{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,31]],"date-time":"2026-08-31T13:50:38Z","timestamp":1788184238195,"version":"build-2803163510"},"reference-count":70,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2025,5,22]],"date-time":"2025-05-22T00:00:00Z","timestamp":1747872000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2025,5,22]],"date-time":"2025-05-22T00:00:00Z","timestamp":1747872000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"funder":[{"DOI":"10.13039\/501100013782","name":"Suan Sunandha Rajabhat University","doi-asserted-by":"crossref","award":["\u0e07\u0e1b11773\/2566"],"award-info":[{"award-number":["\u0e07\u0e1b11773\/2566"]}],"id":[{"id":"10.13039\/501100013782","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Mol Biol Rep"],"published-print":{"date-parts":[[2025,12]]},"DOI":"10.1007\/s11033-025-10593-1","type":"journal-article","created":{"date-parts":[[2025,5,22]],"date-time":"2025-05-22T04:41:49Z","timestamp":1747888909000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":6,"title":["Comparative genomic analysis of cassava rhizospheric Bacillus subtilis using integrated in vitro and in silico approaches with enterobacterial repetitive intergenic consensus (ERIC) sequences"],"prefix":"10.1007","volume":"52","author":[{"given":"Supajit","family":"Sraphet","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Chaisri","family":"Tharasawatpipat","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sivapan","family":"Choo-in","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Pantip","family":"Kayee","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sirilak","family":"Namwong","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tanakwan","family":"Budsabun","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bagher","family":"Javadi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2025,5,22]]},"reference":[{"key":"10593_CR1","doi-asserted-by":"crossref","unstructured":"Morris WF et al (2020) Biotic and anthropogenic forces rival climatic\/abiotic factors in determining global plant population growth and fitness. Proceedings of the National Academy of Sciences. 117(2): pp. 1107\u20131112","DOI":"10.1073\/pnas.1918363117"},{"key":"10593_CR2","doi-asserted-by":"crossref","unstructured":"Teshome DT, Zharare GE, Naidoo S (2020) The threat of the combined effect of biotic and abiotic stress factors in forestry under a changing climate. 11:1874Frontiers in plant science","DOI":"10.3389\/fpls.2020.601009"},{"key":"10593_CR3","doi-asserted-by":"crossref","unstructured":"Peck S, Mittler R (2020) Plant signaling in biotic and abiotic stress. Oxford University Press UK, pp 1649\u20131651","DOI":"10.1093\/jxb\/eraa051"},{"key":"10593_CR4","doi-asserted-by":"crossref","first-page":"1298","DOI":"10.3389\/fmicb.2020.01298","volume":"11","author":"R Nishad","year":"2020","unstructured":"Nishad R et al (2020) Modulation of plant defense system in response to microbial interactions. Front Microbiol 11:1298","journal-title":"Front Microbiol"},{"issue":"11","key":"10593_CR5","doi-asserted-by":"crossref","first-page":"607","DOI":"10.1038\/s41579-020-0412-1","volume":"18","author":"P Trivedi","year":"2020","unstructured":"Trivedi P et al (2020) Plant\u2013microbiome interactions: from community assembly to plant health. Nat Rev Microbiol 18(11):607\u2013621","journal-title":"Nat Rev Microbiol"},{"issue":"2","key":"10593_CR6","doi-asserted-by":"crossref","first-page":"e1009242","DOI":"10.1371\/journal.ppat.1009242","volume":"17","author":"S Zhao","year":"2021","unstructured":"Zhao S, Li Y (2021) Current Understanding of the interplays between host hormones and plant viral infections. PLoS Pathog 17(2):e1009242","journal-title":"PLoS Pathog"},{"issue":"2","key":"10593_CR7","doi-asserted-by":"crossref","first-page":"132","DOI":"10.1017\/wsc.2021.1","volume":"69","author":"NG