/\/doi.org\/10.1016\/j.virol.2015.02.034","journal-title":"Virology"},{"key":"6719_CR2","doi-asserted-by":"publisher","first-page":"307","DOI":"10.1146\/annurev-phyto-021621-122122","volume":"60","author":"H Kondo","year":"2022","unstructured":"Kondo H, Botella L, Suzuki N (2022) Mycovirus diversity and evolution revealed\/inferred from recent studies. Annu Rev Phytopathol 60:307\u2013336. https:\/\/doi.org\/10.1146\/annurev-phyto-021621-122122","journal-title":"Annu Rev Phytopathol"},{"issue":"1","key":"6719_CR3","doi-asserted-by":"publisher","first-page":"115","DOI":"10.1111\/j.1364-3703.2008.00503.x","volume":"10","author":"MN Pearson","year":"2009","unstructured":"Pearson MN, Beever RE, Boine B, Arthur K (2009) Mycoviruses of filamentous fungi and their relevance to plant pathology. Mol Plant Pathol 10(1):115\u2013128. https:\/\/doi.org\/10.1111\/j.1364-3703.2008.00503.x","journal-title":"Mol Plant Pathol"},{"issue":"9","key":"6719_CR4","doi-asserted-by":"publisher","first-page":"fiz119","DOI":"10.1093\/femsec\/fiz119","volume":"95","author":"S Sutela","year":"2019","unstructured":"Sutela S, Poimala A, Vainio EJ (2019) Viruses of fungi and oomycetes in the soil environment. FEMS Microbiology Ecology 95(9):fiz119. https:\/\/doi.org\/10.1093\/femsec\/fiz119","journal-title":"FEMS Microbiology Ecology"},{"issue":"1","key":"6719_CR5","doi-asserted-by":"publisher","first-page":"595","DOI":"10.1146\/annurev-micro-041522-105358","volume":"78","author":"J Xie","year":"2024","unstructured":"Xie J, Jiang D (2024) Understanding the Diversity, Evolution, Ecology, and Applications of Mycoviruses. Annu Rev Microbiol 78(1):595\u2013620. https:\/\/doi.org\/10.1146\/annurev-micro-041522-105358","journal-title":"Annu Rev Microbiol"},{"key":"6719_CR6","doi-asserted-by":"publisher","unstructured":"Walker, P. J., Siddell, S. G., Lefkowitz, E. J., Mushegian, A. R., Adriaenssens, E. M., Alfenas-Zerbini, P., Davison, A. J., Dempsey, D. M., Dutilh, B. E., Garc\u00eda, M. L., Harrach, B., Harrison, R. L., Hendrickson, R. C., Junglen, S., Knowles, N. J., Krupovic, M., Kuhn, J. H., Lambert, A. J., \u0141obocka, M., . . . Zerbini, F. M. (2022). Recent changes to virus taxonomy ratified by the International Committee on Taxonomy of Viruses (2022). Archives of Virology, 167:2429\u20132440. https:\/\/doi.org\/10.1007\/s00705-022-05516-5","DOI":"10.1007\/s00705-022-05516-5"},{"key":"6719_CR7","doi-asserted-by":"publisher","first-page":"566","DOI":"10.1007\/BF00307850","volume":"256","author":"JJ Polashock","year":"1997","unstructured":"Polashock JJ, Bedker PJ, Hillman BI (1997) Movement of a small mitochondrial double-stranded RNA element of Cryphonectria parasitica: Ascospore inheritance and implications for mitochondrial recombination. Mol Gen Genet 256:566\u2013571. https:\/\/doi.org\/10.1007\/BF00307850","journal-title":"Mol Gen Genet"},{"issue":"18","key":"6719_CR8","doi-asserted-by":"publisher","first-page":"8680","DOI":"10.1073\/pnas.91.18.8680","volume":"91","author":"JJ Polashock","year":"1994","unstructured":"Polashock JJ, Hillman BI (1994) A small mitochondrial double-stranded (ds) RNA element associated with a hypovirulent strain of the chestnut blight fungus and ancestrally related to yeast cytoplasmic T and W dsRNAs. Proc Natl Acad Sci 91(18):8680\u20138684. https:\/\/doi.org\/10.1073\/pnas.91.18.8680","journal-title":"Proc Natl