{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,24]],"date-time":"2026-10-24T22:36:02Z","timestamp":1792881362019,"version":"4.5.0"},"reference-count":104,"publisher":"Springer Science and Business Media LLC","issue":"10","license":[{"start":{"date-parts":[[2026,10,1]],"date-time":"2026-10-01T00:00:00Z","timestamp":1790812800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2026,10,1]],"date-time":"2026-10-01T00:00:00Z","timestamp":1790812800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"funder":[{"name":"ClimGenOlive project"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Mol Breeding"],"published-print":{"date-parts":[[2026,10]]},"DOI":"10.1007\/s11032-026-01731-z","type":"journal-article","created":{"date-parts":[[2026,10,13]],"date-time":"2026-10-13T03:49:00Z","timestamp":1791863340000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Genome-wide association of flowering phenology stages in olive trees (Olea europaea L.): new insights from BLUPs and genotype \u00d7 environment responses"],"prefix":"10.1007","volume":"46","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6379-2605","authenticated-orcid":false,"given":"Othmane","family":"Lamoumni","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Omar","family":"Abou-Saaid","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hayat","family":"Zaher","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Adnane","family":"El Yaacoubi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gaetan","family":"Droc","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gautier","family":"Sarah","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Abdelilah","family":"Meddich","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Abdelmajid","family":"Moukhli","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Philippe","family":"Cubry","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cherkaoui","family":"El Modafar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-2936-8197","authenticated-orcid":false,"given":"Ahmed","family":"El Bakkali","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2026,10,13]]},"reference":[{"issue":"12","key":"1731_CR1","doi-asserted-by":"publisher","DOI":"10.3390\/agronomy12122975","volume":"12","author":"O Abou-Saaid","year":"2022","unstructured":"Abou-Saaid O, El Yaacoubi A, Moukhli A, El Bakkali A, Oulbi S, Delalande M et al (2022) Statistical approach to assess chill and heat requirements of olive tree based on flowering date and temperatures data: towards selection of adapted cultivars to global warming. Agronomy 12(12):2975. https:\/\/doi.org\/10.3390\/agronomy12122975","journal-title":"Agronomy"},{"issue":"4","key":"1731_CR2","doi-asserted-by":"publisher","first-page":"e0152943","DOI":"10.1371\/journal.pone.0152943","volume":"11","author":"F Alagna","year":"2016","unstructured":"Alagna F, Cirilli M, Galla G, Carbone F, Daddiego L, Facella P et al (2016) Transcript analysis and regulative events during flower development in olive (Olea europaea L). PLoS ONE 11(4):e0152943. https:\/\/doi.org\/10.1371\/journal.pone.0152943","journal-title":"PLoS ONE"},{"issue":"11","key":"1731_CR3","doi-asserted-by":"publisher","first-page":"1205","DOI":"10.21273\/HORTSCI.27.11.1205","volume":"27","author":"AR Alcal\u00e1","year":"1992","unstructured":"Alcal\u00e1 AR, Barranco D (1992) Prediction of flowering time in olive for the Cordoba olive collection. HortScience 27(11):1205\u20131207. https:\/\/doi.org\/10.21273\/HORTSCI.27.11.1205","journal-title":"HortScience"},{"issue":"7","key":"1731_CR4","doi-asserted-by":"publisher","first-page":"133","DOI":"10.1007\/s10681-021-02933-6","volume":"217","author":"A Alemu","year":"2021","unstructured":"Alemu A, Suliman S, Hagras A, Thabet S, Al-Abdallat A, Abdelmula AA, Tadesse W (2021) Multi-model genome-wide association and genomic prediction analysis of 16 agronomic, physiological and quality related traits in ICARDA spring wheat. Euphytica 217(7):133. https:\/\/doi.org\/10.1007\/s10681-021-02933-6","journal-title":"Euphytica"},{"issue":"1","key":"1731_CR5","doi-asserted-by":"publisher","first-page":"uhae265","DOI":"10.1093\/hr\/uhae265","volume":"12","author":"L Aqbouch","year":"2025","unstructured":"Aqbouch L, Abou-Saaid O, Sarah G, Zunino L, Segura V, Mournet P et al (2025) Genome-wide association analysis of flowering date in a collection of cultivated olive tree. Hortic Res 12(1):uhae265. https:\/\/doi.org\/10.1093\/hr\/uhae265","journal-title":"Hortic Res"},{"issue":"12","key":"1731_CR6","doi-asserted-by":"publisher","first-page":"3645","DOI":"10.1093\/plcell\/koab236","volume":"33","author":"P Ballester","year":"2021","unstructured":"Ballester P, Mart\u00ednez-Godoy MA, Ezquerro M, Navarrete-G\u00f3mez M, Trigueros M, Rodr\u00edguez-Concepci\u00f3n M, Ferr\u00e1ndiz C (2021) A transcriptional complex of NGATHA and bHLH transcription factors directs stigma development in Arabidopsis. Plant Cell 33(12):3645\u20133657. https:\/\/doi.org\/10.1093\/plcell\/koab236","journal-title":"Plant Cell"},{"key":"1731_CR7","doi-asserted-by":"publisher","first-page":"162","DOI":"10.1016\/j.scienta.2019.01.046","volume":"249","author":"M Benlloch-Gonz\u00e1lez","year":"2019","unstructured":"Benlloch-Gonz\u00e1lez M, S\u00e1nchez-Lucas R, Bejaoui MA, Benlloch M, Fern\u00e1ndez-Escobar R (2019) Global warming effects on yield and fruit maturation of olive trees growing under field conditions. Sci Hort 249:162\u2013167. https:\/\/doi.org\/10.1016\/j.scienta.2019.01.046","journal-title":"Sci Hort"},{"issue":"7","key":"1731_CR8","doi-asserted-by":"publisher","first-page":"629","DOI":"10.1016\/j.cub.2010.01.059","volume":"20","author":"BK Blackman","year":"2010","unstructured":"Blackman BK, Strasburg JL, Raduski AR, Michaels SD, Rieseberg LH (2010) The role of recently derived FT paralogs in sunflower domestication. Curr Biol 20(7):629\u2013635. https:\/\/doi.org\/10.1016\/j.cub.2010.01.059","journal-title":"Curr Biol"},{"key":"1731_CR9","doi-asserted-by":"publisher","DOI":"10.1093\/hr\/uhac042","volume":"9","author":"C