{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,8,28]],"date-time":"2025-08-28T12:09:55Z","timestamp":1756382995642},"reference-count":32,"publisher":"Springer Science and Business Media LLC","issue":"8","license":[{"start":{"date-parts":[[2012,5,23]],"date-time":"2012-05-23T00:00:00Z","timestamp":1337731200000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["World J Microbiol Biotechnol"],"published-print":{"date-parts":[[2012,8]]},"DOI":"10.1007\/s11274-012-1077-3","type":"journal-article","created":{"date-parts":[[2012,7,10]],"date-time":"2012-07-10T00:18:10Z","timestamp":1341879490000},"page":"2671-2678","source":"Crossref","is-referenced-by-count":11,"title":["Phenotypic and genetic characterization of Vibrio cholerae O1 clinical isolates collected through national antimicrobial resistance surveillance network in Nepal"],"prefix":"10.1007","volume":"28","author":[{"given":"Geeta","family":"Shakya","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Dong Wook","family":"Kim","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"John D.","family":"Clemens","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sarala","family":"Malla","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bishnu Prasad","family":"Upadhyaya","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shyam Prakash","family":"Dumre","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sirjana Devi","family":"Shrestha","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shailaja","family":"Adhikari","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Supriya","family":"Sharma","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nisha","family":"Rijal","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sanjaya K.","family":"Shrestha","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Carl","family":"Mason","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Palpasa","family":"Kansakar","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2012,5,23]]},"reference":[{"key":"1077_CR1","doi-asserted-by":"crossref","first-page":"699","DOI":"10.3201\/eid1704.101973","volume":"17","author":"A Ali","year":"2011","unstructured":"Ali A, Chen Y, Johnson JA, Redden E, Mayette Y, Rashid MH, Stine OC, Morris JG (2011) Recent clonal origin of cholera in Haiti. Emerg Infect Dis 17:699\u2013701","journal-title":"Emerg Infect Dis"},{"key":"1077_CR2","doi-asserted-by":"crossref","first-page":"568","DOI":"10.3201\/eid1703.101176","volume":"17","author":"K Bhattacharya","year":"2011","unstructured":"Bhattacharya K, Kanungo S, Sur D, Sarkar BL, Manna B, Lopez AL, Bhattacharya M, Nandy S, Niyogi SK (2011) Tetracycline-resistant Vibrio cholerae O1, Kolkata, India. Emerg Infect Dis 17:568\u2013569","journal-title":"Emerg Infect Dis"},{"key":"1077_CR3","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1056\/NEJMoa1012928","volume":"364","author":"C Chin","year":"2011","unstructured":"Chin C, Sorenson J, Harris JB, Robins WP, Charles RC, Jean-Charles RR, Bullard J, Webster DR, Kasarskis A, Peluso P, Paxinos EE, Yamaichi Y, Calderwood SB, Mekalanos JJ, Schadt EE, Waldor MK (2011) The origin of the Haitian cholera outbreak strain. N Engl J Med 364:33\u201342","journal-title":"N Engl J Med"},{"key":"1077_CR4","doi-asserted-by":"crossref","first-page":"763","DOI":"10.1099\/jmm.0.017939-0","volume":"59","author":"SY Choi","year":"2010","unstructured":"Choi SY, Lee JH, Jeon YS, Lee HR, Kim EJ, Ansaruzzaman M, Bhuiyan NA, Endtz HP, Niyogi SK, Sarkar BL, Nair GB, Nguyen BM, Hien NT, Czerkinsky C, Clemens JD, Chun J, Kim DW (2010) Multilocus variable-number tandem repeat analysis of Vibrio cholerae O1 El Tor strains harbouring classical toxin B. J Med Microbiol 59:763\u2013769","journal-title":"J Med Microbiol"},{"key":"1077_CR5","unstructured":"CLSI (2007) Performance standards for antimicrobil susceptibility testing; seventeenth informational