{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,15]],"date-time":"2026-10-15T18:44:56Z","timestamp":1792089896138,"version":"4.4.0"},"reference-count":24,"publisher":"Springer Science and Business Media LLC","issue":"10","license":[{"start":{"date-parts":[[2026,9,11]],"date-time":"2026-09-11T00:00:00Z","timestamp":1789084800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2026,9,11]],"date-time":"2026-09-11T00:00:00Z","timestamp":1789084800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Arch Virol"],"published-print":{"date-parts":[[2026,10]]},"DOI":"10.1007\/s00705-026-06725-y","type":"journal-article","created":{"date-parts":[[2026,9,11]],"date-time":"2026-09-11T15:40:33Z","timestamp":1789141233000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Molecular characterization and genome sequence analysis of Dichroa emaravirus, a putative novel member of the genus Emaravirus"],"prefix":"10.1007","volume":"171","author":[{"given":"Fangmei","family":"Xiao","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yuanjing","family":"Chen","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shengming","family":"Liu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xuehua","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Daihong","family":"Yu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lin","family":"Li","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yizhao","family":"Qu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yuan","family":"Su","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yonghong","family":"Yang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1186-7203","authenticated-orcid":false,"given":"Mingfu","family":"Zhao","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2026,9,11]]},"reference":[{"key":"6725_CR1","doi-asserted-by":"publisher","first-page":"2991","DOI":"10.1080\/23802359.2021.1975506","volume":"6","author":"W Zhuo","year":"2021","unstructured":"Zhuo W, Wang L, Zhu X et al (2021) Characterization of the first chloroplast genome of Hydrangea febrifuga and its phylogenetic analysis. Mitochondrial DNA B Resour 6:2991\u20132992. https:\/\/doi.org\/10.1080\/23802359.2021.1975506","journal-title":"Mitochondrial DNA B Resour"},{"key":"6725_CR2","doi-asserted-by":"publisher","first-page":"741","DOI":"10.12705\/644.6","volume":"64","author":"Y De Smet","year":"2015","unstructured":"De Smet Y, Granados Mendoza C, Wanke S et al (2015) Molecular phylogenetics and new (infra)generic classification to alleviate polyphyly in tribe Hydrangeeae (Cornales: Hydrangeaceae). Taxon 64:741\u2013753. https:\/\/doi.org\/10.12705\/644.6","journal-title":"Taxon"},{"key":"6725_CR3","doi-asserted-by":"publisher","first-page":"2040","DOI":"10.1021\/jm010448q","volume":"45","author":"T Ishizuka","year":"2002","unstructured":"Ishizuka T et al (2002) Potent antimalarial febrifugine analogues against the Plasmodium malaria parasite. J Med Chem 45:2040\u20132045. https:\/\/doi.org\/10.1021\/jm010448q","journal-title":"J Med Chem"},{"key":"6725_CR4","doi-asserted-by":"publisher","first-page":"001943","DOI":"10.1099\/jgv.0.001943","volume":"105","author":"M Digiaro","year":"2024","unstructured":"Digiaro M, Elbeaino T, Kubota K et al (2024) ICTV virus taxonomy profile: Fimoviridae 2024. J Gen Virol 105:001943. https:\/\/doi.org\/10.1099\/jgv.0.001943","journal-title":"J Gen Virol"},{"key":"6725_CR5","doi-asserted-by":"publisher","first-page":"1515","DOI":"10.3390\/v4091515","volume":"4","author":"N Mielke-Ehret","year":"2012","unstructured":"Mielke-Ehret N, M\u00fchlbach HP (2012) Emaravirus: a novel genus of multipartite, negative strand RNA plant viruses. Viruses 4:1515\u20131536. https:\/\/doi.org\/10.3390\/v4091515","journal-title":"Viruses"},{"key":"6725_CR6","doi-asserted-by":"publisher","first-page":"11834","DOI":"10.1128\/JVI.01901-14","volume":"88","author":"S Tatineni","year":"2014","unstructured":"Tatineni S, McMechan AJ, Hein GL et al (2014) An eriophyid mite-transmitted plant virus contains eight genomic RNA segments with unusual heterogeneity in the nucleocapsid protein. J Virol 88:11834\u201311845. https:\/\/doi.org\/10.1128\/JVI.01901-14","journal-title":"J