Branchereau","year":"2022","unstructured":"Branchereau C, Quero-Garc\u00eda J, Zaracho-Echag\u00fce NH, Lambelin L, Fouch\u00e9 M, Wenden B et al (2022) New insights into flowering date in Prunus: fine mapping of a major QTL in sweet cherry. Hortic Res 9:uhac042. https:\/\/doi.org\/10.1093\/hr\/uhac042","journal-title":"Hortic Res"},{"key":"1731_CR10","doi-asserted-by":"publisher","DOI":"10.3389\/fpls.2023.1142974","volume":"14","author":"C Branchereau","year":"2023","unstructured":"Branchereau C, Hardner C, Dirlewanger E, Wenden B, Le Dantec L, Alletru D et al (2023) Genotype-by-environment and QTL-by-environment interactions in sweet cherry (Prunus avium L.) for flowering date. Front Plant Sci 14:1142974. https:\/\/doi.org\/10.3389\/fpls.2023.1142974","journal-title":"Front Plant Sci"},{"issue":"2","key":"1731_CR11","doi-asserted-by":"publisher","first-page":"703","DOI":"10.1111\/nph.12658","volume":"202","author":"S Cast\u00e8de","year":"2014","unstructured":"Cast\u00e8de S, Campoy JA, Garc\u00eda JQ, Le Dantec L, Lafargue M, Barreneche T et al (2014) Genetic determinism of phenological traits highly affected by climate change in Prunus avium: flowering date dissected into chilling and heat requirements. New Phytol 202(2):703\u2013715. https:\/\/doi.org\/10.1111\/nph.12658","journal-title":"New Phytol"},{"issue":"7","key":"1731_CR12","doi-asserted-by":"publisher","first-page":"793","DOI":"10.1007\/s13258-017-0546-3","volume":"39","author":"Z Chen","year":"2017","unstructured":"Chen Z, Yang X, Su X, Gao K, Rao P, An X (2017) A comprehensive gene network for fine tuning floral development in poplar. Genes Genomics 39(7):793\u2013803. https:\/\/doi.org\/10.1007\/s13258-017-0546-3","journal-title":"Genes Genomics"},{"issue":"17","key":"1731_CR13","doi-asserted-by":"publisher","first-page":"i884","DOI":"10.1093\/bioinformatics\/bty560","volume":"34","author":"S Chen","year":"2018","unstructured":"Chen S, Zhou Y, Chen Y, Gu J (2018) fastp: an ultra-fast all-in-one FASTQ preprocessor. Bioinformatics 34(17):i884\u2013i890. https:\/\/doi.org\/10.1093\/bioinformatics\/bty560","journal-title":"Bioinformatics"},{"issue":"1","key":"1731_CR14","doi-asserted-by":"publisher","first-page":"293","DOI":"10.1111\/nph.15777","volume":"223","author":"HB Chhetri","year":"2019","unstructured":"Chhetri HB, Macaya-Sanz D, Kainer D, Biswal AK, Evans LM, Chen JG et al (2019) Multitrait genome\u2010wide association analysis of Populus trichocarpa identifies key polymorphisms controlling morphological and physiological traits. New Phytol 223(1):293\u2013309. https:\/\/doi.org\/10.1111\/nph.15777","journal-title":"New Phytol"},{"issue":"1","key":"1731_CR15","doi-asserted-by":"publisher","DOI":"10.1002\/tpg2.20077","volume":"14","author":"LT Cortes","year":"2021","unstructured":"Cortes LT, Zhang Z, Yu J (2021) Status and prospects of genome-wide association studies in plants. Plant Genome 14(1):e20077. https:\/\/doi.org\/10.1002\/tpg2.20077","journal-title":"Plant Genome"},{"issue":"15","key":"1731_CR16","doi-asserted-by":"publisher","first-page":"2156","DOI":"10.1093\/bioinformatics\/btr330","volume":"27","author":"P Danecek","year":"2011","unstructured":"Danecek P, Auton A, Abecasis G, Albers CA, Banks E, DePristo MA, Handsaker RE, Lunter G, Marth GT, Sherry ST, McVean G, Durbin R, 1000 Genomes Project Analysis Group (2011) The variant call format and VCFtools. Bioinformatics 27(15):2156\u20132158. https:\/\/doi.org\/10.1093\/bioinformatics\/btr330","journal-title":"Bioinformatics"},{"issue":"10","key":"1731_CR17","doi-asserted-by":"publisher","DOI":"10.1093\/hr\/uhad193","volume":"10","author":"F P\u00e9rez de los Cobos","year":"2023","unstructured":"P\u00e9rez de los Cobos F, Coindre E, Dlalah N, Quilot-Turion B, Batlle I, Ar\u00fas P et al (2023) Almond population genomics and non-additive GWAS reveal new insights into almond dissemination history and candidate genes for nut traits and blooming time. Hortic Res 10(10):uhad193. https:\/\/doi.org\/10.1093\/hr\/uhad193","journal-title":"Hortic Res"},{"issue":"1\u20132","key":"1731_CR18","doi-asserted-by":"publisher","first-page":"117","DOI":"10.1016\/j.agrformet.2004.02.009","volume":"125","author":"JP De Melo-Abreu","year":"2004","unstructured":"De Melo-Abreu JP, Barranco D, Cordeiro AM, Tous J, Rogado BM, Villalobos FJ (2004) Modelling olive flowering date using chilling for dormancy release and thermal time. Agric For Meteorol 125(1\u20132):117\u2013127. https:\/\/doi.org\/10.1016\/j.agrformet.2004.02.009","journal-title":"Agric For Meteorol"},{"issue":"1","key":"1731_CR19","doi-asserted-by":"publisher","first-page":"5","DOI":"10.1146\/annurev-ecolsys-110512-135806","volume":"44","author":"DL Des Marais","year":"2013","unstructured":"Des Marais DL, Hernandez KM, Juenger TE (2013) Genotype-by-environment interaction and plasticity: Exploring genomic responses of plants to the abiotic environment. Annu Rev Ecol Evol Syst 44(1):5\u201329. https:\/\/doi.org\/10.1146\/annurev-ecolsys-110512-135806","journal-title":"Annu Rev Ecol Evol Syst"},{"key":"1731_CR20","doi-asserted-by":"publisher","first-page":"73","DOI":"10.1016\/j.pbi.2015.11.007","volume":"29","author":"J Ding","year":"2016","unstructured":"Ding J, Nilsson O (2016) Molecular regulation of phenology in trees\u2014because the seasons they are a-changin\u2019. Curr Opin Plant Biol 29:73\u201379. https:\/\/doi.org\/10.1016\/j.pbi.2015.11.007","journal-title":"Curr Opin Plant Biol"},{"issue":"5","key":"1731_CR21","doi-asserted-by":"publisher","first-page":"280","DOI":"10.1038\/hdy.2012.38","volume":"109","author":"E Dirlewanger","year":"2012","unstructured":"Dirlewanger E, Quero-Garcia J, Le Dantec L, Lambert P, Ruiz D, Dondini L et al (2012) Comparison of the genetic determinism of two key phenological traits, flowering and maturity dates, in three Prunus species: peach, apricot and sweet cherry. Heredity 109(5):280\u2013292. https:\/\/doi.org\/10.1038\/hdy.2012.38","journal-title":"Heredity"},{"key":"1731_CR22","doi-asserted-by":"publisher","DOI":"10.1007\/s10113-020-01659-w","volume":"20","author":"P