{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,2]],"date-time":"2025-11-02T16:42:22Z","timestamp":1762101742411,"version":"3.40.3"},"reference-count":71,"publisher":"Springer Science and Business Media LLC","issue":"9","license":[{"start":{"date-parts":[[2015,8,6]],"date-time":"2015-08-06T00:00:00Z","timestamp":1438819200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2015,8,6]],"date-time":"2015-08-06T00:00:00Z","timestamp":1438819200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Mol Biol Rep"],"published-print":{"date-parts":[[2015,9]]},"DOI":"10.1007\/s11033-015-3916-4","type":"journal-article","created":{"date-parts":[[2015,8,5]],"date-time":"2015-08-05T06:49:09Z","timestamp":1438757349000},"page":"1377-1390","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":15,"title":["Unique ability of pandemic influenza to downregulate the genes involved in neuronal disorders"],"prefix":"10.1007","volume":"42","author":[{"given":"Esmaeil","family":"Ebrahimie","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zahra","family":"Nurollah","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mansour","family":"Ebrahimi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Farhid","family":"Hemmatzadeh","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jagoda","family":"Ignjatovic","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2015,8,6]]},"reference":[{"key":"3916_CR1","doi-asserted-by":"publisher","first-page":"e96320","DOI":"10.1371\/journal.pone.0096320","volume":"9","author":"A Alisoltani","year":"2014","unstructured":"Alisoltani A, Fallahi H, Ebrahimi M, Ebrahimi M, Ebrahimie E (2014) Prediction of potential cancer-risk regions based on transcriptome data: towards a comprehensive view. PLoS One 9:e96320","journal-title":"PLoS One"},{"key":"3916_CR2","doi-asserted-by":"publisher","first-page":"371","DOI":"10.1016\/S0896-6273(00)80981-2","volume":"20","author":"CM Armstrong","year":"1998","unstructured":"Armstrong CM, Hille B (1998) Voltage-gated ion channels and electrical excitability. Neuron 20:371\u2013380","journal-title":"Neuron"},{"key":"3916_CR3","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1038\/75556","volume":"25","author":"M Ashburner","year":"2000","unstructured":"Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT (2000) Gene ontology: tool for the unification of biology. Nat Genet 25:25\u201329","journal-title":"Nat Genet"},{"key":"3916_CR4","doi-asserted-by":"publisher","first-page":"122","DOI":"10.1016\/j.gene.2013.03.045","volume":"521","author":"MR Bakhtiarizadeh","year":"2013","unstructured":"Bakhtiarizadeh MR, Moradi-Shahrbabak M, Ebrahimie E (2013) Underlying functional genomics of fat deposition in adipose tissue. Gene 521:122\u2013128","journal-title":"Gene"},{"key":"3916_CR5","doi-asserted-by":"publisher","first-page":"105","DOI":"10.1007\/s13258-013-0145-x","volume":"36","author":"MR Bakhtiarizadeh","year":"2014","unstructured":"Bakhtiarizadeh MR, Moradi-Shahrbabak M, Ebrahimie E (2014) Transcriptional regulatory network analysis of the over-expressed genes in adipose tissue. Genes Genomics 36:105\u2013117","journal-title":"Genes Genomics"},{"key":"3916_CR6","doi-asserted-by":"publisher","first-page":"56","DOI":"10.1038\/nrg2918","volume":"12","author":"A-L Barab\u00e1si","year":"2011","unstructured":"Barab\u00e1si A-L, Gulbahce N, Loscalzo J (2011) Network medicine: a network-based approach to human disease. Nat Rev Genet 12:56\u201368","journal-title":"Nat Rev Genet"},{"key":"3916_CR7","first-page":"181","volume":"3","author":"S Baseri","year":"2011","unstructured":"Baseri S, Towhidi M, Ebrahimie E (2011) A modified efficient empirical bayes regression model for predicting phenomena with a large number of independent variables and fewer observations; examples of its application in human