{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,14]],"date-time":"2026-10-14T14:15:37Z","timestamp":1791987337609,"version":"4.4.0"},"reference-count":67,"publisher":"Springer Science and Business Media LLC","issue":"8","license":[{"start":{"date-parts":[[2026,7,27]],"date-time":"2026-07-27T00:00:00Z","timestamp":1785110400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2026,7,27]],"date-time":"2026-07-27T00:00:00Z","timestamp":1785110400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["World J Microbiol Biotechnol"],"DOI":"10.1007\/s11274-026-05161-z","type":"journal-article","created":{"date-parts":[[2026,7,27]],"date-time":"2026-07-27T11:00:44Z","timestamp":1785150044000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":1,"title":["Interaction of soil prokaryotic communities after nineteen years of conservation agriculture in rice-maize system"],"prefix":"10.1007","volume":"42","author":[{"ORCID":"https:\/\/orcid.org\/0009-0008-7788-8489","authenticated-orcid":false,"given":"Peram Nagaseshi","family":"Reddy","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sanjay","family":"Tiwari","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mukesh","family":"Kumar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"A. K.","family":"Singh","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0009-6230-8821","authenticated-orcid":false,"given":"Chinthala","family":"Mounika","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gurwaan","family":"Singh","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"R. K.","family":"Jat","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Illathur Rajesh","family":"Reddy","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"K. M.","family":"Choudhary","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"K. C.","family":"Kalwania","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"M. L.","family":"Jat","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8282-2953","authenticated-orcid":false,"given":"Mahesh K.","family":"Gathala","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2026,7,27]]},"reference":[{"key":"5161_CR1","first-page":"285","volume-title":"Methods in plant ecology","author":"SE Allen","year":"1986","unstructured":"Allen SE, Grimshaw HM, Rowland AP, Chapman PD (1986) Chemical analysis. In: Moore SB, Chapman PD (eds) Methods in plant ecology. Blackwell Scientific Publications, Oxford, pp 285\u2013344"},{"key":"5161_CR2","volume-title":"Official methods of analysis","author":"AOAC","year":"1995","unstructured":"AOAC (1995) Official methods of analysis, 16th edition. Association of Official Analytical Chemists, Washington, DC","edition":"16th edition"},{"key":"5161_CR3","doi-asserted-by":"publisher","first-page":"17","DOI":"10.1016\/j.soilbio.2018.11.002","volume":"129","author":"D Babin","year":"2019","unstructured":"Babin D, Deubel A, Jacquiod S, S\u00f8rensen SJ, Geistlinger J, Grosch R, Smalla K (2019) Impact of long-term agricultural management practices on soil prokaryotic communities. Soil Biol Biochem 129:17\u201328","journal-title":"Soil Biol Biochem"},{"issue":"5","key":"5161_CR4","doi-asserted-by":"publisher","first-page":"908","DOI":"10.1038\/ismej.2010.171","volume":"5","author":"ST Bates","year":"2011","unstructured":"Bates ST, Berg-Lyons D, Caporaso JG, Walters WA, Knight R, Fierer N (2011) Examining the global distribution of dominant archaeal populations in soil. ISME J 5(5):908\u2013917","journal-title":"ISME J"},{"key":"5161_CR5","doi-asserted-by":"publisher","first-page":"440","DOI":"10.1016\/j.tree.2016.02.016","volume":"31","author":"SF Bender","year":"2016","unstructured":"Bender SF, Wagg C, van der Heijden MGA (2016) An underground revolution: biodiversity and soil ecological engineering for agricultural sustainability. Trends Ecol Evol 31:440\u2013452","journal-title":"Trends Ecol Evol"},{"key":"5161_CR6","doi-asserted-by":"publisher","first-page":"1496","DOI":"10.1038\/s41396-018-0093-1","volume":"12","author":"RL Berendsen","year":"2018","unstructured":"Berendsen RL, Vismans G, Yu K, Song Y, de Jonge R, Burgman WP, Burm\u00f8lle