{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,26]],"date-time":"2026-10-26T01:33:27Z","timestamp":1792978407055,"version":"4.5.0"},"reference-count":125,"publisher":"Springer Science and Business Media LLC","issue":"5","license":[{"start":{"date-parts":[[2026,9,14]],"date-time":"2026-09-14T00:00:00Z","timestamp":1789344000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0"},{"start":{"date-parts":[[2026,9,14]],"date-time":"2026-09-14T00:00:00Z","timestamp":1789344000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0"}],"funder":[{"name":"University of Southern Queensland","id":[{"id":"https:\/\/ror.org\/04sjbnx57","id-type":"ROR","asserted-by":"crossref"}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Biodegradation"],"published-print":{"date-parts":[[2026,10]]},"DOI":"10.1007\/s10532-026-10368-w","type":"journal-article","created":{"date-parts":[[2026,9,14]],"date-time":"2026-09-14T05:55:44Z","timestamp":1789365344000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":1,"title":["Microbial consortia for pesticide biodegradation: mechanisms, cross-class pathways, and translational challenges"],"prefix":"10.1007","volume":"37","author":[{"given":"Elango","family":"Lavanya","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Johnson","family":"Iruthayasamy","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Arunprakash","family":"Soodamani","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mareeswari","family":"Petchimuthu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Suganthi","family":"Angappan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kavitha","family":"Murugavel","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0816-4096","authenticated-orcid":false,"given":"Karthikeyan","family":"Muthusamy","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2026,9,14]]},"reference":[{"key":"10368_CR1","doi-asserted-by":"publisher","DOI":"10.3390\/ijms24098282","volume":"24","author":"M Ahmad","year":"2023","unstructured":"Ahmad M, Ling J, Yin J, Chen L, Yang Q, Zhou W, Zhang Y, Huang X, Khan I, Dong J (2023) Evaluation of the different nutritional and environmental parameters on microbial pyrene degradation by mangrove culturable bacteria. Int J Mol Sci 24:8282. https:\/\/doi.org\/10.3390\/ijms24098282","journal-title":"Int J Mol Sci"},{"issue":"1","key":"10368_CR2","doi-asserted-by":"publisher","first-page":"248","DOI":"10.1080\/21645698.2024.2381294","volume":"15","author":"J Ahmad","year":"2024","unstructured":"Ahmad J, Grunden A, Kuzma J (2024) Biotechnology executive order opens door for regulatory reform and social acceptance of genetically engineered microbes in agriculture. GM Crops Food 15(1):248\u2013261. https:\/\/doi.org\/10.1080\/21645698.2024.2381294","journal-title":"GM Crops Food"},{"issue":"11","key":"10368_CR3","doi-asserted-by":"publisher","DOI":"10.1007\/s10661-025-14666-3","volume":"197","author":"F Alavian","year":"2025","unstructured":"Alavian F, Khodabakhshi F (2025) Integrating artificial intelligence with microbial biotechnology for sustainable environmental remediation. Environ Monit Assess 197(11):1183","journal-title":"Environ Monit Assess"},{"key":"10368_CR4","doi-asserted-by":"publisher","first-page":"210","DOI":"10.1186\/s12934-024-02485-z","volume":"23","author":"F Alidoosti","year":"2024","unstructured":"Alidoosti F, Giyahchi M, Moien S, Moghimi H (2024) Unlocking the potential of soil microbial communities for bioremediation of emerging organic contaminants: omics-based approaches. Microb Cell Fact 23:210","journal-title":"Microb Cell Fact"},{"issue":"1","key":"10368_CR5","doi-asserted-by":"publisher","first-page":"84","DOI":"10.1007\/s44163-024-00198-1","volume":"4","author":"E Alotaibi","year":"2024","unstructured":"Alotaibi E, Nassif N (2024) Artificial intelligence in environmental monitoring: in-depth analysis. Discov Artific Intell 4(1):84","journal-title":"Discov Artific Intell"},{"issue":"2","key":"10368_CR6","doi-asserted-by":"publisher","DOI":"10.1007\/s10532-026-10276-z","volume":"37","author":"ZA Ansar","year":"2026","unstructured":"Ansar ZA, Alappat MM, Subramanian S, Anbarasu A (2026) Microbial and multi-omics approaches for bioremediation of emerging contaminants: environmental impact and future engineering solutions. Biodegradation 37(2):52. https:\/\/doi.org\/10.1007\/s10532-026-10276-z","journal-title":"Biodegradation"},{"key":"10368_CR7","doi-asserted-by":"publisher","first-page":"947","DOI":"10.22034\/gjesm.2026.02.23","volume":"12","author":"J Aravind","year":"2026","unstructured":"Aravind J, Nouri J, Tehrani SM (2026) Emerging artificial intelligence and machine learning paradigms in environmental pollution control and abatement. Glob J Environ Sci Manag 12:947\u2013966. https:\/\/doi.org\/10.22034\/gjesm.2026.02.23","journal-title":"Glob J Environ Sci Manag"},{"key":"10368_CR8","doi-asserted-by":"publisher","first-page":"31","DOI":"10.1186\/1475-2859-13-31","volume":"13","author":"PK Arora","year":"2014","unstructured":"Arora PK, Bae H (2014) Bacterial degradation of chlorophenols and their derivatives. Microb Cell Fact 13:31. https:\/\/doi.org\/10.1186\/1475-2859-13-31","journal-title":"Microb Cell Fact"},{"issue":"5","key":"10368_CR9","doi-asserted-by":"publisher","first-page":"4322","DOI":"10.1007\/s11356-015-4935-3","volume":"24","author":"M Arslan","year":"2017","unstructured":"Arslan M, Imran A, Khan QM, Afzal M (2017) Plant\u2013bacteria partnerships for the remediation of persistent organic pollutants. Environ Sci Pollut Res 24(5):4322\u20134336. https:\/\/doi.org\/10.1007\/s11356-015-4935-3","journal-title":"Environ Sci Pollut Res"},{"key":"10368_CR10","doi-asserted-by":"publisher","DOI":"10.1016\/j.jhazmat.2023.130847","volume":"447","author":"S Aslam","year":"2023","unstructured":"Aslam S, Jing Y, Nowak KM (2023) Fate of glyphosate and its degradation products AMPA, glycine and sarcosine in an agricultural soil: implications for environmental risk assessment. J Hazard Mater 447:130847. https:\/\/doi.org\/10.1016\/j.jhazmat.2023.130847","journal-title":"J Hazard Mater"},{"issue":"1","key":"10368_CR11","doi-asserted-by":"publisher","first-page":"29","DOI":"10.1007\/BF00695211","volume":"5","author":"NA Assaf","year":"1994","unstructured":"Assaf NA, Turco RF (1994) Accelerated biodegradation of atrazine by a microbial consortium is possible in culture and soil. Biodegradation 5(1):29\u201335. https:\/\/doi.org\/10.1007\/BF00695211","journal-title":"Biodegradation"},{"key":"10368_CR12","doi-asserted-by":"publisher","DOI":"10.1016\/j.chemosphere.2019.125507","volume":"244","author":"P Bhatt","year":"2021","unstructured":"Bhatt P, Bhatt K, Huang Y, Lin Z, Chen S (2021a) Esterase is a powerful tool for the biodegradation of pyrethroid insecticides. Chemosphere 244:125507. https:\/\/doi.org\/10.1016\/j.chemosphere.2019.125507","journal-title":"Chemosphere"},{"issue":"3","key":"10368_CR13","doi-asserted-by":"publisher","first-page":"317","DOI":"10.1080\/07388551.2020.1853032","volume":"41","author":"P Bhatt","year":"2021","unstructured":"Bhatt P, Verma A, Gangola S, Bhandari G, Zhang W, Maithani D, Huang Y (2021b) Biotechnological