{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,8,2]],"date-time":"2025-08-02T18:53:49Z","timestamp":1754160829100,"version":"3.41.2"},"reference-count":105,"publisher":"Springer Science and Business Media LLC","issue":"7","license":[{"start":{"date-parts":[[2025,7,1]],"date-time":"2025-07-01T00:00:00Z","timestamp":1751328000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2025,7,1]],"date-time":"2025-07-01T00:00:00Z","timestamp":1751328000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["World J Microbiol Biotechnol"],"published-print":{"date-parts":[[2025,7]]},"DOI":"10.1007\/s11274-025-04465-w","type":"journal-article","created":{"date-parts":[[2025,7,11]],"date-time":"2025-07-11T01:09:24Z","timestamp":1752196164000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Can probiotics be protective and growth-promoting to coffee plants?"],"prefix":"10.1007","volume":"41","author":[{"given":"Guilherme Peixoto","family":"de Freitas","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Fl\u00e1via Rodrigues Alves","family":"Patricio","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Rafaela Carvalho","family":"Vargas","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wagner","family":"Bettiol","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2025,7,11]]},"reference":[{"key":"4465_CR1","doi-asserted-by":"publisher","first-page":"2300614","DOI":"10.1002\/jobm.202300614","volume":"64","author":"AA Akinsemolu","year":"2024","unstructured":"Akinsemolu AA, Onyeaka H, Odion S, Adebanjo I (2024) Exploring Bacillus subtilis: ecology, biotechnological applications, and future prospects. J Basic Microbiol 64:2300614. https:\/\/doi.org\/10.1002\/jobm.202300614","journal-title":"J Basic Microbiol"},{"key":"4465_CR2","doi-asserted-by":"publisher","first-page":"2447","DOI":"10.3390\/plants13172447","volume":"13","author":"F Angelotti","year":"2024","unstructured":"Angelotti F, Hamada E, Bettiol W (2024) A comprehensive review of climate change and plant diseases in Brazil. Plants 13:2447. https:\/\/doi.org\/10.3390\/plants13172447","journal-title":"Plants"},{"key":"4465_CR3","doi-asserted-by":"publisher","unstructured":"Asyiah IN, Mudakir I, Hoesain M, Pradana AP, Djunaidy A, Sari RF (2020) Consortium of endophytic bacteria and rhizobacteria effectively suppresses the population of Pratylenchus coffeae and promotes the growth of robusta coffee. Biodiversitas J Biol Divers 21:10. https:\/\/doi.org\/10.13057\/biodiv\/d211032","DOI":"10.13057\/biodiv\/d211032"},{"key":"4465_CR4","doi-asserted-by":"publisher","unstructured":"Badel JL, Zambolim L (2019) Coffee bacterial diseases: a plethora of scientific opportunities. Plant Pathol 68:411\u2013425. https:\/\/doi.org\/10.1111\/ppa.12966","DOI":"10.1111\/ppa.12966"},{"key":"4465_CR5","unstructured":"Baker CJ, Stavely JR, Mock N (1985) Biocontrol of bean rust by Bacillus subtilis under field conditions. Plant Dis 69:770\u2013772"},{"key":"4465_CR6","unstructured":"Bettiol W, Varzea VMP (1992) Controle biol\u00f3gico Da ferrugem (Hemileia vastatrix) do Cafeeiro com Bacillus subtilis Em condi\u00e7\u00f5es controladas. Fitopatologia Brasileira 17:91\u201395"},{"key":"4465_CR7","unstructured":"Bettiol W, Saito ML, Brand\u00e3o MSB (1994) Controle Da ferrugem do Cafeeiro com produtos \u00e0 base de Bacillus subtilis. Summa Phytopathologica 20:119\u2013123"},{"key":"4465_CR8","doi-asserted-by":"publisher","first-page":"33","DOI":"10.19103\/AS.2021.0093.02","volume-title":"Microbial bioprotectants for plant disease management","author":"W Bettiol","year":"2021","unstructured":"Bettiol W, Medeiros FHV, Chiaramonte JB, Mendes R (2021) Advances in screening approaches for the development of microbial bioprotectants to control plant diseases. In: K\u00f6hl J, Ravensberg WJ (eds) Microbial bioprotectants for plant disease management. Burleigh Dodds, Cambridge, pp 33\u201386. https:\/\/doi.org\/10.19103\/AS.2021.0093.02"},{"key":"4465_CR9","doi-asserted-by":"publisher","unstructured":"Blake C, Christensen MN, Kov\u00e1cs \u00c1T (2021) Molecular aspects of plant growth promotion and protection by Bacillus subtilis. Mol Plant-Microbe Interact 34:15\u201325. https:\/\/doi.org\/10.1094\/MPMI-08-20-0225-CR","DOI":"10.1094\/MPMI-08-20-0225-CR"},{"key":"4465_CR10","doi-asserted-by":"publisher","unstructured":"Bolanos-Carriel C, Soto DV (2022) Persistence of Bacillus thuringiensis and Bacillus pumilus potential biological control agents of the coffee berry borer under field conditions of Puerto Rico. Revista Ciencia Y Agricultura 19:45\u201356. https:\/\/doi.org\/10.19053\/01228420.v19.n3.2022.14685","DOI":"10.19053\/01228420.v19.n3.2022.14685"},{"key":"4465_CR11","unstructured":"Cacefo