disease, protein bioinformatics, and microarray gene expression profiling. Adv Stud Biol 3:181\u2013204","journal-title":"Adv Stud Biol"},{"key":"3916_CR8","doi-asserted-by":"publisher","first-page":"707","DOI":"10.1002\/ajmg.b.30667","volume":"147B","author":"MP Boks","year":"2008","unstructured":"Boks MP, Hoogendoorn M, Jungerius BJ, Bakker SC, Sommer IE, Sinke RJ, Ophoff RA, Kahn RS (2008) Do mood symptoms subdivide the schizophrenia phenotype? Association of the GMP6A gene with a depression subgroup. Am J Med Genet B 147B:707\u2013711","journal-title":"Am J Med Genet B"},{"key":"3916_CR9","doi-asserted-by":"publisher","first-page":"1511","DOI":"10.1007\/s00431-010-1255-y","volume":"169","author":"C Calitri","year":"2010","unstructured":"Calitri C, Gabiano C, Garazzino S, Pinon M, Zoppo M, Cuozzo M, Scolfaro C, Tovo PA (2010) Clinical features of hospitalised children with 2009 H1N1 influenza virus infection. Eur J Pediatr 169:1511\u20131515","journal-title":"Eur J Pediatr"},{"key":"3916_CR10","doi-asserted-by":"publisher","first-page":"1032","DOI":"10.1038\/nature03985","volume":"437","author":"SE Calvano","year":"2005","unstructured":"Calvano SE, Xiao W, Richards DR, Felciano RM, Baker HV, Cho RJ, Chen RO, Brownstein BH, Cobb JP, Tschoeke SK, Miller-Graziano C, Moldawer LL, Mindrinos MN, Davis RW, Tompkins RG, Lowry SF, Collab Large Scale, Respose, Host Response to I (2005) A network-based analysis of systemic inflammation in humans. Nature 437:1032\u20131037","journal-title":"Nature"},{"key":"3916_CR11","doi-asserted-by":"publisher","first-page":"898","DOI":"10.1016\/S0006-291X(02)00774-X","volume":"295","author":"PH Choung","year":"2002","unstructured":"Choung PH, Seo BM, Chung CP, Yamada KM, Jang JH (2002) Synergistic activity of fibronectin and fibroblast growth factor receptors on neuronal adhesion and neurite extension through extracellular signal-regulated kinase pathway. Biochem Biophys Res Commun 295:898\u2013902","journal-title":"Biochem Biophys Res Commun"},{"key":"3916_CR12","doi-asserted-by":"publisher","first-page":"237","DOI":"10.1196\/annals.1344.021","volume":"1053","author":"Z Chu","year":"2005","unstructured":"Chu Z, Sun Y, Kuan CY, Grabowski GA, Qi X (2005) Saposin C: neuronal effect and CNS delivery by liposomes. Ann N Y Acad Sci 1053:237\u2013246","journal-title":"Ann N Y Acad Sci"},{"key":"3916_CR13","doi-asserted-by":"publisher","first-page":"D258","DOI":"10.1093\/nar\/gkh036","volume":"32","author":"Consortium GO","year":"2004","unstructured":"Consortium GO (2004) The Gene Ontology (GO) database and informatics resource. Nucleic Acids Res 32:D258\u2013D261","journal-title":"Nucleic Acids Res"},{"key":"3916_CR14","doi-asserted-by":"publisher","first-page":"e3659","DOI":"10.1371\/journal.pone.0003659","volume":"4","author":"B Cooper","year":"2009","unstructured":"Cooper B, Fuchs E, Fl\u00fcgge G (2009) Expression of the axonal membrane glycoprotein M6a is regulated by chronic stress. PLoS One 4:e3659","journal-title":"PLoS One"},{"key":"3916_CR15","doi-asserted-by":"publisher","first-page":"1340","DOI":"10.1002\/humu.22117","volume":"33","author":"M Cruts","year":"2012","unstructured":"Cruts M, Theuns J, Van Broeckhoven C (2012) Locus-specific mutation databases for neurodegenerative brain diseases. Hum Mutat 33:1340\u20131344","journal-title":"Hum Mutat"},{"key":"3916_CR16","doi-asserted-by":"publisher","first-page":"1984","DOI":"10.1212\/WNL.0b013e3181a92c25","volume":"72","author":"MJ D\u2019Netto","year":"2009","unstructured":"D\u2019Netto MJ, Ward H, Morrison KM, Ramagopalan SV, Dyment DA, DeLuca GC, Handunnetthi L, Sadovnick AD, Ebers GC (2009) Risk alleles for multiple sclerosis in multiplex families. Neurology 72:1984\u20131988","journal-title":"Neurology"},{"key":"3916_CR17","doi-asserted-by":"publisher","first-page":"b5213","DOI":"10.1136\/bmj.b5213","volume":"339","author":"LJ Donaldson","year":"2009","unstructured":"Donaldson LJ, Rutter PD, Ellis BM, Greaves FEC, Mytton OT, Pebody RG, Yardley IE (2009) Mortality from pandemic A\/H1N1 2009 influenza in England: public health surveillance study. BMJ 339:b5213","journal-title":"BMJ"},{"key":"3916_CR18","doi-asserted-by":"publisher","first-page":"e90885","DOI":"10.1371\/journal.pone.0090885","volume":"9","author":"M Ebrahimie","year":"2014","unstructured":"Ebrahimie M, Esmaeili F, Cheraghi S, Houshmand F, Shabani L, Ebrahimie E (2014) Efficient and simple production of insulin-producing cells from embryonal carcinoma stem cells using mouse neonate pancreas extract, as a natural inducer. PloS one 9:e90885","journal-title":"PloS one"},{"key":"3916_CR19","doi-asserted-by":"publisher","first-page":"e254","DOI":"10.1038\/tp.2013.28","volume":"3","author":"A El-Kordi","year":"2013","unstructured":"El-Kordi A, K\u00e4stner A, Grube S, Klugmann M, Begemann M, Sperling S, Hammerschmidt K, Hammer C, Stepniak B, Patzig J (2013) A single gene defect causing claustrophobia. Transl Psychiatr 3:e254","journal-title":"Transl Psychiatr"},{"key":"3916_CR20","doi-asserted-by":"publisher","first-page":"367","DOI":"10.1016\/j.cell.2005.10.038","volume":"124","author":"AG Eldridge","year":"2006","unstructured":"Eldridge AG, Loktev AV, Hansen DV, Verschuren EW, Reimann JD, Jackson PK (2006) The evi5 oncogene regulates cyclin accumulation by stabilizing the anaphase-promoting complex inhibitor emi1. Cell 124:367\u2013380","journal-title":"Cell"},{"key":"3916_CR21","doi-asserted-by":"publisher","first-page":"91","DOI":"10.1002\/syn.20162","volume":"57","author":"SH Fatemi","year":"2005","unstructured":"Fatemi SH, Pearce DA, Brooks AI, Sidwell RW (2005) Prenatal viral infection in mouse causes differential expression of genes in brains of mouse progeny: a potential animal model for schizophrenia and autism. Synapse 57:91\u201399","journal-title":"Synapse"},{"key":"3916_CR22","doi-asserted-by":"publisher","first-page":"126","DOI":"10.1186\/1471-2105-7-126","volume":"7","author":"RJ Fox","year":"2006","unstructured":"Fox RJ, Dimmic MW (2006) A two-sample Bayesian t-test for microarray data. BMC Bioinform 7:126","journal-title":"BMC Bioinform"},{"key":"3916_CR23","doi-asserted-by":"publisher","first-page":"557","DOI":"10.1016\/S0955-0674(02)00365-4","volume":"14","author":"M Frank","year":"2002","unstructured":"Frank M, Kemler R (2002) Protocadherins. Curr Opin Cell Biol 14:557\u2013562","journal-title":"Curr Opin Cell Biol"},{"key":"3916_CR24","doi-asserted-by":"publisher","DOI":"10.1101\/004911","author":"M Fruzangohar","year":"2014","unstructured":"Fruzangohar M, Ebrahimie E, Adelson DL (2014) Application of Global transcriptome data in gene ontology classification and construction of a gene ontology interaction network. bioRxiv. doi:10.1101\/004911","journal-title":"bioRxiv"},{"key":"3916_CR25","doi-asserted-by":"publisher","first-page":"e58759","DOI":"10.1371\/journal.pone.0058759","volume":"8","author":"M Fruzangohar","year":"2013","unstructured":"Fruzangohar M, Ebrahimie E, Ogunniyi AD, Mahdi LK, Paton JC, Adelson DL (2013) Comparative GO: a web application for comparative gene ontology and gene ontology-based gene selection in bacteria. PLoS One 8:e58759","journal-title":"PLoS One"},{"key":"3916_CR26","doi-asserted-by":"publisher","first-page":"187","DOI":"10.1016\/0896-6273(92)90158-A","volume":"9","author":"B Hille","year":"1992","unstructured":"Hille B (1992) G protein-coupled mechanisms and nervous signaling. Neuron 9:187\u2013195","journal-title":"Neuron"},{"key":"3916_CR27","unstructured":"Hipfel R, Hanes J, Von Der Kammer H, Pohlner J (2003) Camp-regulated phosphoprotein for diagnostic and therapeutic use in neurodegenerative diseases. Google