Little","year":"2021","unstructured":"Little NG et al (2021) Effects of fertility amendments on weed growth and weed\u2013crop competition: a review. Weed Sci 69(2):132\u2013146","journal-title":"Weed Sci"},{"issue":"6","key":"10593_CR8","doi-asserted-by":"crossref","first-page":"1212","DOI":"10.3390\/plants10061212","volume":"10","author":"M Hasan","year":"2021","unstructured":"Hasan M et al (2021) Bioherbicides: an eco-friendly tool for sustainable weed management. Plants 10(6):1212","journal-title":"Plants"},{"issue":"5","key":"10593_CR9","doi-asserted-by":"crossref","first-page":"462","DOI":"10.1094\/MPMI-11-20-0318-FI","volume":"34","author":"D Thoms","year":"2021","unstructured":"Thoms D, Liang Y, Haney CH (2021) Maintaining symbiotic homeostasis: how do plants engage with beneficial microorganisms while at the same time restricting pathogens? Mol Plant Microbe Interact 34(5):462\u2013469","journal-title":"Mol Plant Microbe Interact"},{"issue":"6","key":"10593_CR10","doi-asserted-by":"crossref","first-page":"475","DOI":"10.3390\/biology10060475","volume":"10","author":"G Santoyo","year":"2021","unstructured":"Santoyo G et al (2021) Rhizosphere colonization determinants by plant growth-promoting rhizobacteria (PGPR). Biology 10(6):475","journal-title":"Biology"},{"issue":"3","key":"10593_CR11","doi-asserted-by":"crossref","first-page":"206","DOI":"10.3390\/d14030206","volume":"14","author":"S Sraphet","year":"2022","unstructured":"Sraphet S, Javadi B (2022) Unraveling techniques for plant Microbiome structure analysis. Diversity 14(3):206","journal-title":"Diversity"},{"key":"10593_CR12","doi-asserted-by":"crossref","unstructured":"Parewa HP et al (2021) Role of biofertilizers and biopesticides in organic farming. Advances in Organic Farming: pp. 133\u2013159","DOI":"10.1016\/B978-0-12-822358-1.00009-2"},{"key":"10593_CR13","doi-asserted-by":"crossref","unstructured":"Pathma J et al (2021) Microbial biofertilizers and biopesticides: nature\u2019s assets fostering sustainable agriculture. Recent developments in microbial technologies: pp. 39\u201369","DOI":"10.1007\/978-981-15-4439-2_2"},{"key":"10593_CR14","doi-asserted-by":"crossref","unstructured":"Riaz U et al (2021) Plant Growth-Promoting Rhizobacteria (PGPR) as biofertilizers and biopesticides. Microbiota and biofertilizers: a sustainable continuum for plant and soil health: pp. 181\u2013196","DOI":"10.1007\/978-3-030-48771-3_11"},{"issue":"1","key":"10593_CR15","first-page":"496562","volume":"2014","author":"MB Javadi Nobandegani","year":"2014","unstructured":"Javadi Nobandegani MB, Saud HM, Yun WM (2014) Specific genomic fingerprints of phosphate solubilizing Pseudomonas strains generated by BOX elements. Biomed Res Int 2014(1):496562","journal-title":"Biomed Res Int"},{"issue":"1","key":"10593_CR16","doi-asserted-by":"crossref","first-page":"102","DOI":"10.1186\/s12866-025-03811-0","volume":"25","author":"R Thakur","year":"2025","unstructured":"Thakur R et al (2025) Tea seedlings growth promotion by widely distributed and stress-tolerant PGPR from the acidic soils of the Kangra Valley. BMC Microbiol 25(1):102","journal-title":"BMC Microbiol"},{"issue":"5","key":"10593_CR17","doi-asserted-by":"crossref","first-page":"3543","DOI":"10.1111\/jam.15480","volume":"132","author":"S Mahapatra","year":"2022","unstructured":"Mahapatra S, Yadav R, Ramakrishna W (2022) Bacillus subtilis impact on plant growth, soil health and environment: dr. Jekyll and Mr. Hyde. J Appl Microbiol 132(5):3543\u20133562","journal-title":"J Appl Microbiol"},{"issue":"1","key":"10593_CR18","doi-asserted-by":"crossref","first-page":"15","DOI":"10.1094\/MPMI-08-20-0225-CR","volume":"34","author":"C Blake","year":"2021","unstructured":"Blake C, Christensen MN, Kov\u00e1cs \u00c1T (2021) Molecular aspects of plant growth