Drobinski","year":"2020","unstructured":"Drobinski P, Da Silva N, Bastin S, Mailler S, Muller C, Ahrens B et al (2020) How warmer and drier will the Mediterranean region be at the end of the twenty-first century? Reg Environ Change 20:78. https:\/\/doi.org\/10.1007\/s10113-020-01659-w","journal-title":"Reg Environ Change"},{"issue":"3","key":"1731_CR23","doi-asserted-by":"publisher","first-page":"291","DOI":"10.1371\/journal.pone.0042239","volume":"7","author":"K Ebine","year":"2012","unstructured":"Ebine K, Uemura T, Nakano A, Ueda T (2012) Flowering time modulation by a vacuolar SNARE via FLOWERING LOCUS C in Arabidopsis thaliana. Plant Signal Behav 7(3):291\u2013293. https:\/\/doi.org\/10.1371\/journal.pone.0042239","journal-title":"Plant Signal Behav"},{"issue":"10","key":"1731_CR24","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0223716","volume":"14","author":"A El Bakkali","year":"2019","unstructured":"El Bakkali A, Essalouh L, Tollon C, Rivallan R, Mournet P, Moukhli A et al (2019) Characterization of worldwide olive germplasm banks of Marrakech (Morocco) and C\u00f3rdoba (Spain): towards management and use of olive germplasm in breeding programs. PLoS One 14(10):e0223716. https:\/\/doi.org\/10.1371\/journal.pone.0223716","journal-title":"PLoS One"},{"key":"1731_CR25","doi-asserted-by":"publisher","first-page":"243","DOI":"10.1016\/j.scienta.2014.10.041","volume":"180","author":"A El Yaacoubi","year":"2014","unstructured":"El Yaacoubi A, Malagi G, Oukabli A, Hafidi M, Legave JM (2014) Global warming impact on floral phenology of fruit trees species in Mediterranean region. Sci Hortic 180:243\u2013253. https:\/\/doi.org\/10.1016\/j.scienta.2014.10.041","journal-title":"Sci Hortic"},{"issue":"6","key":"1731_CR26","doi-asserted-by":"publisher","first-page":"390","DOI":"10.1016\/j.tplants.2014.01.001","volume":"19","author":"M El-Soda","year":"2014","unstructured":"El-Soda M, Malosetti M, Zwaan BJ, Koornneef M, Aarts MG (2014) Genotype\u00d7 environment interaction QTL mapping in plants: lessons from Arabidopsis. Trends Plant Sci 19(6):390\u2013398. https:\/\/doi.org\/10.1016\/j.tplants.2014.01.001","journal-title":"Trends Plant Sci"},{"key":"1731_CR27","doi-asserted-by":"publisher","DOI":"10.3835\/plantgenome2011.08.0024","author":"JB Endelman","year":"2011","unstructured":"Endelman JB (2011) Ridge regression and other kernels for genomic selection with R package rrBLUP. Plant Genome. https:\/\/doi.org\/10.3835\/plantgenome2011.08.0024","journal-title":"Plant Genome"},{"issue":"10","key":"1731_CR28","doi-asserted-by":"publisher","first-page":"1089","DOI":"10.1038\/ng.3075","volume":"46","author":"LM Evans","year":"2014","unstructured":"Evans LM, Slavov GT, Rodgers-Melnick E, Martin J, Ranjan P, Muchero W et al (2014) Population genomics of Populus trichocarpa identifies signatures of selection and adaptive trait associations. Nat Genet 46(10):1089\u20131096. https:\/\/doi.org\/10.1038\/ng.3075","journal-title":"Nat Genet"},{"issue":"2","key":"1731_CR29","doi-asserted-by":"publisher","first-page":"241","DOI":"10.3390\/agronomy10020241","volume":"10","author":"E Fad\u00f3n","year":"2020","unstructured":"Fad\u00f3n E, Fernandez E, Behn H, Luedeling E (2020) A conceptual framework for winter dormancy in deciduous trees. Agronomy 10(2):241. https:\/\/doi.org\/10.3390\/agronomy10020241","journal-title":"Agronomy"},{"issue":"6","key":"1731_CR30","doi-asserted-by":"publisher","first-page":"740","DOI":"10.3390\/genes15060740","volume":"15","author":"Z Fan","year":"2024","unstructured":"Fan Z, Lin S, Jiang J, Zeng Y, Meng Y, Ren J, Wu P (2024) Dual-Model GWAS Analysis and Genomic Selection of Maize Flowering Time-Related Traits. Genes 15(6):740. https:\/\/doi.org\/10.3390\/genes15060740","journal-title":"Genes"},{"issue":"1","key":"1731_CR31","doi-asserted-by":"publisher","DOI":"10.1007\/s10113-022-02006-x","volume":"23","author":"E Fernandez","year":"2023","unstructured":"Fernandez E, Mojahid H, Fad\u00f3n E, Rodrigo J, Ruiz D, Egea JA et al (2023) Climate change impacts on winter chill in Mediterranean temperate fruit orchards. Reg Environ Change 23(1):7. https:\/\/doi.org\/10.1007\/s10113-022-02006-x","journal-title":"Reg Environ Change"},{"issue":"6","key":"1731_CR32","doi-asserted-by":"publisher","first-page":"742","DOI":"10.1071\/AR9630742","volume":"14","author":"KW Finlay","year":"1963","unstructured":"Finlay KW, Wilkinson GN (1963) The analysis of adaptation in a plant-breeding programme. Aust J Agric Res 14(6):742\u2013754. https:\/\/doi.org\/10.1071\/AR9630742","journal-title":"Aust J Agric Res"},{"issue":"4","key":"1731_CR33","doi-asserted-by":"publisher","first-page":"973","DOI":"10.1534\/genetics.113.160572","volume":"196","author":"E Frichot","year":"2014","unstructured":"Frichot E, Mathieu F, Trouillon T, Bouchard G, Fran\u00e7ois O (2014) Fast and efficient estimation of individual ancestry coefficients. Genetics 196(4):973\u2013983. https:\/\/doi.org\/10.1534\/genetics.113.160572","journal-title":"Genetics"},{"issue":"1","key":"1731_CR34","doi-asserted-by":"publisher","first-page":"57","DOI":"10.1111\/tpj.13930","volume":"95","author":"C Gaillochet","year":"2018","unstructured":"Gaillochet C, Jamge S, van der Wal F, Angenent G, Immink R, Lohmann JU (2018) A molecular network for functional versatility of HECATE transcription factors. Plant J 95(1):57\u201370. https:\/\/doi.org\/10.1111\/tpj.13930","journal-title":"Plant J"},{"issue":"2","key":"1731_CR35","doi-asserted-by":"publisher","first-page":"1107","DOI":"10.1104\/pp.103.021212","volume":"132","author":"S Gazzani","year":"2003","unstructured":"Gazzani S, Gendall AR, Lister C, Dean C (2003) Analysis of the molecular basis of flowering time variation in Arabidopsis accessions. Plant Physiol 132(2):1107\u20131114. https:\/\/doi.org\/10.1104\/pp.103.021212","journal-title":"Plant Physiol"},{"issue":"1","key":"1731_CR36","doi-asserted-by":"publisher","first-page":"184","DOI":"10.1111\/j.1471-8286.2004.00828.x","volume":"5","author":"J