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This study focused on the detection of Influenza A viruses and diverse coronaviruses, including SARS-CoV-2, in domestic and wild animals, including bats, nonhuman primates, rodents, and marsupials. From August 2020 to September 2022, biological samples were collected from a total of 72 pets, 66 primates, 20 rodents, 36 marsupials, and 390 bats. Samples were tested using RT-PCR for Influenza A and coronaviruses, and positive samples were sequenced. When blood samples were available, they were tested for SARS-CoV-2 antibodies. All terrestrial animals were negative for evidence of infection with SARS-CoV-2 and Influenza A viruses. However, samples from 17 phyllostomid bats, including Great fruit-eating bat (<jats:italic>Artibeus lituratus<\/jats:italic>), Silky short-tailed bat (<jats:italic>Carollia brevicauda<\/jats:italic>), Seba's short-tailed bat (<jats:italic>Carollia perspicillata<\/jats:italic>), Common big-eared bat (<jats:italic>Micronycteris microtis<\/jats:italic>), Greater spear-nosed bat (<jats:italic>Phyllostomus hastatus<\/jats:italic>), White-lined broad-nosed bat (<jats:italic>Platyrrhinus lineatus<\/jats:italic>), Little yellow-shouldered bat (<jats:italic>Sturnira lilium<\/jats:italic>), Greater round-eared bat (<jats:italic>Tonatia bidens<\/jats:italic>), and Common vampire bat (<jats:italic>Desmodus rotundus<\/jats:italic>), were positive for bat coronaviruses classified as <jats:italic>Alphacoronavirus<\/jats:italic>. Our study adds new information on the occurrence of coronaviruses in bats and contributes to a long-term program of Influenza surveillance. Developing active surveillance for viruses in wildlife species, as implemented in this study, is crucial for understanding zoonotic risks and preventing future global pandemics.<\/jats:p>","DOI":"10.1007\/s10393-024-01691-w","type":"journal-article","created":{"date-parts":[[2025,2,4]],"date-time":"2025-02-04T21:13:50Z","timestamp":1738703630000},"page":"11-28","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":4,"title":["Cross-Species Surveillance of Respiratory Viruses in Domestic and Wild Mammals of an Urban Atlantic Forest from Brazil"],"prefix":"10.1007","volume":"22","author":[{"given":"Leonardo Corr\u00eaa","family":"da Silva Junior","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Deborah Fernandes","family":"Wailante","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marina Galvao","family":"Bueno","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Patricia Emilia Bento","family":"Moura","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alex","family":"Pauvolid-Corr\u00eaa","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Roberto Leonan Morim","family":"Novaes","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"S\u00f3crates Fraga","family":"da Costa-Neto","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Iuri","family":"Ver\u00edssimo","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Natasha Avila","family":"Bertocchi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ricardo","family":"Moratelli","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Rosana","family":"Gentile","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fernando Couto","family":"Motta","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mia Ferreira","family":"de Ara\u00fajo","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"David","family":"Brown","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Paola Cristina","family":"Resende","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marilda Agudo Mendon\u00e7a Teixeira","family":"de Siqueira","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9207-743X","authenticated-orcid":false,"given":"Maria","family":"Ogrzewalska","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2025,2,4]]},"reference":[{"key":"1691_CR1","doi-asserted-by":"publisher","first-page":"2593","DOI":"10.14202\/vetworld.2022.2593-2596","volume":"15","author":"RG Agopian","year":"2022","unstructured":"Agopian RG, da Luz SCG, Zebral AGB, de Sousa GF, de Oliveira IAV, Lima LS, Sechi MA, de Oliveira MC, Rudiniski VF, Brandespim DF, de Carvalho OV, Pettan-Brewer C, Dos Santos AP, Kmetiuk LB, Biondo AW (2022) First reported cases of SARS-CoV-2 infection in pets in Sao Paulo, Brazil. 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