V, Ara\u00fajo FF, Pacheco AC (2016) Biological control of Hemileia vastatrix berk. & Broome with Bacillus subtilis Cohn and biochemical changes in the coffee. Coffee Sci 11:567\u2013574"},{"key":"4465_CR12","doi-asserted-by":"publisher","unstructured":"Canarini A, Kaiser C, Merchant A, Richter A, Wanek W (2019) Root exudation of primary metabolites: mechanisms and their roles in plant responses to environmental stimuli. Front Plant Sci 10:157. https:\/\/doi.org\/10.3389\/fpls.2019.00157","DOI":"10.3389\/fpls.2019.00157"},{"key":"4465_CR13","doi-asserted-by":"publisher","unstructured":"Canto A, Herrera CM (2012) Micro-organisms behind the pollination scenes: microbial imprint on floral nectar sugar variation in a tropical plant community. Ann Botany 110:1173\u20131183. https:\/\/doi.org\/10.1093\/aob\/mcs183","DOI":"10.1093\/aob\/mcs183"},{"key":"4465_CR14","doi-asserted-by":"publisher","unstructured":"Castro MT, Ferreira ADCL, Nascimento IN, Rocha GT, Celestino MF, Freire IA, Moreira ICF, Gomes GC, Cunha BBR, Montalv\u00e3o SCL, Moreira FM, Monnerat RG (2025) Endophytic Bacillus spp. Of coffee plants (Coffea Arabica L.) and its potential in the biocontrol Of phytopathogenic fungi and Lepidoptera larvae. Egypt J Biol Pest Control 38:8. https:\/\/doi.org\/10.1186\/s41938-025-00846-3","DOI":"10.1186\/s41938-025-00846-3"},{"key":"4465_CR15","first-page":"273","volume-title":"Pesticides in the modern world\u2013 pesticide use and management","author":"H Cawoy","year":"2011","unstructured":"Cawoy H, Bettiol W, Fickers P, Ongena M (2011) Bacillus based biological control of plant diseases. In: Stoytcheva M (ed) Pesticides in the modern world\u2013 pesticide use and management. InTech, Rijeka, pp 273\u2013302"},{"key":"4465_CR16","doi-asserted-by":"publisher","unstructured":"Chagas Junior AF, Braga Junior GM, Lima CA, Martins ALL, Souza MC, Chagas LFB (2022) Bacillus subtilis Como inoculante promotor de Crescimento vegetal Em Soja. Diversitas J 7:1\u201316. https:\/\/doi.org\/10.48017\/dj.v7i1.2071","DOI":"10.48017\/dj.v7i1.2071"},{"key":"4465_CR17","doi-asserted-by":"publisher","unstructured":"Choudhary DK, Johri BN (2009) Interactions of Bacillus spp. And plants\u2013with special reference to induced systemic resistance (ISR). Microbiol Res 164:493\u2013513. https:\/\/doi.org\/10.1016\/j.micres.2008.08.007","DOI":"10.1016\/j.micres.2008.08.007"},{"key":"4465_CR19","doi-asserted-by":"publisher","unstructured":"Cisneros -RCA, Franco JM, Realpe-Fern\u00e1ndez M, Fuenmayor JC (2017) Influencia de microorganismos en la disponibilidad de f\u00f3sforo en pl\u00e1ntulas de caf\u00e9 (Coffea arabica). Biotecnolog\u00eda en el Sector Agropecuario y Agroindustrial 15:19\u201326. https:\/\/doi.org\/10.18684\/BSAA(15)11-18","DOI":"10.18684\/BSAA(15)11-18"},{"key":"4465_CR18","doi-asserted-by":"publisher","unstructured":"Cisneros-Rojas CA, Prager MS, Menjivar-Flores JC (2017) Effect of phosphate solubilizing bacteria on the development of coffee seedlings. Agronom\u00eda Mesoamericana 28:149\u2013158. https:\/\/doi.org\/10.15517\/am.v28i1.22021","DOI":"10.15517\/am.v28i1.22021"},{"key":"4465_CR20","doi-asserted-by":"publisher","unstructured":"Cordaillat-Simmons M, Rouanet A, Pot B (2020) Live biotherapeutic products: the importance of a defined regulatory framework. Exp Mol Med 52:1397\u20131406. https:\/\/doi.org\/10.1038\/s12276-020-0437-6","DOI":"10.1038\/s12276-020-0437-6"},{"key":"4465_CR21","doi-asserted-by":"crossref","unstructured":"Corey JS (2017) Evolution of host resistance to insect pathogens. Curr Opin Insect Sci 21:54\u201359","DOI":"10.1016\/j.cois.2017.04.008"},{"key":"4465_CR23","doi-asserted-by":"publisher","unstructured":"Cristancho MA, Rozo Y, Escobar C, Rivillas CA, Gait\u00e1n AL (2012) Outbreak of coffee leaf rust (Hemileia vastatrix) in Colombia. New Disease Rep 25:19. https:\/\/doi.org\/10.5197\/j.2044-0588.2012.025.019]","DOI":"10.5197\/j.2044-0588.2012.025.019]"},{"key":"4465_CR22","unstructured":"Cristancho-Ardila MA, Leguizam\u00f3n-Caycedo JE (1995) Efecto protector de la bacteria Bacillus thuringiensis en plantas de caf\u00e9 contra el desarrollo de Hemileia vastatrix Berk. y Br. Cenicaf\u00e9 46:140\u201315"},{"key":"4465_CR24","doi-asserted-by":"publisher","unstructured":"Cui L, Hanika K, Visser RGF, Bai Y (2020) Improving pathogen resistance by exploiting plant susceptibility genes in coffee (Coffea spp). Agronomy 10:1928. https:\/\/doi.org\/10.3390\/agronomy10121928","DOI":"10.3390\/agronomy10121928"},{"key":"4465_CR25","doi-asserted-by":"publisher","unstructured":"Daivasikamani S, Rajanaika (2009) Biological