M, Herschend J, Bakker PAHM, Pieterse CMJ (2018) Disease-induced assemblage of a plant-beneficial bacterial consortium. ISME J 12:1496\u20131507","journal-title":"ISME J"},{"key":"5161_CR8","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0256970","volume":"16","author":"L Cai","year":"2021","unstructured":"Cai L, Guo Z, Zhang J, Gai Z, Liu J, Meng Q, Liu X (2021) No tillage and residue mulching method on bacterial community diversity regulation in a black soil region of Northeastern China. PLoS One 16:e0256970. https:\/\/doi.org\/10.1371\/journal.pone.0256970","journal-title":"PLoS One"},{"key":"5161_CR9","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/j.still.2016.01.007","volume":"159","author":"Y Ch\u00e1vez-Romero","year":"2016","unstructured":"Ch\u00e1vez-Romero Y, Navarro-Noya YE, Reynoso-Mart\u00ednez SC, Sarria-Guzm\u00e1n Y, Govaerts B, Verhulst N, Dendooven L, Luna-Guido M (2016) 16S metagenomics reveals changes in the soil bacterial community driven by soil organic C, N-fertilizer and tillage-crop residue management. Soil Tillage Res 159:1\u20138","journal-title":"Soil Tillage Res"},{"key":"5161_CR10","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1007\/s13205-018-1317-9","volume":"8","author":"M Choudhary","year":"2018","unstructured":"Choudhary M, Sharma PC, Jat HS, Dash A, Rajashekar B, McDonald AJ, Jat ML (2018) Soil bacterial diversity under conservation agriculture-based cereal systems in Indo-Gangetic Plains. 3 Biotech 8:1\u201311","journal-title":"3 Biotech"},{"key":"5161_CR11","doi-asserted-by":"publisher","first-page":"1812","DOI":"10.3389\/fmicb.2020.01812","volume":"11","author":"M Choudhary","year":"2020","unstructured":"Choudhary M, Jat HS, Datta A, Sharma PC, Rajashekar B, Jat ML (2020) Topsoil bacterial community changes and nutrient dynamics under cereal based climate-smart agri-food systems. Front Microbiol 11:1812. https:\/\/doi.org\/10.3389\/fmicb.2020.01812","journal-title":"Front Microbiol"},{"key":"5161_CR12","doi-asserted-by":"publisher","first-page":"12","DOI":"10.1016\/j.agee.2016.03.017","volume":"224","author":"F Degrune","year":"2016","unstructured":"Degrune F, Theodorakopoulos N, Dufr\u00eane M, Colinet G, Bodson B, Hiel MP, Taminiau B, Nezer C, Daube G, Vandenbol M (2016) No favorable effect of reduced tillage on microbial community diversity in a silty loam soil (Belgium). Agric Ecosyst Environ 224:12\u201321. https:\/\/doi.org\/10.1016\/j.agee.2016.03.017","journal-title":"Agric Ecosyst Environ"},{"key":"5161_CR73","doi-asserted-by":"crossref","unstructured":"Ramirez-Villanueva, D.A., Bello-L\u00f3pez, J.M., Navarro-Noya, Y.E., Luna-Guido, M., Verhulst, N., Govaerts, B., Dendooven, L. 2015. Bacterial community structure in maize residue amended soil with contrasting management practices. Applied Soil Ecology, 90, 49\u201359.","DOI":"10.1016\/j.apsoil.2015.01.010"},{"key":"5161_CR13","doi-asserted-by":"publisher","first-page":"35","DOI":"10.1016\/j.ejsobi.2017.03.001","volume":"80","author":"W Dong","year":"2017","unstructured":"Dong W, Liu E, Yan C, Tian J, Zhang H, Zhang Y (2017) Impact of no tillage vs. conventional tillage on the soil bacterial community structure in a winter wheat cropping succession in northern China. Eur J Soil Biol 80:35\u201342. https:\/\/doi.org\/10.1016\/j.ejsobi.2017.03.001","journal-title":"Eur J Soil Biol"},{"key":"5161_CR14","doi-asserted-by":"publisher","first-page":"685","DOI":"10.1038\/s41587-020-0548-6","volume":"38","author":"GM Douglas","year":"2020","unstructured":"Douglas GM, Maffei VJ, Zaneveld JR, Yurgel SN, Brown JR, Taylor CM, Huttenhower C, Langille MG (2020) PICRUSt2 for prediction of metagenome functions. Nat Biotechnol 38:685\u2013688","journal-title":"Nat Biotechnol"},{"key":"5161_CR15","doi-asserted-by":"publisher","first-page":"3047","DOI":"10.1093\/bioinformatics\/btw354","volume":"32","author":"P Ewels","year":"2016","unstructured":"Ewels P, Magnusson M, Lundin S, K\u00e4ller M (2016) MultiQC: summarize analysis results for multiple tools and samples in a single report. Bioinformatics 32:3047\u20133048","journal-title":"Bioinformatics"},{"key":"5161_CR16","volume-title":"Status of the world\u2019s soil resources (SWSR) - main report","author":"FAO, ITPS","year":"2015","unstructured":"FAO, ITPS (2015) Status of the world\u2019s soil resources (SWSR) - main report. Food and Agriculture Organization, Rome"},{"key":"5161_CR72","doi-asserted-by":"publisher","unstructured":"Francioli D, Schulz E, Lentendu G, Wubet T, Buscot F, Reitz T (2016) Mineral vs. organic amendments: microbial community structure, activity and abundance of agriculturally relevant microbes are driven by long-term fertilization strategies. Front Microbiol 7:1446 https:\/\/doi.org\/10.3389\/fmicb.2016.01446","DOI":"10.3389\/fmicb.2016.01446"},{"key":"5161_CR17","doi-asserted-by":"publisher","first-page":"85","DOI":"10.1016\/j.agee.2013.06.002","volume":"177","author":"M Gathala","year":"2013","unstructured":"Gathala M, Kumar V, Sharma PC, Saharawat Y, Jat HS, Singh M, Kumar A, Jat ML, Humphreys E, Sharma DK, Sharma S, Ladha JK (2013) Optimizing intensive cereal-based cropping systems addressing current and future drivers of agricultural change in the northwestern Indo-Gangetic Plains of India. Agric Ecosyst Environ 177:85\u201397. https:\/\/doi.org\/10.1016\/j.agee.2013.06.002","journal-title":"Agric Ecosyst Environ"},{"key":"5161_CR18","doi-asserted-by":"publisher","first-page":"85","DOI":"10.1016\/j.fcr.2014.12.003","volume":"172","author":"MK Gathala","year":"2015","unstructured":"Gathala MK, Timsina J, Islam MS, Rahman MM, Hossain MI, Harun-Ar-Rashid M, Ghosh AK, Krupnik TJ, Tiwari TP, McDonald A (2015) Conservation agriculture-based tillage and crop establishment options can maintain farmers\u2019 yields and increase profits in South Asia\u2019s rice-maize systems: Evidence from Bangladesh. Field Crops Res 172:85\u201398. https:\/\/doi.org\/10.1016\/j.fcr.2014.12.003","journal-title":"Field Crops Res"},{"key":"5161_CR19","doi-asserted-by":"publisher","DOI":"10.1016\/j.rser.2019.109645","volume":"120","author":"MK Gathala","year":"2020","unstructured":"Gathala MK, Laing AM, Tiwari TP, Timsina J, Islam MS, Chowdhury AK, Chattopadhyay C, Singh AK, Bhatt BP, Shrestha R, Barma NC (2020) Enabling smallholder farmers to sustainably improve their food, energy and water nexus while achieving environmental and economic benefits. Renew Sustain Energy Rev 120:109645","journal-title":"Renew Sustain Energy Rev"},{"key":"5161_CR21","doi-asserted-by":"publisher","first-page":"251","DOI":"10.3390\/w14020251","volume":"14","author":"S Ghosh Roy","year":"2022","unstructured":"Ghosh Roy S, Wimpee CF, McGuire SA, Ehlinger TJ (2022) Responses of bacterial taxonomical diversity indicators to pollutant loadings in experimental wetland microcosms. Water 14:251","journal-title":"Water"},{"key":"5161_CR22","volume-title":"Agriculture Handbook No. 379","author":"HK Goering","year":"1970","unstructured":"Goering HK, Van Soest PJ (1970) Forage fiber analysis (apparatus, reagents, procedures and some applications). Agriculture Handbook No. 379. United States Department of Agriculture, Agricultural Research Service, Washington, DC, pp 1\u201320"},{"key":"5161_CR24","doi-asserted-by":"publisher","DOI":"10.1016\/j.fcr.2024.109476","volume":"315","author":"MK Gora","year":"2024","unstructured":"Gora MK, Jat HS, Ladha JK, Choudhary M, Sharma PC, Yadav AK, Singh LK, Sapkota TB, Singh Y, Prajapat K, Yadav RK (2024) Enhancing productivity, soil health, and reducing global warming potential through diverse conservation agriculture cropping systems in India\u2019s Western Indo-Gangetic Plains. Field Crops Res 315:109476","journal-title":"Field Crops Res"},{"key":"5161_CR25","doi-asserted-by":"publisher","DOI":"10.1038\/srep33155","volume":"6","author":"L Guo","year":"2016","unstructured":"Guo L, Zheng S, Cao C, Li C (2016) Tillage practices and straw-returning methods affect topsoil bacterial community and organic C under a rice-wheat cropping system in central China. Sci Rep 6:33155. https:\/\/doi.org\/10.1038\/srep33155","journal-title":"Sci Rep"},{"key":"5161_CR26","first-page":"1","volume":"57","author":"JJ Hanway","year":"1952","unstructured":"Hanway JJ, Heidel H (1952) Soil analysis methods as used in Iowa State College soil testing laboratory. Iowa State Coll Agric Bull 57:1\u201331","journal-title":"Iowa State Coll Agric Bull"},{"key":"5161_CR27","doi-asserted-by":"publisher","first-page":"1177","DOI":"10.1038\/ismej.2014.210","volume":"9","author":"M Hartmann","year":"2015","unstructured":"Hartmann M, Frey B, Mayer J, M\u00e4der P, Widmer F (2015) Distinct soil microbial diversity under long-term organic and conventional farming. ISME J 9:1177\u20131194","journal-title":"ISME J"},{"key":"5161_CR28","doi-asserted-by":"publisher","first-page":"86","DOI":"10.1080\/01490451.2019.1666193","volume":"37","author":"H He","year":"2020","unstructured":"He H, Li M, Zhen Y, Mi T, Yu Z (2020) Bacterial and archaeal communities in sediments from the adjacent waters of Rushan Bay (China) revealed by Illumina sequencing. Geomicrobiol J 37:86\u2013100","journal-title":"Geomicrobiol J"},{"key":"5161_CR29","doi-asserted-by":"publisher","first-page":"458","DOI":"10.1007\/s00203-022-03060-z","volume":"204","author":"M Hern\u00e1ndez-Guzm\u00e1n","year":"2022","unstructured":"Hern\u00e1ndez-Guzm\u00e1n M, P\u00e9rez-Hern\u00e1ndez V, G\u00f3mez-Acata S, Jim\u00e9nez-Bueno N, Verhulst N, Mu\u00f1oz-Arenas LC, Navarro-Noya YE, Luna-Guido ML, Dendooven L (2022) Application of young maize plant residues alters the microbiome composition and its functioning in a soil under conservation agriculture: a metagenomics study. Arch Microbiol 204:458","journal-title":"Arch Microbiol"},{"key":"5161_CR30","doi-asserted-by":"publisher","unstructured":"Hisham MM, Chandran J, Gopinath PP (2025) RAISINS: Integrating R and AI for agricultural data analysis. Journal of sustainable technology in agriculture, 1. (1):1\u201311. https:\/\/doi.org\/10.5281\/zenodo.15622128","DOI":"10.5281\/zenodo.15622128"},{"key":"5161_CR31","first-page":"498","volume-title":"Soil chemical analysis","author":"ML Jackson","year":"1973","unstructured":"Jackson ML (1973) Soil chemical analysis. Prentice Hall of India, New Delhi, pp 498\u2013512"},{"key":"5161_CR32","doi-asserted-by":"publisher","first-page":"199","DOI":"10.1016\/j.fcr.2014.04.015","volume":"164","author":"RK Jat","year":"2014","unstructured":"Jat RK, Sapkota TB, Singh RG, Jat ML, Kumar M, Gupta RK (2014) Seven years of conservation agriculture in a rice\u2013wheat rotation of eastern Gangetic Plains of South Asia: yield trends and economic profitability. Field Crops Res 164:199\u2013210. https:\/\/doi.org\/10.1016\/j.fcr.2014.04.015","journal-title":"Field Crops Res"},{"key":"5161_CR33","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/j.fcr.2018.12.004","volume":"232","author":"RK Jat","year":"2019","unstructured":"Jat RK, Singh RG, Kumar M, Jat ML, Parihar CM, Bijarniya D, Sutaliya JM, Jat MK, Parihar MD, Kakraliya SK, Gupta RK (2019) Ten years of conservation agriculture in a rice\u2013maize rotation of Eastern Gangetic Plains of India: Yield trends, water productivity and economic profitability. Field Crops Res 232:1\u201310","journal-title":"Field Crops Res"},{"key":"5161_CR34","doi-asserted-by":"publisher","DOI":"10.1016\/j.jenvman.2024.123448","volume":"373","author":"HS Jat","year":"2025","unstructured":"Jat HS, Khokhar S, Prajapat K, Choudhary M, Kakraliya M, Gora MK, Gathala MK, Sharma PC, Mcdonald A, Ladha JK, Jat ML (2025) A decade of conservation agriculture in intensive cereal systems: transitioning to soil resilience and stable yield trends in a climate crisis. J Environ Manage 373:123448","journal-title":"J Environ Manage"},{"key":"5161_CR35","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-017-01406-6","volume":"8","author":"M Keiluweit","year":"2017","unstructured":"Keiluweit M, Wanzek T, Kleber M, Nico P, Fendorf S (2017) Anaerobic microsites have an unaccounted role in soil carbon stabilization. Nat Commun 8:1771","journal-title":"Nat Commun"},{"key":"5161_CR36","first-page":"109","volume":"632","author":"CG Knight","year":"2024","unstructured":"Knight CG, Nicolitch O, Griffiths RI, Goodall T, Jones B, Weser