Acad Sci"},{"issue":"4","key":"6719_CR9","doi-asserted-by":"publisher","first-page":"911","DOI":"10.1111\/j.1469-8137.2008.02627.x","volume":"180","author":"P Xu","year":"2008","unstructured":"Xu P, Chen F, Mannas JP, Feldman T, Sumner LW, Roossinck MJ (2008) Virus infection improves drought tolerance. New Phytol 180(4):911\u2013921. https:\/\/doi.org\/10.1111\/j.1469-8137.2008.02627.x","journal-title":"New Phytol"},{"key":"6719_CR10","doi-asserted-by":"crossref","first-page":"48","DOI":"10.1007\/s00705-024-05987-8","volume":"169","author":"JH Kuhn","year":"2024","unstructured":"Kuhn JH, Adkins S, Agwanda BR et al (2024) 2023 taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales. Archives of Virology 169:48","journal-title":"Archives of Virology"},{"issue":"4","key":"6719_CR11","doi-asserted-by":"publisher","first-page":"927","DOI":"10.1007\/s00705-018-04127-3","volume":"164","author":"P Maes","year":"2019","unstructured":"Maes P, Alkhovsky SV, B\u00e0o Y, Beer M, Birkhead M, Briese T, Buchmeier MJ, Calisher CH, Charrel RN, Choi IR, Clegg CS, de la Torre JC, de Lamballerie X, Deng F, Derakhshan M, D\u2019halluin JC, Dolja VV, Drebot MA, D\u00fcrrwald R, Zerbini FM (2019) Taxonomy of the order Bunyavirales: Second update 2018. Archives of Virology 164(4):927\u2013941. https:\/\/doi.org\/10.1007\/s00705-018-04127-3","journal-title":"Archives of Virology"},{"key":"6719_CR12","doi-asserted-by":"publisher","first-page":"3513","DOI":"10.1007\/s00705-021-05143-6","volume":"166","author":"JH Kuhn","year":"2021","unstructured":"Kuhn JH, Adkins S, Agwanda BR, Al Kubrusli R, Alkhovsky SV, Amarasinghe GK, Ander M, Apanaskevich DA, Avsic-Zupanc T, Ayll\u00f3n MA, Bahl J, Balkema-Buschmann A, Ballinger MJ, Barker E, Basler CF, Bejerman N, Bertolotti L, Zerbini FM (2021) 2021 taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales. Adv Virol 166:3513\u20133566. https:\/\/doi.org\/10.1007\/s00705-021-05143-6","journal-title":"Adv Virol"},{"issue":"1","key":"6719_CR13","doi-asserted-by":"publisher","DOI":"10.1128\/jvi.01381-22","volume":"97","author":"H Huang","year":"2023","unstructured":"Huang H, Hua X, Pang X, Zhang Z, Ren J, Cheng J, Fu Y, Xiao X, Lin Y, Chen T, Li B, Liu H, Jiang D, Xie J (2023) Discovery and Characterization of Putative Glycoprotein-Encoding Mycoviruses in the Bunyavirales. J Virol 97(1):e0138122. https:\/\/doi.org\/10.1128\/jvi.01381-22","journal-title":"J Virol"},{"issue":"3","key":"6719_CR14","doi-asserted-by":"publisher","first-page":"691","DOI":"10.1094\/PDIS-06-20-1296-A","volume":"105","author":"JA Crouch","year":"2021","unstructured":"Crouch JA, Beirn LA, Boehm MJ, Carbone I, Clarke BB, Kerns JP, Malapi-Wight M, Mitchell TK, Venu RC, Tredway LP (2021) Genome resources for seven fungal isolates that cause dollar spot disease in turfgrass, including Clarireedia jacksonii and C. monteithiana. Plant Disease 105(3):691\u2013694. https:\/\/doi.org\/10.1094\/PDIS-06-20-1296-A","journal-title":"Plant Disease"},{"issue":"8","key":"6719_CR15","doi-asserted-by":"publisher","first-page":"761","DOI":"10.1016\/j.funbio.2018.04.004","volume":"122","author":"C Salgado-Salazar","year":"2018","unstructured":"Salgado-Salazar C, Beirn LA, Ismaiel A, Boehm MJ, Carbone I, Putman AI, Tredway LP, Clarke BB, Crouch JA (2018) Clarireedia: A new fungal genus comprising four pathogenic species responsible for dollar