basis of microbial consortia for the removal of pesticides from the environment. Crit Rev Biotechnol 41(3):317\u2013338. https:\/\/doi.org\/10.1080\/07388551.2020.1853032","journal-title":"Crit Rev Biotechnol"},{"key":"10368_CR14","doi-asserted-by":"publisher","DOI":"10.1016\/j.biortech.2020.123845","volume":"315","author":"P Bhatt","year":"2022","unstructured":"Bhatt P, Rene ER, Kumar AJ, Bhatt K, Chen S (2022) Binding interaction of allethrin with esterase: bioremediation potential and mechanism of degradation. Bioresour Technol 315:123845. https:\/\/doi.org\/10.1016\/j.biortech.2020.123845","journal-title":"Bioresour Technol"},{"key":"10368_CR15","doi-asserted-by":"publisher","first-page":"18363","DOI":"10.1038\/s41598-019-54978-2","volume":"9","author":"L Billet","year":"2019","unstructured":"Billet L, Devers M, Rouard N, Martin-Laurent F, Spo A (2019) Labour sharing promotes coexistence in atrazine degrading bacterial communities. Sci Rep 9:18363. https:\/\/doi.org\/10.1038\/s41598-019-54978-2","journal-title":"Sci Rep"},{"key":"10368_CR16","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2025.1504254","volume":"16","author":"AA Blessing","year":"2025","unstructured":"Blessing AA, Olateru K (2025) AI-driven optimization of bioremediation strategies for river pollution: a comprehensive review and future directions. Front Microbiol 16:1504254. https:\/\/doi.org\/10.3389\/fmicb.2025.1504254","journal-title":"Front Microbiol"},{"issue":"4","key":"10368_CR17","doi-asserted-by":"publisher","first-page":"3209","DOI":"10.1007\/s10311-021-01236-5","volume":"19","author":"S Bose","year":"2021","unstructured":"Bose S, Kumar P, Vo D, Rajamohan N, Saravanan R (2021) Microbial degradation of recalcitrant pesticides: a review. Environ Chem Lett 19(4):3209\u20133228. https:\/\/doi.org\/10.1007\/s10311-021-01236-5","journal-title":"Environ Chem Lett"},{"key":"10368_CR18","doi-asserted-by":"publisher","DOI":"10.1016\/j.jhazmat.2022.12846","volume":"430","author":"L Cao","year":"2022","unstructured":"Cao L, Shi X, Li Y, Wang Y, Lu C, Huang X, Jin H (2022a) Microbial consortia for enhanced pesticide degradation: synthetic biology and ecological engineering approaches. J Hazard Mater 430:128461. https:\/\/doi.org\/10.1016\/j.jhazmat.2022.12846","journal-title":"J Hazard Mater"},{"key":"10368_CR19","doi-asserted-by":"publisher","DOI":"10.3389\/fbioe.2022.889212","volume":"10","author":"Z Cao","year":"2022","unstructured":"Cao Z, Wang J, Zhang H, Yang Y (2022b) Construction of microbial consortia for microbial degradation: principles and applications. Front Bioeng Biotechnol 10:889212. https:\/\/doi.org\/10.3389\/fbioe.2022.889212","journal-title":"Front Bioeng Biotechnol"},{"issue":"2","key":"10368_CR20","doi-asserted-by":"publisher","first-page":"48","DOI":"10.1002\/fes3.108","volume":"6","author":"FP Carvalho","year":"2017","unstructured":"Carvalho FP (2017) Pesticides, environment, and food safety. Food Energy Secur 6(2):48\u201360. https:\/\/doi.org\/10.1002\/fes3.108","journal-title":"Food Energy Secur"},{"issue":"1","key":"10368_CR21","doi-asserted-by":"publisher","first-page":"91","DOI":"10.1007\/s44274-025-00217-7","volume":"3","author":"S Chakraborty","year":"2025","unstructured":"Chakraborty S, Talukdar A, Dey S, Bhattacharya S (2025) Role of fungi, bacteria and microalgae in bioremediation of emerging pollutants with special reference to pesticides, heavy metals and pharmaceuticals. Discov Environ 3(1):91. https:\/\/doi.org\/10.1007\/s44274-025-00217-7","journal-title":"Discov Environ"},{"issue":"3","key":"10368_CR22","doi-asserted-by":"publisher","DOI":"10.3390\/agronomy13030643","volume":"13","author":"P Chaudhary","year":"2023","unstructured":"Chaudhary P, Xu M, Ahamad L, Chaudhary A, Kumar G, Adeleke BS, Verma KK, Hu D-M, \u0160iri\u0107 I, Kumar P, Popescu SM, Abou Fayssal S (2023) Application of synthetic consortia for improvement of soil fertility, pollution remediation, and agricultural productivity: a review. Agronomy 13(3):643. https:\/\/doi.org\/10.3390\/agronomy13030643","journal-title":"Agronomy"},{"key":"10368_CR23","doi-asserted-by":"publisher","DOI":"10.1016\/j.scitotenv.2024.173045","author":"S Chen","year":"2025","unstructured":"Chen S, Chen S-F, Liu M, Zhang W, Chen W-J, Bhatt P, Ghorab MA, Mishra S (2025) Complete biodegradation of glyphosate with microbial consortia: structural analysis, biochemical pathways, and environmental bioremediation. Sci Total Environ. https:\/\/doi.org\/10.1016\/j.scitotenv.2024.173045","journal-title":"Sci Total Environ"},{"issue":"2","key":"10368_CR24","doi-asserted-by":"publisher","first-page":"117","DOI":"10.1007\/s10532-023-10050-5","volume":"35","author":"D Chettri","year":"2024","unstructured":"Chettri D, Verma AK, Verma AK (2024) Bioaugmentation: an approach to biological treatment of pollutants. Biodegradation 35(2):117\u2013135. https:\/\/doi.org\/10.1007\/s10532-023-10050-5","journal-title":"Biodegradation"},{"issue":"5","key":"10368_CR25","doi-asserted-by":"publisher","first-page":"597","DOI":"10.1007\/s00449-024-02978-6","volume":"47","author":"XK Chia","year":"2024","unstructured":"Chia XK, Hadibarata T, Kristanti RA, Jusoh MNH, Tan IS, Foo HCY (2024) The function of microbial enzymes in breaking down soil contaminated with pesticides: a review. Bioprocess Biosyst Eng 47(5):597\u2013620. https:\/\/doi.org\/10.1007\/s00449-024-02978-6","journal-title":"Bioprocess Biosyst Eng"},{"issue":"2","key":"10368_CR26","doi-asserted-by":"publisher","first-page":"300","DOI":"10.1021\/acs.biochem.2c00249","volume":"62","author":"SD Copley","year":"2023","unstructured":"Copley SD, Newton MS, Widney KA (2023) How to recruit a promiscuous enzyme to serve a new function. Biochemistry 62(2):300\u2013308. https:\/\/doi.org\/10.1021\/acs.biochem.2c00249","journal-title":"Biochemistry"},{"key":"10368_CR27","doi-asserted-by":"publisher","DOI":"10.1016\/j.jenvman.2025.125892","volume":"361","author":"Y Dai","year":"2025","unstructured":"Dai Y, Xu M, Zhao N, Zhang H, Liu Y (2025) Biodegradation of acetochlor by microbial consortium AT1: microcosm-based microbiomic and metabolomic insights. J Environ Manage 361:125892. https:\/\/doi.org\/10.1016\/j.jenvman.2025.125892","journal-title":"J Environ Manage"},{"issue":"4","key":"10368_CR28","doi-asserted-by":"publisher","DOI":"10.3390\/soilsystems7040081","volume":"7","author":"MA Dar","year":"2023","unstructured":"Dar MA, Kaushik G (2023) Biodegradation of malathion in amended soil by indigenous novel bacterial consortia and analysis of degradation pathway. Soil Syst 7(4):81. https:\/\/doi.org\/10.3390\/soilsystems7040081","journal-title":"Soil Syst"},{"key":"10368_CR29","doi-asserted-by":"publisher","DOI":"10.1016\/j.hazadv.2026.101428","author":"MA Dar","year":"2026","unstructured":"Dar MA, Akkaya EK, Rizwan M (2026) Glyphosate in the environment: pollution dynamics, fate, microbial degradation and associated pathways. J Hazard Mater Adv. https:\/\/doi.org\/10.1016\/j.hazadv.2026.101428","journal-title":"J Hazard Mater Adv"},{"key":"10368_CR30","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.64.1.178-184.1998","author":"ML de