control of coffee leaf rust pathogen, Hemileia vastatrix Berkeley and Broome using Bacillus subtilis and Pseudomonas fluorescens. J Biopesticides 2:94\u201398. https:\/\/doi.org\/10.57182\/jbiopestic.2.1.94-98","DOI":"10.57182\/jbiopestic.2.1.94-98"},{"key":"4465_CR26","doi-asserted-by":"publisher","unstructured":"Daranas N, Rosell\u00f3 G, Cabrefiga J, Donati I, Franc\u00e9s J, Badosa E, Spinelli F, Montesinos E, Bonaterra A (2019) Biological control of bacterial plant diseases with Lactobacillus plantarum strains selected for their broad-spectrum activity. Ann Appl Biol 174:92\u2013105. https:\/\/doi.org\/10.1111\/aab.12476","DOI":"10.1111\/aab.12476"},{"key":"4465_CR27","doi-asserted-by":"publisher","DOI":"10.1201\/9781315138138","volume-title":"Basic plant pathology methods","author":"OD Dhingra","year":"1995","unstructured":"Dhingra OD, Sinclair JB (1995) Basic plant pathology methods. CRC, Boca Raton. https:\/\/doi.org\/10.1201\/9781315138138"},{"key":"4465_CR28","doi-asserted-by":"publisher","unstructured":"Dorighello DV, Bettiol W, Maia NB, Leite RMVBC (2015) Controlling Asian soybean rust (Phakopsora pachyrhizi) with Bacillus spp. And coffee oil. Crop Prot 67:59\u201365. https:\/\/doi.org\/10.1016\/j.cropro.2014.09.017","DOI":"10.1016\/j.cropro.2014.09.017"},{"key":"4465_CR29","doi-asserted-by":"publisher","unstructured":"Dorighello DV, Forner C, Leite RMVBC, Bettiol W (2020) Management of Asian soybean rust with Bacillus subtilis in sequential and alternating fungicide applications. Australas Plant Pathol 49:79\u201386. https:\/\/doi.org\/10.1007\/s13313-019-00677-5","DOI":"10.1007\/s13313-019-00677-5"},{"key":"4465_CR30","doi-asserted-by":"publisher","unstructured":"Duong B, Marraccini P, Maeght J-L, Vaast P, Lebrun M, Duponnois R (2020) Coffee microbiota and its potential use in sustainable crop management. A review. Front Sustainable Food Syst 4:607935. https:\/\/doi.org\/10.3389\/fsufs.2020.607935","DOI":"10.3389\/fsufs.2020.607935"},{"key":"4465_CR31","doi-asserted-by":"publisher","unstructured":"Einloft TC, Oliveira PB, Veras FF, Welke JE, Mallmann CA, dilkin P, Dionello RG (2017) Effect of Bacillus spp. On Aspergillus Weterdijkiae growth, sporulation and Ochratoxin A production in green-coffee medium. Food Sci Technol 37:24\u201327. https:\/\/doi.org\/10.1590\/1678-457X.05617","DOI":"10.1590\/1678-457X.05617"},{"key":"4465_CR32","doi-asserted-by":"publisher","unstructured":"Erg\u00fcn D, Tartar G, Yazgan-Karata\u015f A (2024) B. subtilis probiotics for humans, animals and plants: mechanisms, applications and prospects. Bacillus subtilis - functionalities and emerging applications. IntechOpen. https:\/\/doi.org\/10.5772\/intechopen.1007721","DOI":"10.5772\/intechopen.1007721"},{"key":"4465_CR33","unstructured":"Eskes AB (19890 resistance. In: Kushalappa AC, Eskes AB (eds) Coffee rust: epidemiology, resistance and management. CRC. Boca Raton Fl"},{"key":"4465_CR34","doi-asserted-by":"publisher","unstructured":"Ezema C (2013) Probiotics in animal production: A review. J Veterinary Med Anim Health 5:308\u2013316. https:\/\/doi.org\/10.5897\/JVMAH2013.0201","DOI":"10.5897\/JVMAH2013.0201"},{"key":"4465_CR35","doi-asserted-by":"publisher","unstructured":"Faria MR, Costa LSAS, Chiaramonte JB, Bettiol W, Mendes R (2020) The rhizosphere microbiome: functions, dynamics, and role in plant protection. Trop Plant Pathol 46:13\u201325. https:\/\/doi.org\/10.1007\/s40858-020-00390-5","DOI":"10.1007\/s40858-020-00390-5"},{"key":"4465_CR36","doi-asserted-by":"publisher","unstructured":"Feng K, Cai Z, Ding T, Yan H, Liu X, Zhang Z (2019) Effects of potassium-solubilizing and photosynthetic bacteria on tolerance to salt stress in maize. J Appl Microbiol 126:1530\u20131540. https:\/\/doi.org\/10.1111\/jam.14220","DOI":"10.1111\/jam.14220"},{"key":"4465_CR37","doi-asserted-by":"publisher","unstructured":"Fonseca LM, Domingues JP, Dima AM (2020) Mapping the sustainable development goals relationships. Sustainability 12:3359. https:\/\/doi.org\/10.3390\/su12083359","DOI":"10.3390\/su12083359"},{"key":"4465_CR38","doi-asserted-by":"publisher","unstructured":"Fonseca MC, Bossolani JW, Oliveira SL, Moretti LG, Portugal JR, Scudeletti D, Oliveira EF, Crusciol CAC (2022) Bacillus subtilis inoculation improves nutrient uptake and physiological activity in sugarcane under drought stress. Microorganisms 10:809. https:\/\/doi.org\/10.3390\/microorganisms10040809","DOI":"10.3390\/microorganisms10040809"},{"key":"4465_CR40","volume-title":"Compendium of coffee diseases and pests","author":"AL Gaitan","year":"2015","unstructured":"Gaitan AL, Cristancho MA, Caicedo BLC, Rivillas