{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,26]],"date-time":"2026-09-26T10:11:43Z","timestamp":1790417503300,"version":"4.1.0"},"reference-count":26,"publisher":"Springer Science and Business Media LLC","issue":"3","license":[{"start":{"date-parts":[[2009,5,16]],"date-time":"2009-05-16T00:00:00Z","timestamp":1242432000000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Antonie van Leeuwenhoek"],"published-print":{"date-parts":[[2009,10]]},"DOI":"10.1007\/s10482-009-9347-2","type":"journal-article","created":{"date-parts":[[2009,5,15]],"date-time":"2009-05-15T12:00:47Z","timestamp":1242388847000},"page":"303-312","source":"Crossref","is-referenced-by-count":24,"title":["Genotyping of Indian Yersinia pestis strains by MLVA and repetitive DNA sequence based PCRs"],"prefix":"10.1007","volume":"96","author":[{"given":"Joseph J.","family":"Kingston","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Urmil","family":"Tuteja","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Minakshi","family":"Kapil","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Harishchandra S.","family":"Murali","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Harsh V.","family":"Batra","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2009,5,16]]},"reference":[{"key":"9347_CR1","doi-asserted-by":"crossref","first-page":"17837","DOI":"10.1073\/pnas.0408026101","volume":"101","author":"M Achtman","year":"2004","unstructured":"Achtman M, Morelli G, Zhu P et al (2004) Microevolution and history of the plague bacillus, Yersinia pestis. Proc Natl Acad Sci USA 101:17837\u201317842. doi: 10.1073\/pnas.0408026101","journal-title":"Proc Natl Acad Sci USA"},{"key":"9347_CR2","doi-asserted-by":"crossref","first-page":"434","DOI":"10.1128\/CMR.17.2.434-464.2004","volume":"17","author":"AP Anisimov","year":"2004","unstructured":"Anisimov AP, Lindler LE, Pier GB (2004) Intraspecific diversity of Yersinia pestis. Clin Microbiol Rev 17:434\u2013464. doi: 10.1128\/CMR.17.2.434-464.2004","journal-title":"Clin Microbiol Rev"},{"key":"9347_CR3","first-page":"787","volume":"71","author":"HV Batra","year":"1996","unstructured":"Batra HV, Tuteja U, Agarwal GS (1996) Isolation and identification of Yersinia pestis responsible for the recent plague outbreaks in India. Curr Sci 71:787\u2013791","journal-title":"Curr Sci"},{"key":"9347_CR4","doi-asserted-by":"crossref","first-page":"4453","DOI":"10.1128\/JB.00124-06","volume":"188","author":"PS Chain","year":"2006","unstructured":"Chain PS, Hu P, Malfatti SA, Radnedge L, Larimer F, Vergez LM, Worsham P, Chu MC, Andersen GL (2006) Complete genome sequence of Yersinia pestis strains Antiqua and Nepal516: evidence of gene reduction in an emerging pathogen. J Bacteriol 188:4453\u20134463. doi: 10.1128\/JB.00124-06","journal-title":"J Bacteriol"},{"issue":"7","key":"9347_CR5","doi-asserted-by":"crossref","first-page":"e2652","DOI":"10.1371\/journal.pone.0002652","volume":"9;3","author":"Y Cui","year":"2008","unstructured":"Cui Y, Li Y, Gorg\u00e9 O et al (2008) Insight into microevolution of Yersinia pestis by clustered regularly interspaced short palindromic repeats. PLoS ONE 9;3(7):e2652","journal-title":"PLoS ONE"},{"key":"9347_CR6","doi-asserted-by":"crossref","first-page":"7945","DOI":"10.1128\/JB.187.23.7945-7954.2005","volume":"187","author":"E Gregorio De","year":"2005","unstructured":"De Gregorio E, Silvestro G, Petrillo M, Carlomagno MS, Di Nocera PP (2005) Enterobacterial repetitive intergenic consensus sequence repeats in yersiniae: genomic organization and functional properties. J Bacteriol 187:7945\u20137954. doi: 10.1128\/JB.187.23.7945-7954.2005","journal-title":"J Bacteriol"},{"key":"9347_CR7","doi-asserted-by":"crossref","first-page":"1585","DOI":"10.3201\/eid1009.030933","volume":"10","author":"M Drancourt","year":"2004","unstructured":"Drancourt M, Roux V, Dang LV, Tran-Hung L, Castex D, Chenal-Francisque V, Ogata H, Fournier PE, Crub\u00e9zy E, Raoult D (2004) Genotyping, orientalis-like Yersinia pestis, and plague pandemics. Emerg Infect Dis 10:1585\u20131592","journal-title":"Emerg Infect Dis"},{"key":"9347_CR8","first-page":"755","volume":"37","author":"AK Dutt","year":"2006","unstructured":"Dutt AK, Akhtar R, McVeigh M (2006) Review Surat plague of 1994 re-examined. Southeast Asian J Trop