{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,19]],"date-time":"2026-08-19T14:10:05Z","timestamp":1787148605929,"version":"build-2736575974"},"reference-count":51,"publisher":"Springer Science and Business Media LLC","issue":"12","license":[{"start":{"date-parts":[[2024,12,6]],"date-time":"2024-12-06T00:00:00Z","timestamp":1733443200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2024,12,6]],"date-time":"2024-12-06T00:00:00Z","timestamp":1733443200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Mol Biotechnol"],"published-print":{"date-parts":[[2025,12]]},"DOI":"10.1007\/s12033-024-01326-z","type":"journal-article","created":{"date-parts":[[2024,12,6]],"date-time":"2024-12-06T13:50:23Z","timestamp":1733493023000},"page":"4449-4464","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":5,"title":["Identification of Novel Drug Molecules Against NS3-Like Helicase Enzyme of Alongshan Virus"],"prefix":"10.1007","volume":"67","author":[{"given":"Fizza","family":"Gul","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0754-1742","authenticated-orcid":false,"given":"Sajjad","family":"Ahmad","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Kalsoom","family":"Khan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Rehana","family":"Masood","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Farhan","family":"Siddique","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mehvish","family":"Bibi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Salma Mohammed","family":"Aljahdali","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mohammad Abdullah","family":"Aljasir","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tabarak Sabah","family":"Jassim","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dong-Qing","family":"Wei","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Muhammad","family":"Irfan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2024,12,6]]},"reference":[{"issue":"6","key":"1326_CR1","first-page":"2119","volume":"30","author":"MT ul Qamar","year":"2017","unstructured":"ul Qamar, M. T., Ashfaq, U. A., Tusleem, K., Mumtaz, A., Tariq, Q., Goheer, A., & Ahmed, B. (2017). In-silico identification and evaluation of plant flavonoids as dengue NS2B\/NS3 protease inhibitors using molecular docking and simulation approach. Pakistan Journal of Pharmaceutical Sciences, 30(6), 2119\u20132138.","journal-title":"Pakistan Journal of Pharmaceutical Sciences"},{"key":"1326_CR2","doi-asserted-by":"publisher","unstructured":"Paraskevopoulou, S., K\u00e4fer, S., Zirkel, F., Donath, A., Petersen, M., Liu, S., Zin, X., Drosten, C., Misof, B., Junglen, S. (2021). Viromics of extant insect orders unveil the evolution of the flavi-like superfamily. Virus Evolution, 7(1), 1\u201316. https:\/\/doi.org\/10.1093\/ve\/veab030","DOI":"10.1093\/ve\/veab030"},{"key":"1326_CR3","doi-asserted-by":"publisher","unstructured":"Wang, Z. D., Wang, W., Wang, N. N., Qiu, K., Zhang, X., Tana, G., Liu, Q., Zhu, X. Q. (2019). Prevalence of the emerging novel Alongshan virus infection in sheep and cattle in Inner Mongolia, northeastern China. Parasites and Vectors, 12(1), 1\u20137. https:\/\/doi.org\/10.1186\/s13071-019-3707-1","DOI":"10.1186\/s13071-019-3707-1"},{"key":"1326_CR4","unstructured":"Kholodilov, I. S., Litov, A. G., Klimentov, A. S., Belova, O. A., Polienko, A. E., Nikitin, N. A., \u2026 Karganova, G. G. (2020). in Russia, 1\u201317."},{"key":"1326_CR5","doi-asserted-by":"publisher","unstructured":"Zhao, Y., Wu, P., Liu, L., Ma, B., Pan, M., Huang, Y., Du, N., Yu, H., Sui, L., Wang, Z.