CA, G\u00f3mez GC (2015) Compendium of coffee diseases and pests. The American Phytopathological Society, St. Paul, Mn"},{"key":"4465_CR39","doi-asserted-by":"publisher","unstructured":"Gajbhiye MH, Kapadnis BP (2016) Antifungal-activity-producing lactic acid bacteria as biocontrol agents in plants. Biocontrol Sci Technol 26:1451\u20131470. https:\/\/doi.org\/10.1080\/09583157.2016.1213793","DOI":"10.1080\/09583157.2016.1213793"},{"key":"4465_CR41","doi-asserted-by":"crossref","unstructured":"Ghini R, Hamada E, Bettiol W (2008) Climate change and plant diseases. Scientia Agricola 65:98\u2013107","DOI":"10.1590\/S0103-90162008000700015"},{"key":"4465_CR42","doi-asserted-by":"publisher","unstructured":"Ghini R, Bettiol W, Hamada E (2011) Diseases in tropical and plantation crops as affected by climate changes: current knowledge and perspectives. Plant Pathol 60:122\u2013132. https:\/\/doi.org\/10.1111\/j.1365-3059.2010.02403.x","DOI":"10.1111\/j.1365-3059.2010.02403.x"},{"key":"4465_CR43","doi-asserted-by":"publisher","unstructured":"Giassi V, Kiritani C, Kupper KC (2016) Bacteria as growth-promoting agents for citrus rootstocks. Microbiol Res 190:46\u201354. https:\/\/doi.org\/10.1016\/j.micres.2015.12.006","DOI":"10.1016\/j.micres.2015.12.006"},{"key":"4465_CR44","doi-asserted-by":"publisher","unstructured":"Haddad F, Maffia LA, Mizubuti ES, Teixeira H (2009) Biological control of coffee rust by antagonistic bacteria under field conditions in Brazil. Biol Control 49:114\u2013119. https:\/\/doi.org\/10.1016\/j.biocontrol.2009.02.004","DOI":"10.1016\/j.biocontrol.2009.02.004"},{"key":"4465_CR45","doi-asserted-by":"publisher","unstructured":"Haddad F, Saraiva RM, Mizubuti ES, Romeiro RS, Maffia LA (2013) Antifungal compounds as a mechanism to control Hemileia vastatrix by antagonistic bacteria. Trop Plant Pathol 38:398\u2013405. https:\/\/doi.org\/10.1590\/S1982-56762013000500004","DOI":"10.1590\/S1982-56762013000500004"},{"key":"4465_CR46","doi-asserted-by":"publisher","unstructured":"Haddad F, Saraiva RM, Mizubuti ESG, Romeiro RS, Maffia LA (2014) Isolation and selection of Hemileia vastatrix antagonists. Eur J Plant Pathol 139:763\u2013772. https:\/\/doi.org\/10.1007\/s10658-014-0430-9","DOI":"10.1007\/s10658-014-0430-9"},{"key":"4465_CR47","unstructured":"Hamed HA, Moustafa YA, Abdel-Aziz SM, Eldhateeb YAMM (2011) In vivo efficacy of lactic acid bacteria in biological control against Fusarium oxysporum for protection of tomato plant. Life Sci J 8:462\u2013468"},{"key":"4465_CR48","doi-asserted-by":"publisher","unstructured":"Harutyunyan N, Kushugulova A, Hovhannisyan N, Pepoyan A (2022) One health probiotics as biocontrol agents: one health tomato probiotics. Plants 11:1334. https:\/\/doi.org\/10.3390\/plants11101334","DOI":"10.3390\/plants11101334"},{"key":"4465_CR49","doi-asserted-by":"publisher","unstructured":"Hashem A, Tabassum B, Abd-Allah EF (2019) Bacillus subtilis: A plant-growth promoting rhizobacterium that also impacts biotic stress. Saudi J Biol Sci 26:1291\u20131297. https:\/\/doi.org\/10.1016\/j.sjbs.2019.05.004","DOI":"10.1016\/j.sjbs.2019.05.004"},{"key":"4465_CR50","doi-asserted-by":"publisher","unstructured":"Hou LW, Groenewald JZ, Pfenning LH, Yarden O, Crous PW, Cai L (2020) The phoma-like dilemma. Stud Mycol 96:309\u2013396. https:\/\/doi.org\/10.1016\/j.simyco.2020.05.001","DOI":"10.1016\/j.simyco.2020.05.001"},{"key":"4465_CR51","doi-asserted-by":"publisher","unstructured":"Jaini MFM, Roslan NF, Yusof MT, Saidi NB, Ramli N, Zainudin NAIM, Hashim AM (2022) Investigating the potential of endophytic lactic acid bacteria isolated from Papaya seeds as plant growth promoter and antifungal agent. Pertanika J Trop Agric Sci 45:207\u2013233. https:\/\/doi.org\/10.47836\/pjtas.45.1.12","DOI":"10.47836\/pjtas.45.1.12"},{"key":"4465_CR52","doi-asserted-by":"publisher","unstructured":"Kang SM, Radhakrishnan R, You YH, Khan AL, Park JM, Lee SM, Lee IJ (2015) Cucumber performance is improved by inoculation with plant growth-promoting microorganisms. Acta Agriculturae Scand Sect B\u2014Soil Plant Sci 65:36\u201344. https:\/\/doi.org\/10.1080\/09064710.2014.960889","DOI":"10.1080\/09064710.2014.960889"},{"key":"4465_CR53","doi-asserted-by":"publisher","unstructured":"Kharazian ZA, Jouzani GS, Aghdasi M, Khorvash M, Zamani M, Mohammadzadeh H (2017) Biocontrol potential of Lactobacillus strains isolated from corn silages against some plant pathogenic fungi. Biol Control 110:33\u201343. https:\/\/doi.org\/10.1016\/j.biocontrol.2017.04.004","DOI":"10.1016\/j.biocontrol.2017.04.004"},{"key":"4465_CR54","doi-asserted-by":"publisher","unstructured":"Kiep\u015b J, Dembczy\u0144ski R (2022) Current trends in the production of probiotic formulations. Foods 11:2330. https:\/\/doi.org\/10.3390\/foods11152330","DOI":"10.3390\/foods11152330"},{"key":"4465_CR55","doi-asserted-by":"publisher","unstructured":"Krysiak K, Konkol D, Korczy\u0144ski M (2021) Overview of the use of probiotics in poultry production. Animals 11:1620. https:\/\/doi.org\/10.3390\/ani11061620","DOI":"10.3390\/ani11061620"},{"key":"4465_CR56","unstructured":"Kushalappa AC (1989) Biology and epidemiology. In: Kushalappa AC, Eskes AB (eds) Coffee rust: epidemiology, resistance and management. CRC, Boca Raton Fl"},{"key":"4465_CR57","doi-asserted-by":"publisher","unstructured":"Lacerda JRM, Silva TF, Voll\u00fa RE, Marques JM, Seldin L (2016) Generally recognized as safe (GRAS) Lactococcus lactis strains associated with Lippia Sidoides cham. Are able to solubilize\/mineralize phosphate. SpringerPlus 5:828. https:\/\/doi.org\/10.1186\/s40064-016-2596-4","DOI":"10.1186\/s40064-016-2596-4"},{"key":"4465_CR58","doi-asserted-by":"publisher","unstructured":"Lamont JR, Wilkins O, Bywater-Ekeg\u00e4rd M, Smith DL (2017) From yogurt to yield: potential applications of lactic acid bacteria in plant production. Soil Biol Biochem 111:1\u20139. https:\/\/doi.org\/10.1016\/j.soilbio.2017.03.015","DOI":"10.1016\/j.soilbio.2017.03.015"},{"key":"4465_CR59","doi-asserted-by":"publisher","unstructured":"Limanska N, Ivanytsia T, Basiul O, Krylova K, Biscola V, Chobert JM, Ivanytsia V, Hartl\u00e9 T (2013) Effect of Lactobacillus plantarum on germination and growth of tomato seedlings. Acta Physiol Plant 35:1587\u20131595. https:\/\/doi.org\/10.1007\/s11738-012-1200-y","DOI":"10.1007\/s11738-012-1200-y"},{"key":"4465_CR60","doi-asserted-by":"publisher","unstructured":"Louca S, Polz MF, Mazel F, Albright MBN, Huber JA, O\u2019Connor MI, Ackermann M, Hahn AS, Srivastava DS, Crowe SA, Doebeli M, Parfrey LW (2018) Function and functional redundancy in microbial systems. Nat Ecol Evol 2:936\u2013943. https:\/\/doi.org\/10.1038\/s41559-018-0519-1","DOI":"10.1038\/s41559-018-0519-1"},{"key":"4465_CR61","doi-asserted-by":"publisher","unstructured":"Meira CAA, Rodrigues LHA, Moraes SAD (2009) Modelos de alerta Para o controle Da ferrugem-do-cafeeiro Em Lavouras com Alta Carga pendente. Pesquisa Agropecu\u00e1ria Brasileira 44:233\u2013242. https:\/\/doi.org\/10.1590\/S0100-204X2009000300003","DOI":"10.1590\/S0100-204X2009000300003"},{"key":"4465_CR62","unstructured":"Morgan FL (1963) Infection Inhibition and germ-tube Lysis of three cereal rusts by Bacillus pumilus. Phytopathology 53:1346\u20131348"},{"key":"4465_CR63","unstructured":"Nelson SC (2008) Cercospora leaf spot and berry blotch of coffee. University of Hawai\u02bbi at M\u0101noa. College of Tropical Agriculture and Human Resources, Cooperative Extension Service"},{"key":"4465_CR64","doi-asserted-by":"publisher","unstructured":"Nunes PSO, Medeiros FHV, Oliveira TS, Zago JRA, Bettiol W (2023) Bacillus subtilis and Bacillus licheniformis promote tomato growth. Brazilian J Microbiol 54:397\u2013406. https:\/\/doi.org\/10.1007\/s42770-022-00874-3","DOI":"10.1007\/s42770-022-00874-3"},{"key":"4465_CR65","doi-asserted-by":"publisher","unstructured":"Nunes PSO, Lacerda-Junior GV, Mascarin GM, Guimar\u00e3es RA, Medeiros FHV, Arthurs S, Bettiol W (2024) Microbial consortia of biological products: do they have a future? Biol Control 188:105439. https:\/\/doi.org\/10.1016\/j.biocontrol.2024.105439","DOI":"10.1016\/j.biocontrol.2024.105439"},{"key":"4465_CR66","doi-asserted-by":"publisher","unstructured":"O\u2019Brien PA (2017) Biological control of plant diseases. Australas Plant Pathol 46:293\u2013304. https:\/\/doi.org\/10.1007\/s13313-017-0481-4","DOI":"10.1007\/s13313-017-0481-4"},{"key":"4465_CR67","doi-asserted-by":"publisher","unstructured":"Olanrewaju OS, Glick BR, Babalola OO (2017) Mechanisms of action of plant growth promoting bacteria. World J Microbiol Biotechnol 33:197. https:\/\/doi.org\/10.1007\/s11274-017-2364-9","DOI":"10.1007\/s11274-017-2364-9"},{"key":"4465_CR68","doi-asserted-by":"publisher","unstructured":"Olivoto T (2022) Lights, camera, pliman! An R package for plant image analysis. Methods Ecol Evol 13:789\u2013798. https:\/\/doi.org\/10.1111\/2041-210X.13803","DOI":"10.1111\/2041-210X.13803"},{"key":"4465_CR69","doi-asserted-by":"publisher","unstructured":"Ongena M, Jacques P (2008) Bacillus lipopeptides: versatile weapons for plant disease biocontrol. Trends Microbiol 16:115\u2013125. https:\/\/doi.org\/10.1016\/j.tim.2007.12.009","DOI":"10.1016\/j.tim.2007.12.009"},{"key":"4465_CR70","doi-asserted-by":"publisher","unstructured":"Ongena