spot disease of turfgrass. Fungal Biol 122(8):761\u2013773. https:\/\/doi.org\/10.1016\/j.funbio.2018.04.004","journal-title":"Fungal Biol"},{"issue":"1","key":"6719_CR16","doi-asserted-by":"publisher","first-page":"6","DOI":"10.1080\/07060660409507107","volume":"26","author":"GJ Boland","year":"2004","unstructured":"Boland GJ (2004) Fungal viruses, hypovirulence, and biological control of Sclerotinia species. Can J Plant Path 26(1):6\u201318. https:\/\/doi.org\/10.1080\/07060660409507107","journal-title":"Can J Plant Path"},{"issue":"11","key":"6719_CR17","doi-asserted-by":"publisher","first-page":"1407","DOI":"10.1094\/PHYTO.2003.93.11.1407","volume":"93","author":"F Deng","year":"2003","unstructured":"Deng F, Xu R, Boland GJ (2003) Hypovirulence-associated double-stranded RNA from Sclerotinia homoeocarpa is conspecific with Ophiostoma novo-ulmi mitovirus 3a-Ld. Phytopathology 93(11):1407\u20131414. https:\/\/doi.org\/10.1094\/PHYTO.2003.93.11.1407","journal-title":"Phytopathology"},{"issue":"8","key":"6719_CR18","doi-asserted-by":"publisher","first-page":"788","DOI":"10.1094\/PHYTO.1998.88.8.788","volume":"88","author":"T Zhou","year":"1998","unstructured":"Zhou T, Boland GJ (1998) Suppression of Dollar Spot by Hypovirulent Isolates of Sclerotinia homoeocarpa. Phytopathology 88(8):788\u2013794. https:\/\/doi.org\/10.1094\/PHYTO.1998.88.8.788","journal-title":"Phytopathology"},{"issue":"8","key":"6719_CR19","doi-asserted-by":"publisher","first-page":"854","DOI":"10.1094\/Phyto-69-854","volume":"69","author":"TJ Morris","year":"1979","unstructured":"Morris TJ, Dodds JA (1979) Isolation and analysis of double-stranded RNA from virus-infected plant and fungal tissue. Phytopathology 69(8):854\u2013858. https:\/\/doi.org\/10.1094\/Phyto-69-854","journal-title":"Phytopathology"},{"key":"6719_CR20","doi-asserted-by":"publisher","first-page":"23","DOI":"10.1016\/j.virol.2018.03.014","volume":"519","author":"R Okada","year":"2018","unstructured":"Okada R, Ichinose S, Takeshita K, Urayama S-I, Fukuhara T, Komatsu K, Arie T, Ishihara A, Egusa M, Kodama M, Moriyama H (2018) Molecular characterization of a novel mycovirus in Alternaria alternata manifesting two-sided effects: Down-regulation of host growth and up-regulation of host plant pathogenicity. Virology 519:23\u201332. https:\/\/doi.org\/10.1016\/j.virol.2018.03.014","journal-title":"Virology"},{"issue":"6","key":"6719_CR21","doi-asserted-by":"publisher","first-page":"1444","DOI":"10.1111\/1755-0998.12936","volume":"18","author":"S-I Urayama","year":"2018","unstructured":"Urayama S-I, Takaki Y, Nishi S, Yoshida-Takashima Y, Deguchi S, Takai K, Nunoura T (2018) Unveiling the RNA virosphere associated with marine microorganisms. Mol Ecol Resour 18(6):1444\u20131455. https:\/\/doi.org\/10.1111\/1755-0998.12936","journal-title":"Mol Ecol Resour"},{"issue":"2","key":"6719_CR22","doi-asserted-by":"publisher","first-page":"ME20152","DOI":"10.1264\/jsme2.ME20152","volume":"36","author":"M Hirai","year":"2021","unstructured":"Hirai M, Takaki Y, Kondo F, Horie M, Urayama SI, Nunoura T (2021) RNA viral metagenome analysis of subnanogram dsRNA using fragmented and primer ligated dsRNA sequencing (FLDS). Microbes and Environments 36(2):ME20152. https:\/\/doi.org\/10.1264\/jsme2.ME20152","journal-title":"Microbes and