Souza","year":"1998","unstructured":"de Souza ML, Newcombe D, Alvey S, Crowley DE, Hay A, Sadowsky MJ, Wackett LP (1998) Molecular basis of a bacterial consortium: interspecies catabolism of atrazine. Appl Environ Microbiol. https:\/\/doi.org\/10.1128\/AEM.64.1.178-184.1998","journal-title":"Appl Environ Microbiol"},{"key":"10368_CR31","doi-asserted-by":"publisher","DOI":"10.1016\/j.ibmed.2025.100251","volume":"11","author":"R Dhaarani","year":"2025","unstructured":"Dhaarani R, Reddy MK (2025) Progressing microbial genomics: artificial intelligence and deep learning driven advances in genome analysis and therapeutics. Intell Based Med 11:100251. https:\/\/doi.org\/10.1016\/j.ibmed.2025.100251","journal-title":"Intell Based Med"},{"issue":"12","key":"10368_CR32","doi-asserted-by":"publisher","DOI":"10.3390\/environments12120492","volume":"12","author":"G Dhakal","year":"2025","unstructured":"Dhakal G, Thapa Magar S, Fujino T (2025) Pesticide degradation by soil bacteria: mechanisms, bioremediation strategies, and implications for sustainable agriculture. Environments 12(12):492. https:\/\/doi.org\/10.3390\/environments12120492","journal-title":"Environments"},{"key":"10368_CR33","unstructured":"DPR (2024) Risk characterization document for the non-agricultural uses of imidacloprid. Human health assessment branch, Department of Pesticide Regulation, California Environmental Protection Agency, Sacramento, CA"},{"key":"10368_CR34","doi-asserted-by":"publisher","DOI":"10.1023\/a:1014377912147","author":"E Efremenko","year":"2001","unstructured":"Efremenko E, Sergeeva V (2001) Organophosphate hydrolase\u2014an enzyme catalyzing degradation of phosphorus-containing toxins and pesticides. Russ Chem Bull. https:\/\/doi.org\/10.1023\/a:1014377912147","journal-title":"Russ Chem Bull"},{"key":"10368_CR35","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2024.1366951","volume":"15","author":"N Faridy","year":"2024","unstructured":"Faridy N, Torabi E, Pourbabaee AA, Osdaghi E, Talebi K (2024) Efficacy of novel bacterial consortia in degrading fipronil and thiobencarb in paddy soil: a survey for community structure and metabolic pathways. Front Microbiol 15:1366951. https:\/\/doi.org\/10.3389\/fmicb.2024.1366951","journal-title":"Front Microbiol"},{"issue":"1","key":"10368_CR36","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1038\/s41598-020-72138-9","volume":"10","author":"KE French","year":"2020","unstructured":"French KE, Zhou Z, Terry N (2020) Horizontal \u2018gene drives\u2019 harness indigenous bacteria for bioremediation. Sci Rep 10(1):1\u201312. https:\/\/doi.org\/10.1038\/s41598-020-72138-9","journal-title":"Sci Rep"},{"key":"10368_CR37","doi-asserted-by":"publisher","DOI":"10.1016\/j.ecoenv.2020.110734","volume":"200","author":"VR G\u00f3ngora-Echeverr\u00eda","year":"2020","unstructured":"G\u00f3ngora-Echeverr\u00eda VR, Garc\u00eda-Escalante R, Rojas-Herrera R, L\u00f3pez-Chuken UJ, Rubio-Arias H (2020) Pesticide bioremediation in liquid media using a microbial consortium and bacteria-pure strains isolated from a bio-mixture used in agricultural areas. Ecotoxicol Environ Saf 200:110734. https:\/\/doi.org\/10.1016\/j.ecoenv.2020.110734","journal-title":"Ecotoxicol Environ Saf"},{"key":"10368_CR38","doi-asserted-by":"publisher","DOI":"10.3390\/ijms242115969","volume":"24","author":"JR Guerrero Ram\u00edrez","year":"2023","unstructured":"Guerrero Ram\u00edrez JR, Ibarra Mu\u00f1oz LA, Balagurusamy N, Fr\u00edas Ram\u00edrez JE, Alfaro Hern\u00e1ndez L, Carrillo Campos J (2023) Microbiology and biochemistry of pesticides biodegradation. Int J Mol Sci 24:15969. https:\/\/doi.org\/10.3390\/ijms242115969","journal-title":"Int J Mol Sci"},{"issue":"1","key":"10368_CR39","doi-asserted-by":"publisher","first-page":"2","DOI":"10.1186\/s40508-016-0046-9","volume":"4","author":"R Gupta","year":"2016","unstructured":"Gupta R (2016) Recent advances in enzyme promiscuity. Sustain Chem Process 4(1):2. https:\/\/doi.org\/10.1186\/s40508-016-0046-9","journal-title":"Sustain Chem Process"},{"issue":"6","key":"10368_CR40","doi-asserted-by":"publisher","first-page":"151","DOI":"10.1007\/s11274-023-03603-6","volume":"39","author":"S Hassan","year":"2023","unstructured":"Hassan S, Ganai BA (2023) Deciphering the recent trends in pesticide bioremediation using genome editing and multi-omics approaches: a review. World J Microbiol Biotechnol 39:151","journal-title":"World J Microbiol Biotechnol"},{"issue":"9","key":"10368_CR41","doi-asserted-by":"publisher","DOI":"10.3390\/molecules23092313","volume":"23","author":"Y Huang","year":"2018","unstructured":"Huang Y, Xiao L, Li F, Xiao M, Lin D, Long X, Wu Z (2018) Microbial degradation of pesticide residues and an emphasis on the degradation of cypermethrin and 3-phenoxy benzoic acid: a review. Molecules 23(9):2313. https:\/\/doi.org\/10.3390\/molecules23092313","journal-title":"Molecules"},{"key":"10368_CR42","doi-asserted-by":"publisher","DOI":"10.1016\/j.envres.2020.110660","volume":"194","author":"Y Huang","year":"2021","unstructured":"Huang Y, Zhang W, Pang S, Chen J, Bhatt P, Mishra S, Chen S (2021) Insights into the microbial degradation and catalytic mechanisms of chlorpyrifos. Environ Res 194:110660. https:\/\/doi.org\/10.1016\/j.envres.2020.110660","journal-title":"Environ Res"},{"issue":"10","key":"10368_CR125","doi-asserted-by":"publisher","first-page":"843","DOI":"10.1080\/10643380802039572","volume":"39","author":"S Hussain","year":"2015","unstructured":"Hussain S, Siddique T, Arshad M, Saleem M (2015) Bioremediation and phytoremediation of pesticides: Recent advances. Critical Reviews in Environmental Science and Technology 39(10):843\u2013907. https:\/\/doi.org\/10.1080\/10643380802039572","journal-title":"Critical Reviews in Environmental Science and Technology"},{"key":"10368_CR43","doi-asserted-by":"publisher","DOI":"10.3390\/ijms241814370","volume":"24","author":"T Iasakov","year":"2023","unstructured":"Iasakov T (2023) Evolution end classification of tfd gene clusters mediating bacterial degradation of 2,4-dichlorophenoxyacetic acid (2,4-D). Int J Mol Sci 24:14370. https:\/\/doi.org\/10.3390\/ijms241814370","journal-title":"Int J Mol Sci"},{"issue":"1","key":"10368_CR44","doi-asserted-by":"publisher","first-page":"101","DOI":"10.1007\/s10311-025-01880-1","volume":"24","author":"NF Islam","year":"2026","unstructured":"Islam NF, Borah D, Saikia R, Gogoi B, Sarma H (2026) Microbial dehalogenation of halogenated organic pollutants: a review. Environ Chem Lett 24(1):101\u2013137. https:\/\/doi.org\/10.1007\/s10311-025-01880-1","journal-title":"Environ Chem Lett"},{"key":"10368_CR45","doi-asserted-by":"publisher","first-page":"1617","DOI":"10.3389\/fpls.2017.01617","volume":"8","author":"R Jacoby","year":"2017","unstructured":"Jacoby R, Peukert M, Succop A, Koprivova A, Kopriva S (2017) The role of soil microorganisms in plant mineral nutrition: current knowledge and future directions. Front Plant Sci 8:1617. https:\/\/doi.org\/10.3389\/fpls.2017.01617","journal-title":"Front Plant Sci"},{"issue":"1","key":"10368_CR46","doi-asserted-by":"publisher","first-page":"11","DOI":"10.53623\/tebt.v3i1.627","volume":"3","author":"UG