M, Jourdan E, Adam A, Paquot M, Brans A, Joris B, Arpigny J, Thonart P (2007) Surfactin and Fengycin lipopeptides of Bacillus subtilis as elicitors of induced systemic resistance in plants. Environ Microbiol 9:1084\u20131090. https:\/\/doi.org\/10.1111\/j.1462-2920.2006.01202.x","DOI":"10.1111\/j.1462-2920.2006.01202.x"},{"key":"4465_CR71","doi-asserted-by":"publisher","unstructured":"Parra-Arroyo L, Gonz\u00e1lez-Gonz\u00e1lez RB, Castillo-Zacar\u00edas C, Mart\u00ednez EMM, Sosa-Hern\u00e1ndez JE, Bilal M, Iqbal HMN, Barcel\u00f3 D, Parra-Sald\u00edvar R (2022) Highly hazardous pesticides and related pollutants: toxicological, regulatory, and analytical aspects. Sci Total Environ 807:151879. https:\/\/doi.org\/10.1016\/j.scitotenv.2021.151879","DOI":"10.1016\/j.scitotenv.2021.151879"},{"key":"4465_CR72","doi-asserted-by":"publisher","unstructured":"Patricio FRA, Beriam LOS, Santos JMF, Moraes A, Rossi A, Reis JCS, Almeida IMG (2021) Management of bacterial halo blight and other coffee crop diseases. Revis\u00e3o Anual De Patologia De Plantas 27:154\u2013173. https:\/\/doi.org\/10.31976\/0104-038321v270008","DOI":"10.31976\/0104-038321v270008"},{"key":"4465_CR73","doi-asserted-by":"publisher","unstructured":"Peixoto RS, Voolstra CR, Sweet M, Duarte CM, Carvalho S, Villela H, Lunshof JE, Gram L, Woodhams DC, Walter J, Roik A, Hentscel U, Thurber RV, Daisley B, Ushijima B, Daffonchio D, Costa R, Keller-Costa T, Bowman JS, Rosado A, Reid G, Mason CE, Walke JB, Thomas T, Berg G (2022) Harnessing the Microbiome to prevent global biodiversity loss. Nat Microbiol 7:1726\u20131735. https:\/\/doi.org\/10.1038\/s41564-022-01173-1","DOI":"10.1038\/s41564-022-01173-1"},{"key":"4465_CR74","doi-asserted-by":"publisher","unstructured":"Radhakrishnan R, Hashem A, Abd-Allah EF (2017) Bacillus: a biological tool for crop improvement through bio-molecular changes in adverse environments. Front Physiol 8:667. https:\/\/doi.org\/10.3389\/fphys.2017.00667","DOI":"10.3389\/fphys.2017.00667"},{"key":"4465_CR75","doi-asserted-by":"crossref","unstructured":"Ram RM, Keswani C, Bisen K, Tripathi R, Singh SP, Singh HB (2018) Biocontrol technology: eco-friendly approaches for sustainable agriculture. In: Tanveer T, Shaheen K, Parveen S, Misbah ZT, Babar MM, Gul A (eds) Omics technologies and Bio-Engineering. Academic, pp 177\u2013190","DOI":"10.1016\/B978-0-12-815870-8.00010-3"},{"key":"4465_CR76","doi-asserted-by":"publisher","unstructured":"Raman J, Kim JS, Choi KR, Eun H, Yang D, Ko YJ, Kim SJ (2022) Application of lactic acid bacteria (LAB) in sustainable agriculture: advantages and limitations. Int J Mol Sci 23:7784. https:\/\/doi.org\/10.3390\/ijms23147784","DOI":"10.3390\/ijms23147784"},{"key":"4465_CR77","doi-asserted-by":"publisher","unstructured":"Rodrigues LMR, Dest\u00e9fano SAL, Almeida IMGD, Beriam LOS, Braghini MT, Guerreiro Filho O (2019) Multiple resistance to bacterial halo blight and bacterial leaf spot in Coffea spp. Arquivos Do Instituto Biol\u00f3gico 86. https:\/\/doi.org\/10.1590\/1808-1657000632018","DOI":"10.1590\/1808-1657000632018"},{"key":"4465_CR78","doi-asserted-by":"publisher","unstructured":"Roveratti DS, Teixeira ARR, Moraes WBC (1989) Bacillus thuringiensis - a new perspective for an induced protection to coffee leaf rust. J Phytopathol 126:149\u2013159. https:\/\/doi.org\/10.1111\/j.1439-0434.1989.tb01098.x","DOI":"10.1111\/j.1439-0434.1989.tb01098.x"},{"key":"4465_CR79","unstructured":"Rutherford M, Phiri N (2006) Pests and diseases of coffee in Eastern africa: a technical and advisory manual. CABI, Wallingford, UK"},{"key":"4465_CR80","doi-asserted-by":"crossref","unstructured":"Rytter JL, Lukezic FL, Craig R, Mooman GW (1989) Biological control of geranium rust by Bacillus subtilis. Phytopathology 79:367\u2013370","DOI":"10.1094\/Phyto-79-367"},{"key":"4465_CR81","unstructured":"Santinato R, Silva VA, Santinato F (2013) Controle do complexo phoma\/ascochyta e de Mancha aureolada utilizando o fungicida\/bactericida biol\u00f3gico (Duo). Congresso Brasileiro de Pesquisas Cafeeiras, 39, 2013. Po\u00e7os de Caldas. Anais. Embrapa Caf\u00e9, Bras\u00edlia, DF"},{"key":"4465_CR82","doi-asserted-by":"publisher","unstructured":"Santoyo G, Guzm\u00e1n-Guzm\u00e1n P, Parra-Cota FI, Santos-Villalobos SDL, Orozco-Mosqueda MDC, Glick BR (2021) Plant growth stimulation by microbial consortia. Agronomy 11:219. https:\/\/doi.org\/10.3390\/agronomy11020219","DOI":"10.3390\/agronomy11020219"},{"key":"4465_CR83","doi-asserted-by":"publisher","unstructured":"Sera GH, Carvalho CHS, Rezende Abrah\u00e3o JC, Pozza EA, Matiello JB, Almeida SR, Bartelega L, Santos Botelho DM (2022) Coffee