{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,17]],"date-time":"2026-07-17T23:54:19Z","timestamp":1784332459070,"version":"3.55.0"},"reference-count":22,"publisher":"Springer Science and Business Media LLC","issue":"1-2","license":[{"start":{"date-parts":[[2022,12,30]],"date-time":"2022-12-30T00:00:00Z","timestamp":1672358400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0"},{"start":{"date-parts":[[2022,12,30]],"date-time":"2022-12-30T00:00:00Z","timestamp":1672358400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0"}],"funder":[{"DOI":"10.13039\/501100006345","name":"Uniwersytet Mikolaja Kopernika w Toruniu","doi-asserted-by":"publisher","award":["NCU PDB WF 839"],"award-info":[{"award-number":["NCU PDB WF 839"]}],"id":[{"id":"10.13039\/501100006345","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Mycopathologia"],"published-print":{"date-parts":[[2023,4]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:sec>\n                <jats:title>Background<\/jats:title>\n                <jats:p><jats:italic>Candida auris<\/jats:italic> is an emerging pathogen that constitutes a serious global health threat. It is difficult to identify without specific approaches, and it can be misidentified with standard laboratory methods, what may lead to inappropriate management.<\/jats:p>\n              <\/jats:sec><jats:sec>\n                <jats:title>Case Presentation<\/jats:title>\n                <jats:p>We report, probably the first in Poland, <jats:italic>C. auris<\/jats:italic> isolation from blood cultures and wound swabs of a young male following meningococcal septicaemia, in February 2019. The patient had been previously hospitalized in the United Arab Emirates. The isolate was rapidly identified by matrix-assisted laser desorption ionization-time of flight mass spectrometry and therefore clinicians were promptly informed on the alert pathogen isolation. The targeted antifungal treatment was successful and infection control measures seemed effective. ITS-based identification and subsequent whole genome sequencing showed that the <jats:italic>C. auris<\/jats:italic> isolate belongs to South Asian lineage (clade I).<\/jats:p>\n              <\/jats:sec><jats:sec>\n                <jats:title>Conclusions<\/jats:title>\n                <jats:p><jats:italic>C. auris<\/jats:italic> is able to cause outbreaks in healthcare settings. Therefore, it is important to quickly identify <jats:italic>C. auris<\/jats:italic> isolates in hospital settings so that healthcare facilities can take proper precautions to limit its spread.<\/jats:p>\n              <\/jats:sec>","DOI":"10.1007\/s11046-022-00697-8","type":"journal-article","created":{"date-parts":[[2022,12,30]],"date-time":"2022-12-30T03:02:43Z","timestamp":1672369363000},"page":"135-141","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":2,"title":["Candida auris Infection in a Meningococcal Septicemia Survivor, Poland"],"prefix":"10.1007","volume":"188","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-2977-1808","authenticated-orcid":false,"given":"Ma\u0142gorzata","family":"Pra\u017cy\u0144ska","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Patrycja","family":"Zalas-Wi\u0119cek","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tomasz","family":"Bogiel","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zbigniew","family":"W\u0142odarczyk","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Aleksander","family":"Deptu\u0142a","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marcin","family":"Wo\u017aniak","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Eugenia","family":"Gospodarek-Komkowska","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2022,12,30]]},"reference":[{"key":"697_CR1","unstructured":"Candida auris. Fungal Diseases. CDC. Page last reviewed: 22 Jul 2021. https:\/\/www.cdc.gov\/fungal\/candida-auris\/index.html. Accessed 21 Jun 2022."},{"key":"697_CR2","unstructured":"Candida auris in healthcare settings - Europe. ECDC. 2018;1\u201310. https:\/\/www.ecdc.europa.eu\/sites\/default\/files\/documents\/RRA-Candida-auris-European-Union-countries.pdf. Accessed 21 Jun 2022."},{"key":"697_CR3","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1008921","volume":"16","author":"H Du","year":"2020","unstructured":"Du H, Bing J, Hu T, Ennis CL, Nobile CJ, Huang G. Candida auris: epidemiology, biology, antifungal resistance, and virulence. PLoS Pathog. 2020;16: e1008921. https:\/\/doi.org\/10.1371\/journal.ppat.1008921.","journal-title":"PLoS Pathog"},{"key":"697_CR4","doi-asserted-by":"publisher","unstructured":"Plachouras D, L\u00f6tsch F, Kohlenberg A, Monnet DL, the C auris survey collaborative group. Candida auris: epidemiological situation, laboratory capacity and preparedness in the European Union and European Economic Area*, January 2018 to May 2019. Euro Surveill. 2020;25(12): 2000240. https:\/\/doi.org\/10.2807\/1560-7917.ES.2020.25.12.2000240.","DOI":"10.2807\/1560-7917.ES.2020.25.12.2000240"},{"key":"697_CR5","doi-asserted-by":"publisher","first-page":"35","DOI":"10.1186\/s13756-016-0132-5","volume":"5","author":"S Schelenz","year":"2016","unstructured":"Schelenz S, Hagen F, Rhodes JL, Abdolrasouli A, Chowdhary A, Hall A, et al. First hospital outbreak of the globally emerging Candida auris in a European hospital. Antimicrob Resist Infect Control. 2016;5:35. https:\/\/doi.org\/10.1186\/s13756-016-0132-5.","journal-title":"Antimicrob Resist Infect Control"},{"key":"697_CR6","doi-asserted-by":"publisher","unstructured":"Carolus H, Jacobs S, Lobo Romero C, Deparis Q, Cuomo CA, Meis JF, et al. Diagnostic allele-specific PCR for the identification of Candida auris clades. J Fungi (Basel). 2021;7:754. https:\/\/doi.org\/10.3390\/jof7090754.","DOI":"10.3390\/jof7090754"},{"key":"697_CR7","unstructured":"Babraham Bioinformatics: FastQC. A quality control tool for high throughput sequence data. https:\/\/www.bioinformatics.babraham.ac.uk\/projects\/fastqc\/. Accessed 18 Jul 2022."},{"key":"697_CR8","doi-asserted-by":"publisher","first-page":"i884","DOI":"10.1093\/bioinformatics\/bty560","volume":"17","author":"S Chen","year":"2018","unstructured":"Chen S, Zhou Y, Chen Y, Gu J. fastp: an ultra-fast all-in-one FASTQ preprocessor. Bioinformatics. 2018;17:i884\u201390. https:\/\/doi.org\/10.1093\/bioinformatics\/bty560.","journal-title":"Bioinformatics"},{"key":"697_CR9","doi-asserted-by":"publisher","unstructured":"Prjibelski A, Antipov D, Meleshko D, Lapidus A, Korobeynikov A. Using SPAdes de novo assembler. Curr Protoc Bioinformatics. 2020;1:e102. https:\/\/doi.org\/10.1002\/cpbi.102. 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Simultaneous emergence of multidrug-resistant Candida auris on 3 continents confirmed by whole-genome sequencing and epidemiological analyses. Clin Infect Dis. 2017;64:134\u201340. https:\/\/doi.org\/10.1093\/cid\/ciw691.","journal-title":"Clin Infect Dis"},{"key":"697_CR13","doi-asserted-by":"publisher","unstructured":"Satoh K, Makimura K, Hasumi Y, Nishiyama Y, Uchida K, Yamaguchi H. Candida auris sp. nov., a novel ascomycetous yeast isolated from the external ear canal of an inpatient in a Japanese hospital. Microbiol Immunol. 2009;53:41\u20134. https:\/\/doi.org\/10.1111\/j.1348-0421.2008.00083.x.","DOI":"10.1111\/j.1348-0421.2008.00083.x"},{"key":"697_CR14","doi-asserted-by":"publisher","first-page":"1780","DOI":"10.3201\/eid2509.190686","volume":"25","author":"NA Chow","year":"2019","unstructured":"Chow NA, de Groot T, Badali H, Abastabar M, Chiller TM, Meis JF. Potential fifth clade of Candida auris, Iran, 2018. Emerg Infect Dis. 2019;25:1780\u20131. https:\/\/doi.org\/10.3201\/eid2509.190686.","journal-title":"Emerg Infect Dis"},{"key":"697_CR15","doi-asserted-by":"publisher","unstructured":"Safari F, Madani M, Badali H, Kargoshaie A-A, Fakhim H, Kheirollahi M, et al. A chronic autochthonous fifth clade case of Candida auris otomycosis in Iran. Mycopathologia. 