Jayasekara","year":"2025","unstructured":"Jayasekara UG, Nabila B, Kristanti RA, Hossain FMA, Jannat MAH, Ruti AA, Twum-Ampofo D, Direstiyani LC (2025) Eco-friendly strategies for pesticide removal: biotechnological and microbial approaches. Trop Environ Biol Technol 3(1):11\u201324. https:\/\/doi.org\/10.53623\/tebt.v3i1.627","journal-title":"Trop Environ Biol Technol"},{"key":"10368_CR47","doi-asserted-by":"publisher","DOI":"10.1016\/j.pestbp.2025.106636","author":"K Ji","year":"2025","unstructured":"Ji K, Rong Y, Zhang Z, Chen Y, Hu R, Chu Y, Yang C (2025) Neonicotinoids and human health: environmental fate, toxicity mechanisms, and future directions. Pestic Biochem Physiol. https:\/\/doi.org\/10.1016\/j.pestbp.2025.106636","journal-title":"Pestic Biochem Physiol"},{"issue":"24","key":"10368_CR48","doi-asserted-by":"publisher","first-page":"e01866","DOI":"10.1128\/AEM.01866-18","volume":"84","author":"R Kamini Sharma","year":"2018","unstructured":"Kamini Sharma R, Punekar NS, Phale PS (2018) Carbaryl as a carbon and nitrogen source: an inducible methylamine metabolic pathway at the biochemical and molecular levels in pseudomonas sp. strain C5 pp. Appl Environ Microbiol 84(24):e01866-18. https:\/\/doi.org\/10.1128\/AEM.01866-18","journal-title":"Appl Environ Microbiol"},{"key":"10368_CR49","doi-asserted-by":"publisher","DOI":"10.1007\/s11270-026-09181-1","volume":"237","author":"A Kaur","year":"2026","unstructured":"Kaur A, Patowary R (2026) Understanding the impact of endocrine disrupting chemicals (EDCs) and mechanisms of microbial biodegradation: a review. Water Air Soil Pollut 237:532. https:\/\/doi.org\/10.1007\/s11270-026-09181-1","journal-title":"Water Air Soil Pollut"},{"issue":"11","key":"10368_CR50","doi-asserted-by":"publisher","first-page":"296","DOI":"10.1007\/s11274-023-03737-7.pdf","volume":"39","author":"MF Khan","year":"2023","unstructured":"Khan MF, Hof C, Niemcov\u00e1 P, Murphy CD (2023) Recent advances in fungal xenobiotic metabolism: enzymes and applications. World J Microbiol Biotechnol 39(11):296. https:\/\/doi.org\/10.1007\/s11274-023-03737-7.pdf","journal-title":"World J Microbiol Biotechnol"},{"issue":"5","key":"10368_CR51","doi-asserted-by":"publisher","first-page":"187","DOI":"10.1007\/s41742-025-00857-w","volume":"19","author":"M Kiran","year":"2025","unstructured":"Kiran M, Sindhu R, Raju NS, Supreeth M (2025) Recent advances in biological removal of chlorpyrifos from the environment. Int J Environ Res 19(5):187. https:\/\/doi.org\/10.1007\/s41742-025-00857-w","journal-title":"Int J Environ Res"},{"key":"10368_CR52","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-025-02696-3","volume":"15","author":"P Ksi\u0105\u017cek-Trela","year":"2025","unstructured":"Ksi\u0105\u017cek-Trela P, Potocki L, Szpyrka E (2025) The impact of novel bacterial strains and their consortium on diflufenican degradation in the mineral medium and soil. Sci Rep 15:18051. https:\/\/doi.org\/10.1038\/s41598-025-02696-3","journal-title":"Sci Rep"},{"issue":"2","key":"10368_CR53","doi-asserted-by":"publisher","first-page":"190","DOI":"10.1016\/S1002-0160(18)60017-7","volume":"28","author":"S Kumar","year":"2018","unstructured":"Kumar S, Kaushik G, Dar MA, Nimesh S, Lopez-Chuken UJ, Villarreal-Chiu JF (2018) Microbial degradation of organophosphate pesticides: a review. Pedosphere 28(2):190\u2013208. https:\/\/doi.org\/10.1016\/S1002-0160(18)60017-7","journal-title":"Pedosphere"},{"issue":"2","key":"10368_CR54","doi-asserted-by":"publisher","first-page":"467","DOI":"10.3390\/microorganisms14020467","volume":"14","author":"A Lerner","year":"2026","unstructured":"Lerner A, Lieber AD, Nelson-Dooley C, Leu A, Perro M, Koch G, Smith J (2026) Genetically modified microorganisms: risks and regulatory considerations for human and environmental health. Microorganisms 14(2):467. https:\/\/doi.org\/10.3390\/microorganisms14020467","journal-title":"Microorganisms"},{"key":"10368_CR55","doi-asserted-by":"publisher","DOI":"10.1016\/j.scitotenv.2021.150758","author":"MR Lescano","year":"2022","unstructured":"Lescano MR et al (2022) Biodegradation of pesticide-contaminated wastewaters from a formulation plant employing a pilot scale biobed. Sci Total Environ. https:\/\/doi.org\/10.1016\/j.scitotenv.2021.150758","journal-title":"Sci Total Environ"},{"issue":"20","key":"10368_CR56","doi-asserted-by":"publisher","first-page":"2928","DOI":"10.3390\/w13202928","volume":"13","author":"X Li","year":"2021","unstructured":"Li X, Wu S, Dong Y, Fan H, Bai Z, Zhuang X (2021) Engineering microbial consortia towards bioremediation. Water 13(20):2928. https:\/\/doi.org\/10.3390\/w13202928","journal-title":"Water"},{"issue":"142","key":"10368_CR57","doi-asserted-by":"publisher","first-page":"151","DOI":"10.1016\/j.ymben.2021.11.010","volume":"69","author":"Z Li","year":"2022","unstructured":"Li Z, Wang X, Zhang H, Huang L (2022) Multi-metabolite cross-feeding stabilizes microbial consortium compositions and enhances biodegradation efficiency. Metab Eng 69(142):151. https:\/\/doi.org\/10.1016\/j.ymben.2021.11.010","journal-title":"Metab Eng"},{"key":"10368_CR58","doi-asserted-by":"publisher","first-page":"1065349","DOI":"10.3389\/fmicb.2023.1065349","volume":"14","author":"X Li","year":"2023","unstructured":"Li X, Zhang Y, Wang Z, Liu Y, Liu H, Lv M (2023) Microbial degradation of organophosphorus pesticides: novel pathways, enzymes and regulatory mechanisms. Front Microbiol 14:1065349. https:\/\/doi.org\/10.3389\/fmicb.2023.1065349","journal-title":"Front Microbiol"},{"issue":"1","key":"10368_CR59","doi-asserted-by":"publisher","DOI":"10.1093\/ismejo\/wrae115","volume":"18","author":"J Li","year":"2024","unstructured":"Li J, Luo C, Cai X, Zhang D, Guan G, Li B, Zhang G (2024a) Microbial consortium assembly and functional analysis via isotope labelling and single-cell manipulation of polycyclic aromatic hydrocarbon degraders. ISME J 18(1):wrae115. https:\/\/doi.org\/10.1093\/ismejo\/wrae115","journal-title":"ISME J"},{"issue":"1","key":"10368_CR60","doi-asserted-by":"publisher","first-page":"7","DOI":"10.1007\/s44169-024-00058-0","volume":"262","author":"Q Li","year":"2024","unstructured":"Li Q, Wen D, Qin C, Qian Y, Fu R, Lin S (2024b) Physical, chemical, biological, and synergistic technologies for remediation of pesticide-contaminated soil. Rev Environ Contam Toxicol 262(1):7. https:\/\/doi.org\/10.1007\/s44169-024-00058-0","journal-title":"Rev Environ Contam Toxicol"},{"key":"10368_CR61","doi-asserted-by":"publisher","DOI":"10.1186\/s13068-022-02113-1","author":"L Lin","year":"2022","unstructured":"Lin L (2022) Bottom-up synthetic ecology study of microbial consortia to enhance lignocellulose bioconversion. Biotechnol Biofuels Bioprod. https:\/\/doi.org\/10.1186\/s13068-022-02113-1","journal-title":"Biotechnol Biofuels Bioprod"},{"key":"10368_CR62","doi-asserted-by":"publisher","DOI":"10.1186\/s12934-021-01544-z","author":"H Liu","year":"2021","unstructured":"Liu H, Yuan M, Liu A, Ren L, Zhu G, Sun L (2021) A bifunctional enzyme belonging to cytochrome P450 family involved in the O-dealkylation and