Goudet","year":"2005","unstructured":"Goudet J (2005) Hierfstat, a package for R to compute and test hierarchical F-statistics. Mol Ecol Notes 5(1):184\u2013186. https:\/\/doi.org\/10.1111\/j.1471-8286.2004.00828.x","journal-title":"Mol Ecol Notes"},{"key":"1731_CR37","doi-asserted-by":"publisher","first-page":"109","DOI":"10.1016\/B978-0-12-800271-1.00002-0","volume":"85","author":"PK Gupta","year":"2014","unstructured":"Gupta PK, Kulwal PL, Jaiswal V (2014) Association mapping in crop plants: opportunities and challenges. Adv Genet 85:109\u2013147. https:\/\/doi.org\/10.1016\/B978-0-12-800271-1.00002-0","journal-title":"Adv Genet"},{"key":"1731_CR38","doi-asserted-by":"publisher","first-page":"75","DOI":"10.1016\/bs.adgen.2018.12.001","volume":"104","author":"PK Gupta","year":"2019","unstructured":"Gupta PK, Kulwal PL, Jaiswal V (2019) Association mapping in plants in the post-GWAS genomics era. Adv Genet 104:75\u2013154. https:\/\/doi.org\/10.1016\/bs.adgen.2018.12.001","journal-title":"Adv Genet"},{"issue":"8","key":"1731_CR39","doi-asserted-by":"publisher","first-page":"1263","DOI":"10.1111\/pce.12922","volume":"40","author":"A Haberman","year":"2017","unstructured":"Haberman A, Bakhshian O, Cerezo-Medina S, Paltiel J, Adler C, Ben\u2010Ari G et al (2017) A possible role for flowering locus T\u2010encoding genes in interpreting environmental and internal cues affecting olive (Olea europaea L.) flower induction. Plant Cell Environ 40(8):1263\u20131280. https:\/\/doi.org\/10.1111\/pce.12922","journal-title":"Plant Cell Environ"},{"issue":"5","key":"1731_CR40","doi-asserted-by":"publisher","first-page":"383","DOI":"10.1086\/336223","volume":"124","author":"WP Hackett","year":"1963","unstructured":"Hackett WP, Hartmann HT (1963) Morphological development of buds of olive as related to low-temperature requirement for inflorescence formation. Bot Gaz 124(5):383\u2013387. https:\/\/doi.org\/10.1086\/336223","journal-title":"Bot Gaz"},{"issue":"2","key":"1731_CR41","doi-asserted-by":"publisher","first-page":"430","DOI":"10.1111\/j.1399-3054.1967.tb07183.x","volume":"20","author":"WP Hackett","year":"1967","unstructured":"Hackett WP, Hartmann HT (1967) The influence of temperature on floral initiation in the olive. Physiol Plant 20(2):430\u2013436. https:\/\/doi.org\/10.1111\/j.1399-3054.1967.tb07183.x","journal-title":"Physiol Plant"},{"key":"1731_CR42","doi-asserted-by":"publisher","DOI":"10.1016\/j.scienta.2022.111327","volume":"304","author":"LM Hamze","year":"2022","unstructured":"Hamze LM, Trentacoste ER, Searles PS, Rousseaux MC (2022) Spring reproductive and vegetative phenology of olive (Olea europaea L.) cultivars at different air temperatures along a latitudinal-altitudinal gradient in Argentina. Sci Hortic 304:111327. https:\/\/doi.org\/10.1016\/j.scienta.2022.111327","journal-title":"Sci Hortic"},{"issue":"1","key":"1731_CR43","first-page":"1","volume":"1","author":"MV Hanke","year":"2007","unstructured":"Hanke MV, Flachowsky H, Peil A, H\u00e4ttasch C (2007) No flower no fruit\u2014genetic potentials to trigger flowering in fruit trees. Genes Genomes Genomics 1(1):1\u201320","journal-title":"Genes Genomes Genomics"},{"issue":"1","key":"1731_CR44","doi-asserted-by":"publisher","first-page":"54","DOI":"10.1016\/0040-5809(88)90004-4","volume":"33","author":"WG Hill","year":"1988","unstructured":"Hill WG, Weir BS (1988) Variances and covariances of squared linkage disequilibria in finite populations. Theor Popul Biol 33(1):54\u201378. https:\/\/doi.org\/10.1016\/0040-5809(88)90004-4","journal-title":"Theor Popul Biol"},{"issue":"2","key":"1731_CR45","doi-asserted-by":"publisher","DOI":"10.1093\/gigascience\/giy154","volume":"8","author":"M Huang","year":"2019","unstructured":"Huang M, Liu X, Zhou Y, Summers RM, Zhang Z (2019) BLINK: a package for the next level of genome-wide association studies with both individuals and markers in the millions. Gigascience 8(2):giy154. https:\/\/doi.org\/10.1093\/gigascience\/giy154","journal-title":"Gigascience"},{"issue":"1","key":"1731_CR46","doi-asserted-by":"publisher","DOI":"10.1186\/s12915-020-00881-6","volume":"18","author":"I Julca","year":"2020","unstructured":"Julca I, Marcet-Houben M, Cruz F, G\u00f3mez-Garrido J, Gaut BS, D\u00edez CM et al (2020) Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.). BMC Biol 18(1):148. https:\/\/doi.org\/10.1186\/s12915-020-00881-6","journal-title":"BMC Biol"},{"issue":"7","key":"1731_CR47","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0214703","volume":"14","author":"N Kamal","year":"2019","unstructured":"Kamal N, Och\u00dfner I, Schwandner A, Vieh\u00f6ver P, Hausmann L, T\u00f6pfer R et al (2019) Characterization of genes and alleles involved in the control of flowering time in grapevine. PLoS One 14(7):e0214703. https:\/\/doi.org\/10.1371\/journal.pone.0214703","journal-title":"PLoS One"},{"issue":"19","key":"1731_CR48","doi-asserted-by":"publisher","DOI":"10.3390\/plants13192775","volume":"13","author":"T Kartseva","year":"2024","unstructured":"Kartseva T, Aleksandrov V, Alqudah AM, Schierenbeck M, Tasheva K, B\u00f6rner A, Misheva S (2024) Exploring novel genomic loci and candidate genes associated with plant height in Bulgarian bread wheat via multi-model GWAS. Plants (Basel) 13(19):2775. https:\/\/doi.org\/10.3390\/plants13192775","journal-title":"Plants (Basel)"},{"issue":"1","key":"1731_CR49","doi-asserted-by":"publisher","DOI":"10.1186\/1746-4811-9-29","volume":"9","author":"A Korte","year":"2013","unstructured":"Korte A, Farlow A (2013) The advantages and limitations of trait analysis with GWAS: a review. Plant Methods 9(1):29. https:\/\/doi.org\/10.1186\/1746-4811-9-29","journal-title":"Plant Methods"},{"key":"1731_CR50","doi-asserted-by":"publisher","first-page":"715","DOI":"10.1038\/s41477-017-0007-7","volume":"3","author":"A Kusmec","year":"2017","unstructured":"Kusmec A, Srinivasan S, Nettleton D, Schnable PS (2017) Distinct genetic architectures for phenotype means and plasticities in Zea mays. Nat Plants 