leaf rust in brazil: historical events, current situation, and control measures. Agronomy 12:496. https:\/\/doi.org\/10.3390\/agronomy12020496","DOI":"10.3390\/agronomy12020496"},{"key":"4465_CR84","doi-asserted-by":"publisher","unstructured":"Sharifi R, Ryu CM (2018) Revisiting bacterial volatile-mediated plant growth promotion: lessons from the past and objectives for the future. Ann Botany 122:349\u2013358. https:\/\/doi.org\/10.1093\/aob\/mcy108","DOI":"10.1093\/aob\/mcy108"},{"key":"4465_CR85","doi-asserted-by":"publisher","unstructured":"Shiomi HF, Silva HAS, Melo ISD, Nunes FV, Bettiol W (2006) Bioprospecting endophytic bacteria for biological control of coffee leaf rust. Scientia Agricola 63:32\u201339. https:\/\/doi.org\/10.1590\/S0103-90162006000100006","DOI":"10.1590\/S0103-90162006000100006"},{"key":"4465_CR86","doi-asserted-by":"publisher","unstructured":"Silva HSA, Tozzi JP, Terrasan CR, Bettiol W (2012) Endophytic microorganisms from coffee tissues as plant growth promoters and biocontrol agents of coffee leaf rust. Biol Control 63:62\u201367. https:\/\/doi.org\/10.1016\/j.biocontrol.2012.06.005","DOI":"10.1016\/j.biocontrol.2012.06.005"},{"key":"4465_CR87","doi-asserted-by":"crossref","unstructured":"Sindhu SS, Sehrawat A, Sharma R, Dahiya A (2016) Biopesticides: use of rhizosphere bacteria for biological control of plant pathogens. Def Life Sci J 1:135\u2013148","DOI":"10.14429\/dlsj.1.10747"},{"key":"4465_CR88","doi-asserted-by":"publisher","unstructured":"Singh BK, Trivedi P (2017) Microbiome and the future for food and nutrient security. Microb Biotechnol 10:50\u201353. https:\/\/doi.org\/10.1111\/1751-7915.12592","DOI":"10.1111\/1751-7915.12592"},{"key":"4465_CR89","unstructured":"Sirinunta A, Akarapisan A (2015) Screening of antagonistic bacteria for controlling Cercospora coffeicola in Arabica coffee. J Agricultural Technol 11:1209\u20131218"},{"key":"4465_CR90","doi-asserted-by":"publisher","unstructured":"Souza MPP, Cipriano MAP, Brahini MT, Sousa LP, Mondego JMC, Patricio FPA, Silveira APD (2025) Beneficial bacteria improve seedling growth and nutrition and promote biological control of coffee diseases. J Appl Microbiol 136:lxaf050. https:\/\/doi.org\/10.1093\/jambio\/lxaf050","DOI":"10.1093\/jambio\/lxaf050"},{"key":"4465_CR91","doi-asserted-by":"publisher","unstructured":"Strafella S, Simpson DJ, Yaghoubi Khanghani M, Angelis M, G\u00e4nzle M, Minervini F, Crecchio C (2020) Comparative genomics and in vitro plant growth promotion and biocontrol traits of lactic acid bacteria from the wheat rhizosphere. Microorganisms 9:78. https:\/\/doi.org\/10.3390\/microorganisms9010078","DOI":"10.3390\/microorganisms9010078"},{"key":"4465_CR92","doi-asserted-by":"publisher","unstructured":"Tahir HA, Gu Q, Wu H, Raza W, Hanif A, Wu L, Colman MV, Gao X (2017) Plant growth promotion by volatile organic compounds produced by Bacillus subtilis SYST2. Front Microbiol 8:171. https:\/\/doi.org\/10.3389\/fmicb.2017.00171","DOI":"10.3389\/fmicb.2017.00171"},{"key":"4465_CR93","doi-asserted-by":"publisher","unstructured":"Talhinhas P, Batista D, Diniz I, Vieira A, Silva DN, Loureiro A, Tavares S, Pereira AP, Azinheira HG, Guerra-Guimar\u00e3es L, V\u00e1rzea V, Silva MC (2017) The coffee leaf rust pathogen Hemileia vastatrix: one and a half centuries around the tropics. MolecularPlant Patholology 18:1039\u20131051. https:\/\/doi.org\/10.1111\/mpp.12512","DOI":"10.1111\/mpp.12512"},{"key":"4465_CR94","doi-asserted-by":"publisher","unstructured":"Tiwari S, Prasad V, Chauhan PS, Lata C (2017) Bacillus amyloliquefaciens confers tolerance to various abiotic stresses and modulates plant response to phytohormones through osmoprotection and gene expression regulation in rice. Front Plant Sci 8:1510. https:\/\/doi.org\/10.3389\/fpls.2017.01510","DOI":"10.3389\/fpls.2017.01510"},{"key":"4465_CR95","doi-asserted-by":"publisher","unstructured":"Trias R, Ba\u00f1eras L, Montesinos E, Badosa E (2008) Lactic acid bacteria from fresh fruit and vegetables as biocontrol agents of phytopathogenic bacteria and fungi. Int Microbiol 11:231\u2013236. https:\/\/doi.org\/10.2436\/20.1501.01.66","DOI":"10.2436\/20.1501.01.66"},{"key":"4465_CR96","doi-asserted-by":"publisher","unstructured":"Udayakumar S, Rasika DMD, Priyashantha H, Vidanarachchi JK, Ranadheera CS (2022) Probiotics and beneficial microorganisms in biopreservation of plant-based foods and beverages. Appl Sci 12:11737. https:\/\/doi.org\/10.3390\/app122211737","DOI":"10.3390\/app122211737"},{"key":"4465_CR97","doi-asserted-by":"publisher","unstructured":"Urgiles-G\u00f3mez N, Avila Salem ME, Loj\u00e1n P, Encalada M, Hurtado