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The novelty of this work was to investigate the antifungal and plant growth-promoting capabilities of some plant growth-promoting fungi (PGPF). Plant growth-promoting fungi (PGPF) improved the plant health and control plant infections. In this study, two fungal strains as PGPF were isolated and identified as <jats:italic>Aspergillus fumigatus<\/jats:italic> and <jats:italic>Rhizopus oryzae<\/jats:italic> using molecular method. The extracts of <jats:italic>A. fumigatus<\/jats:italic> and <jats:italic>R. oryzae<\/jats:italic> exhibited promising antifungal activity against <jats:italic>F. oxysporum<\/jats:italic> in vitro<jats:italic>.<\/jats:italic> Moreover, antagonistic effect of <jats:italic>A. fumigatus<\/jats:italic> and <jats:italic>R. oryzae<\/jats:italic> against <jats:italic>F. oxysporum<\/jats:italic> causing tomato wilt disease was evaluated in vivo. Disease severity and growth markers were recorded and in vitro antagonistic activity assay of the isolated <jats:italic>A. fumigatus<\/jats:italic> and <jats:italic>R. oryzae<\/jats:italic> against <jats:italic>Fusarium oxysporum<\/jats:italic> was measured. Physiological markers of defense in plant as response to stimulate systemic resistance (SR) were recorded. Our results indicated that <jats:italic>A. fumigatus<\/jats:italic> and <jats:italic>R. oryzae<\/jats:italic> decreased the percentage of disease severity by 12.5 and 37.5%, respectively. In addition, they exhibited relatively high protection percentage of 86.35 and 59.06% respectively. <jats:italic>Fusarium<\/jats:italic> wilt was declined the growth parameters, photosynthetic pigments, total soluble carbohydrate, and total soluble protein, whereas content of free proline, total phenols, and the activity of antioxidant enzymes activity increased under infection. Moreover, application of <jats:italic>A. fumigatus<\/jats:italic> and <jats:italic>R. oryzae<\/jats:italic> on infected plants successfully recovered the loss of morphological traits, photosynthetic pigment total carbohydrates, and total soluble proteins in comparison to infected control plants. PGPF strains in both non-infected and infected plants showed several responses in number and density of peroxidase (POD) and polyphenol oxidase (PPO) isozymes.<\/jats:p>","DOI":"10.1007\/s12010-022-03975-9","type":"journal-article","created":{"date-parts":[[2022,6,11]],"date-time":"2022-06-11T07:02:37Z","timestamp":1654930957000},"page":"5100-5118","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":65,"title":["Antagonistic Effect of Plant Growth-Promoting Fungi Against Fusarium Wilt Disease in Tomato: In vitro and In vivo Study"],"prefix":"10.1007","volume":"194","author":[{"given":"Mohamed S.","family":"Attia","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Deiaa A.","family":"El-Wakil","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0024-3606","authenticated-orcid":false,"given":"Amr H.","family":"Hashem","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Amer M.","family":"Abdelaziz","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2022,6,11]]},"reference":[{"issue":"1","key":"3975_CR1","doi-asserted-by":"crossref","first-page":"47","DOI":"10.3788\/AOS20103001.0047","volume":"37","author":"L Wang","year":"2010","unstructured":"Wang, L., et al. 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