3:715\u2013723. https:\/\/doi.org\/10.1038\/s41477-017-0007-7","journal-title":"Nat Plants"},{"issue":"3","key":"1731_CR51","doi-asserted-by":"publisher","first-page":"739","DOI":"10.1093\/jxb\/ery404","volume":"70","author":"RA Laitinen","year":"2019","unstructured":"Laitinen RA, Nikoloski Z (2019) Genetic basis of plasticity in plants. J Exp Bot 70(3):739\u2013745. https:\/\/doi.org\/10.1093\/jxb\/ery404","journal-title":"J Exp Bot"},{"key":"1731_CR52","doi-asserted-by":"publisher","DOI":"10.1186\/s12870-025-07171-9","author":"O Lamoumni","year":"2025","unstructured":"Lamoumni O, Bakkali AE, Abou-Saaid O, Cubry P, Leon L, Delalande M et al (2025) QTL mapping and candidate gene identification of the full flowering date trait in olive trees (Olea europaea L.). BMC Plant Biol. https:\/\/doi.org\/10.1186\/s12870-025-07171-9","journal-title":"BMC Plant Biol"},{"issue":"14","key":"1731_CR53","doi-asserted-by":"publisher","first-page":"1841","DOI":"10.1093\/bioinformatics\/btp328","volume":"25","author":"M Lawrence","year":"2009","unstructured":"Lawrence M, Gentleman R, Carey V (2009) rtracklayer: an R package for interfacing with genome browsers. Bioinformatics 25(14):1841. https:\/\/doi.org\/10.1093\/bioinformatics\/btp328","journal-title":"Bioinformatics"},{"issue":"14","key":"1731_CR54","doi-asserted-by":"publisher","first-page":"1754","DOI":"10.1093\/bioinformatics\/btp324","volume":"25","author":"H Li","year":"2009","unstructured":"Li H, Durbin R (2009) Fast and accurate short read alignment with Burrows\u2013Wheeler transform. Bioinformatics 25(14):1754\u20131760. https:\/\/doi.org\/10.1093\/bioinformatics\/btp324","journal-title":"Bioinformatics"},{"issue":"13","key":"1731_CR55","doi-asserted-by":"publisher","DOI":"10.3390\/plants14131906","volume":"14","author":"J Li","year":"2025","unstructured":"Li J, Jia D, Zhou Z, Du J, Xiao Q, Cao M (2025a) Stability analysis and multi-trait selection of flowering phenology parameters in olive cultivars under multi-environment trials. Plants (Basel) 14(13):1906. https:\/\/doi.org\/10.3390\/plants14131906","journal-title":"Plants (Basel)"},{"issue":"13","key":"1731_CR56","doi-asserted-by":"publisher","DOI":"10.3390\/ijms26136285","volume":"26","author":"R Li","year":"2025","unstructured":"Li R, Li D, Guo Y, Wang Y, Zhang Y, Li L et al (2025b) Genetic dissection of drought tolerance in maize through GWAS of agronomic traits, stress tolerance indices, and phenotypic plasticity. Int J Mol Sci 26(13):6285. https:\/\/doi.org\/10.3390\/ijms26136285","journal-title":"Int J Mol Sci"},{"issue":"2","key":"1731_CR57","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1005767","volume":"12","author":"X Liu","year":"2016","unstructured":"Liu X, Huang M, Fan B, Buckler ES, Zhang Z (2016) Iterative usage of fixed and random effect models for powerful and efficient genome-wide association studies. PLoS Genet 12(2):e1005767. https:\/\/doi.org\/10.1371\/journal.pgen.1005767","journal-title":"PLoS Genet"},{"issue":"8","key":"1731_CR58","doi-asserted-by":"publisher","DOI":"10.1093\/hr\/uhae168","volume":"11","author":"J Lv","year":"2024","unstructured":"Lv J, Jiang C, Wu W, Mao K, Wei Q, Zheng Y et al (2024) The gapless genome assembly and multi-omics analyses unveil a pivotal regulatory mechanism of oil biosynthesis in the olive tree. Hortic Res 11(8):uhae168. https:\/\/doi.org\/10.1093\/hr\/uhae168","journal-title":"Hortic Res"},{"issue":"4","key":"1731_CR59","doi-asserted-by":"publisher","first-page":"676","DOI":"10.1111\/jipb.13017","volume":"63","author":"T Ma","year":"2021","unstructured":"Ma T, Li E, Li LS, Li S, Zhang Y (2021) The Arabidopsis R-SNARE protein YKT61 is essential for gametophyte development. J Integr Plant Biol 63(4):676\u2013694. https:\/\/doi.org\/10.1111\/jipb.13017","journal-title":"J Integr Plant Biol"},{"key":"1731_CR60","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1007\/s11032-021-01240-1","volume":"41","author":"P Malik","year":"2021","unstructured":"Malik P, Kumar J, Singh S, Sharma S, Meher PK, Sharma MK et al (2021) Single-trait, multi-locus and multi-trait GWAS using four different models for yield traits in bread wheat. Mol Breeding 41:1\u201321. https:\/\/doi.org\/10.1007\/s11032-021-01240-1","journal-title":"Mol Breeding"},{"key":"1731_CR61","doi-asserted-by":"publisher","DOI":"10.3389\/fphys.2013.00044","volume":"4","author":"M Malosetti","year":"2013","unstructured":"Malosetti M, Ribaut JM, van Eeuwijk FA (2013) The statistical analysis of multi-environment data: modeling genotype-by-environment interaction and its genetic basis. Front Physiol 4:44. https:\/\/doi.org\/10.3389\/fphys.2013.00044","journal-title":"Front Physiol"},{"issue":"10","key":"1731_CR62","doi-asserted-by":"publisher","first-page":"2276","DOI":"10.1111\/pce.12961","volume":"40","author":"B Mangin","year":"2017","unstructured":"Mangin B, Casadebaig P, Cadic E, Blanchet N, Boniface MC, Carr\u00e8re S et al (2017) Genetic control of plasticity of oil yield for combined abiotic stresses using a joint approach of crop modelling and genome-wide association. Plant Cell Environ 40(10):2276\u20132291. https:\/\/doi.org\/10.1111\/pce.12961","journal-title":"Plant Cell Environ"},{"issue":"1","key":"1731_CR63","doi-asserted-by":"publisher","first-page":"190","DOI":"10.1093\/plphys\/kiae109","volume":"195","author":"R Maple","year":"2024","unstructured":"Maple R, Zhu P, Hepworth J, Wang JW, Dean C (2024) Flowering time: from physiology, through genetics to mechanism. Plant Physiol 195(1):190\u2013212. https:\/\/doi.org\/10.1093\/plphys\/kiae109","journal-title":"Plant Physiol"},{"issue":"9","key":"1731_CR64","doi-asserted-by":"publisher","first-page":"1297","DOI":"10.1101\/gr.107524.110","volume":"20","author":"A McKenna","year":"2010","unstructured":"McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A et al (2010) The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res 20(9):1297\u20131303. https:\/\/doi.org\/10.1101\/gr.107524.110","journal-title":"Genome