supplement: CLSI document M100-S17 (ISBN 1-56238-625-5). Clinical and Laboratory Standard Institute, Wayne Pennsylvania"},{"key":"1077_CR6","doi-asserted-by":"crossref","first-page":"4249","DOI":"10.1128\/JCM.38.11.4249-4253.2000","volume":"38","author":"P Garg","year":"2000","unstructured":"Garg P, Nandy RK, Chaudhury YP, Chowdhury NR, De K, Ramamurthy T, Yamasaki S, Bhattacharya SK, Takeda Y, Nair GB (2000) Emergence of Vibrio cholerae O1 biotype El Tor serotype Inaba from the prevailing O1 Ogawa serotype strains in India. J Clin Microbiol 38:4249\u20134253","journal-title":"J Clin Microbiol"},{"key":"1077_CR7","doi-asserted-by":"crossref","first-page":"196","DOI":"10.1111\/j.1574-6968.2008.01352.x","volume":"288","author":"R Ghosh","year":"2008","unstructured":"Ghosh R, Nair GB, Tang L, Morris JG, Sharma NC, Ballal M, Garg P, Ramamurthy T, Stine OC (2008) Epidemiological study of Vibrio cholerae using variable number of tandem repeats. FEMS Microbiol Lett 288:196\u2013201","journal-title":"FEMS Microbiol Lett"},{"key":"1077_CR8","doi-asserted-by":"crossref","first-page":"281","DOI":"10.1007\/s11274-009-0171-7","volume":"26","author":"AK Goel","year":"2010","unstructured":"Goel AK, Jain M, Kumar P, Jiang SC (2010) Molecular characterization of Vibrio cholerae outbreak strains with altered El Tor biotype from southern India. World J Microbiol Biotechnol 26:281\u2013287","journal-title":"World J Microbiol Biotechnol"},{"key":"1077_CR9","doi-asserted-by":"crossref","unstructured":"Hendriksen RS, Price LB, Schupp JM, Gillece JD, Kaas RS, Engelthaler DM, Bortolaia V, Pearson T, Waters AE, Upadhyay BP, Shrestha SD, Adhikari S, Shakya G, Keim PS, Aarestrupa FM (2011) Population genetics of Vibrio cholerae from Nepal in 2010: evidence on the origin of the Haitian outbreak. mBio 2:e00157-11","DOI":"10.1128\/mBio.00157-11"},{"key":"1077_CR10","doi-asserted-by":"crossref","first-page":"305","DOI":"10.1093\/tropej\/42.5.305","volume":"42","author":"T Ise","year":"1996","unstructured":"Ise T, Pokharel BM, Rawa S, Shrestha RS, Dhakhwa JR (1996) Outbreaks of cholera in Kathmandu Valley in Nepal. J Trop Pediatr 42:305\u2013307","journal-title":"J Trop Pediatr"},{"key":"1077_CR11","doi-asserted-by":"crossref","first-page":"163","DOI":"10.3855\/jidc.1016","volume":"5","author":"P Kansakar","year":"2011","unstructured":"Kansakar P, Baral P, Malla S, Ghimire GR (2011) Antimicrobial susceptibilities of enteric bacterial pathogens isolated in Kathmandu, Nepal, during 2002\u20132004. J Infect Dev Ctries 5:163\u2013168","journal-title":"J Infect Dev Ctries"},{"key":"1077_CR12","doi-asserted-by":"crossref","first-page":"48","DOI":"10.1128\/CMR.8.1.48","volume":"8","author":"JB Kaper","year":"1995","unstructured":"Kaper JB, Morris JG, Levine MM (1995) Cholera. Clin Microbiol Rev 8:48\u201386","journal-title":"Clin Microbiol Rev"},{"key":"1077_CR13","doi-asserted-by":"crossref","first-page":"185","DOI":"10.7883\/yoken.63.185","volume":"63","author":"R Karki","year":"2010","unstructured":"Karki R, Bhatta DR, Malla S, Dumre SP (2010) Cholera incidence among patients with diarrhea visiting National Public Health laboratory, Nepal. Jpn J Infect Dis 63:185\u2013187","journal-title":"Jpn J Infect Dis"},{"key":"1077_CR14","unstructured":"Karki R, Bhatta DR, Malla S, Dumre SP, Upadhyay BP, Dahal S, Acharya D (2011) Resistotypes of Vibrio cholerae O1 Ogawa biotype El Tor in Kathmandu, Nepal. Nepal Med Coll J 13(2) (in press)"},{"key":"1077_CR15","doi-asserted-by":"crossref","first-page":"397","DOI":"10.1099\/jmm.0.023051-0","volume":"60","author":"M Kitaoka","year":"2011","unstructured":"Kitaoka M, Miyata ST, Unterweger D, Pukatzki S (2011) Antibiotic resistance mechanisms of Vibrio cholerae. J Med Microbiol 60:397\u2013407","journal-title":"J Med Microbiol"},{"key":"1077_CR16","doi-asserted-by":"crossref","first-page":"234","DOI":"10.1099\/jmm.0.002089-0","volume":"58","author":"P