C, Langridge H, Davison J, Dellavalle A, Eisenhauer N, Gongalsky KB (2024) Soil microbiomes show consistent and predictable responses to extreme events. Nature 632:109\u2013116","journal-title":"Nature"},{"key":"5161_CR37","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2023.1181317","volume":"14","author":"R Kumar","year":"2023","unstructured":"Kumar R, Choudhary JS, Naik SK, Mondal S, Mishra JS, Poonia SP, Kumar S, Hans H, Kumar S, Das A, Kumar V, Bhatt BP, Chaudhari SK, Malik RK, Craufurd P, McDonald A, Sherpa SR (2023) Influence of conservation agriculture-based production systems on bacterial diversity and soil quality in rice-wheat-greengram cropping system in eastern Indo-Gangetic Plains of India. Front Microbiol 14:1181317. https:\/\/doi.org\/10.3389\/fmicb.2023.1181317","journal-title":"Front Microbiol"},{"key":"5161_CR38","doi-asserted-by":"publisher","first-page":"50","DOI":"10.4324\/9781032684369-10","volume-title":"Regenerative Farming and Sustainable Diets","author":"R Lal","year":"2024","unstructured":"Lal R (2024) 7 Regenerative management of agroecosystem soils to minimise extinction risks and for climate and food security. Regenerative Farming and Sustainable Diets. p 50"},{"key":"5161_CR39","doi-asserted-by":"publisher","first-page":"421","DOI":"10.2136\/sssaj1978.03615995004200030009x","volume":"42","author":"WL Lindsay","year":"1978","unstructured":"Lindsay WL, Norvell WA (1978) Development of DTPA soil test for zinc, iron, manganese and copper. Soil Sci Soc Am J 42:421\u2013428. https:\/\/doi.org\/10.2136\/sssaj1978.03615995004200030009x","journal-title":"Soil Sci Soc Am J"},{"key":"5161_CR40","doi-asserted-by":"publisher","DOI":"10.3390\/microorganisms8060836","volume":"8","author":"C Liu","year":"2020","unstructured":"Liu C, Li L, Xie J, Coulter JA, Zhang R, Luo Z, Cai L, Gopalakrishnan S (2020) Soil bacterial diversity and potential functions are regulated by long-term conservation tillage and straw mulching. Microorganisms 8:836. https:\/\/doi.org\/10.3390\/microorganisms8060836","journal-title":"Microorganisms"},{"key":"5161_CR41","doi-asserted-by":"publisher","DOI":"10.1016\/j.apsoil.2023.104850","volume":"188","author":"X Liu","year":"2023","unstructured":"Liu X, Shi Z, Bai H, Zhang J, Sun D, Chen Y (2023) Soil carbon sequestration in paddy field and its simultaneous mineralization to supply available nutrients for the crops are affected by no-tillage with straw management: a meta-analysis. Appl Soil Ecol 188:104850. https:\/\/doi.org\/10.1016\/j.apsoil.2023.104850","journal-title":"Appl Soil Ecol"},{"key":"5161_CR42","doi-asserted-by":"publisher","first-page":"693","DOI":"10.1016\/j.rser.2017.08.057","volume":"81","author":"SK Lohan","year":"2018","unstructured":"Lohan SK, Jat HS, Yadav AK, Sidhu HS, Jat ML, Choudhary M, Peter JK, Sharma PC (2018) Burning issues of paddy residue management in north-west states of India. Renew Sustain Energy Rev 81:693\u2013706","journal-title":"Renew Sustain Energy Rev"},{"key":"5161_CR43","doi-asserted-by":"publisher","DOI":"10.1016\/j.still.2022.105527","volume":"225","author":"L Lv","year":"2023","unstructured":"Lv L, Gao Z, Liao K, Zhu Q, Zhu J (2023) Impact of conservation tillage on the distribution of soil nutrients with depth. Soil Tillage Res 225:105527. https:\/\/doi.org\/10.1016\/j.still.2022.105527","journal-title":"Soil Tillage Res"},{"key":"5161_CR44","doi-asserted-by":"publisher","first-page":"403","DOI":"10.1016\/j.crvi.2010.12.003","volume":"334","author":"PA Maron","year":"2011","unstructured":"Maron PA, Mougel C, Ranjard L (2011) Soil microbial diversity: methodological strategy, spatial overview and functional interest. CR Biol 334:403\u2013411","journal-title":"CR Biol"},{"key":"5161_CR45","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.02738-17","volume":"84","author":"PA Maron","year":"2018","unstructured":"Maron PA, Sarr A, Kaisermann A, L\u00e9v\u00eaque J, Mathieu O, Guigue J, Ranjard L (2018) High microbial diversity promotes soil ecosystem functioning. Appl Environ Microbiol 84:e02738\u2013e2817","journal-title":"Appl Environ Microbiol"},{"key":"5161_CR46","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2024.1444903","volume":"15","author":"AK Mishra","year":"2025","unstructured":"Mishra AK, Yadav P, Sharma S, Maurya P (2025) Comparison of microbial diversity and community structure in soils managed with organic and chemical fertilization strategies using amplicon sequencing of 16S and ITS regions. Front Microbiol 15:1444903. https:\/\/doi.org\/10.3389\/fmicb.2024.1444903","journal-title":"Front Microbiol"},{"key":"5161_CR47","doi-asserted-by":"publisher","first-page":"185","DOI":"10.1111\/1758-2229.12822","volume":"12","author":"LC Mu\u00f1oz-Arenas","year":"2020","unstructured":"Mu\u00f1oz-Arenas LC, Fusaro C, Hern\u00e1ndez-Guzm\u00e1n M, Dendooven L, Estrada-Torres A, Navarro-Noya YE (2020) Soil microbial diversity drops with land-use change in a high mountain temperate forest: a metagenomics survey. Environ Microbiol Rep 12:185\u2013194","journal-title":"Environ Microbiol Rep"},{"key":"5161_CR48","doi-asserted-by":"publisher","first-page":"86","DOI":"10.1016\/j.soilbio.2013.05.009","volume":"65","author":"YE Navarro-Noya","year":"2013","unstructured":"Navarro-Noya YE, G\u00f3mez-Acata S, Montoya-Ciriaco N, Rojas-Valdez A, Su\u00e1rez-Arriaga MC, Valenzuela-Encinas C, Jim\u00e9nez-Bueno N, Verhulst N, Govaerts B, Dendooven L (2013) Relative impacts of tillage, residue management and crop-rotation on soil bacterial communities in a semi-arid agroecosystem. Soil Biol Biochem 65:86\u201395","journal-title":"Soil Biol Biochem"},{"key":"5161_CR50","doi-asserted-by":"publisher","first-page":"424","DOI":"10.3390\/genes10060424","volume":"10","author":"J Nelkner","year":"2019","unstructured":"Nelkner J, Henke C, Lin TW, P\u00e4tzold W, Hassa J, Jaenicke S, Grosch R, Smalla K (2019) Effect of long-term farming practices on agricultural soil microbiome members represented by metagenomically assembled genomes (MAGs) and their predicted plant-beneficial genes. Genes 10:424","journal-title":"Genes"},{"key":"5161_CR51","volume-title":"Estimation of available phosphorous in soil by extraction with sodium bicarbonate. USDA Circular No. 939","author":"SR Olsen","year":"1954","unstructured":"Olsen SR, Cole CV, Watanabe FS, Dean LA (1954) Estimation of available phosphorous in soil by extraction with sodium bicarbonate. USDA Circular No. 939. United States Department of Agriculture, Washington, DC"},{"key":"5161_CR52","doi-asserted-by":"publisher","DOI":"10.1016\/j.scitotenv.2025.179963","volume":"994","author":"A Parambil-Peedika","year":"2025","unstructured":"Parambil-Peedika A, Laing A, Gathala MK, Cariappa AA, Krishna VV (2025) Agroecological impacts of crop residue burning: a qualitative systematic review of direct and inferred evidence. Sci Total Environ 994:179963","journal-title":"Sci Total Environ"},{"key":"5161_CR53","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2023.1102682","volume":"14","author":"G Pratibha","year":"2023","unstructured":"Pratibha G, Manjunath M, Raju BMK, Srinivas I, Rao KV, Shanker AK, Prasad JVNS, Rao MS, Kundu S, Indoria AK, Kumar U, Rao KS, Anna S, Rao CS, Singh VK, Biswas AK, Chaudhari SK (2023) Soil bacterial community structure and functioning in a long-term conservation agriculture experiment under semi-arid rainfed production system. Front Microbiol 14:1102682. https:\/\/doi.org\/10.3389\/fmicb.2023.1102682","journal-title":"Front Microbiol"},{"key":"5161_CR54","doi-asserted-by":"publisher","first-page":"833","DOI":"10.1038\/nbt.3935","volume":"35","author":"C Quince","year":"2017","unstructured":"Quince C, Walker AW, Simpson JT, Loman NJ, Segata N (2017) Shotgun metagenomics, from sampling to analysis. Nat Biotechnol 35:833\u2013844. https:\/\/doi.org\/10.1038\/nbt.3935","journal-title":"Nat Biotechnol"},{"key":"5161_CR56","doi-asserted-by":"publisher","first-page":"967","DOI":"10.1016\/j.bbrc.2015.12.083","volume":"469","author":"R Ranjan","year":"2016","unstructured":"Ranjan R, Rani A, Metwally A, McGee HS, Perkins DL (2016) Analysis of the microbiome: advantages of whole genome shotgun versus 16S amplicon sequencing. Biochem Biophys