promotion and protection by Bacillus subtilis. Mol Plant Microbe Interact 34(1):15\u201325","journal-title":"Mol Plant Microbe Interact"},{"issue":"1","key":"10593_CR19","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/s12934-019-1269-8","volume":"19","author":"Y Su","year":"2020","unstructured":"Su Y et al (2020) Bacillus subtilis: a universal cell factory for industry, agriculture, biomaterials and medicine. Microb Cell Fact 19(1):1\u201312","journal-title":"Microb Cell Fact"},{"issue":"1","key":"10593_CR20","first-page":"201379","volume":"2015","author":"MB Javadi Nobandegani","year":"2015","unstructured":"Javadi Nobandegani MB, Saud HM, Yun WM (2015) Phylogenetic relationship of phosphate solubilizing bacteria according to 16S rRNA genes. Biomed Res Int 2015(1):201379","journal-title":"Biomed Res Int"},{"key":"10593_CR21","doi-asserted-by":"crossref","first-page":"109729","DOI":"10.1016\/j.cellsig.2020.109729","volume":"74","author":"G Christie","year":"2020","unstructured":"Christie G, Setlow P (2020) Bacillus spore germination: knowns, unknowns and what we need to learn. Cell Signal 74:109729","journal-title":"Cell Signal"},{"issue":"4","key":"10593_CR22","doi-asserted-by":"crossref","first-page":"513","DOI":"10.1080\/1040841X.2021.1983517","volume":"48","author":"SD Todorov","year":"2022","unstructured":"Todorov SD et al (2022) Bacillus spore-forming probiotics: benefits with concerns? Crit Rev Microbiol 48(4):513\u2013530","journal-title":"Crit Rev Microbiol"},{"key":"10593_CR23","doi-asserted-by":"crossref","unstructured":"Vieira MEO et al (2023) Unlocking Plant Defenses: Harnessing the Power of Beneficial Microorganisms for Induced Systemic Resistance in Vegetables\u2013A Systematic Review. Biological Control: p. 105428","DOI":"10.1016\/j.biocontrol.2023.105428"},{"issue":"3","key":"10593_CR24","doi-asserted-by":"crossref","first-page":"386","DOI":"10.3390\/plants11030386","volume":"11","author":"Y Yu","year":"2022","unstructured":"Yu Y et al (2022) Induced systemic resistance for improving plant immunity by beneficial microbes. Plants 11(3):386","journal-title":"Plants"},{"issue":"6","key":"10593_CR25","doi-asserted-by":"crossref","first-page":"1583","DOI":"10.1111\/jam.14506","volume":"128","author":"AK Saxena","year":"2020","unstructured":"Saxena AK et al (2020) Bacillus species in soil as a natural resource for plant health and nutrition. J Appl Microbiol 128(6):1583\u20131594","journal-title":"J Appl Microbiol"},{"key":"10593_CR26","doi-asserted-by":"crossref","first-page":"1350","DOI":"10.3389\/fmicb.2020.01350","volume":"11","author":"S Andri\u0107","year":"2020","unstructured":"Andri\u0107 S, Meyer T, Ongena M (2020) Bacillus responses to plant-associated fungal and bacterial communities. Front Microbiol 11:1350","journal-title":"Front Microbiol"},{"key":"10593_CR27","doi-asserted-by":"crossref","first-page":"359","DOI":"10.1016\/j.plaphy.2020.01.032","volume":"148","author":"O-G Woo","year":"2020","unstructured":"Woo O-G et al (2020) Bacillus subtilis strain GOT9 confers enhanced tolerance to drought and salt stresses in Arabidopsis thaliana and Brassica campestris. Plant Physiol Biochem 148:359\u2013367","journal-title":"Plant Physiol Biochem"},{"issue":"12","key":"10593_CR28","doi-asserted-by":"crossref","first-page":"1273","DOI":"10.3390\/agriculture11121273","volume":"11","author":"S Iqbal","year":"2021","unstructured":"Iqbal S, Ullah N, Janjua HA (2021) Vitro evaluation and genome mining of Bacillus subtilis strain RS10 reveals its biocontrol and plant Growth-Promoting potential. Agriculture 11(12):1273","journal-title":"Agriculture"},{"issue":"3","key":"10593_CR29","doi-asserted-by":"crossref","first-page":"167","DOI":"10.1016\/S0923-2508(00)00136-4","volume":"151","author":"L Ranjard","year":"2000","unstructured":"Ranjard L, Poly F, Nazaret S (2000) Monitoring