Environments"},{"key":"6719_CR23","doi-asserted-by":"publisher","first-page":"421","DOI":"10.1186\/1471-2105-10-421","volume":"10","author":"C Camacho","year":"2009","unstructured":"Camacho C, Coulouris G, Avagyan V, Ma N, Papadopoulos J, Bealer K, Madden TL (2009) BLAST+: Architecture and applications. BMC Bioinformatics 10:421. https:\/\/doi.org\/10.1186\/1471-2105-10-421","journal-title":"BMC Bioinformatics"},{"issue":"4","key":"6719_CR24","doi-asserted-by":"publisher","first-page":"772","DOI":"10.1093\/molbev\/mst010","volume":"30","author":"K Katoh","year":"2013","unstructured":"Katoh K, Standley DM (2013) MAFFT multiple sequence alignment software version 7: Improvements in performance and usability. Mol Biol Evol 30(4):772\u2013780. https:\/\/doi.org\/10.1093\/molbev\/mst010","journal-title":"Mol Biol Evol"},{"issue":"15","key":"6719_CR25","doi-asserted-by":"publisher","first-page":"1972","DOI":"10.1093\/bioinformatics\/btp348","volume":"25","author":"S Capella-Guti\u00e9rrez","year":"2009","unstructured":"Capella-Guti\u00e9rrez S, Silla-Mart\u00ednez JM, Gabald\u00f3n T (2009) trimAl: A tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics 25(15):1972\u20131973. https:\/\/doi.org\/10.1093\/bioinformatics\/btp348","journal-title":"Bioinformatics"},{"issue":"5","key":"6719_CR26","doi-asserted-by":"publisher","first-page":"1530","DOI":"10.1093\/molbev\/msaa015","volume":"37","author":"BQ Minh","year":"2020","unstructured":"Minh BQ, Schmidt HA, Chernomor O, Schrempf D, Woodhams MD, von Haeseler A, Lanfear R (2020) IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era. Mol Biol Evol 37(5):1530\u20131534. https:\/\/doi.org\/10.1093\/molbev\/msaa015","journal-title":"Mol Biol Evol"},{"issue":"W1","key":"6719_CR27","doi-asserted-by":"publisher","first-page":"W293","DOI":"10.1093\/nar\/gkab301","volume":"49","author":"I Letunic","year":"2021","unstructured":"Letunic I, Bork P (2021) Interactive Tree of Life (iTOL) v5: An online tool for phylogenetic tree display and annotation. Nucleic Acids Res 49(W1):W293\u2013W296. https:\/\/doi.org\/10.1093\/nar\/gkab301","journal-title":"Nucleic Acids Res"}],"container-title":["Archives of Virology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00705-026-06719-w.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s00705-026-06719-w","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00705-026-06719-w.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,9,8]],"date-time":"2026-09-08T08:48:13Z","timestamp":1788857293000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s00705-026-06719-w"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,8,28]]},"references-count":27,"journal-issue":{"issue":"9","published-print":{"date-parts":[[2026,9]]}},"alternative-id":["6719"],"URL":"https:\/\/doi.org\/10.1007\/s00705-026-06719-w","relation":{},"ISSN":["0304-8608","1432-8798"],"issn-type":[{"value":"0304-8608","type":"print"},{"value":"1432-8798","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,8,28]]},"assertion":[{"value":"26 April 2026","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"8 August 2026","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"28 August 2026","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"The authors declare that they have no conflict of interest.","order":1,"name":"Ethics","label":"Competing interest","group":{"name":"EthicsHeading","label":"Declarations"}}],"article-number":"258"}}