Patents"},{"key":"3916_CR28","doi-asserted-by":"publisher","first-page":"e49931","DOI":"10.1371\/journal.pone.0049931","volume":"7","author":"B Hosseinpour","year":"2012","unstructured":"Hosseinpour B, Hajihoseini V, Kashfi R, Ebrahimie E, Hemmatzadeh F (2012) Protein interaction network of arabidopsis thaliana female gametophyte development identifies novel proteins and relations. PLoS One 7:e49931","journal-title":"PLoS One"},{"key":"3916_CR29","doi-asserted-by":"publisher","first-page":"214","DOI":"10.1038\/nature12213","volume":"499","author":"MS Lawrence","year":"2013","unstructured":"Lawrence MS, Stojanov P, Polak P, Kryukov GV, Cibulskis K, Sivachenko A, Carter SL, Stewart C, Mermel CH, Roberts SA (2013) Mutational heterogeneity in cancer and the search for new cancer-associated genes. Nature 499:214\u2013218","journal-title":"Nature"},{"key":"3916_CR30","doi-asserted-by":"publisher","first-page":"139","DOI":"10.3201\/eid1601.090007","volume":"16","author":"N Lee","year":"2010","unstructured":"Lee N, Wong CK, Chan PK, Lindegardh N, White NJ, Hayden FG, Wong EH, Wong KS, Cockram CS, Sung JJ, Hui DS (2010) Acute encephalopathy associated with influenza A infection in adults. Emerg Infect Dis 16:139\u2013142","journal-title":"Emerg Infect Dis"},{"key":"3916_CR31","doi-asserted-by":"publisher","first-page":"4","DOI":"10.1186\/1750-1326-3-4","volume":"3","author":"QY Liu","year":"2008","unstructured":"Liu QY, Lei JX, Sikorska M, Liu R (2008) A novel brain-enriched E3 ubiquitin ligase RNF182 is up regulated in the brains of Alzheimer\u2019s patients and targets ATP6V0C for degradation. Mol Neurodegener 3:4","journal-title":"Mol Neurodegener"},{"key":"3916_CR32","doi-asserted-by":"publisher","first-page":"3125","DOI":"10.1242\/dev.022236","volume":"135","author":"Y Liu","year":"2008","unstructured":"Liu Y, Gervasi C, Szaro BG (2008) A crucial role for hnRNP K in axon development in Xenopus laevis. Development 135:3125\u20133135","journal-title":"Development"},{"key":"3916_CR33","doi-asserted-by":"publisher","first-page":"53","DOI":"10.1667\/RR1389.1","volume":"171","author":"XR Lowe","year":"2009","unstructured":"Lowe XR, Bhattacharya S, Marchetti F, Wyrobek AJ (2009) Early brain response to low-dose radiation exposure involves molecular networks and pathways associated with cognitive functions, advanced aging and Alzheimer\u2019s disease. Radiat Res 171:53\u201365","journal-title":"Radiat Res"},{"key":"3916_CR34","doi-asserted-by":"publisher","first-page":"e70862","DOI":"10.1371\/journal.pone.0070862","volume":"8","author":"LK Mahdi","year":"2013","unstructured":"Mahdi LK, Ebrahimie E, Adelson DL, Paton JC, Ogunniyi AD (2013) A transcription factor contributes to pathogenesis and virulence in Streptococcus pneumoniae. PLoS One 8:e70862","journal-title":"PLoS One"},{"key":"3916_CR35","doi-asserted-by":"publisher","first-page":"S5","DOI":"10.1186\/1471-2105-8-S6-S5","volume":"8","author":"F Markowetz","year":"2007","unstructured":"Markowetz F, Spang R (2007) Inferring cellular networks\u2014a review. BMC Bioinform 8:S5","journal-title":"BMC Bioinform"},{"key":"3916_CR36","doi-asserted-by":"publisher","first-page":"521","DOI":"10.1016\/j.cell.2008.07.020","volume":"134","author":"A Marson","year":"2008","unstructured":"Marson A, Levine SS, Cole MF, Frampton GM, Brambrink T, Johnstone S, Guenther MG, Johnston WK, Wernig M, Newman J, Calabrese JM, Dennis LM, Volkert TL, Gupta S, Love J, Hannett N, Sharp PA, Bartel DP, Jaenisch R, Young RA (2008) Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells. Cell 134:521\u2013533","journal-title":"Cell"},{"key":"3916_CR37","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/0306-9877(85)90034-9","volume":"16","author":"CP Maurizi","year":"1985","unstructured":"Maurizi CP (1985) Why was the 1918 influenza