Res"},{"key":"1731_CR65","doi-asserted-by":"publisher","first-page":"1107718","DOI":"10.3389\/fpls.2023.1107718","volume":"14","author":"S Narawatthana","year":"2023","unstructured":"Narawatthana S, Phansenee Y, Thammasamisorn BO, Vejchasarn P (2023) Multi-model genome-wide association studies of leaf anatomical traits and vein architecture in rice. Front Plant Sci 14:1107718. https:\/\/doi.org\/10.3389\/fpls.2023.1107718","journal-title":"Front Plant Sci"},{"issue":"11","key":"1731_CR66","doi-asserted-by":"publisher","first-page":"184","DOI":"10.1007\/s10681-019-2503-5","volume":"215","author":"JF Navas-Lopez","year":"2019","unstructured":"Navas-Lopez JF, Le\u00f3n L, Rapoport HF, Moreno-Al\u00edas I, Lorite IJ, de la Rosa R (2019) Genotype, environment and their interaction effects on olive tree flowering phenology and flower quality. Euphytica 215(11):184. https:\/\/doi.org\/10.1007\/s10681-019-2503-5","journal-title":"Euphytica"},{"issue":"4","key":"1731_CR67","doi-asserted-by":"publisher","first-page":"562","DOI":"10.1093\/treephys\/tpz111","volume":"41","author":"S Nishiyama","year":"2021","unstructured":"Nishiyama S, Matsushita MC, Yamane H, Honda C, Okada K, Tamada Y et al (2021) Functional and expressional analyses of apple FLC-like in relation to dormancy progress and flower bud development. Tree Physiol 41(4):562\u2013570. https:\/\/doi.org\/10.1093\/treephys\/tpz111","journal-title":"Tree Physiol"},{"key":"1731_CR68","doi-asserted-by":"publisher","DOI":"10.48550\/arXiv.1403.2805","author":"J Ooms","year":"2014","unstructured":"Ooms J (2014) The jsonlite package: A practical and consistent mapping between json data and r objects. arXiv preprint arXiv:1403 2805. https:\/\/doi.org\/10.48550\/arXiv.1403.2805","journal-title":"arXiv preprint arXiv:1403 2805"},{"issue":"1","key":"1731_CR69","doi-asserted-by":"publisher","first-page":"207","DOI":"10.1007\/s00704-013-0892-2","volume":"115","author":"F Orlandi","year":"2014","unstructured":"Orlandi F, Garcia-Mozo H, Dhiab AB, Gal\u00e1n C, Msallem M, Fornaciari M (2014) Olive tree phenology and climate variations in the Mediterranean area over the last two decades. Theor Appl Climatol 115(1):207\u2013218. https:\/\/doi.org\/10.1007\/s00704-013-0892-2","journal-title":"Theor Appl Climatol"},{"key":"1731_CR70","first-page":"501","volume":"18129","author":"H Pages","year":"2013","unstructured":"Pages H, Aboyoun P, Gentleman R, DebRoy S, Pag\u00e8s MH, DataImport D et al (2013) Package \u2018Biostrings\u2019 Bioconductor 18129:501","journal-title":"Package \u2018Biostrings\u2019 Bioconductor"},{"issue":"1","key":"1731_CR71","doi-asserted-by":"publisher","first-page":"209","DOI":"10.1007\/s10681-007-9449-8","volume":"161","author":"HP Piepho","year":"2008","unstructured":"Piepho HP, M\u00f6hring J, Melchinger AE, B\u00fcchse A (2008) BLUP for phenotypic selection in plant breeding and variety testing. Euphytica 161(1):209\u2013228","journal-title":"Euphytica"},{"issue":"7","key":"1731_CR72","doi-asserted-by":"publisher","first-page":"459","DOI":"10.1038\/nrg2813","volume":"11","author":"AL Price","year":"2010","unstructured":"Price AL, Zaitlen NA, Reich D, Patterson N (2010) New approaches to population stratification in genome-wide association studies. Nat Rev Genet 11(7):459\u2013463. https:\/\/doi.org\/10.1038\/nrg2813","journal-title":"Nat Rev Genet"},{"issue":"3","key":"1731_CR73","doi-asserted-by":"publisher","first-page":"559","DOI":"10.1086\/519795","volume":"81","author":"S Purcell","year":"2007","unstructured":"Purcell S, Neale B, Todd-Brown K, Thomas L, Ferreira MA, Bender D et al (2007) PLINK: a tool set for whole-genome association and population-based linkage analyses. Am J Hum Genet 81(3):559\u2013575. https:\/\/doi.org\/10.1086\/519795","journal-title":"Am J Hum Genet"},{"issue":"6","key":"1731_CR74","doi-asserted-by":"publisher","first-page":"1058","DOI":"10.21273\/JASHS.116.6.1058","volume":"116","author":"L Rallo","year":"1991","unstructured":"Rallo L, Martin GC (1991) The role of chilling in releasing olive floral buds from dormancy. J Am Soc Hortic Sci 116(6):1058\u20131062","journal-title":"J Am Soc Hortic Sci"},{"issue":"4","key":"1731_CR75","doi-asserted-by":"publisher","DOI":"10.1111\/ppl.14440","volume":"176","author":"AU Rehman","year":"2024","unstructured":"Rehman AU, Iso-Touru T, Junkers J, Rantanen M, Karhu S, Fischer D et al (2024) Multi-model GWAS reveals key loci for horticultural traits in reconstructed garden strawberry. Physiol Plant 176(4):e14440. https:\/\/doi.org\/10.1111\/ppl.14440","journal-title":"Physiol Plant"},{"issue":"4","key":"1731_CR76","doi-asserted-by":"publisher","DOI":"10.3390\/genes12040545","volume":"12","author":"A Salimonti","year":"2021","unstructured":"Salimonti A, Forgione I, Sirangelo TM, Puccio G, Mauceri A, Mercati F et al (2021) A complex gene network mediated by ethylene signal transduction TFs defines the flower induction and differentiation in Olea europaea L. Genes (Basel) 12(4):545. https:\/\/doi.org\/10.3390\/genes12040545","journal-title":"Genes (Basel)"},{"issue":"2","key":"1731_CR77","doi-asserted-by":"publisher","first-page":"151","DOI":"10.1111\/j.1744-7348.2002.tb00167.x","volume":"140","author":"F Sanz-Cort\u00e9s","year":"2002","unstructured":"Sanz-Cort\u00e9s F, MARTINEZ\u2010CALVO J, Badenes ML, Bleiholder H, Hack H, Ll\u00e1cer G, Meier U (2002) Phenological growth stages of olive trees (Olea europaea). Ann Appl Biol 140(2):151\u2013157. https:\/\/doi.org\/10.1111\/j.1744-7348.2002.tb00167.x","journal-title":"Ann Appl Biol"},{"issue":"4","key":"1731_CR78","doi-asserted-by":"publisher","first-page":"438","DOI":"10.1016\/j.devcel.2014.01.013","volume":"28","author":"C Schuster","year":"2014","unstructured":"Schuster C, Gaillochet C, Medzihradszky A, Busch W, Daum G, Krebs M et al (2014) A regulatory framework for shoot stem cell control integrating metabolic, transcriptional, and phytohormone signals. Dev Cell 28(4):438\u2013449. https:\/\/doi.org\/10.1016\/j.devcel.2014.01.013","journal-title":"Dev Cell"},{"issue":"19","key":"1731_CR79","doi-asserted-by":"publisher","first-page":"3343","DOI":"10.1242\/dev.120444","volume":"142","author":"C