N-dealkoxymethylation toward chloroacetanilide herbicides in Rhodococcus sp. B2. Microb Cell Fact. https:\/\/doi.org\/10.1186\/s12934-021-01544-z","journal-title":"Microb Cell Fact"},{"key":"10368_CR63","doi-asserted-by":"publisher","DOI":"10.1016\/j.apsoil.2023.105011","volume":"190","author":"X Liu","year":"2023","unstructured":"Liu X, Mei S, Salles JF (2023) Inoculated microbial consortia perform better than single strains in living soil: a meta-analysis. Appl Soil Ecol 190:105011. https:\/\/doi.org\/10.1016\/j.apsoil.2023.105011","journal-title":"Appl Soil Ecol"},{"key":"10368_CR64","doi-asserted-by":"publisher","DOI":"10.1016\/j.ceja.2026.101052","volume":"25","author":"P Loganathan","year":"2026","unstructured":"Loganathan P (2026) Harnessing artificial intelligence and machine learning for next-generation bioremediation. Chem Eng J Adv 25:101052. https:\/\/doi.org\/10.1016\/j.ceja.2026.101052","journal-title":"Chem Eng J Adv"},{"key":"10368_CR65","doi-asserted-by":"publisher","DOI":"10.1016\/j.biotechadv.2021.107834","volume":"54","author":"AR Lopes","year":"2022","unstructured":"Lopes AR, Teixeira A, Carvalho MF, Becker J (2022a) Pure culture metabolic engineering provides essential insights into microbial pesticide catabolic pathways and key metabolic products. Biotechnol Adv 54:107834. https:\/\/doi.org\/10.1016\/j.biotechadv.2021.107834","journal-title":"Biotechnol Adv"},{"issue":"4","key":"10368_CR66","doi-asserted-by":"publisher","first-page":"851","DOI":"10.1007\/s11157-022-09637-w","volume":"21","author":"PRM Lopes","year":"2022","unstructured":"Lopes PRM, Cruz VH, De Menezes AB, Gadanhoto BP, Moreira BRDA, Mendes CR, Montagnolli RN (2022b) Microbial bioremediation of pesticides in agricultural soils: an integrative review on natural attenuation, bioaugmentation and biostimulation. Rev Environ Sci Biotechnol 21(4):851\u2013876. https:\/\/doi.org\/10.1007\/s11157-022-09637-w","journal-title":"Rev Environ Sci Biotechnol"},{"key":"10368_CR67","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2021.648868","volume":"12","author":"H Malhotra","year":"2021","unstructured":"Malhotra H, Kaur S, Phale PS (2021) Conserved metabolic and evolutionary themes in microbial degradation of carbamate pesticides. Front Microbiol 12:648868. https:\/\/doi.org\/10.3389\/fmicb.2021.648868","journal-title":"Front Microbiol"},{"key":"10368_CR68","doi-asserted-by":"publisher","DOI":"10.1016\/j.jtice.2023.104744","volume":"144","author":"MA Malla","year":"2023","unstructured":"Malla MA, Dubey A, Kumar A, Patil A, Ahmad S, Kothari R, Yadav S (2023) Optimization and elucidation of organophosphorus and pyrethroid degradation pathways by a novel bacterial consortium using GC\u2013MS-based metabolomics. J Taiwan Inst Chem Eng 144:104744. https:\/\/doi.org\/10.1016\/j.jtice.2023.104744","journal-title":"J Taiwan Inst Chem Eng"},{"issue":"4","key":"10368_CR69","doi-asserted-by":"publisher","first-page":"1451","DOI":"10.1128\/aem.61.4.1451-1457.1995","volume":"61","author":"RT Mandelbaum","year":"1995","unstructured":"Mandelbaum RT, Allan DL, Wackett LP (1995) Isolation and characterization of a Pseudomonas sp. that mineralizes the s-triazine herbicide atrazine. Appl Environ Microbiol 61(4):1451\u20131457. https:\/\/doi.org\/10.1128\/aem.61.4.1451-1457.1995","journal-title":"Appl Environ Microbiol"},{"issue":"1","key":"10368_CR70","doi-asserted-by":"publisher","first-page":"309","DOI":"10.1007\/s12010-016-2214-5","volume":"181","author":"A Mansouri","year":"2017","unstructured":"Mansouri A, Cregut M, Abbes C, Durand MJ, Landoulsi A, Thouand G (2017) The environmental issues of DDT pollution and bioremediation: a multidisciplinary review. Appl Biochem Biotechnol 181(1):309. https:\/\/doi.org\/10.1007\/s12010-016-2214-5","journal-title":"Appl Biochem Biotechnol"},{"issue":"1","key":"10368_CR71","doi-asserted-by":"publisher","DOI":"10.1111\/1751-7915.70071","volume":"18","author":"A Marquiegui\u2013Alvaro","year":"2025","unstructured":"Marquiegui\u2013Alvaro A, Kottara A, Chac\u00f3n M, Cliffe L, Brockhurst M, Dixon N (2025) Genetic bioaugmentation\u2010mediated bioremediation of terephthalate in soil microcosms using an engineered environmental plasmid. Microb Biotechnol 18(1):e70071. https:\/\/doi.org\/10.1111\/1751-7915.70071","journal-title":"Microb Biotechnol"},{"issue":"7","key":"10368_CR72","doi-asserted-by":"publisher","first-page":"2283","DOI":"10.1007\/s00253-022-11864-8","volume":"106","author":"F Massot","year":"2022","unstructured":"Massot F, Bernard N, Alvarez LMM, Martorell MM, Mac Cormack WP, Ruberto LA (2022) Microbial associations for bioremediation. What does \u201cmicrobial consortia\u201d mean? Appl Microbiol Biotechnol 106(7):2283\u20132297. https:\/\/doi.org\/10.1007\/s00253-022-11864-8","journal-title":"Appl Microbiol Biotechnol"},{"key":"10368_CR73","doi-asserted-by":"publisher","first-page":"241","DOI":"10.1146\/annurev-pharmtox-010818-021747","volume":"60","author":"K Matsuda","year":"2020","unstructured":"Matsuda K, Ihara M, Sattelle DB (2020) Neonicotinoid insecticides: molecular targets, resistance, and toxicity. Annu Rev Pharmacol Toxicol 60:241\u2013255. https:\/\/doi.org\/10.1146\/annurev-pharmtox-010818-021747","journal-title":"Annu Rev Pharmacol Toxicol"},{"key":"10368_CR74","first-page":"1","volume":"33","author":"AM Mawad","year":"2023","unstructured":"Mawad AM, Hesham AEL, Mostafa YM, Shoreit A (2023) Microbial consortium for degradation of pesticides: a review. Egypt J Biol Pest Control 33:1\u201318","journal-title":"Egypt J Biol Pest Control"},{"issue":"2","key":"10368_CR75","doi-asserted-by":"publisher","first-page":"181","DOI":"10.1016\/j.tibtech.2018.11.002","volume":"37","author":"NS McCarty","year":"2019","unstructured":"McCarty NS, Ledesma-Amaro R (2019) Synthetic biology tools to engineer microbial communities for biotechnology. Trends Biotechnol 37(2):181\u2013197","journal-title":"Trends Biotechnol"},{"key":"10368_CR76","doi-asserted-by":"publisher","DOI":"10.1016\/j.chemosphere.2020.127419","volume":"259","author":"S Mishra","year":"2021","unstructured":"Mishra S, Zhang W, Lin Z, Pang S, Huang Y, Bhatt P, Chen S (2021) Carbofuran toxicity and its microbial degradation in contaminated environments. Chemosphere 259:127419. https:\/\/doi.org\/10.1016\/j.chemosphere.2020.127419","journal-title":"Chemosphere"},{"key":"10368_CR77","doi-asserted-by":"publisher","DOI":"10.3389\/fbioe.2021.602445","volume":"9","author":"B Mohapatra","year":"2021","unstructured":"Mohapatra B, Phale PS (2021) Microbial degradation of naphthalene and substituted naphthalenes: metabolic diversity and genomic insight for bioremediation. Front Bioeng Biotechnol 9:602445. https:\/\/doi.org\/10.3389\/fbioe.2021.602445","journal-title":"Front Bioeng Biotechnol"},{"issue":"2","key":"10368_CR78","doi-asserted-by":"publisher","first-page":"283","DOI":"10.1134\/S0036024424020146","volume":"98","author":"TI Mulashkina","year":"2024","unstructured":"Mulashkina TI, Kulakova AM, Nemukhin AV, Khrenova MG (2024) Comparison of the mechanisms of hydrolysis of organophosphates with good and poor leaving group by phosphotriesterase from pseudomonas