{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,8,2]],"date-time":"2025-08-02T18:28:13Z","timestamp":1754159293278,"version":"3.41.2"},"reference-count":20,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2025,5,1]],"date-time":"2025-05-01T00:00:00Z","timestamp":1746057600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2025,5,1]],"date-time":"2025-05-01T00:00:00Z","timestamp":1746057600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Bull Exp Biol Med"],"published-print":{"date-parts":[[2025,5]]},"DOI":"10.1007\/s10517-025-06432-9","type":"journal-article","created":{"date-parts":[[2025,7,18]],"date-time":"2025-07-18T07:40:52Z","timestamp":1752824452000},"page":"74-77","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Potential Markers for Thyroid Neoplasms in the Upstream Analysis of the Plasma Proteome"],"prefix":"10.1007","volume":"179","author":[{"given":"E. V.","family":"Bondarenko","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"I. O.","family":"Butenko","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"V. A.","family":"Ioutsi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"N. A.","family":"Kitsilovskaya","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"T. N.","family":"Aksenova","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"A. A.","family":"Lazareva","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"N. G.","family":"Mokrysheva","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2025,7,18]]},"reference":[{"key":"6432_CR1","unstructured":"Babajanov AS, Zayniev AF, Alimov JI. The current state of the problem of diagnosis of thyroid nodules (literature review). Journal of Biomedicine and Practice. 2022;7(4):379-86. Russian. https:\/\/doi.org\/10.5281\/zenodo.7030552"},{"issue":"9","key":"6432_CR2","doi-asserted-by":"publisher","first-page":"1039","DOI":"10.1089\/thy.2023.0141","volume":"33","author":"SZ Ali","year":"2023","unstructured":"Ali SZ, Baloch ZW, Cochand-Priollet B, et al. The 2023 Bethesda system for reporting thyroid cytopathology. Thyroid. 2023;33(9):1039-44. https:\/\/doi.org\/10.1089\/thy.2023.0141","journal-title":"Thyroid."},{"issue":"4","key":"6432_CR3","doi-asserted-by":"publisher","first-page":"220","DOI":"10.1067\/j.cpradiol.2017.06.009","volume":"47","author":"FM Medina Chamorro","year":"2018","unstructured":"Medina Chamorro FM, Calle JA, Stein JE, et al. Experience of the Implementation of rapid on-site evaluation in ultrasound-guided fine-needle aspiration biopsy of thyroid nodules. Curr Probl Diagn Radiol. 2018;47(4):220-4. https:\/\/doi.org\/10.1067\/j.cpradiol.2017.06.009","journal-title":"Curr Probl Diagn Radiol."},{"issue":"1","key":"6432_CR4","doi-asserted-by":"publisher","first-page":"48","DOI":"10.1186\/s12902-020-0530-9","volume":"20","author":"B Yaprak Bayrak","year":"2020","unstructured":"Yaprak Bayrak B, Eruyar AT. Malignancy rates for Bethesda III and IV thyroid nodules: a retrospective study of the correlation between fine-needle aspiration cytology and histopathology. BMC Endocr Disord. 2020;20(1):48. https:\/\/doi.org\/10.1186\/s12902-020-0530-9","journal-title":"BMC Endocr Disord."},{"issue":"1","key":"6432_CR5","doi-asserted-by":"publisher","first-page":"6","DOI":"10.1186\/s12953-023-00207-8","volume":"21","author":"W Wei","year":"2023","unstructured":"Wei W, Wu Y, Chen DD, et al. Proteomics profiling for the global and acetylated proteins of papillary thyroid cancers. Proteome Sci. 2023;21(1):6. https:\/\/doi.org\/10.1186\/s12953-023-00207-8","journal-title":"Proteome Sci."