Virol"},{"key":"6725_CR7","doi-asserted-by":"publisher","first-page":"219","DOI":"10.1007\/s00705-025-06424-0","volume":"170","author":"R Bester","year":"2025","unstructured":"Bester R, Gill C, Breytenbach JHJ et al (2025) Molecular characterisation of a novel citrus-infecting emaravirus, citrus emaravirus 1. Arch Virol 170:219. https:\/\/doi.org\/10.1007\/s00705-025-06424-0","journal-title":"Arch Virol"},{"key":"6725_CR8","doi-asserted-by":"publisher","first-page":"1297","DOI":"10.1094\/PDIS.2002.86.12.1297","volume":"86","author":"NK Kulkarni","year":"2002","unstructured":"Kulkarni NK, Kumar PL, Muniyappa V et al (2002) Transmission of Pigeonpea sterility mosaic virus by the eriophyid mite, Aceria cajani (Acari: Arthropoda). Plant Dis 86:1297\u20131302. https:\/\/doi.org\/10.1094\/PDIS.2002.86.12.1297","journal-title":"Plant Dis"},{"key":"6725_CR9","doi-asserted-by":"publisher","first-page":"716","DOI":"10.1094\/PHYTO-07-18-0257-RVW","volume":"109","author":"DEV Villamor","year":"2019","unstructured":"Villamor DEV, Ho T, Al Rwahnih M et al (2019) High throughput sequencing for plant virus detection and discovery. Phytopathology 109:716\u2013725. https:\/\/doi.org\/10.1094\/PHYTO-07-18-0257-RVW","journal-title":"Phytopathology"},{"key":"6725_CR10","doi-asserted-by":"publisher","first-page":"1494","DOI":"10.1038\/nprot.2013.084","volume":"8","author":"BJ Haas","year":"2013","unstructured":"Haas BJ, Papanicolaou A, Yassour M et al (2013) De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis. Nat Protoc 8:1494\u20131512. https:\/\/doi.org\/10.1038\/nprot.2013.084","journal-title":"Nat Protoc"},{"key":"6725_CR11","doi-asserted-by":"publisher","first-page":"8998","DOI":"10.1073\/pnas.85.23.8998","volume":"85","author":"MA Frohman","year":"1988","unstructured":"Frohman MA, Dush MK, Martin GR (1988) Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer. Proc Natl Acad Sci U S A 85:8998\u20139002. https:\/\/doi.org\/10.1073\/pnas.85.23.8998","journal-title":"Proc Natl Acad Sci U S A"},{"key":"6725_CR12","doi-asserted-by":"publisher","first-page":"772","DOI":"10.1093\/molbev\/mst010","volume":"30","author":"K Katoh","year":"2013","unstructured":"Katoh K, Standley DM (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30:772\u2013780. https:\/\/doi.org\/10.1093\/molbev\/mst010","journal-title":"Mol Biol Evol"},{"key":"6725_CR13","doi-asserted-by":"publisher","first-page":"1972","DOI":"10.1093\/bioinformatics\/btp348","volume":"25","author":"S Capella-Guti\u00e9rrez","year":"2009","unstructured":"Capella-Guti\u00e9rrez S, Silla-Mart\u00ednez JM, Gabald\u00f3n T (2009) trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics 25:1972\u20131973. https:\/\/doi.org\/10.1093\/bioinformatics\/btp348","journal-title":"Bioinformatics"},{"key":"6725_CR14","doi-asserted-by":"publisher","first-page":"1530","DOI":"10.1093\/molbev\/msaa015","volume":"37","author":"BQ Minh","year":"2020","unstructured":"Minh BQ, Schmidt HA, Chernomor O et al (2020) IQ-TREE 2: new models and efficient methods for phylogenetic inference in the genomic era. Mol Biol Evol 37:1530\u20131534. https:\/\/doi.org\/10.1093\/molbev\/msaa015","journal-title":"Mol Biol Evol"},{"key":"6725_CR15","doi-asserted-by":"publisher","first-page":"587","DOI":"10.1038\/nmeth.4285","volume":"14","author":"S Kalyaanamoorthy","year":"2017","unstructured":"Kalyaanamoorthy S, Minh BQ, Wong TKF et al (2017) ModelFinder: fast model selection for accurate phylogenetic estimates. Nat Methods 14:587\u2013589. https:\/\/doi.org\/10.1038\/nmeth.4285","journal-title":"Nat Methods"},{"key":"6725_CR16","doi-asserted-by":"publisher","first-page":"518","DOI":"10.1093\/molbev\/msx281","volume":"35","author":"DT Hoang","year":"2018","unstructured":"Hoang DT, Chernomor O, von Haeseler A et al (2018) UFBoot2: improving the ultrafast bootstrap approximation. Mol Biol Evol 35:518\u2013522. https:\/\/doi.org\/10.1093\/molbev\/msx281","journal-title":"Mol Biol Evol"},{"key":"6725_CR17","doi-asserted-by":"publisher","first-page":"113992","DOI":"10.1016\/j.jviromet.2020.113992","volume":"288","author":"K Kubota","year":"2021","unstructured":"Kubota K et al (2021) Novel degenerate primer sets for the detection and identification of emaraviruses reveal new chrysanthemum species. J Virol Methods 