diminuta. Russian J Phys Chem A 98(2):283\u2013289","journal-title":"Russian J Phys Chem A"},{"key":"10368_CR79","doi-asserted-by":"publisher","DOI":"10.19103\/AS.2025.0151","volume-title":"Contaminants in agricultural soils: challenges and solutions","year":"2025","unstructured":"Naidu R (ed) (2025) Contaminants in agricultural soils: challenges and solutions, 1st ed. Burleigh Dodds Science Publishing. https:\/\/doi.org\/10.19103\/AS.2025.0151","edition":"1st ed"},{"issue":"9","key":"10368_CR80","first-page":"935","volume":"8","author":"G Negi","year":"2014","unstructured":"Negi G, Pankaj SA, Sharma A (2014) In situ biodegradation of endosulfan, imidacloprid, and carbendazim using indigenous bacterial cultures of agriculture fields of Uttarakhand, India. Int J Biol Food Vat Agric Eng 8(9):935\u2013943","journal-title":"Int J Biol Food Vat Agric Eng"},{"issue":"19","key":"10368_CR81","doi-asserted-by":"publisher","first-page":"8235","DOI":"10.1007\/s00253-014-5858-5","volume":"98","author":"TP Nguyen","year":"2014","unstructured":"Nguyen TP, Helbling DE, Bers K, Fida TT, Wattiez R, Kohler HP, Springael D, De Mot R (2014) Genetic and metabolic analysis of the carbofuran catabolic pathway in Novosphingobium sp. KN65.2. Appl Microbiol Biotechnol 98(19):8235\u20138252. https:\/\/doi.org\/10.1007\/s00253-014-5858-5","journal-title":"Appl Microbiol Biotechnol"},{"key":"10368_CR82","doi-asserted-by":"publisher","DOI":"10.1016\/j.psep.2025.107699","author":"DB Olawade","year":"2025","unstructured":"Olawade DB, Oladipo P, Ajisafe O, Egbon E, Fapohunda O, Kade A (2025) Genetically engineered microorganisms: a promising frontier for PFAS bioremediation. Process Saf Environ Prot. https:\/\/doi.org\/10.1016\/j.psep.2025.107699","journal-title":"Process Saf Environ Prot"},{"key":"10368_CR83","doi-asserted-by":"publisher","first-page":"353","DOI":"10.1016\/B978-0-12-818732-6.00025-3","volume-title":"Fruit crops","author":"G Padmaperuma","year":"2020","unstructured":"Padmaperuma G, Butler TO, Shuhaili FAA, Almalki WJ, Vaidyanathan S (2020) Microbial consortia: concept and application in fruit crop management. Fruit crops. Elsevier, pp 353\u2013366. https:\/\/doi.org\/10.1016\/B978-0-12-818732-6.00025-3"},{"issue":"20","key":"10368_CR84","doi-asserted-by":"publisher","DOI":"10.3390\/app14209346","volume":"14","author":"F Palladino","year":"2024","unstructured":"Palladino F, Marcelino PRF, Schlogl AE, Jos\u00e9 \u00c1HM, Rodrigues RdCLB, Fabrino DL, Santos IJB, Rosa CA (2024) Bioreactors: applications and innovations for a sustainable and healthy future\u2014a critical review. Appl Sci 14(20):9346. https:\/\/doi.org\/10.3390\/app14209346","journal-title":"Appl Sci"},{"key":"10368_CR85","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2020.00868","volume":"11","author":"S Pang","year":"2020","unstructured":"Pang S, Lin Z, Zhang W, Zhang Y, Bhatt P, Chen S (2020) Insights into the microbial degradation and biochemical mechanisms of neonicotinoids. Front Microbiol 11:868. https:\/\/doi.org\/10.3389\/fmicb.2020.00868","journal-title":"Front Microbiol"},{"key":"10368_CR86","doi-asserted-by":"publisher","first-page":"97","DOI":"10.1016\/j.cois.2018.04.007","volume":"27","author":"N Pavlidi","year":"2018","unstructured":"Pavlidi N, Vontas J, Van Leeuwen T (2018) The role of glutathione S-transferases (GSTs) in insecticide resistance in crop pests and disease vectors. Curr Opin Insect Sci 27:97\u2013102. https:\/\/doi.org\/10.1016\/j.cois.2018.04.007","journal-title":"Curr Opin Insect Sci"},{"key":"10368_CR87","doi-asserted-by":"publisher","DOI":"10.1186\/s13213-025-01831-9","author":"D Pegu","year":"2025","unstructured":"Pegu D, Sarkar S, Kumar A, Teronpi V (2025) Sustainable bioremediation through microbial community design and smart ecological monitoring. Ann Microbiol. https:\/\/doi.org\/10.1186\/s13213-025-01831-9","journal-title":"Ann Microbiol"},{"key":"10368_CR88","doi-asserted-by":"publisher","first-page":"1562","DOI":"10.1016\/j.matpr.2022.07.190","volume":"68","author":"R Praveen","year":"2022","unstructured":"Praveen R, Nagalakshmi R (2022) Review on bioremediation and phytoremediation techniques of heavy metals in contaminated soil from dump site. Mater Today Proc 68:1562\u20131567. https:\/\/doi.org\/10.1016\/j.matpr.2022.07.190","journal-title":"Mater Today Proc"},{"key":"10368_CR89","doi-asserted-by":"publisher","DOI":"10.3390\/fermentation8060260","volume":"8","author":"M Qutob","year":"2022","unstructured":"Qutob M, Rafatullah M, Muhammad SA, Alosaimi AM, Alorfi HS, Hussein MA (2022) A review of pyrene bioremediation using Mycobacterium strains in a different matrix. Fermentation (Basel) 8:260. https:\/\/doi.org\/10.3390\/fermentation8060260","journal-title":"Fermentation (Basel)"},{"issue":"8","key":"10368_CR90","doi-asserted-by":"publisher","first-page":"2260","DOI":"10.1021\/acssynbio.4c00116","volume":"13","author":"L Raajaraam","year":"2024","unstructured":"Raajaraam L, Raman K (2024) Modeling microbial communities: perspective and challenges. ACS Synth Biol 13(8):2260\u20132270","journal-title":"ACS Synth Biol"},{"issue":"5","key":"10368_CR91","doi-asserted-by":"publisher","first-page":"846","DOI":"10.1021\/es9908319","volume":"34","author":"S Ripp","year":"2000","unstructured":"Ripp S, Nivens DE, Ahn Y, Werner C, Jarrell J, Easter JP, Cox CD, Burlage RS, Sayler GS (2000) Controlled field release of a bioluminescent genetically engineered microorganism for bioremediation process monitoring and control. Environ Sci Technol 34(5):846\u2013853. https:\/\/doi.org\/10.1021\/es9908319","journal-title":"Environ Sci Technol"},{"issue":"1","key":"10368_CR92","doi-asserted-by":"publisher","first-page":"53","DOI":"10.1038\/s41522-025-00683-0","volume":"11","author":"J Rodriguez","year":"2025","unstructured":"Rodriguez J, Cordaillat-Simmons M, Pot B, Druart C (2025) The regulatory framework for microbiome-based therapies: insights into European regulatory developments. NPJ Biofilms Microbiomes 11(1):53. https:\/\/doi.org\/10.1038\/s41522-025-00683-0","journal-title":"NPJ Biofilms Microbiomes"},{"issue":"52","key":"10368_CR93","doi-asserted-by":"publisher","first-page":"5305","DOI":"10.1021\/acs.biochem.9b00292","volume":"58","author":"MS Rogers","year":"2019","unstructured":"Rogers MS, Lipscomb JD (2019) Salicylate 5-hydroxylase: intermediates in aromatic hydroxylation by a Rieske monooxygenase. Biochemistry 58(52):5305\u20135319. https:\/\/doi.org\/10.1021\/acs.biochem.9b00292","journal-title":"Biochemistry"},{"key":"10368_CR94","doi-asserted-by":"publisher","DOI":"10.1007\/s42535-025-01256-4","author":"Y Rohilla","year":"2025","unstructured":"Rohilla Y, Pai A, Pandit S, Priya K, Ranjan N, Sharma K, Bhattacharya D (2025) A concise review on microbial degradation of pesticides and organohalogen compounds: recent advances and current challenges. Vegetos. https:\/\/doi.org\/10.1007\/s42535-025-01256-4","journal-title":"Vegetos"},{"issue":"9","key":"10368_CR95","doi-asserted-by":"publisher","DOI":"10.1007\/s11783-026-2240-7","volume":"20","author":"AK Sadvakasova","year":"2026","unstructured":"Sadvakasova AK, Zaletova DE, Kossalbayev BD, Bauenova