Kumar","year":"2009","unstructured":"Kumar P, Jain M, Goel AK, Bhadauria S, Sharma SK, Kamboj DV, Singh L, Ramamurthy T, Nair GB (2009) A large cholera outbreak due to a new cholera toxin variant of the Vibrio cholerae O1 El Tor biotype in Orissa, Eastern India. J Med Microbiol 58:234\u2013238","journal-title":"J Med Microbiol"},{"key":"1077_CR17","doi-asserted-by":"crossref","first-page":"165","DOI":"10.1099\/jmm.0.46287-0","volume":"55","author":"JH Lee","year":"2006","unstructured":"Lee JH, Han KH, Choi SY, Lucas ME, Mondlane C, Ansaruzzaman M, Nair GB, Sack DA, Seidlein LV, Clemens JD, Song M, Chun J, The Mozambique Cholera Vaccine Demonstration Project Coordination Group, Kim DW (2006) Multilocus sequence typing (MLST) analysis of Vibrio cholerae O1 El Tor isolates from Mozambique that harbour the classical CTX prophage. J Med Microbiol 55:165\u2013170","journal-title":"J Med Microbiol"},{"key":"1077_CR18","doi-asserted-by":"crossref","first-page":"260","DOI":"10.1099\/jmm.0.46868-0","volume":"56","author":"SS Mohapatra","year":"2007","unstructured":"Mohapatra SS, Ramachandran D, Mantri CK, Singh DV (2007) Characterization of the genetic background of Vibrio cholerae O1 biotype El Tor serotype Inaba strains isolated in Trivandrum, Southern India. J Med Microbiol 56:260\u2013265","journal-title":"J Med Microbiol"},{"key":"1077_CR19","doi-asserted-by":"crossref","first-page":"708","DOI":"10.1099\/jmm.0.017624-0","volume":"59","author":"M Morita","year":"2010","unstructured":"Morita M, Ohnishi M, Arakawa E, Yamamoto S, Nair GB, Matsushita S, Yokoyama K, Kai A, Seto K, Watanabe H, Izumiya H (2010) Emergence and genetic diversity of El Tor Vibrio cholerae O1 that possess classical biotype ctxB among travel-associated cases of cholera in Japan. J Med Microbiol 59:708\u2013712","journal-title":"J Med Microbiol"},{"key":"1077_CR20","doi-asserted-by":"crossref","first-page":"462","DOI":"10.1038\/nature10392","volume":"477","author":"A Mutreja","year":"2011","unstructured":"Mutreja A, Kim DW, Thomson NR, Connor TR, Lee JH, Kariuki S, Croucher NJ, Choi SY, Harris SR, Lebens M, Niyogi SK, Kim EJ, Ramamurthy T, Chun J, Wood JL, Clemens JD, Czerkinsky C, Nair GB, Holmgren J, Parkhill J, Dougan G (2011) Evidence for several waves of global transmission in the seventh cholera pandemic. Nature 477:462\u2013465","journal-title":"Nature"},{"key":"1077_CR21","doi-asserted-by":"crossref","first-page":"4211","DOI":"10.1128\/JCM.01304-06","volume":"44","author":"GB Nair","year":"2006","unstructured":"Nair GB, Qadri F, Holmgren J, Svennerholm AM, Safa A, Bhuiyan NA, Ahmad QS, Faruque SM, Faruque ASG, Takeda Y, Sack DA (2006) Cholera due to altered El Tor strains of Vibrio cholerae O1 in Bangladesh. J Clin Microbiol 44:4211\u20134213","journal-title":"J Clin Microbiol"},{"key":"1077_CR22","doi-asserted-by":"crossref","first-page":"1568","DOI":"10.1128\/JCM.02040-08","volume":"47","author":"BM Nguyen","year":"2009","unstructured":"Nguyen BM, Lee JH, Cuong NT, Choi SY, Hien NT, Anh DD, Lee HR, Ansaruzzaman M, Endtz HP, Chun J, Lopez AL, Czerkinsky C, Clemens JD, Kim DW (2009) Cholera outbreaks caused by an altered Vibrio cholerae O1 El Tor biotype strain producing classical cholera toxin B in Vietnam in 2007 to 2008. J Clin Microbiol 47:1568\u20131571","journal-title":"J Clin Microbiol"},{"key":"1077_CR23","doi-asserted-by":"crossref","first-page":"1804","DOI":"10.3201\/eid1611.100568","volume":"16","author":"ML Quilici","year":"2010","unstructured":"Quilici ML, Massenet D, Gake B, Bwalki B, Olson DM (2010) Vibrio cholerae O1 Variant with reduced susceptibility to ciprofloxacin, Western Africa. Emerg Infect Dis 16:1804\u20131805","journal-title":"Emerg Infect Dis"},{"key":"1077_CR24","first-page":"695","volume":"128","author":"A Raychoudhuri","year":"2008","unstructured":"Raychoudhuri A, Mukhopadhyay AK, Ramamurthy