288:113992. https:\/\/doi.org\/10.1016\/j.jviromet.2020.113992","journal-title":"J Virol Methods"},{"key":"6725_CR18","doi-asserted-by":"publisher","first-page":"1267","DOI":"10.1016\/j.cell.2015.05.006","volume":"161","author":"P Gerlach","year":"2015","unstructured":"Gerlach P, Malet H, Cusack S et al (2015) Structural insights into bunyavirus replication and its regulation by the vRNA promoter. Cell 161:1267\u20131279. https:\/\/doi.org\/10.1016\/j.cell.2015.05.006","journal-title":"Cell"},{"key":"6725_CR19","doi-asserted-by":"publisher","first-page":"41","DOI":"10.1016\/j.virusres.2016.05.027","volume":"222","author":"PL Di Bello","year":"2016","unstructured":"Di Bello PL, Laney AG, Druciarek T et al (2016) A novel emaravirus is associated with redbud yellow ringspot disease. Virus Res 222:41\u201347. https:\/\/doi.org\/10.1016\/j.virusres.2016.05.027","journal-title":"Virus Res"},{"key":"6725_CR20","doi-asserted-by":"publisher","first-page":"2483","DOI":"10.1099\/vir.0.013540-0","volume":"90","author":"X Shi","year":"2009","unstructured":"Shi X, Goli J, Clark G et al (2009) Functional analysis of the Bunyamwera orthobunyavirus Gc glycoprotein. J Gen Virol 90:2483\u20132492. https:\/\/doi.org\/10.1099\/vir.0.013540-0","journal-title":"J Gen Virol"},{"key":"6725_CR21","doi-asserted-by":"publisher","first-page":"567","DOI":"10.1006\/jmbi.2000.4315","volume":"305","author":"A Krogh","year":"2001","unstructured":"Krogh A, Larsson B, von Heijne G et al (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J Mol Biol 305:567\u2013580. https:\/\/doi.org\/10.1006\/jmbi.2000.4315","journal-title":"J Mol Biol"},{"key":"6725_CR22","doi-asserted-by":"publisher","first-page":"e0501822","DOI":"10.1128\/spectrum.05018-22","volume":"11","author":"LS Izhaki-Tavor","year":"2023","unstructured":"Izhaki-Tavor LS, Yechezkel IG, Alter J, Dessau M (2023) RNA encapsulation mode and evolutionary insights from the crystal structure of emaravirus nucleoprotein. Microbiol Spectr 11:e0501822. https:\/\/doi.org\/10.1128\/spectrum.05018-22","journal-title":"Microbiol Spectr"},{"key":"6725_CR23","doi-asserted-by":"publisher","first-page":"1868","DOI":"10.3390\/f13111868","volume":"13","author":"M Rehanek","year":"2022","unstructured":"Rehanek M, Karlin DG, Bandte M, Al Kubrusli R, Nourinejhad Zarghani S, Candresse T, B\u00fcttner C, von Bargen S (2022) The complex world of emaraviruses\u2014challenges, insights, and prospects. Forests 13:1868. https:\/\/doi.org\/10.3390\/f13111868","journal-title":"Forests"},{"key":"6725_CR24","doi-asserted-by":"publisher","first-page":"126","DOI":"10.3390\/v17010126","volume":"17","author":"NB Ranabhat","year":"2025","unstructured":"Ranabhat NB, Fellers JP, Bruce MA, Rupp JLS (2025) High-throughput Oxford Nanopore sequencing unveils complex viral population in Kansas wheat: implications for sustainable virus management. Viruses 17:126. https:\/\/doi.org\/10.3390\/v17010126","journal-title":"Viruses"}],"container-title":["Archives of Virology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00705-026-06725-y.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s00705-026-06725-y","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s00705-026-06725-y.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,10,15]],"date-time":"2026-10-15T17:46:19Z","timestamp":1792086379000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s00705-026-06725-y"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,9,11]]},"references-count":24,"journal-issue":{"issue":"10","published-print":{"date-parts":[[2026,10]]}},"alternative-id":["6725"],"URL":"https:\/\/doi.org\/10.1007\/s00705-026-06725-y","relation":{},"ISSN":["0304-8608","1432-8798"],"issn-type":[{"value":"0304-8608","type":"print"},{"value":"1432-8798","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,9,11]]},"assertion":[{"value":"26 June 2026","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"12 August 2026","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"11 September 2026","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"The authors declare no competing interests.","order":1,"name":"Ethics","label":"Competing interests","group":{"name":"EthicsHeading","label":"Declarations"}}],"article-number":"273"}}