MO, Shabala S, Allakhverdiev SI (2026) Advanced strategies for the development of synthetic microbiomes for effective pesticide biodegradation. Eng Environ 20(9):140. https:\/\/doi.org\/10.1007\/s11783-026-2240-7","journal-title":"Eng Environ"},{"issue":"7","key":"10368_CR96","doi-asserted-by":"publisher","first-page":"4402","DOI":"10.1128\/AEM.70.7.4402-4407.2004","volume":"70","author":"K Sajjaphan","year":"2004","unstructured":"Sajjaphan K, Shapir N, Wackett LP, Palmer M, Blackmon B, Tomkins J, Sadowsky MJ (2004) Arthrobacter aurescens TC1 atrazine catabolism genes trzN, atzB, and atzC are linked on a 160-kilobase region and are functional in Escherichia coli. Appl Environ Microbiol 70(7):4402\u20134407. https:\/\/doi.org\/10.1128\/AEM.70.7.4402-4407.2004","journal-title":"Appl Environ Microbiol"},{"issue":"3","key":"10368_CR97","doi-asserted-by":"publisher","first-page":"1301","DOI":"10.1007\/s11274-011-0879-z","volume":"28","author":"C Sasikala","year":"2012","unstructured":"Sasikala C, Jiwal S, Rout P, Ramya M (2012) Biodegradation of chlorpyrifos by bacterial consortium isolated from agriculture soil. World J Microbiol Biotechnol 28(3):1301\u20131308. https:\/\/doi.org\/10.1007\/s11274-011-0879-z","journal-title":"World J Microbiol Biotechnol"},{"issue":"24","key":"10368_CR98","doi-asserted-by":"publisher","first-page":"992","DOI":"10.5897\/AJMR2016","volume":"11","author":"G Satish","year":"2017","unstructured":"Satish G, Ashokrao DM, Arun SK (2017) Microbial degradation of pesticide: a review. Afr J Microbiol Res 11(24):992\u20131012. https:\/\/doi.org\/10.5897\/AJMR2016","journal-title":"Afr J Microbiol Res"},{"issue":"30","key":"10368_CR99","doi-asserted-by":"publisher","first-page":"40288","DOI":"10.1007\/s11356-021-14145-7","volume":"28","author":"K Sengupta","year":"2021","unstructured":"Sengupta K, Pal S (2021) A review on microbial diversity and genetic markers involved in methanogenic degradation of hydrocarbons. Environ Sci Pollut Res Int 28(30):40288\u201340307. https:\/\/doi.org\/10.1007\/s11356-021-14145-7","journal-title":"Environ Sci Pollut Res Int"},{"key":"10368_CR100","doi-asserted-by":"publisher","DOI":"10.1016\/j.pestbp.2025.106833","author":"M Shahid","year":"2025","unstructured":"Shahid M (2025) Molecular engineering and in-silico biotechnological innovations for microbial degradation of persistent pesticides. Pestic Biochem Physiol. https:\/\/doi.org\/10.1016\/j.pestbp.2025.106833","journal-title":"Pestic Biochem Physiol"},{"key":"10368_CR101","doi-asserted-by":"publisher","DOI":"10.1016\/j.envres.2023.116724","volume":"221","author":"M Shahid","year":"2023","unstructured":"Shahid M, Ameen F, Ahmad S, Ahmad I, Khan MS (2023) Pesticide-tolerant microbial consortia: potential candidates for remediation of pesticide-contaminated agricultural soils. Environ Res 221:116724. https:\/\/doi.org\/10.1016\/j.envres.2023.116724","journal-title":"Environ Res"},{"key":"10368_CR102","doi-asserted-by":"publisher","DOI":"10.7717\/peerj.19296","volume":"13","author":"C Silva-Andrade","year":"2025","unstructured":"Silva-Andrade C, Hern\u00e1ndez S, Saa P, Perez-Rueda E, Garrido D, Martin AJ (2025) A machine-learning approach for predicting butyrate production by microbial consortia using metabolic network information. PeerJ 13:e19296. https:\/\/doi.org\/10.7717\/peerj.19296","journal-title":"PeerJ"},{"issue":"5","key":"10368_CR103","doi-asserted-by":"publisher","DOI":"10.3390\/agronomy15051247","volume":"15","author":"KS Souza","year":"2025","unstructured":"Souza KS, da Silva MRF, Candido MA, Lins HTS, de Lima Torres G, da Silva Felix KC, de Oliveira MBM (2025) Biodegradation potential of glyphosate by bacteria: a systematic review on metabolic mechanisms and application strategies. Agronomy 15(5):1247. https:\/\/doi.org\/10.3390\/agronomy15051247","journal-title":"Agronomy"},{"key":"10368_CR104","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2026.1751932","volume":"17","author":"S Srivastava","year":"2026","unstructured":"Srivastava S, Mir RA, Hussain SJ, Mitra S, Srivastava S, Kumar P, Kaur H (2026) Microbial engineering for pesticide degradation: current insights and future directions for sustainable agriculture. Front Microbiol 17:1751932. https:\/\/doi.org\/10.3389\/fmicb.2026.1751932","journal-title":"Front Microbiol"},{"key":"10368_CR105","doi-asserted-by":"publisher","first-page":"281","DOI":"10.1007\/s00248-014-0489-z","volume":"69","author":"G Sun","year":"2015","unstructured":"Sun G, Zhang X, Hu Q, Zhang H, Li G (2015) Biodegradation of dichlorodiphenyltrichloroethanes (DDTs) and hexachlorocyclohexanes (HCHs) with plant and nutrients and their effects on the microbial ecological kinetics. Microb Ecol 69:281\u2013292. https:\/\/doi.org\/10.1007\/s00248-014-0489-z","journal-title":"Microb Ecol"},{"issue":"7","key":"10368_CR106","doi-asserted-by":"publisher","first-page":"2660","DOI":"10.1128\/jb.01418-06","volume":"189","author":"VP Swetha","year":"2007","unstructured":"Swetha VP, Basu A, Phale PS (2007) Purification and characterization of 1-naphthol-2-hydroxylase from carbaryl-degrading Pseudomonas strain C4. J Bacteriol 189(7):2660\u20132666. https:\/\/doi.org\/10.1128\/jb.01418-06","journal-title":"J Bacteriol"},{"issue":"11","key":"10368_CR107","doi-asserted-by":"publisher","first-page":"795","DOI":"10.1139\/cjm-2019-0183","volume":"65","author":"J Tang","year":"2019","unstructured":"Tang J, Hu Q, Liu B, Lei D, Chen T, Sun Q, Zeng C, Zhang Q (2019) Efficient biodegradation of 3-phenoxybenzoic acid and pyrethroid pesticides by the novel strain Klebsiella pneumoniae BPBA052. Can J Microbiol 65(11):795\u2013804","journal-title":"Can J Microbiol"},{"key":"10368_CR108","doi-asserted-by":"publisher","DOI":"10.1016\/j.ecoenv.2021.112440","volume":"221","author":"F Tang","year":"2021","unstructured":"Tang F, Yu H, Ma L, Wang C, Ke M, Qian H (2021) Understanding the influence of glyphosate on the microbial community structure of soil from a long-term field study. Ecotoxicol Environ Saf 221:112440. https:\/\/doi.org\/10.1016\/j.ecoenv.2021.112440","journal-title":"Ecotoxicol Environ Saf"},{"key":"10368_CR109","doi-asserted-by":"publisher","first-page":"607","DOI":"10.1038\/s41579-020-0412-1","volume":"18","author":"P Trivedi","year":"2020","unstructured":"Trivedi P, Leach JE, Tringe SG, Sa T, Singh BK (2020) Plant\u2013microbiome interactions: from community assembly to plant health. Nat Rev Microbiol 18:607\u2013621. https:\/\/doi.org\/10.1038\/s41579-020-0412-1","journal-title":"Nat Rev Microbiol"},{"issue":"3","key":"10368_CR110","doi-asserted-by":"publisher","DOI":"10.3390\/ijerph18031112","volume":"18","author":"M Tudi","year":"2021","unstructured":"Tudi M, Daniel Ruan H, Wang L, Lyu J, Sadler R, Connell D, Chu C, Phung DT (2021) Agriculture development, pesticide application and its impact on the environment. Int J Environ Res Public Health 18(3):1112. https:\/\/doi.org\/10.3390\/ijerph18031112","journal-title":"Int J Environ Res Public Health"},{"issue":"6978","key":"10368_CR111","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1038\/nature02340","volume":"428","author":"GW