complex bacterial communities using culture-independent molecular techniques: application to soil environment. Res Microbiol 151(3):167\u2013177","journal-title":"Res Microbiol"},{"issue":"6","key":"10593_CR30","doi-asserted-by":"crossref","first-page":"1661","DOI":"10.1128\/JCM.37.6.1661-1669.1999","volume":"37","author":"DM Olive","year":"1999","unstructured":"Olive DM, Bean P (1999) Principles and applications of methods for DNA-based typing of microbial organisms. J Clin Microbiol 37(6):1661\u20131669","journal-title":"J Clin Microbiol"},{"issue":"24","key":"10593_CR31","doi-asserted-by":"crossref","first-page":"6823","DOI":"10.1093\/nar\/19.24.6823","volume":"19","author":"J Versalovic","year":"1991","unstructured":"Versalovic J, Koeuth T, Lupski R (1991) Distribution of repetitive DNA sequences in eubacteria and application to finerpriting of bacterial Enomes. Nucleic Acids Res 19(24):6823\u20136831","journal-title":"Nucleic Acids Res"},{"key":"10593_CR32","unstructured":"Rademaker JL (1997) Characterization and classification of microbes by rep-PCR genomic fingerprinting and computer-assisted pattern analysis. DNA markers: protocols, applications, and overviews"},{"issue":"9","key":"10593_CR33","doi-asserted-by":"crossref","first-page":"733","DOI":"10.1038\/nrmicro1236","volume":"3","author":"D Gevers","year":"2005","unstructured":"Gevers D et al (2005) Re-evaluating prokaryotic species. Nat Rev Microbiol 3(9):733\u2013739","journal-title":"Nat Rev Microbiol"},{"issue":"10","key":"10593_CR34","doi-asserted-by":"crossref","first-page":"4479","DOI":"10.1128\/AEM.67.10.4479-4487.2001","volume":"67","author":"L Ranjard","year":"2001","unstructured":"Ranjard L et al (2001) Characterization of bacterial and fungal soil communities by automated ribosomal intergenic spacer analysis fingerprints: biological and methodological variability. Appl Environ Microbiol 67(10):4479\u20134487","journal-title":"Appl Environ Microbiol"},{"key":"10593_CR35","doi-asserted-by":"crossref","unstructured":"Sadowsky MJ, Whitman RL (2010) The fecal bacteria. American Society for Microbiology","DOI":"10.1128\/9781555816865"},{"issue":"2","key":"10593_CR36","doi-asserted-by":"crossref","first-page":"697","DOI":"10.1128\/jb.173.2.697-703.1991","volume":"173","author":"WG Weisburg","year":"1991","unstructured":"Weisburg WG et al (1991) 16S ribosomal DNA amplification for phylogenetic study. J Bacteriol 173(2):697\u2013703","journal-title":"J Bacteriol"},{"key":"10593_CR37","doi-asserted-by":"crossref","unstructured":"Versalovic J, de Bruijn FJ, Lupski JR (1998) Repetitive sequence-based PCR (rep-PCR) DNA fingerprinting of bacterial genomes, in Bacterial genomes: physical structure and analysisSpringer. pp. 437\u2013454","DOI":"10.1007\/978-1-4615-6369-3_34"},{"key":"10593_CR38","unstructured":"Garcia-Vallv\u00e9 S, Puigbo P (2009) DendroUPGMA: a dendrogram construction utility. Universitat Rovira i Virgili: pp. 1\u201314"},{"issue":"9","key":"10593_CR39","doi-asserted-by":"crossref","first-page":"699","DOI":"10.1038\/nrg1674","volume":"6","author":"TR Gregory","year":"2005","unstructured":"Gregory TR (2005) Synergy between sequence and size in large-scale genomics. Nat Rev Genet 6(9):699\u2013708","journal-title":"Nat Rev Genet"},{"key":"10593_CR40","doi-asserted-by":"crossref","unstructured":"Aras RA et al (2003) Extensive repetitive DNA facilitates prokaryotic genome plasticity. Proceedings of the National Academy of Sciences. 