pandemic so lethal? The possible role of a neurovirulent neuraminidase. Med Hypotheses 16:1\u20135","journal-title":"Med Hypotheses"},{"key":"3916_CR38","doi-asserted-by":"publisher","first-page":"560","DOI":"10.1016\/j.ajhg.2010.09.008","volume":"87","author":"HM McLaughlin","year":"2010","unstructured":"McLaughlin HM, Sakaguchi R, Liu C, Igarashi T, Pehlivan D, Chu K, Iyer R, Cruz P, Cherukuri PF, Hansen NF, Mullikin JC, Biesecker LG, Wilson TE, Ionasescu V, Nicholson G, Searby C, Talbot K, Vance JM, Zuchner S, Szigeti K, Lupski JR, Hou YM, Green ED, Antonellis A (2010) Compound heterozygosity for loss-of-function lysyl-tRNA synthetase mutations in a patient with peripheral neuropathy. Am J Hum Genet 87:560\u2013566","journal-title":"Am J Hum Genet"},{"key":"3916_CR39","doi-asserted-by":"publisher","first-page":"629","DOI":"10.1089\/scd.2008.0215","volume":"18","author":"H Michibata","year":"2009","unstructured":"Michibata H, Okuno T, Konishi N, Kyono K, Wakimoto K, Aoki K, Kondo Y, Takata K, Kitamura Y, Taniguchi T (2009) Human GPM6A is associated with differentiation and neuronal migration of neurons derived from human embryonic stem cells. Stem Cells Dev 18:629\u2013639","journal-title":"Stem Cells Dev"},{"key":"3916_CR40","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1016\/j.brainres.2005.12.056","volume":"1073\u20131074","author":"CL Miller","year":"2006","unstructured":"Miller CL, Llenos IC, Dulay JR, Weis S (2006) Upregulation of the initiating step of the kynurenine pathway in postmortem anterior cingulate cortex from individuals with schizophrenia and bipolar disorder. Brain Res 1073\u20131074:25\u201337","journal-title":"Brain Res"},{"key":"3916_CR41","doi-asserted-by":"publisher","first-page":"904","DOI":"10.1038\/nature03063","volume":"432","author":"CE Mills","year":"2004","unstructured":"Mills CE, Robins JM, Lipsitch M (2004) Transmissibility of 1918 pandemic influenza. Nature 432:904\u2013906","journal-title":"Nature"},{"key":"3916_CR42","doi-asserted-by":"publisher","first-page":"1241","DOI":"10.3346\/jkms.2012.27.10.1241","volume":"27","author":"IS Moon","year":"2012","unstructured":"Moon IS, Lee HJ, Park IS (2012) Dendritic eIF4E-binding protein 1 (eIF4E-BP1) mRNA is upregulated by neuronal activation. J Korean Med Sci 27:1241\u20131247","journal-title":"J Korean Med Sci"},{"key":"3916_CR43","doi-asserted-by":"publisher","first-page":"163","DOI":"10.1006\/viro.2001.1029","volume":"287","author":"I Mori","year":"2001","unstructured":"Mori I, Hossain MJ, Takeda K, Okamura H, Imai Y, Kohsaka S, Kimura Y (2001) Impaired microglial activation in the brain of IL-18-gene-disrupted mice after neurovirulent influenza A virus infection. Virology 287:163\u2013170","journal-title":"Virology"},{"key":"3916_CR44","doi-asserted-by":"publisher","first-page":"2155","DOI":"10.1093\/bioinformatics\/btg290","volume":"19","author":"A Nikitin","year":"2003","unstructured":"Nikitin A, Egorov S, Daraselia N, Mazo I (2003) Pathway studio\u2014the analysis and navigation of molecular networks. Bioinformatics 19:2155\u20132157","journal-title":"Bioinformatics"},{"key":"3916_CR45","doi-asserted-by":"publisher","first-page":"394","DOI":"10.1126\/science.1224631","volume":"338","author":"G Novarino","year":"2012","unstructured":"Novarino G, El-Fishawy P, Kayserili H, Meguid NA, Scott EM, Schroth J, Silhavy JL, Kara M, Khalil RO, Ben-Omran T, Ercan-Sencicek AG, Hashish AF, Sanders SJ, Gupta AR, Hashem HS, Matern D, Gabriel S, Sweetman L, Rahimi Y, Harris RA, State MW, Gleeson JG (2012) Mutations in BCKD-kinase lead to a potentially treatable form of autism with epilepsy. Science 338:394\u2013397","journal-title":"Science"},{"key":"3916_CR46","doi-asserted-by":"publisher","first-page":"1699","DOI":"10.1093\/bioinformatics\/btg207","volume":"19","author":"S