Tyson","year":"2004","unstructured":"Tyson GW, Chapman J, Hugenholtz P, Allen EE, Ram RJ, Richardson PM, Banfield JF (2004) Community structure and metabolism through reconstruction of microbial genomes from the environment. Nature 428(6978):37\u201343. https:\/\/doi.org\/10.1038\/nature02340","journal-title":"Nature"},{"key":"10368_CR112","doi-asserted-by":"publisher","first-page":"3270","DOI":"10.3390\/pr11123270","volume":"11","author":"M Ugrina","year":"2023","unstructured":"Ugrina M, Juri\u00b4c A (2023) Current trends and future perspectives in the remediation of polluted water, soil and air\u2014a review. Processes 11:3270. https:\/\/doi.org\/10.3390\/pr11123270","journal-title":"Processes"},{"issue":"3","key":"10368_CR124","doi-asserted-by":"publisher","first-page":"348","DOI":"10.1080\/09670874.2021.1973690","volume":"70","author":"EM Varghese","year":"2024","unstructured":"Varghese EM, Sivadas S, Suresh C, MS, J. U D., K, V., KP, A., (2024) Biodegradation of chlorpyrifos by an optimized Bacillus consortium isolated from pesticide-contaminated soils of Kerala. India. International Journal of Pest Management 70(3):348\u2013356","journal-title":"India. International Journal of Pest Management"},{"issue":"4","key":"10368_CR113","doi-asserted-by":"publisher","first-page":"429","DOI":"10.1007\/s11157-014-9341-7","volume":"13","author":"JP Verma","year":"2014","unstructured":"Verma JP, Jaiswal DK, Sagar R (2014) Pesticide relevance and their microbial degradation: a-state-of-art. Rev Environ Sci Biotechnol 13(4):429\u2013466. https:\/\/doi.org\/10.1007\/s11157-014-9341-7","journal-title":"Rev Environ Sci Biotechnol"},{"issue":"1","key":"10368_CR114","doi-asserted-by":"publisher","first-page":"39","DOI":"10.1007\/s00253-001-0862-y","volume":"58","author":"LP Wackett","year":"2002","unstructured":"Wackett LP, Sadowsky MJ, Martinez B, Shapir N (2002) Biodegradation of atrazine and related s-triazine compounds: from enzymes to field studies. Appl Microbiol Biotechnol 58(1):39\u201345. https:\/\/doi.org\/10.1007\/s00253-001-0862-y","journal-title":"Appl Microbiol Biotechnol"},{"issue":"15","key":"10368_CR115","doi-asserted-by":"publisher","DOI":"10.3390\/ijerph19159519","volume":"19","author":"S Wang","year":"2022","unstructured":"Wang S, Xu C, Song L, Zhang J (2022) Anaerobic digestion of food waste and its microbial consortia: a historical review and future perspectives. Int J Environ Res Public Health 19(15):9519. https:\/\/doi.org\/10.3390\/ijerph19159519","journal-title":"Int J Environ Res Public Health"},{"key":"10368_CR116","doi-asserted-by":"publisher","first-page":"1429","DOI":"10.3389\/fmicb.2020.01429","volume":"11","author":"B Xu","year":"2020","unstructured":"Xu B, Xue R, Zhou J, Wen X, Shi Z, Chen M, Xin F, Zhang W, Dong W, Jiang M (2020) Characterization of acetamiprid biodegradation by the microbial consortium ACE-3 enriched from contaminated soil. Front Microbiol 11:1429. https:\/\/doi.org\/10.3389\/fmicb.2020.01429","journal-title":"Front Microbiol"},{"key":"10368_CR117","doi-asserted-by":"publisher","DOI":"10.1080\/07388551.2021.1898331","author":"W Xu","year":"2021","unstructured":"Xu W, Zhao S, Zhang W, Wu H, Guang C, Mu W (2021) Recent advances and future prospective of organophosphorus-degrading enzymes: identification, modification, and application. Crit Rev Biotechnol. https:\/\/doi.org\/10.1080\/07388551.2021.1898331","journal-title":"Crit Rev Biotechnol"},{"issue":"3-4","key":"10368_CR118","doi-asserted-by":"publisher","first-page":"484","DOI":"10.1016\/j.palaeo.2011.01.013","volume":"302","author":"MK Zapalski","year":"2011","unstructured":"Zapalski MK (2011) Is absence of proof a proof of absence? Comments on commensalism. Palaeogeogr Palaeoclimatol Palaeoecol 302(3\u20134):484\u2013488. https:\/\/doi.org\/10.1016\/j.palaeo.2011.01.013","journal-title":"Palaeogeogr Palaeoclimatol Palaeoecol"},{"key":"10368_CR119","doi-asserted-by":"publisher","DOI":"10.1016\/j.envres.2020.109138","volume":"182","author":"H Zhan","year":"2020","unstructured":"Zhan H, Huang Y, Lin Z, Bhatt P, Chen S (2020) New insights into the microbial degradation and catalytic mechanism of synthetic pyrethroids. Environ Res 182:109138. https:\/\/doi.org\/10.1016\/j.envres.2020.109138","journal-title":"Environ Res"},{"issue":"6","key":"10368_CR120","doi-asserted-by":"publisher","DOI":"10.3390\/ijms24066003","volume":"24","author":"Y Zhang","year":"2023","unstructured":"Zhang Y, Geng Y, Li S, Shi T, Ma X, Hua R, Fang L (2023) Efficient knocking out of the organophosphorus insecticides degradation gene opdB in Cupriavidus nantongensis X1T via CRISPR\/Cas9 with red system. Int J Mol Sci 24(6):6003. https:\/\/doi.org\/10.3390\/ijms24066003","journal-title":"Int J Mol Sci"},{"key":"10368_CR121","doi-asserted-by":"publisher","DOI":"10.3390\/ijms26073142","author":"X Zhang","year":"2025","unstructured":"Zhang X, Li Q, Wang H, Zhou Y (2025) Difenoconazole degradation by a novel microbial consortium TA01: metabolic pathways and community dynamics. J Appl Microbiol. https:\/\/doi.org\/10.3390\/ijms26073142","journal-title":"J Appl Microbiol"},{"issue":"1","key":"10368_CR122","doi-asserted-by":"publisher","DOI":"10.1016\/j.emcon.2024.100410","volume":"11","author":"W Zhou","year":"2025","unstructured":"Zhou W, Li M, Achal V (2025) A comprehensive review on environmental and human health impacts of chemical pesticide usage. Emerg Contam 11(1):100410. https:\/\/doi.org\/10.1016\/j.emcon.2024.100410","journal-title":"Emerg Contam"},{"key":"10368_CR123","doi-asserted-by":"publisher","DOI":"10.3390\/catal15020187","volume":"15","author":"S Zhu","year":"2025","unstructured":"Zhu S, Li M, Qian T, Chen J, Pan T (2025) Influenceof surfactants on interfacial microbial degradation of hydrophobicorganic compounds. Catalysts 15:187. https:\/\/doi.org\/10.3390\/catal15020187","journal-title":"Catalysts"}],"container-title":["Biodegradation"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s10532-026-10368-w.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s10532-026-10368-w","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s10532-026-10368-w.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,10,26]],"date-time":"2026-10-26T01:03:18Z","timestamp":1792976598000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s10532-026-10368-w"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,9,14]]},"references-count":125,"journal-issue":{"issue":"5","published-print":{"date-parts":[[2026,10]]}},"alternative-id":["10368"],"URL":"https:\/\/doi.org\/10.1007\/s10532-026-10368-w","relation":{},"ISSN":["0923-9820","1572-9729"],"issn-type":[{"value":"0923-9820","type":"print"},{"value":"1572-9729","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,9,14]]},"assertion":[{"value":"1 June 2026","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"30 August 2026","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"14 September 2026","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"The authors declare no competing interests.","order":1,"name":"Ethics","label":"Competing Interests","group":{"name":"EthicsHeading","label":"Declarations"}}],"article-number":"148"}}