Med Public Health 37:755\u2013760","journal-title":"Southeast Asian J Trop Med Public Health"},{"key":"9347_CR9","doi-asserted-by":"crossref","first-page":"505","DOI":"10.1146\/annurev.ento.50.071803.130337","volume":"50","author":"KL Gage","year":"2005","unstructured":"Gage KL, Kosoy MY (2005) Natural history of plague: perspectives from more than a century of research. Annu Rev Entomol 50:505\u2013528. doi: 10.1146\/annurev.ento.50.071803.130337","journal-title":"Annu Rev Entomol"},{"key":"9347_CR10","doi-asserted-by":"crossref","first-page":"664","DOI":"10.3201\/eid1304.051105","volume":"13","author":"ML Gupta","year":"2007","unstructured":"Gupta ML, Sharma A (2007) Pneumonic plague, Northern India, 2002. Emerg Infect Dis 13:664\u2013666","journal-title":"Emerg Infect Dis"},{"key":"9347_CR11","doi-asserted-by":"crossref","first-page":"2928","DOI":"10.1128\/JB.182.10.2928-2936.2000","volume":"182","author":"P Keim","year":"2000","unstructured":"Keim P, Price LB, Klevytska AM, Smith KL, Schupp JM, Okinaka R, Jackson PJ, Hugh-Jones ME (2000) Multiple-locus variable-number tandem repeat analysis reveals genetic relationships within Bacillus anthracis. J Bacteriol 182:2928\u20132936. doi: 10.1128\/JB.182.10.2928-2936.2000","journal-title":"J Bacteriol"},{"key":"9347_CR12","doi-asserted-by":"crossref","first-page":"125","DOI":"10.1023\/A:1023301924932","volume":"83","author":"W Kim","year":"2003","unstructured":"Kim W, Song MO, Song W, Kim KJ, Chung SI, Choi CS, Park YH (2003) Comparison of 16S rDNA analysis and rep-PCR genomic fingerprinting for molecular identification of Yersinia pseudotuberculosis. Antonie Van Leeuwenhoek 83:125\u2013133. doi: 10.1023\/A:1023301924932","journal-title":"Antonie Van Leeuwenhoek"},{"key":"9347_CR13","doi-asserted-by":"crossref","first-page":"2","DOI":"10.1186\/1471-2180-1-2","volume":"1","author":"P Le Fl\u00e8che","year":"2001","unstructured":"Le Fl\u00e8che P, Hauck Y, Onteniente L, Prieur A, Denoeud F, Ramisse V, Sylvestre P, Benson G, Ramisse F, Vergnaud G (2001) A tandem repeats database for bacterial genomes: application to the genotyping of Yersinia pestis and Bacillus anthracis. BMC Microbiol 1:2. doi: 10.1186\/1471-2180-1-2","journal-title":"BMC Microbiol"},{"key":"9347_CR14","doi-asserted-by":"crossref","first-page":"37","DOI":"10.1186\/1471-2180-2-37","volume":"2","author":"P Le Fl\u00e8che","year":"2002","unstructured":"Le Fl\u00e8che P, Fabre M, Denoeud F, Koeck JL, Vergnaud G (2002) High resolution, on-line identification of strains from the Mycobacterium tuberculosis complex based on tandem repeat typing. BMC Microbiol 2:37. doi: 10.1186\/1471-2180-2-37","journal-title":"BMC Microbiol"},{"key":"9347_CR15","doi-asserted-by":"crossref","first-page":"650","DOI":"10.1128\/JCM.43.2.650-656.2005","volume":"43","author":"JL Lowell","year":"2005","unstructured":"Lowell JL, Wagner DM, Atshabar B, Antolin MF, Vogler AJ, Keim P, Chu MC, Gage KL (2005) Identifying sources of human exposure to plague. J Clin Microbiol 43:650\u2013656. doi: 10.1128\/JCM.43.2.650-656.2005","journal-title":"J Clin Microbiol"},{"key":"9347_CR16","doi-asserted-by":"crossref","first-page":"1019","DOI":"10.1128\/jb.184.4.1019-1027.2002","volume":"184","author":"VL Motin","year":"2002","unstructured":"Motin VL, Georgescu AM, Elliot JM et al (2002) Genetic variability of Yersinia pestis isolates as predicted by IS100 genotyping and analysis of structural genes encoding glycerol-3-phosphate dehydrogenase (glpD). J Bacteriol 184:1019\u20131027. doi: 10.1128\/jb.184.4.1019-1027.2002","journal-title":"J Bacteriol"},{"key":"9347_CR17","doi-asserted-by":"crossref","first-page":"35","DOI":"10.1128\/CMR.10.1.35","volume":"10","author":"RD Perry","year":"1997","unstructured":"Perry RD, Fetherston JD (1997) Yersinia pestis\u2014etiologic agent of plague. Clin Microbiol Rev 10:35\u201366","journal-title":"Clin Microbiol Rev"},{"key":"9347_CR18","doi-asserted-by":"crossref","first-page":"22","DOI":"10.1186\/1471-2180-4-22","volume":"4","author":"C Pourcel","year":"2004","unstructured":"Pourcel C, Andr\u00e9-Mazeaud F, Neubauer H, Ramisse F, Vergnaud G (2004) Tandem repeats analysis for the high-resolution phylogenetic analysis of Yersinia pestis. BMC Microbiol 4:22. doi: 10.1186\/1471-2180-4-22","journal-title":"BMC