Novichkova","year":"2003","unstructured":"Novichkova S, Egorov S, Daraselia N (2003) MedScan, a natural language processing engine for MEDLINE abstracts. Bioinformatics 19:1699\u20131706","journal-title":"Bioinformatics"},{"key":"3916_CR47","doi-asserted-by":"publisher","first-page":"D1014","DOI":"10.1093\/nar\/gks1014","volume":"41","author":"T Obayashi","year":"2013","unstructured":"Obayashi T, Okamura Y, Ito S, Tadaka S, Motoike IN, Kinoshita K (2013) COXPRESdb: a database of comparative gene coexpression networks of eleven species for mammals. Nucleic Acids Res 41:D1014\u2013D1020","journal-title":"Nucleic Acids Res"},{"key":"3916_CR48","doi-asserted-by":"publisher","first-page":"402","DOI":"10.1016\/j.bbrc.2009.05.064","volume":"385","author":"C Pan","year":"2009","unstructured":"Pan C, Wang G, Liao M, Zhang G-H, Jiang S (2009) High genetic and antigenic similarity between a swine H3N2 influenza A virus and a prior human influenza vaccine virus: a possible immune pressure-driven cross-species transmission. Biochem Biophys Res Commun 385:402\u2013407","journal-title":"Biochem Biophys Res Commun"},{"key":"3916_CR49","doi-asserted-by":"publisher","first-page":"11","DOI":"10.1016\/j.neulet.2008.08.017","volume":"444","author":"T Pfuhl","year":"2008","unstructured":"Pfuhl T, Mamiani A, Durr M, Welter S, Stieber J, Ankara J, Liss M, Dobner T, Schmitt A, Falkai P, Kremmer E, Jung V, Barth S, Grasser FA (2008) The LARK\/RBM4a protein is highly expressed in cerebellum as compared to cerebrum. Neurosci Lett 444:11\u201315","journal-title":"Neurosci Lett"},{"key":"3916_CR50","doi-asserted-by":"publisher","first-page":"469","DOI":"10.1172\/JCI0214192","volume":"109","author":"J Pohlenz","year":"2002","unstructured":"Pohlenz J, Dumitrescu A, Zundel D, Martine U, Schonberger W, Koo E, Weiss RE, Cohen RN, Kimura S, Refetoff S (2002) Partial deficiency of thyroid transcription factor 1 produces predominantly neurological defects in humans and mice. J Clin Invest 109:469\u2013473","journal-title":"J Clin Invest"},{"key":"3916_CR51","doi-asserted-by":"publisher","first-page":"147","DOI":"10.1016\/j.jneuroim.2011.01.001","volume":"233","author":"Z Ren","year":"2011","unstructured":"Ren Z, Wang Y, Liebenson D, Liggett T, Goswami R, Stefoski D, Balabanov R (2011) IRF-1 signaling in central nervous system glial cells regulates inflammatory demyelination. J Neuroimmunol 233:147\u2013159","journal-title":"J Neuroimmunol"},{"key":"3916_CR52","doi-asserted-by":"publisher","first-page":"1169","DOI":"10.1093\/hmg\/7.7.1169","volume":"7","author":"T Roberts","year":"1998","unstructured":"Roberts T, Chernova O, Cowell JK (1998) NB4S, a member of the TBC1 domain family of genes, is truncated as a result of a constitutional t(1;10)(p22;q21) chromosome translocation in a patient with stage 4S neuroblastoma. Hum Mol Genet 7:1169\u20131178","journal-title":"Hum Mol Genet"},{"key":"3916_CR53","doi-asserted-by":"publisher","first-page":"257","DOI":"10.1016\/j.virol.2010.02.020","volume":"401","author":"T Rowe","year":"2010","unstructured":"Rowe T, Leon AJ, Crevar CJ, Carter DM, Xu L, Ran L, Fang Y, Cameron CM, Cameron MJ, Banner D, Ng DC, Ran R, Weirback HK, Wiley CA, Kelvin DJ, Ross TM (2010) Modeling host responses in ferrets during A\/California\/07\/2009 influenza infection. Virology 401:257\u2013265","journal-title":"Virology"},{"key":"3916_CR54","doi-asserted-by":"publisher","first-page":"8","DOI":"10.1186\/1752-0509-4-8","volume":"4","author":"J Ruan","year":"2010","unstructured":"Ruan J, Dean AK, Zhang W (2010) A general co-expression network-based approach to gene expression analysis: comparison and applications. BMC Syst Biol 4:8","journal-title":"BMC Syst Biol"},{"key":"3916_CR55","doi-asserted-by":"publisher","first-page":"1542","DOI":"10.1093\/bioinformatics\/18.11.1542","volume":"18","author":"M