T, Nandy RK, Takeda Y, Nair GB (2008) Biotyping of Vibrio cholerae O1: time to redefine the scheme. Indian J Med Res 128:695\u2013698","journal-title":"Indian J Med Res"},{"key":"1077_CR25","doi-asserted-by":"crossref","first-page":"2113","DOI":"10.3201\/eid1711.110794","volume":"17","author":"AR Reimer","year":"2011","unstructured":"Reimer AR, Domselaar GV, Stroika S, Walker M, Kent H, Tarr C, Talkington D, Rowe L, Olsen-Rasmussen M, Frace M, Sammons S, Dahourou GA, Boncy J, Smith AM, Mabon P, Petkau A, Graham M, Gilmour MW, Gerner-Smidt P (2011) Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa. Emerg Infect Dis 17:2113\u20132121","journal-title":"Emerg Infect Dis"},{"key":"1077_CR26","doi-asserted-by":"crossref","first-page":"46","DOI":"10.1016\/j.tim.2009.10.003","volume":"18","author":"A Safa","year":"2010","unstructured":"Safa A, Nair GB, Richard Y, Kong C (2010) Evolution of new variants of Vibrio cholerae O1. Trends Microbiol 18:46\u201354","journal-title":"Trends Microbiol"},{"key":"1077_CR27","doi-asserted-by":"crossref","first-page":"831","DOI":"10.3201\/eid1405.071116","volume":"14","author":"OC Stine","year":"2008","unstructured":"Stine OC, Alam M, Tang L, Nair GB, Siddique AK, Faruque SM, Huq A, Colwell R, Sack RB, Morris JG Jr (2008) Seasonal cholera from multiple small outbreaks, rural Bangladesh. Emerg Infect Dis 14:831\u2013833","journal-title":"Emerg Infect Dis"},{"key":"1077_CR28","doi-asserted-by":"crossref","first-page":"2566","DOI":"10.1073\/pnas.89.7.2566","volume":"89","author":"UH Stroeher","year":"1992","unstructured":"Stroeher UH, Karageorgos LE, Morona R, Manning PA (1992) Serotype conversion in Vibrio cholerae O1. Proc Natl Acad Sci USA 89:2566\u20132570","journal-title":"Proc Natl Acad Sci USA"},{"key":"1077_CR29","first-page":"138","volume":"3","author":"MD Tamang","year":"2005","unstructured":"Tamang MD, Sharma N, Makaju RK, Sarma AN, Koju R, Nepali N, Mishra SK (2005) An outbreak of El Tor cholera in Kavre district, Nepal. Kathmandu Univ Med J (KUMJ) 3:138\u2013142","journal-title":"Kathmandu Univ Med J (KUMJ)"},{"key":"1077_CR30","doi-asserted-by":"crossref","first-page":"305","DOI":"10.1080\/09603120600734303","volume":"16","author":"AK Tamrakar","year":"2006","unstructured":"Tamrakar AK, Goel AK, Kamboj DV, Singh L (2006) Surveillance methodology for Vibrio cholerae in environmental samples. Int J Environ Health Res 16:305\u2013312","journal-title":"Int J Environ Health Res"},{"key":"1077_CR31","first-page":"387","volume":"133","author":"MN Ubol","year":"2011","unstructured":"Ubol MN, Srimanote P, Chongsa-nguan M, Indrawattana N, Sookrung N, Tapchaisiri P, Yamakazi S, Bodhidatta L, Eampokalap H, Hayashi H, Nair GB, Takeda Y, Chaicumpa W (2011) Hybrid and El Tor variant biotypes of Vibrio cholerae O1 in Thailand. Indian J Med Res 133:387\u2013394","journal-title":"Indian J Med Res"},{"key":"1077_CR32","unstructured":"World Health Organization W (1993) Guidelines for cholera control"}],"container-title":["World Journal of Microbiology and Biotechnology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s11274-012-1077-3.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1007\/s11274-012-1077-3\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s11274-012-1077-3","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,6,24]],"date-time":"2023-06-24T05:37:42Z","timestamp":1687585062000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/s11274-012-1077-3"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2012,5,23]]},"references-count":32,"journal-issue":{"issue":"8","published-print":{"date-parts":[[2012,8]]}},"alternative-id":["1077"],"URL":"https:\/\/doi.org\/10.1007\/s11274-012-1077-3","relation":{},"ISSN":["0959-3993","1573-0972"],"issn-type":[{"value":"0959-3993","type":"print"},{"value":"1573-0972","type":"electronic"}],"subject":[],"published":{"date-parts":[[2012,5,23]]}}}