Microbiol"},{"key":"9347_CR19","doi-asserted-by":"crossref","first-page":"193","DOI":"10.1016\/j.femsle.2004.09.029","volume":"240","author":"P Sachdeva","year":"2004","unstructured":"Sachdeva P, Virdi JS (2004) Repetitive elements sequence (REP\/ERIC)-PCR based genotyping of clinical and environmental strains of Yersinia enterocolitica biotype 1A reveal existence of limited number of clonal groups. FEMS Microbiol Lett 240:193\u2013201. doi: 10.1016\/j.femsle.2004.09.029","journal-title":"FEMS Microbiol Lett"},{"key":"9347_CR20","doi-asserted-by":"crossref","first-page":"247","DOI":"10.1111\/j.1574-6968.2000.tb09238.x","volume":"189","author":"S Shivaji","year":"2000","unstructured":"Shivaji S, Bhanu NV, Aggarwal RK (2000) Identification of Yersinia pestis as the causative organism of plague in India as determined by 16S rDNA sequencing and RAPD-based genomic fingerprinting. FEMS Microbiol Lett 189:247\u2013252. doi: 10.1111\/j.1574-6968.2000.tb09238.x","journal-title":"FEMS Microbiol Lett"},{"key":"9347_CR21","doi-asserted-by":"crossref","first-page":"173","DOI":"10.1007\/s10482-005-3450-9","volume":"88","author":"M Tac\u00e3o","year":"2005","unstructured":"Tac\u00e3o M, Alves A, Saavedra MJ, Correia A (2005) BOX-PCR is an adequate tool for typing Aeromonas spp. Antonie Van Leeuwenhoek 88:173\u2013179. doi: 10.1007\/s10482-005-3450-9","journal-title":"Antonie Van Leeuwenhoek"},{"key":"9347_CR22","doi-asserted-by":"crossref","first-page":"2084","DOI":"10.1128\/JCM.02618-05","volume":"44","author":"G Torrea","year":"2006","unstructured":"Torrea G, Chenal-Francisque V, Leclercq A, Carniel E (2006) Efficient tracing of global isolates of Yersinia pestis by restriction fragment length polymorphism analysis using three insertion sequences as probes. J Clin Microbiol 44:2084\u20132092. doi: 10.1128\/JCM.02618-05","journal-title":"J Clin Microbiol"},{"key":"9347_CR23","doi-asserted-by":"crossref","first-page":"1176","DOI":"10.1128\/JCM.34.5.1176-1179.1996","volume":"34","author":"A Belkum van","year":"1996","unstructured":"van Belkum A, Sluijuter M, de Groot R, Verbrugh H, Hermans PW (1996) Novel BOX repeat PCR assay for high-resolution typing of Streptococcus pneumoniae strains. J Clin Microbiol 34:1176\u20131179","journal-title":"J Clin Microbiol"},{"key":"9347_CR24","doi-asserted-by":"crossref","first-page":"6823","DOI":"10.1093\/nar\/19.24.6823","volume":"9","author":"J Versalovic","year":"1991","unstructured":"Versalovic J, Koeuth T, Lupski JR (1991) Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucleic Acids Res 9:6823\u20136831. doi: 10.1093\/nar\/19.24.6823","journal-title":"Nucleic Acids Res"},{"key":"9347_CR25","doi-asserted-by":"crossref","first-page":"55","DOI":"10.1038\/nrmicro730","volume":"1","author":"BW Wren","year":"2003","unstructured":"Wren BW (2003) The yersiniae\u2014a model genus to study the rapid evolution of bacterial pathogens. Nat Rev Microbiol 1:55\u201364. doi: 10.1038\/nrmicro730","journal-title":"Nat Rev Microbiol"},{"key":"9347_CR26","doi-asserted-by":"crossref","first-page":"5138","DOI":"10.1128\/JB.186.15.5138-5146.2004","volume":"186","author":"D Zhou","year":"2004","unstructured":"Zhou D, Han Y, Song Y et al (2004) DNA microarray analysis of genome dynamics in Yersinia pestis: insights into bacterial genome microevolution and niche adaptation. J Bacteriol 186:5138\u20135146. doi: 10.1128\/JB.186.15.5138-5146.2004","journal-title":"J Bacteriol"}],"container-title":["Antonie van Leeuwenhoek"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s10482-009-9347-2.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1007\/s10482-009-9347-2\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s10482-009-9347-2","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,5,18]],"date-time":"2020-05-18T05:57:48Z","timestamp":1589781468000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/s10482-009-9347-2"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2009,5,16]]},"references-count":26,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2009,10]]}},"alternative-id":["9347"],"URL":"https:\/\/doi.org\/10.1007\/s10482-009-9347-2","relation":{},"ISSN":["0003-6072","1572-9699"],"issn-type":[{"value":"0003-6072","type":"print"},{"value":"1572-9699","type":"electronic"}],"subject":[],"published":{"date-parts":[[2009,5,16]]}}}