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For <jats:italic>Chlamydia trachomatis<\/jats:italic>, 26 (7.5%) of 347 samples were positive in the Alinity assay and 24 (6.9%) in the m2000 assay. Corresponding figures for <jats:italic>Neisseria gonorrhoeae<\/jats:italic> were 23 (6.6%) and 17 (4.9%). For <jats:italic>Mycoplasma genitalium<\/jats:italic>, 22 (7.9%) of 279 samples were positive in the Alinity assay and 18 (6.5%) in the m2000 assay, for which DNA extraction was performed on an m2000sp instrument combined with in-house real-time PCR. The Alinity assay has at least the same sensitivity as the m2000 assay. The specificity was evaluated by discrepancy analysis.<\/jats:p>","DOI":"10.1007\/s10096-020-04135-9","type":"journal-article","created":{"date-parts":[[2021,3,15]],"date-time":"2021-03-15T18:02:58Z","timestamp":1615831378000},"page":"2217-2220","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":22,"title":["Comparison between Abbott m2000 RealTime and Alinity m STI systems for detection of Chlamydia trachomatis, Neisseria gonorrhoeae, and Mycoplasma genitalium"],"prefix":"10.1007","volume":"40","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-8729-2306","authenticated-orcid":false,"given":"Bj\u00f6rn","family":"Herrmann","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Karin","family":"Malm","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2021,3,15]]},"reference":[{"key":"4135_CR1","doi-asserted-by":"publisher","first-page":"683","DOI":"10.1128\/jcm.42.2.683-692.2004","volume":"42","author":"JS Jensen","year":"2004","unstructured":"Jensen JS, Bj\u00f6rnelius E, Dohn B, Lidbrink P (2004) Use of TaqMan 5' nuclease real-time PCR for quantitative detection of Mycoplasma genitalium DNA in males with and without urethritis who were attendees at a sexually transmitted disease clinic. 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