2022;187:121\u20137. https:\/\/doi.org\/10.1007\/s11046-021-00605-6.","DOI":"10.1007\/s11046-021-00605-6"},{"key":"697_CR16","doi-asserted-by":"publisher","unstructured":"Tsay S, Welsh RM, Adams EH, Chow NA, Gade L, Berkow EL, et al. Notes from the field: ongoing transmission of Candida auris in health care facilities\u2014United States, June 2016-May 2017. MMWR Morb Mortal Wkly Rep. 2017;66:514\u20135. https:\/\/doi.org\/10.15585\/mmwr.mm6619a7.","DOI":"10.15585\/mmwr.mm6619a7"},{"key":"697_CR17","doi-asserted-by":"publisher","first-page":"221","DOI":"10.1080\/17843286.2018.1555114","volume":"75","author":"K Dewaele","year":"2020","unstructured":"Dewaele K, Frans J, Smismans A, Ho E, Tollens T, Lagrou K. First case of Candida auris infection in Belgium in a surgical patient from Kuwait. Acta Clin Belg. 2020;75:221\u20138. https:\/\/doi.org\/10.1080\/17843286.2018.1555114.","journal-title":"Acta Clin Belg"},{"key":"697_CR18","doi-asserted-by":"publisher","DOI":"10.4414\/smw.2018.14622","volume":"148","author":"A Riat","year":"2018","unstructured":"Riat A, Neofytos D, Coste AT, Harbarth S, Bizzini A, Grandbastien B, et al. First case of Candida auris in Switzerland: discussion about preventive strategies. Swiss Med Wkly. 2018;148: w14622. https:\/\/doi.org\/10.4414\/smw.2018.14622.","journal-title":"Swiss Med Wkly"},{"key":"697_CR19","doi-asserted-by":"publisher","first-page":"1900549","DOI":"10.2807\/1560-7917.ES.2019.24.37.1900549","volume":"24","author":"F Crea","year":"2019","unstructured":"Crea F, Codda G, Orsi A, Battaglini A, Giacobbe DR, Delfino E, et al. Isolation of Candida auris from invasive and non-invasive samples of a patient suffering from vascular disease, Italy, July 2019. Euro Surveill. 2019;24:1900549. https:\/\/doi.org\/10.2807\/1560-7917.ES.2019.24.37.1900549.","journal-title":"Euro Surveill"},{"key":"697_CR20","doi-asserted-by":"publisher","first-page":"1900400","DOI":"10.2807\/1560-7917.ES.2019.24.29.1900400","volume":"24","author":"A Stathi","year":"2019","unstructured":"Stathi A, Loukou I, Kirikou H, Petrocheilou A, Moustaki M, Velegraki A, et al. Isolation of Candida auris from cystic fibrosis patient, Greece, April 2019. Euro Surveill. 2019;24:1900400. https:\/\/doi.org\/10.2807\/1560-7917.ES.2019.24.29.1900400.","journal-title":"Euro Surveill"},{"key":"697_CR21","doi-asserted-by":"publisher","first-page":"36","DOI":"10.1016\/j.ijid.2018.02.005","volume":"70","author":"A Alatoom","year":"2018","unstructured":"Alatoom A, Sartawi M, Lawlor K, AbdelWareth L, Thomsen J, Nusair A, Mirza I. Persistent candidemia despite appropriate fungal therapy: First case of Candida auris from the United Arab Emirates. Int J Infect Dis. 2018;70:36\u20137. https:\/\/doi.org\/10.1016\/j.ijid.2018.02.005.","journal-title":"Int J Infect Dis"},{"key":"697_CR22","doi-asserted-by":"publisher","first-page":"638","DOI":"10.1128\/JCM.02202-16","volume":"55","author":"M Mizusawa","year":"2017","unstructured":"Mizusawa M, Miller H, Green R, Lee R, Durante M, Perkins R, et al. Can multidrug-resistant Candida auris be reliably identified in clinical microbiology laboratories? J Clin Microbiol. 2017;55:638\u201340. https:\/\/doi.org\/10.1128\/JCM.02202-16.","journal-title":"J Clin Microbiol"}],"container-title":["Mycopathologia"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s11046-022-00697-8.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s11046-022-00697-8\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s11046-022-00697-8.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,5,10]],"date-time":"2023-05-10T22:06:08Z","timestamp":1683756368000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s11046-022-00697-8"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2022,12,30]]},"references-count":22,"journal-issue":{"issue":"1-2","published-print":{"date-parts":[[2023,4]]}},"alternative-id":["697"],"URL":"https:\/\/doi.org\/10.1007\/s11046-022-00697-8","relation":{},"ISSN":["0301-486X","1573-0832"],"issn-type":[{"value":"0301-486X","type":"print"},{"value":"1573-0832","type":"electronic"}],"subject":[],"published":{"date-parts":[[2022,12,30]]},"assertion":[{"value":"19 April 2022","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"19 November 2022","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"30 December 2022","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"The authors have no competing interests to declare.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Conflict of interest"}},{"value":"Not applicable.","order":3,"name":"Ethics","group":{"name":"EthicsHeading","label":"Ethics Approval and Consent to Participate"}},{"value":"Written informed consent for publication of this case report was obtained from the patient.","order":4,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent for Publication"}}]}}