Schuster","year":"2015","unstructured":"Schuster C, Gaillochet C, Lohmann JU (2015) Arabidopsis HECATE genes function in phytohormone control during gynoecium development. Development 142(19):3343\u20133350. https:\/\/doi.org\/10.1242\/dev.120444","journal-title":"Development"},{"issue":"7","key":"1731_CR80","doi-asserted-by":"publisher","first-page":"825","DOI":"10.1038\/ng.2314","volume":"44","author":"V Segura","year":"2012","unstructured":"Segura V, Vilhj\u00e1lmsson BJ, Platt A, Korte A, Seren \u00dc, Long Q, Nordborg M (2012) An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations. Nat Genet 44(7):825\u2013830. https:\/\/doi.org\/10.1038\/ng.2314","journal-title":"Nat Genet"},{"issue":"2","key":"1731_CR81","doi-asserted-by":"publisher","first-page":"511","DOI":"10.1111\/nph.14346","volume":"213","author":"RK Singh","year":"2017","unstructured":"Singh RK, Svystun T, AlDahmash B, J\u00f6nsson AM, Bhalerao RP (2017) Photoperiod-and temperature\u2010mediated control of phenology in trees\u2013a molecular perspective. New Phytol 213(2):511\u2013524. https:\/\/doi.org\/10.1111\/nph.14346","journal-title":"New Phytol"},{"issue":"1","key":"1731_CR82","doi-asserted-by":"publisher","first-page":"7","DOI":"10.1186\/s43897-021-00015-8","volume":"1","author":"X Sun","year":"2021","unstructured":"Sun X, Qin M, Yu Q, Huang Z, Xiao Y, Li Y et al (2021) Molecular understanding of postharvest flower opening and senescence. Mol Hortic 1(1):7. https:\/\/doi.org\/10.1186\/s43897-021-00015-8","journal-title":"Mol Hortic"},{"issue":"3","key":"1731_CR83","doi-asserted-by":"publisher","first-page":"1346","DOI":"10.1111\/nph.14220","volume":"213","author":"MP Thoen","year":"2017","unstructured":"Thoen MP, Davila Olivas NH, Kloth KJ, Coolen S, Huang PP, Aarts MG et al (2017) Genetic architecture of plant stress resistance: multi-trait genome\u2010wide association mapping. New Phytol 213(3):1346\u20131362. https:\/\/doi.org\/10.1111\/nph.14220","journal-title":"New Phytol"},{"key":"1731_CR84","doi-asserted-by":"publisher","unstructured":"Urrestarazu J, Muranty H, Denanc\u00e9 C, Leforestier D, Ravon E, Guyader A et al (2017) Genome-wide association mapping of flowering and ripening periods in apple. Front Plant Sci 8:1923. https:\/\/doi.org\/10.3389\/fpls.2017.01923","DOI":"10.3389\/fpls.2017.01923"},{"key":"1731_CR85","doi-asserted-by":"publisher","first-page":"2","DOI":"10.3390\/ijms21030921","volume":"3","author":"J Wang","year":"2023","unstructured":"Wang J, Ding J (2023) Molecular mechanisms of flowering phenology in trees. Forestry Res 3:2. https:\/\/doi.org\/10.3390\/ijms21030921","journal-title":"Forestry Res"},{"issue":"2","key":"1731_CR86","doi-asserted-by":"publisher","first-page":"323","DOI":"10.1093\/mp\/ssn078","volume":"2","author":"Z Wang","year":"2009","unstructured":"Wang Z, Xing S, Birkenbihl RP, Zachgo S (2009) Conserved functions of Arabidopsis and rice CC-type glutaredoxins in flower development and pathogen response. Mol Plant 2(2):323\u2013335. https:\/\/doi.org\/10.1093\/mp\/ssn078","journal-title":"Mol Plant"},{"key":"1731_CR87","doi-asserted-by":"publisher","DOI":"10.3390\/ijms21030921","author":"J Wang","year":"2020","unstructured":"Wang J, Gao Z, Li H, Jiu S, Qu Y, Wang L et al (2020) Dormancy-associated MADS-box (DAM) genes influence chilling requirement of sweet cherries and co-regulate flower development with SOC1 gene. Int J Mol Sci. https:\/\/doi.org\/10.3390\/ijms21030921","journal-title":"Int J Mol Sci"},{"issue":"4","key":"1731_CR88","doi-asserted-by":"publisher","first-page":"2085","DOI":"10.1534\/genetics.116.198424","volume":"206","author":"BS Weir","year":"2017","unstructured":"Weir BS, Goudet J (2017) A unified characterization of population structure and relatedness. Genetics 206(4):2085\u20132103. https:\/\/doi.org\/10.1534\/genetics.116.198424","journal-title":"Genetics"},{"issue":"12","key":"1731_CR89","doi-asserted-by":"publisher","first-page":"519","DOI":"10.1016\/j.tig.2010.09.001","volume":"26","author":"F Wellmer","year":"2010","unstructured":"Wellmer F, Riechmann JL (2010) Gene networks controlling the initiation of flower development. Trends Genet 26(12):519\u2013527. https:\/\/doi.org\/10.1016\/j.tig.2010.09.001","journal-title":"Trends Genet"},{"key":"1731_CR90","unstructured":"Wickham H, Wickham MH (2022) Package \u2018httr'.The Comprehensive R Archive Network"},{"issue":"2","key":"1731_CR91","doi-asserted-by":"publisher","first-page":"519","DOI":"10.1534\/g3.117.300300","volume":"8","author":"A Xavier","year":"2018","unstructured":"Xavier A, Jarquin D, Howard R, Ramasubramanian V, Specht JE, Graef GL et al (2018) Genome-wide analysis of grain yield stability and environmental interactions in a multiparental soybean population. G3: Genes Genomes Genet 8(2):519\u2013529. https:\/\/doi.org\/10.1534\/g3.117.300300","journal-title":"G3: Genes Genomes Genet"},{"issue":"5","key":"1731_CR92","doi-asserted-by":"publisher","first-page":"790","DOI":"10.1111\/j.1365-313X.2007.03375.x","volume":"53","author":"S Xing","year":"2008","unstructured":"Xing S, Zachgo S (2008) ROXY1 and ROXY2, two Arabidopsis glutaredoxin genes, are required for anther development. Plant J 53(5):790\u2013801. https:\/\/doi.org\/10.1111\/j.1365-313X.2007.03375.x","journal-title":"Plant J"},{"key":"1731_CR93","doi-asserted-by":"publisher","DOI":"10.1242\/dev.01725","author":"S Xing","year":"2005","unstructured":"Xing S, Rosso MG, Zachgo S (2005) ROXY1, a member of the plant glutaredoxin family, is required for petal development in Arabidopsis thaliana. Development. https:\/\/doi.org\/10.1242\/dev.01725","journal-title":"Development"},{"issue":"12","key":"1731_CR94","doi-asserted-by":"publisher","first-page":"997","DOI":"10.1038\/s41477-018-0301-z","volume":"4","author":"S Xu","year":"2018","unstructured":"Xu S, Chong K (2018) Remembering winter through vernalisation. Nat Plants 4(12):997\u20131009. https:\/\/doi.org\/10.1038\/s41477-018-0301-z","journal-title":"Nat