100(23): pp. 13579\u201313584","DOI":"10.1073\/pnas.1735481100"},{"issue":"4","key":"10593_CR41","doi-asserted-by":"crossref","first-page":"1279","DOI":"10.1093\/genetics\/164.4.1279","volume":"164","author":"G Achaz","year":"2003","unstructured":"Achaz G et al (2003) Associations between inverted repeats and the structural evolution of bacterial genomes. Genetics 164(4):1279\u20131289","journal-title":"Genetics"},{"issue":"7","key":"10593_CR42","doi-asserted-by":"crossref","first-page":"460","DOI":"10.1038\/s41576-024-00692-3","volume":"25","author":"HA Tanudisastro","year":"2024","unstructured":"Tanudisastro HA et al (2024) Sequencing and characterizing short tandem repeats in the human genome. Nat Rev Genet 25(7):460\u2013475","journal-title":"Nat Rev Genet"},{"issue":"1","key":"10593_CR43","doi-asserted-by":"crossref","first-page":"14","DOI":"10.1186\/s41935-024-00387-0","volume":"14","author":"IS Omar","year":"2024","unstructured":"Omar IS et al (2024) Forensic short tandem repeat markers alteration in cancerous tissues: a scoping review. Egypt J Forensic Sci 14(1):14","journal-title":"Egypt J Forensic Sci"},{"issue":"3","key":"10593_CR44","doi-asserted-by":"crossref","first-page":"328","DOI":"10.3390\/genes15030328","volume":"15","author":"MF Minnick","year":"2024","unstructured":"Minnick MF (2024) Functional roles and genomic impact of miniature inverted-repeat transposable elements (MITEs) in prokaryotes. Genes 15(3):328","journal-title":"Genes"},{"issue":"3","key":"10593_CR45","doi-asserted-by":"crossref","first-page":"249","DOI":"10.1042\/ETLS20230022","volume":"7","author":"MA Panoyan","year":"2023","unstructured":"Panoyan MA, Wendt FR (2023) The role of tandem repeat expansions in brain disorders. Emerg Top Life Sci 7(3):249\u2013263","journal-title":"Emerg Top Life Sci"},{"key":"10593_CR46","doi-asserted-by":"crossref","first-page":"100473","DOI":"10.1016\/j.coisb.2023.100473","volume":"36","author":"EV Koonin","year":"2023","unstructured":"Koonin EV, Krupovic M (2023) New faces of prokaryotic mobile genetic elements: guide RNAs link transposition with host defense mechanisms. Curr Opin Syst Biology 36:100473","journal-title":"Curr Opin Syst Biology"},{"issue":"12","key":"10593_CR47","doi-asserted-by":"crossref","first-page":"fiad154","DOI":"10.1093\/femsec\/fiad154","volume":"99","author":"M Vos","year":"2023","unstructured":"Vos M et al (2023) Adaptive radiations in natural populations of prokaryotes: innovation is key. FEMS Microbiol Ecol 99(12):fiad154","journal-title":"FEMS Microbiol Ecol"},{"issue":"6","key":"10593_CR48","doi-asserted-by":"crossref","first-page":"1156","DOI":"10.1093\/molbev\/msj125","volume":"23","author":"LA Wilson","year":"2006","unstructured":"Wilson LA, Sharp PM (2006) Enterobacterial repetitive intergenic consensus (ERIC) sequences in Escherichia coli: evolution and implications for ERIC-PCR. Mol Biol Evol 23(6):1156\u20131168","journal-title":"Mol Biol Evol"},{"issue":"3","key":"10593_CR49","doi-asserted-by":"crossref","first-page":"175","DOI":"10.1016\/0925-6164(92)90013-U","volume":"1","author":"J Versalovic","year":"1992","unstructured":"Versalovic J et al (1992) Quality control for bacterial Inhibition assays: DNA fingerprinting of microorganisms by rep-PCR. Screening 1(3):175\u2013183","journal-title":"Screening"},{"issue":"6","key":"10593_CR50","doi-asserted-by":"crossref","first-page":"1108","DOI":"10.1046\/j.1365-2672.2003.01945.x","volume":"94","author":"A Cherif","year":"2003","unstructured":"Cherif A et al (2003) Genetic relationship in the \u2018bacillus cereus group\u2019by rep-PCR fingerprinting and sequencing of a Bacillus anthracis\u2010specific rep\u2010PCR fragment. J Appl Microbiol 94(6):1108\u20131119","journal-title":"J Appl Microbiol"},{"issue":"11","key":"10593_CR51","doi-asserted-by":"crossref","first-page":"4331","DOI":"10.1128\/aem.63.11.4331-4339.1997","volume":"63","author":"T Hurek","year":"1997","unstructured":"Hurek T, Wagner B, Reinhold-Hurek B (1997) Identification of N2-fixing plant-and fungus-associated Azoarcus species by PCR-based genomic fingerprints. Appl Environ Microbiol 63(11):4331\u20134339","journal-title":"Appl Environ Microbiol"},{"key":"10593_CR52","doi-asserted-by":"crossref","first-page":"159","DOI":"10.1007\/s10658-011-9929-5","volume":"133","author":"M Lema","year":"2012","unstructured":"Lema M et al (2012) Discrimination of Xanthomonas campestris Pv. campestris races among strains from Northwestern Spain by Brassica spp. Genotypes and rep-PCR. Eur J Plant Pathol 133:159\u2013169","journal-title":"Eur J Plant Pathol"},{"key":"10593_CR53","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/s12917-017-0977-8","volume":"13","author":"I Serrano","year":"2016","unstructured":"Serrano I et al (2016) Antimicrobial resistance and genomic rep-PCR fingerprints of Pseudomonas aeruginosa strains from animals on the background of the global population structure. BMC Vet Res 13:1\u20138","journal-title":"BMC Vet Res"},{"key":"10593_CR54","doi-asserted-by":"crossref","first-page":"2101","DOI":"10.1902\/jop.2005.76.11-S.2101","volume":"76","author":"MC Herzberg","year":"2005","unstructured":"Herzberg MC et al (2005) Oral Streptococci and cardiovascular disease: searching for the platelet aggregation-associated protein gene and mechanisms of Streptococcus sanguis\u2010induced thrombosis. J Periodontol 76:2101\u20132105","journal-title":"J Periodontol"},{"key":"10593_CR55","doi-asserted-by":"crossref","first-page":"2125","DOI":"10.1007\/s11274-012-1018-1","volume":"28","author":"L-H Lee","year":"2012","unstructured":"Lee L-H et al (2012) Molecular characterization of Antarctic actinobacteria and screening for antimicrobial metabolite production. World J Microbiol Biotechnol 28:2125\u20132137","journal-title":"World J Microbiol Biotechnol"},{"key":"10593_CR56","doi-asserted-by":"crossref","unstructured":"Yungyuen T et al (2023) Study of Streptococcus pneumoniae serotype 19A blood isolates from Thailand by enterobacterial repetitive intergenic consensus (ERIC)-PCR typing. Sci Asia 49(4)","DOI":"10.2306\/scienceasia1513-1874.2023.038"},{"issue":"1","key":"10593_CR57","doi-asserted-by":"crossref","first-page":"82","DOI":"10.1016\/j.ijfoodmicro.2006.12.025","volume":"116","author":"D Jurkovi\u010d","year":"2007","unstructured":"Jurkovi\u010d D et al (2007) Genetic diversity of Enterococcus faecium isolated from Bryndza cheese. Int J Food Microbiol 116(1):82\u201387","journal-title":"Int J Food Microbiol"},{"issue":"4","key":"10593_CR58","first-page":"245","volume":"25","author":"ED Candan","year":"2013","unstructured":"Candan ED, Idil N, Bilkay IS (2013) Usefulness of REP and ERIC-PCR combination for tracking the spread of Staphylococcus aureus strains. Minerva Biotecnologica 25(4):245\u2013250","journal-title":"Minerva Biotecnologica"},{"issue":"2","key":"10593_CR59","first-page":"119","volume":"48","author":"NS Shaligram","year":"2010","unstructured":"Shaligram NS, Singhal RS (2010) Surfactin\u2013a review on biosynthesis, fermentation, purification and applications. Food Technol Biotechnol 48(2):119\u2013134","journal-title":"Food Technol Biotechnol"},{"issue":"15","key":"10593_CR60","doi-asserted-by":"crossref","first-page":"11446","DOI":"10.1074\/jbc.M610267200","volume":"282","author":"DL Siehl","year":"2007","unstructured":"Siehl DL et al (2007) The molecular basis of glyphosate resistance by an optimized microbial acetyltransferase. J Biol Chem 282(15):11446\u201311455","journal-title":"J Biol Chem"},{"key":"10593_CR61","doi-asserted-by":"crossref","first-page":"e00225","DOI":"10.1016\/j.mec.2023.e00225","volume":"17","author":"P Hanke","year":"2023","unstructured":"Hanke P et al (2023) Engineering of increased L-Threonine production in bacteria by combinatorial cloning and machine learning. Metabolic Eng Commun 17:e00225","journal-title":"Metabolic Eng Commun"},{"key":"10593_CR62","doi-asserted-by":"crossref","unstructured":"Tiburski JH et al (2014) Water distribution in bacterial spores: a key factor in heat resistance. Food biophysics. 