Safran","year":"2002","unstructured":"Safran M, Solomon I, Shmueli O, Lapidot M, Shen-Orr S, Adato A, Ben-Dor U, Esterman N, Rosen N, Peter I (2002) GeneCards\u2122 2002: towards a complete, object-oriented, human gene compendium. Bioinformatics 18:1542\u20131543","journal-title":"Bioinformatics"},{"key":"3916_CR56","doi-asserted-by":"publisher","first-page":"355","DOI":"10.1002\/ijc.25704","volume":"129","author":"A Sanchez-Palencia","year":"2011","unstructured":"Sanchez-Palencia A, Gomez-Morales M, Gomez-Capilla JA, Pedraza V, Boyero L, Rosell R, Farez-Vidal ME (2011) Gene expression profiling reveals novel biomarkers in nonsmall cell lung cancer. Int J Cancer 129:355\u2013364","journal-title":"Int J Cancer"},{"key":"3916_CR57","doi-asserted-by":"publisher","first-page":"e131","DOI":"10.1371\/journal.pcbi.0030131","volume":"3","author":"R Shalgi","year":"2007","unstructured":"Shalgi R, Lieber D, Oren M, Pilpel Y (2007) Global and Local Architecture of the Mammalian microRNA\u2014transcription factor regulatory network. PLoS Comput Biol 3:e131","journal-title":"PLoS Comput Biol"},{"key":"3916_CR58","doi-asserted-by":"publisher","first-page":"2498","DOI":"10.1101\/gr.1239303","volume":"13","author":"P Shannon","year":"2003","unstructured":"Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, Amin N, Schwikowski B, Ideker T (2003) Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 13:2498\u20132504","journal-title":"Genome Res"},{"key":"3916_CR59","doi-asserted-by":"publisher","first-page":"249","DOI":"10.1126\/science.1087447","volume":"302","author":"JM Stuart","year":"2003","unstructured":"Stuart JM, Segal E, Koller D, Kim SK (2003) A gene-coexpression network for global discovery of conserved genetic modules. Science 302:249\u2013255","journal-title":"Science"},{"key":"3916_CR60","doi-asserted-by":"publisher","first-page":"225","DOI":"10.1016\/S1386-6532(03)00119-7","volume":"28","author":"M Studahl","year":"2003","unstructured":"Studahl M (2003) Influenza virus and CNS manifestations. J Clin Virol 28:225\u2013232","journal-title":"J Clin Virol"},{"key":"3916_CR61","doi-asserted-by":"publisher","first-page":"15545","DOI":"10.1073\/pnas.0506580102","volume":"102","author":"A Subramanian","year":"2005","unstructured":"Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, Gillette MA, Paulovich A, Pomeroy SL, Golub TR, Lander ES, Mesirov JP (2005) Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci USA 102:15545\u201315550","journal-title":"Proc Natl Acad Sci USA"},{"key":"3916_CR62","doi-asserted-by":"crossref","first-page":"3359","DOI":"10.1242\/dev.126.15.3359","volume":"126","author":"L Sussel","year":"1999","unstructured":"Sussel L, Marin O, Kimura S, Rubenstein JL (1999) Loss of Nkx2.1 homeobox gene function results in a ventral to dorsal molecular respecification within the basal telencephalon: evidence for a transformation of the pallidum into the striatum. Development 126:3359\u20133370","journal-title":"Development"},{"key":"3916_CR63","doi-asserted-by":"publisher","first-page":"142","DOI":"10.1016\/S1474-4422(10)70015-6","volume":"9","author":"K Tan","year":"2010","unstructured":"Tan K, Prerna A, Leo YS (2010) Surveillance of H1N1-related neurological complications. Lancet Neurol 9:142\u2013143","journal-title":"Lancet Neurol"},{"key":"3916_CR64","doi-asserted-by":"publisher","first-page":"13098","DOI":"10.1523\/JNEUROSCI.3986-07.2007","volume":"27","author":"T Terabayashi","year":"2007","unstructured":"Terabayashi T, Itoh TJ, Yamaguchi H, Yoshimura Y, Funato Y, Ohno S, Miki H (2007) Polarity-regulating kinase partitioning-defective 1\/microtubule affinity-regulating kinase 2 negatively regulates development of dendrites on hippocampal neurons. J Neurosci 27:13098\u201313107","journal-title":"J