Res Commun 469:967\u2013977. https:\/\/doi.org\/10.1016\/j.bbrc.2015.12.083","journal-title":"Biochem Biophys Res Commun"},{"key":"5161_CR57","doi-asserted-by":"publisher","DOI":"10.1128\/mSphere.00300-17","volume":"2","author":"E Ransom-Jones","year":"2017","unstructured":"Ransom-Jones E, McCarthy AJ, Haldenby S, Doonan J, McDonald JE (2017) Lignocellulose-degrading microbial communities in landfill sites represent a repository of unexplored biomass-degrading diversity. mSphere 2:e00300\u201317","journal-title":"mSphere"},{"key":"5161_CR58","doi-asserted-by":"publisher","first-page":"283","DOI":"10.1038\/ismej.2007.53","volume":"1","author":"LF Roesch","year":"2007","unstructured":"Roesch LF, Fulthorpe RR, Riva A, Casella G, Hadwin AKM, Kent AD, Daroub SH, Camargo FAO, Farmerie WG, Triplett EW (2007) Pyrosequencing enumerates and contrasts soil microbial diversity. ISME J 1:283\u2013290. https:\/\/doi.org\/10.1038\/ismej.2007.53","journal-title":"ISME J"},{"key":"5161_CR59","doi-asserted-by":"publisher","first-page":"157","DOI":"10.3390\/microbiolres12010012","volume":"12","author":"GS Shanmugam","year":"2021","unstructured":"Shanmugam GS, Buehring NW, Prevost JD, Kingery WL (2021) Soil bacterial community diversity and composition as affected by tillage intensity treatments in corn-soybean production systems. Microbiol Res 12:157\u2013172. https:\/\/doi.org\/10.3390\/microbiolres12010012","journal-title":"Microbiol Res"},{"key":"5161_CR61","doi-asserted-by":"publisher","first-page":"8075","DOI":"10.1002\/ece3.2553","volume":"6","author":"CR Smith","year":"2016","unstructured":"Smith CR, Blair PL, Boyd C, Cody B, Hazel A, Hedrick A, Kathuria H, Khurana P, Kramer B, Muterspaw K, Peck C (2016) Microbial community responses to soil tillage and crop rotation in a corn\/soybean agroecosystem. Ecol Evol 6:8075\u20138084","journal-title":"Ecol Evol"},{"key":"5161_CR62","doi-asserted-by":"publisher","first-page":"106","DOI":"10.1016\/j.apsoil.2014.10.010","volume":"86","author":"RC Souza","year":"2015","unstructured":"Souza RC, Hungria M, Cant\u00e3o ME, Vasconcelos ATR, Nogueira MA, Vicente VA (2015) Metagenomic analysis reveals microbial functional redundancies and specificities in a soil under different tillage and crop-management regimes. Appl Soil Ecol 86:106\u2013112","journal-title":"Appl Soil Ecol"},{"key":"5161_CR63","first-page":"259","volume":"25","author":"BV Subbiah","year":"1956","unstructured":"Subbiah BV, Asija GL (1956) A rapid procedure for determination of available nitrogen in soils. Curr Sci 25:259\u2013260","journal-title":"Curr Sci"},{"key":"5161_CR64","doi-asserted-by":"publisher","first-page":"33","DOI":"10.1016\/j.soilbio.2013.05.007","volume":"65","author":"WJ Sul","year":"2013","unstructured":"Sul WJ, Asuming-Brempong S, Wang Q, Tourlousse DM, Penton CR, Deng Y, Rodrigues JL, Adiku SG, Jones JW, Zhou J, Cole JR (2013) Tropical agricultural land management influences on soil microbial communities through its effect on soil organic carbon. Soil Biol Biochem 65:33\u201338","journal-title":"Soil Biol Biochem"},{"key":"5161_CR65","doi-asserted-by":"publisher","DOI":"10.3390\/agronomy13030790","volume":"13","author":"Q Sun","year":"2023","unstructured":"Sun Q, Zhang P, Liu X, Zhang H, Liu S, Sun X, Jiang W (2023) Long-term tillage alters soil properties and rhizosphere bacterial community in lime concretion black soil under winter wheat\u2013summer maize double-cropping system. Agronomy 13:790. https:\/\/doi.org\/10.3390\/agronomy13030790","journal-title":"Agronomy"},{"key":"5161_CR66","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-024-53169-6","volume":"15","author":"J Teng","year":"2024","unstructured":"Teng J, Hou R, Dungait JA, Zhou G, Kuzyakov Y, Zhang J, Tian J, Cui Z, Zhang F, Delgado-Baquerizo M (2024) Conservation agriculture improves soil health and sustains crop yields after long-term warming. Nat Commun 15:8785. https:\/\/doi.org\/10.1038\/s41467-024-53169-6","journal-title":"Nat Commun"},{"key":"5161_CR67","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1007\/s11274-025-04312-y","volume":"41","author":"SS