9: pp. 10\u201319","DOI":"10.1007\/s11483-013-9312-5"},{"issue":"1","key":"10593_CR63","doi-asserted-by":"crossref","first-page":"401","DOI":"10.1146\/annurev.micro.61.080706.093316","volume":"61","author":"T Danhorn","year":"2007","unstructured":"Danhorn T, Fuqua C (2007) Biofilm formation by plant-associated bacteria. Annu Rev Microbiol 61(1):401\u2013422","journal-title":"Annu Rev Microbiol"},{"issue":"8\u20139","key":"10593_CR64","doi-asserted-by":"crossref","first-page":"1086","DOI":"10.1016\/j.bbabio.2012.11.007","volume":"1827","author":"C Iobbi-Nivol","year":"2013","unstructured":"Iobbi-Nivol C, Leimk\u00fchler S (2013) Molybdenum enzymes, their maturation and molybdenum cofactor biosynthesis in Escherichia coli. Biochim Et Biophys Acta (BBA)-Bioenergetics 1827(8\u20139):1086\u20131101","journal-title":"Biochim Et Biophys Acta (BBA)-Bioenergetics"},{"issue":"6","key":"10593_CR65","doi-asserted-by":"crossref","first-page":"550","DOI":"10.1016\/j.mib.2003.10.001","volume":"6","author":"P Setlow","year":"2003","unstructured":"Setlow P (2003) Spore germination. Curr Opin Microbiol 6(6):550\u2013556","journal-title":"Curr Opin Microbiol"},{"key":"10593_CR66","doi-asserted-by":"crossref","unstructured":"Prajapati RS, Cutting SM (2002) Spores, Sporulation and Germination, in Molecular Medical MicrobiologyElsevier. pp. 199\u2013208","DOI":"10.1016\/B978-012677530-3\/50229-4"},{"key":"10593_CR67","doi-asserted-by":"publisher","unstructured":"Winkler ME, Ramos-Monta\u00f1ez S (2009) Biosynthesis of histidine. EcoSal Plus 3(2). https:\/\/doi.org\/10.1128\/ecosalplus.3.6.1.9","DOI":"10.1128\/ecosalplus.3.6.1.9"},{"issue":"6","key":"10593_CR68","doi-asserted-by":"crossref","first-page":"755","DOI":"10.1016\/j.sbi.2007.08.004","volume":"17","author":"J Marles-Wright","year":"2007","unstructured":"Marles-Wright J, Lewis RJ (2007) Stress responses of bacteria. Curr Opin Struct Biol 17(6):755\u2013760","journal-title":"Curr Opin Struct Biol"},{"issue":"5","key":"10593_CR69","doi-asserted-by":"crossref","first-page":"821","DOI":"10.1021\/bi401618y","volume":"53","author":"S Manzetti","year":"2014","unstructured":"Manzetti S, Zhang J, van der Spoel D (2014) Thiamin function, metabolism, uptake, and transport. Biochemistry 53(5):821\u2013835","journal-title":"Biochemistry"},{"issue":"2","key":"10593_CR70","doi-asserted-by":"crossref","first-page":"212","DOI":"10.2478\/s11658-007-0048-4","volume":"13","author":"B W\u0142adyka","year":"2008","unstructured":"W\u0142adyka B, Pustelny K (2008) Regulation of bacterial protease activity. Cell Mol Biol Lett 13(2):212\u2013229","journal-title":"Cell Mol Biol Lett"}],"container-title":["Molecular Biology Reports"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s11033-025-10593-1.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s11033-025-10593-1","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s11033-025-10593-1.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,12,27]],"date-time":"2025-12-27T16:30:25Z","timestamp":1766853025000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s11033-025-10593-1"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,5,22]]},"references-count":70,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2025,12]]}},"alternative-id":["10593"],"URL":"https:\/\/doi.org\/10.1007\/s11033-025-10593-1","relation":{},"ISSN":["0301-4851","1573-4978"],"issn-type":[{"value":"0301-4851","type":"print"},{"value":"1573-4978","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,5,22]]},"assertion":[{"value":"4 March 2025","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"9 May 2025","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"22 May 2025","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"The authors declare no competing interests.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}}],"article-number":"489"}}