},{"issue":"5","key":"6432_CR6","doi-asserted-by":"publisher","first-page":"772","DOI":"10.1089\/thy.2020.0034","volume":"31","author":"YE Kang","year":"2021","unstructured":"Kang YE, Kim JM, Lim MA, et al. Growth differentiation factor 15 is a cancer cell-induced mitokine that primes thyroid cancer cells for invasiveness. Thyroid. 2021;31(5):772-86. https:\/\/doi.org\/10.1089\/thy.2020.0034","journal-title":"Thyroid."},{"issue":"6","key":"6432_CR7","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0198896","volume":"13","author":"Y Shi","year":"2018","unstructured":"Shi Y, Su C, Hu H, et al. Serum MMP-2 as a potential predictive marker for papillary thyroid carcinoma. PLoS One. 2018;13(6):e0198896. https:\/\/doi.org\/10.1371\/journal.pone.0198896","journal-title":"PLoS One."},{"issue":"1","key":"6432_CR8","first-page":"55","volume":"39","author":"S Palo","year":"2017","unstructured":"Palo S, Biligi DS. Differential diagnostic significance of HBME-1, CK19 and S100 in various thyroid lesions. Malays J Pathol. 2017;39(1):55-67.","journal-title":"Malays J Pathol."},{"issue":"1","key":"6432_CR9","doi-asserted-by":"publisher","first-page":"6","DOI":"10.1186\/s12014-024-09452-1","volume":"21","author":"D Wenk","year":"2024","unstructured":"Wenk D, Zuo C, Kislinger T, et al. Recent developments in mass-spectrometry-based targeted proteomics of clinical cancer biomarkers. Clin Proteomics. 2024;21(1):6. https:\/\/doi.org\/10.1186\/s12014-024-09452-1","journal-title":"Clin Proteomics."},{"key":"6432_CR10","doi-asserted-by":"publisher","first-page":"29","DOI":"10.1016\/j.clinms.2020.01.001","volume":"15","author":"CM Shuford","year":"2020","unstructured":"Shuford CM, Johnson JS, Thompson JW, et al. More sensitivity is always better: measuring sub-clinical levels of serum thyroglobulin on a \u03bcLC-MS\/MS system. Clin Mass Spectrom. 2020;15:29-35. https:\/\/doi.org\/10.1016\/j.clinms.2020.01.001","journal-title":"Clin Mass Spectrom."},{"key":"6432_CR11","doi-asserted-by":"publisher","unstructured":"Kontostathi G, Makridakis M, Bitsika V, et al. Development and validation of multiple reaction monitoring (MRM) assays for clinical applications. Proteomics for Biomarker Discovery. Springer. 2019;205-23. https:\/\/doi.org\/10.1007\/978-1-4939-9164-8_14","DOI":"10.1007\/978-1-4939-9164-8_14"},{"issue":"37","key":"6432_CR12","doi-asserted-by":"publisher","first-page":"13746","DOI":"10.1021\/acs.analchem.3c02269","volume":"95","author":"C Chiva","year":"2023","unstructured":"Chiva C, Elhamraoui Z, Sol\u00e9 A, et al. Assessment and prediction of human proteotypic peptide stability for proteomics quantification. Anal Chem. 2023;95(37):13746-9. https:\/\/doi.org\/10.1021\/acs.analchem.3c02269","journal-title":"Anal Chem."},{"issue":"2","key":"6432_CR13","doi-asserted-by":"publisher","first-page":"539","DOI":"10.1021\/acs.jproteome.2c00585","volume":"22","author":"BA Pauletti","year":"2023","unstructured":"Pauletti BA, Granato DC, Carnielli CM, et al. Typic: a practical and robust tool to rank proteotypic peptides for targeted proteomics. J Proteome Res. 2023;22(2):539-45. https:\/\/doi.org\/10.1021\/acs.jproteome.2c00585","journal-title":"J Proteome Res."},{"issue":"2","key":"6432_CR14","doi-asserted-by":"publisher","first-page":"226","DOI":"10.1002\/jms.2953","volume":"47","author":"L Sleno","year":"2012","unstructured":"Sleno L. The use of mass defect in modern mass spectrometry. J Mass Spectrom. 2012;47(2):226-36. https:\/\/doi.org\/10.1002\/jms.2953","journal-title":"J Mass Spectrom."