Thakur","year":"2025","unstructured":"Thakur SS, Gonz\u00e1lez SS, Suravajhala P, Jain SK, Yadav S, Narayan KS, Esack E, Kuzyakov Y, Ratnasari A (2025) Metagenomic insights of microbial functions under conventional and conservation agriculture. World J Microbiol Biotechnol 41:1\u201318","journal-title":"World J Microbiol Biotechnol"},{"key":"5161_CR68","doi-asserted-by":"publisher","first-page":"973","DOI":"10.1111\/gcb.12752","volume":"21","author":"MA Tsiafouli","year":"2015","unstructured":"Tsiafouli MA, Th\u00e9bault E, Sgardelis SP, de Ruiter PC, van der Putten WH, Birkhofer K, Hemerik L, de Vries FT, Bardgett RD, Brady MV, Bj\u00f8rnlund L, J\u00f8rgensen HB, Christensen S, D\u2019Hertefeldt T, Hotes S, Hol WHG, Frouz J, Liiri M, Mortimer SR, Set\u00e4l\u00e4 H, Tzanopoulos J, Uteseny K, P\u00ed\u017el V, Star\u00fd J, Wolters V, Hedlund K (2015) Intensive agriculture reduces soil biodiversity across Europe. Glob Change Biol 21:973\u2013985","journal-title":"Glob Change Biol"},{"key":"5161_CR69","doi-asserted-by":"publisher","DOI":"10.1016\/j.still.2022.105508","volume":"224","author":"TS Wacker","year":"2022","unstructured":"Wacker TS, Jensen LS, Thorup-Kristensen K (2022) Conservation agriculture affects soil organic matter distribution, microbial metabolic capacity and nitrogen turnover under Danish field conditions. Soil Tillage Res 224:105508. https:\/\/doi.org\/10.1016\/j.still.2022.105508","journal-title":"Soil Tillage Res"},{"key":"5161_CR70","doi-asserted-by":"publisher","first-page":"29","DOI":"10.1097\/00010694-193401000-00003","volume":"37","author":"A Walkley","year":"1934","unstructured":"Walkley A, Black CA (1934) Estimation of organic carbon by chromic acid titration method. Soil Sci 37:29\u201338","journal-title":"Soil Sci"},{"key":"5161_CR71","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2022.1051721","volume":"13","author":"X Zhang","year":"2022","unstructured":"Zhang X, Huang Z, Zhong Z, Li Q, Bian F, Yang C (2022) Metagenomic insights into the characteristics of soil microbial communities in the decomposing biomass of Moso bamboo forests under different management practices. Front Microbiol 13:1051721. https:\/\/doi.org\/10.3389\/fmicb.2022.1051721","journal-title":"Front Microbiol"}],"container-title":["World Journal of Microbiology and Biotechnology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s11274-026-05161-z.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s11274-026-05161-z","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s11274-026-05161-z.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,8,26]],"date-time":"2026-08-26T10:09:44Z","timestamp":1787738984000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s11274-026-05161-z"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,7,27]]},"references-count":67,"journal-issue":{"issue":"8","published-online":{"date-parts":[[2026,8]]}},"alternative-id":["5161"],"URL":"https:\/\/doi.org\/10.1007\/s11274-026-05161-z","relation":{},"ISSN":["1573-0972"],"issn-type":[{"value":"1573-0972","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,7,27]]},"assertion":[{"value":"2 April 2026","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"21 July 2026","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"27 July 2026","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"As no human or mammalian subjects were involved in this research, no ethics approvals were required for this study.","order":1,"name":"Ethics","label":"<b>Ethics approval<\/b>","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"All authors consent to participate in the publication of these data.","order":2,"name":"Ethics","label":"<b>Informed consent<\/b>","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"All authors consent to publish this work.","order":3,"name":"Ethics","label":"<b>Consent for publication<\/b>","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"The authors declare no competing interests.","order":4,"name":"Ethics","label":"Competing interests","group":{"name":"EthicsHeading","label":"Declarations"}}],"article-number":"433"}}