Plants"},{"issue":"3","key":"1731_CR95","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1006663","volume":"13","author":"Q Yan","year":"2017","unstructured":"Yan Q, Xia X, Sun Z, Fang Y (2017) Depletion of Arabidopsis SC35 and SC35-like serine\/arginine-rich proteins affects the transcription and splicing of a subset of genes. PLoS Genet 13(3):e1006663. https:\/\/doi.org\/10.1371\/journal.pgen.1006663","journal-title":"PLoS Genet"},{"issue":"7","key":"1731_CR96","doi-asserted-by":"publisher","first-page":"807","DOI":"10.1038\/ejhg.2011.39","volume":"19","author":"J Yang","year":"2011","unstructured":"Yang J, Weedon MN, Purcell S, Lettre G, Estrada K, Willer CJ et al (2011) Genomic inflation factors under polygenic inheritance. Eur J Hum Genet 19(7):807\u2013812. https:\/\/doi.org\/10.1038\/ejhg.2011.39","journal-title":"Eur J Hum Genet"},{"issue":"4","key":"1731_CR97","doi-asserted-by":"publisher","first-page":"311","DOI":"10.1007\/s00497-016-0296-4","volume":"29","author":"A Yarur","year":"2016","unstructured":"Yarur A, Soto E, Le\u00f3n G, Almeida AM (2016) The sweet cherry (Prunus avium) FLOWERING LOCUS T gene is expressed during floral bud determination and can promote flowering in a winter-annual Arabidopsis accession. Plant Reprod 29(4):311\u2013322. https:\/\/doi.org\/10.1007\/s00497-016-0296-4","journal-title":"Plant Reprod"},{"issue":"4","key":"1731_CR98","doi-asserted-by":"publisher","first-page":"619","DOI":"10.1016\/j.gpb.2020.10.007","volume":"19","author":"L Yin","year":"2021","unstructured":"Yin L, Zhang H, Tang Z, Xu J, Yin D, Zhang Z et al (2021) rMVP: a memory-efficient, visualization-enhanced, and parallel-accelerated tool for genome-wide association study. Genom Proteom Bioinform 19(4):619\u2013628. https:\/\/doi.org\/10.1016\/j.gpb.2020.10.007","journal-title":"Genom Proteom Bioinform"},{"issue":"2","key":"1731_CR99","doi-asserted-by":"publisher","first-page":"203","DOI":"10.1038\/ng1702","volume":"38","author":"J Yu","year":"2006","unstructured":"Yu J, Pressoir G, Briggs WH, Vroh Bi I, Yamasaki M, Doebley JF et al (2006) A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nat Genet 38(2):203\u2013208. https:\/\/doi.org\/10.1038\/ng1702","journal-title":"Nat Genet"},{"key":"1731_CR100","doi-asserted-by":"publisher","first-page":"180","DOI":"10.3389\/fpls.2020.00180","volume":"11","author":"J Yu","year":"2020","unstructured":"Yu J, Conrad AO, Decroocq V, Zhebentyayeva T, Williams DE, Bennett D et al (2020) Distinctive gene expression patterns define endodormancy to ecodormancy transition in apricot and peach. Front Plant Sci 11:180. https:\/\/doi.org\/10.3389\/fpls.2020.00180","journal-title":"Front Plant Sci"},{"key":"1731_CR101","doi-asserted-by":"publisher","DOI":"10.3389\/fpls.2021.690841","volume":"12","author":"M Zhang","year":"2021","unstructured":"Zhang M, Yang Q, Yuan X, Yan X, Wang J, Cheng T, Zhang Q (2021) Integrating genome-wide association analysis with transcriptome sequencing to identify candidate genes related to blooming time in Prunus mume. Front Plant Sci 12:690841. https:\/\/doi.org\/10.3389\/fpls.2021.690841","journal-title":"Front Plant Sci"},{"issue":"7","key":"1731_CR102","doi-asserted-by":"publisher","first-page":"821","DOI":"10.1038\/ng.2310","volume":"44","author":"X Zhou","year":"2012","unstructured":"Zhou X, Stephens M (2012) Genome-wide efficient mixed-model analysis for association studies. Nat Genet 44(7):821\u2013824. https:\/\/doi.org\/10.1038\/ng.2310","journal-title":"Nat Genet"},{"issue":"4","key":"1731_CR103","doi-asserted-by":"publisher","first-page":"407","DOI":"10.1038\/nmeth.2848","volume":"11","author":"X Zhou","year":"2014","unstructured":"Zhou X, Stephens M (2014) Efficient multivariate linear mixed model algorithms for genome-wide association studies. Nat Methods 11(4):407\u2013409. https:\/\/doi.org\/10.1038\/nmeth.2848","journal-title":"Nat Methods"},{"issue":"1","key":"1731_CR104","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0295043","volume":"19","author":"L Zunino","year":"2024","unstructured":"Zunino L, Cubry P, Sarah G, Mournet P, El Bakkali A, Aqbouch L et al (2024) Genomic evidence of genuine wild versus admixed olive populations evolving in the same natural environments in western Mediterranean basin. PLoS One 19(1):e0295043. https:\/\/doi.org\/10.1371\/journal.pone.0295043","journal-title":"PLoS One"}],"container-title":["Molecular Breeding"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s11032-026-01731-z.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s11032-026-01731-z","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s11032-026-01731-z.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,10,24]],"date-time":"2026-10-24T22:02:06Z","timestamp":1792879326000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s11032-026-01731-z"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,10]]},"references-count":104,"journal-issue":{"issue":"10","published-print":{"date-parts":[[2026,10]]}},"alternative-id":["1731"],"URL":"https:\/\/doi.org\/10.1007\/s11032-026-01731-z","relation":{},"ISSN":["1380-3743","1572-9788"],"issn-type":[{"value":"1380-3743","type":"print"},{"value":"1572-9788","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,10]]},"assertion":[{"value":"11 April 2026","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"9 October 2026","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"13 October 2026","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"Not applicable.","order":1,"name":"Ethics","label":"Ethics approval and consent to participate","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"Not applicable.","order":2,"name":"Ethics","label":"Consent for publication","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"The authors declare no competing interests.","order":3,"name":"Ethics","label":"Competing interests","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"Not applicable.","order":4,"name":"Ethics","label":"Clinical trial number","group":{"name":"EthicsHeading","label":"Declarations"}}],"article-number":"106"}}