},{"issue":"5","key":"6432_CR15","doi-asserted-by":"publisher","first-page":"513","DOI":"10.1038\/nmeth.4256","volume":"14","author":"AT Kong","year":"2017","unstructured":"Kong AT, Leprevost FV, Avtonomov DM, et al. MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry-based proteomics. Nat Methods. 2017;14(5):513-20. https:\/\/doi.org\/10.1038\/nmeth.4256","journal-title":"Nat Methods."},{"issue":"D1","key":"6432_CR16","doi-asserted-by":"publisher","first-page":"D328","DOI":"10.1093\/nar\/gkz995","volume":"48","author":"M Zahn-Zabal","year":"2020","unstructured":"Zahn-Zabal M, Michel PA, Gateau A, et al. The neXtProt knowledgebase in 2020: data, tools and usability improvements. Nucleic Acids Res. 2020;48(D1):D328-34. https:\/\/doi.org\/10.1093\/nar\/gkz995","journal-title":"Nucleic Acids Res."},{"issue":"3","key":"6432_CR17","doi-asserted-by":"publisher","first-page":"1376","DOI":"10.1021\/acs.jproteome.6b00115","volume":"16","author":"C Chiva","year":"2017","unstructured":"Chiva C, Sabid\u00f3 E. Peptide selection for targeted protein quantitation. J Proteome Res. 2017;16(3):1376-80. https:\/\/doi.org\/10.1021\/acs.jproteome.6b00115","journal-title":"J Proteome Res."},{"issue":"2","key":"6432_CR18","doi-asserted-by":"publisher","first-page":"190","DOI":"10.1038\/nbt.1524","volume":"27","author":"VA Fusaro","year":"2009","unstructured":"Fusaro VA, Mani DR, Mesirov JP, et al. Prediction of high-responding peptides for targeted protein assays by mass spectrometry. Nat Biotechnol. 2009;27(2):190-8. https:\/\/doi.org\/10.1038\/nbt.1524","journal-title":"Nat Biotechnol."},{"key":"6432_CR19","doi-asserted-by":"publisher","first-page":"151","DOI":"10.1016\/j.jprot.2014.04.018","volume":"106","author":"Y Mohammed","year":"2014","unstructured":"Mohammed Y, Doma\u0144ski D, Jackson AM, et al. PeptidePicker: a scientific workflow with web interface for selecting appropriate peptides for targeted proteomics experiments. J Proteomics. 2014;106:151-61. https:\/\/doi.org\/10.1016\/j.jprot.2014.04.018","journal-title":"J Proteomics."},{"issue":"22","key":"6432_CR20","doi-asserted-by":"publisher","first-page":"3797","DOI":"10.1021\/bi400110b","volume":"52","author":"DC Liebler","year":"2013","unstructured":"Liebler DC, Zimmerman LJ. Targeted quantitation of proteins by mass spectrometry. Biochemistry. 2013;52(22): 3797-806. https:\/\/doi.org\/10.1021\/bi400110b","journal-title":"Biochemistry."}],"container-title":["Bulletin of Experimental Biology and Medicine"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s10517-025-06432-9.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s10517-025-06432-9\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s10517-025-06432-9.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,7,25]],"date-time":"2025-07-25T05:06:27Z","timestamp":1753419987000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s10517-025-06432-9"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,5]]},"references-count":20,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2025,5]]}},"alternative-id":["6432"],"URL":"https:\/\/doi.org\/10.1007\/s10517-025-06432-9","relation":{},"ISSN":["0007-4888","1573-8221"],"issn-type":[{"value":"0007-4888","type":"print"},{"value":"1573-8221","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,5]]},"assertion":[{"value":"8 August 2024","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"18 July 2025","order":2,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}}]}}