L, Araujo S, Collahuzado Y, Guachanam\u00e1 J, Poma N, Granda K, Robles A, Sen\u00e9s C, Cornejo P (2021) Plant growth-promoting microorganisms in coffee production: from isolation to field application. Agronomy 11:1531. https:\/\/doi.org\/10.3390\/agronomy11081531","DOI":"10.3390\/agronomy11081531"},{"key":"4465_CR98","doi-asserted-by":"publisher","unstructured":"van Lenteren JC, Bolckmans K, K\u00f6hl J, Ravensberg W, Urbaneja A (2018) Biological control using invertebrates and microorganisms: plenty of new opportunities. Biocontrol 63:39\u201359. https:\/\/doi.org\/10.1007\/s10526-017-9801-4","DOI":"10.1007\/s10526-017-9801-4"},{"key":"4465_CR99","doi-asserted-by":"publisher","unstructured":"Vasques NC, Nogueira MA, Hungria M (2024) Increasing application of multifunctional Bacillus for biocontrol of pests and diseases and plant growth promotion: lessons from Brazil. Agronomy 14:1654. https:\/\/doi.org\/10.3390\/agronomy14081654","DOI":"10.3390\/agronomy14081654"},{"key":"4465_CR100","doi-asserted-by":"publisher","unstructured":"Woo SL, Pepe O (2018) Microbial consortia: promising probiotics as plant biostimulants for sustainable agriculture. Front Plant Sci 9:1801. https:\/\/doi.org\/10.3389\/fpls.2018.01801","DOI":"10.3389\/fpls.2018.01801"},{"key":"4465_CR101","doi-asserted-by":"publisher","unstructured":"Zambolim L (2016) Current status and management of coffee leaf rust in Brazil. Trop Plant Pathol 41:1\u20138. https:\/\/doi.org\/10.1007\/s40858-016-0065-9","DOI":"10.1007\/s40858-016-0065-9"},{"key":"4465_CR102","doi-asserted-by":"publisher","unstructured":"Zhang N, Wang Z, Shao J, Xu Z, Liu Y, Xun W, Miao Y, Shen Q, Zhang R (2023) Biocontrol mechanisms of Bacillus: improving the efficiency of green agriculture. Microb Biotechnol 16:2250\u20132263. https:\/\/doi.org\/10.1111\/1751-7915.14348","DOI":"10.1111\/1751-7915.14348"},{"key":"4465_CR103","doi-asserted-by":"publisher","unstructured":"Zhou D, Huang XF, Chaparro JM, Bradi DV, Manter DK, Vivanco JM, Guo J (2016) Root and bacterial secretions regulate the interaction between plants and PGPR leading to distinct plant growth promotion effects. Plant Soil 401:259\u2013272. https:\/\/doi.org\/10.1007\/s11104-015-2743-7","DOI":"10.1007\/s11104-015-2743-7"},{"key":"4465_CR104","doi-asserted-by":"publisher","unstructured":"Zhou H, Jia S, Gao Y, Li X, Lin Y, Yang F, Ni K (2024) Characterization of phyllosphere endophytic lactic acid bacteria reveals a potential novel route to enhance silage fermentation quality. Commun Biology 7:117. https:\/\/doi.org\/10.1038\/s42003-024-05816-3","DOI":"10.1038\/s42003-024-05816-3"},{"key":"4465_CR105","doi-asserted-by":"publisher","unstructured":"Zoccoli DM, Takatsu A, Uesugi CH (2011) Ocorr\u00eancia de Mancha aureolada Em Cafeeiros Na Regi\u00e3o do tri\u00e2ngulo Mineiro e Alto Parana\u00edba. Bragantia 70:843\u2013849. https:\/\/doi.org\/10.1590\/S0006-87052011000400017","DOI":"10.1590\/S0006-87052011000400017"}],"container-title":["World Journal of Microbiology and Biotechnology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s11274-025-04465-w.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s11274-025-04465-w\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s11274-025-04465-w.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,7,28]],"date-time":"2025-07-28T03:28:46Z","timestamp":1753673326000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s11274-025-04465-w"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,7]]},"references-count":105,"journal-issue":{"issue":"7","published-print":{"date-parts":[[2025,7]]}},"alternative-id":["4465"],"URL":"https:\/\/doi.org\/10.1007\/s11274-025-04465-w","relation":{},"ISSN":["0959-3993","1573-0972"],"issn-type":[{"type":"print","value":"0959-3993"},{"type":"electronic","value":"1573-0972"}],"subject":[],"published":{"date-parts":[[2025,7]]},"assertion":[{"value":"28 February 2025","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"21 June 2025","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"11 July 2025","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"This article does not contain any studies with human participants or animals.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Ethical approval"}},{"value":"Not applicable.","order":3,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent to participate"}},{"value":"All authors declare their consent to publish this article.","order":4,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent for publication"}},{"value":"The authors declare no competing interests.","order":5,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}}],"article-number":"260"}}