Neurosci"},{"key":"3916_CR65","doi-asserted-by":"publisher","first-page":"114","DOI":"10.1016\/j.tmaid.2008.03.003","volume":"6","author":"S Toovey","year":"2008","unstructured":"Toovey S (2008) Influenza-associated central nervous system dysfunction: a literature review. Travel Med Infect Dis 6:114\u2013124","journal-title":"Travel Med Infect Dis"},{"key":"3916_CR66","doi-asserted-by":"publisher","first-page":"685","DOI":"10.1016\/S1567-133X(03)00094-2","volume":"3","author":"J Urny","year":"2003","unstructured":"Urny J, Hermans-Borgmeyer I, Gercken G, Schaller HC (2003) Expression of the presenilin-like signal peptide peptidase (SPP) in mouse adult brain and during development. Gene Expr Patterns 3:685\u2013691","journal-title":"Gene Expr Patterns"},{"key":"3916_CR67","doi-asserted-by":"publisher","first-page":"8778","DOI":"10.1073\/pnas.1000886107","volume":"107","author":"AJ Valleron","year":"2010","unstructured":"Valleron AJ, Cori A, Valtat S, Meurisse S, Carrat F, Boelle PY (2010) Transmissibility and geographic spread of the 1889 influenza pandemic. Proc Natl Acad Sci USA 107:8778\u20138781","journal-title":"Proc Natl Acad Sci USA"},{"key":"3916_CR68","doi-asserted-by":"publisher","first-page":"1062","DOI":"10.1373\/clinchem.2013.208975","volume":"59","author":"CKS Wong","year":"2013","unstructured":"Wong CKS, Zhu H, Li OTW, Leung YHC, Chan MCW, Guan Y, Peiris JSM, Poon LLM (2013) Molecular detection of human H7N9 influenza A virus causing outbreaks in China. Clin Chem 59:1062\u20131067","journal-title":"Clin Chem"},{"key":"3916_CR69","doi-asserted-by":"publisher","first-page":"189","DOI":"10.1038\/msb.2008.27","volume":"4","author":"X Wu","year":"2008","unstructured":"Wu X, Jiang R, Zhang MQ, Li S (2008) Network-based global inference of human disease genes. Mol Syst Biol 4:189","journal-title":"Mol Syst Biol"},{"key":"3916_CR70","doi-asserted-by":"crossref","first-page":"1128","DOI":"10.2202\/1544-6115.1128","volume":"4","author":"B Zhang","year":"2005","unstructured":"Zhang B, Horvath S (2005) A general framework for weighted gene co-expression network analysis. Stat Appl Genet Mol Biol 4:1128","journal-title":"Stat Appl Genet Mol Biol"},{"key":"3916_CR71","doi-asserted-by":"publisher","first-page":"874","DOI":"10.1038\/nn.2835","volume":"14","author":"H Zhang","year":"2011","unstructured":"Zhang H, Constantine R, Vorobiev S, Chen Y, Seetharaman J, Huang YJ, Xiao R, Montelione GT, Gerstner CD, Davis MW, Inana G, Whitby FG, Jorgensen EM, Hill CP, Tong L, Baehr W (2011) UNC119 is required for G protein trafficking in sensory neurons. Nat Neurosci 14:874\u2013880","journal-title":"Nat Neurosci"}],"container-title":["Molecular Biology Reports"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s11033-015-3916-4.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s11033-015-3916-4\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s11033-015-3916-4","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s11033-015-3916-4.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,4,7]],"date-time":"2025-04-07T21:38:13Z","timestamp":1744061893000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s11033-015-3916-4"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2015,8,6]]},"references-count":71,"journal-issue":{"issue":"9","published-print":{"date-parts":[[2015,9]]}},"alternative-id":["3916"],"URL":"https:\/\/doi.org\/10.1007\/s11033-015-3916-4","relation":{},"ISSN":["0301-4851","1573-4978"],"issn-type":[{"type":"print","value":"0301-4851"},{"type":"electronic","value":"1573-4978"}],"subject":[],"published":{"date-parts":[[2015,8,6]]},"assertion":[{"value":"24 November 2014","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"22 July 2015","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"6 August 2015","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}}]}}