-D., Hou, Z, Liu, Q. (2022). Characterization and subcellular localization of Alongshan virus proteins. Frontiers in Microbiology, 13(September), 1\u201313. https:\/\/doi.org\/10.3389\/fmicb.2022.1000322","DOI":"10.3389\/fmicb.2022.1000322"},{"key":"1326_CR6","doi-asserted-by":"crossref","unstructured":"Din\u00e7er, E., Hac\u0131o\u011flu, S., Kar, S., Emanet, N., Brinkmann, A., Nitsche, A., \u00d6zkul, A., Linton, Y.M., Erg\u00fcnay, K. (2019). Survey and characterization of Jingmen tick virus variants. Viruses, 11(11), 1071.","DOI":"10.3390\/v11111071"},{"key":"1326_CR7","doi-asserted-by":"publisher","unstructured":"Gao, X., Zhu, K., Wojdyl, J. A., Chen, P., Qin, B., Li, Z., Wang, M., Cui, S. (2020). Crystal structure of the NS3-like helicase from Alongshan virus. IUCrJ, 7, 375\u2013382. https:\/\/doi.org\/10.1107\/S2052252520003632","DOI":"10.1107\/S2052252520003632"},{"key":"1326_CR8","doi-asserted-by":"publisher","first-page":"317","DOI":"10.1016\/j.ebiom.2019.04.004","volume":"43","author":"N Jia","year":"2019","unstructured":"Jia, N., Liu, H.-B., Ni, X.-B., Bell-Sakyi, L., Zheng, Y.-C., Song, J.-L., Li, J., Jiang, B.-G., Wang, Q., Sun, Y., Wei, R., Yuan, T.-T., Xia, L.-Y., Chu, Y.-L., Wei, W., Li, L.-F., Ye, J.-L., Lv, Q.-Y., Cui, X.-M., \u2026 Cao, W.-C. (2019). Emergence of human infection with Jingmen tick virus in China: A retrospective study. eBioMedicine, 43, 317\u2013324. https:\/\/doi.org\/10.1016\/j.ebiom.2019.04.004","journal-title":"eBioMedicine"},{"issue":"5","key":"1326_CR9","doi-asserted-by":"publisher","first-page":"1","DOI":"10.3390\/mps6050079","volume":"6","author":"AG Litov","year":"2023","unstructured":"Litov, A. G., Okhezin, E. V., Kholodilov, I. S., Polienko, A. E., & Karganova, G. G. (2023). Quantitative polymerase chain reaction system for alongshan virus detection. Methods and Protocols, 6(5), 1\u201311. https:\/\/doi.org\/10.3390\/mps6050079","journal-title":"Methods and Protocols"},{"key":"1326_CR10","doi-asserted-by":"crossref","unstructured":"Durgam, L., Pagag, J., Indra Neela, Y., & Guruprasad, L. (2023). Mutational analyses, pharmacophore-based inhibitor design and in silico validation for Zika virus NS3-helicase. Journal of Biomolecular Structure and Dynamics, 42(19), 9873\u20139891.","DOI":"10.1080\/07391102.2023.2252929"},{"key":"1326_CR11","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiomed.2021.104851","volume":"137","author":"B Shaker","year":"2021","unstructured":"Shaker, B., Ahmad, S., Lee, J., Jung, C., & Na, D. (2021). In silico methods and tools for drug discovery. Computers in Biology and Medicine, 137, 104851. https:\/\/doi.org\/10.1016\/j.compbiomed.2021.104851","journal-title":"Computers in Biology and Medicine"},{"key":"1326_CR12","doi-asserted-by":"publisher","first-page":"698","DOI":"10.1016\/j.ejmech.2018.03.024","volume":"150","author":"A Vallone","year":"2018","unstructured":"Vallone, A., D\u2019Alessandro, S., Brogi, S., Brindisi, M., Chemi, G., Alfano, G., Lamponi, S., Lee, S. G., Jez, J. M., Koolen, K. J. M., Dechering, K. J., Saponara, S., Fusi, F., Gorelli, B., Taramelli, D., Parapini, S., Caldelari, R., Campiani, G., Gemma, S., & Butini, S. (2018). Antimalarial agents against both sexual and asexual parasites stages: structure-activity relationships and biological studies of the Malaria Box compound 1-[5-(4-bromo-2-chlorophenyl) furan-2-yl]-N-[(piperidin-4-yl) methyl] methanamine (MMV019918) and ana. European Journal of Medicinal Chemistry, 150, 698\u2013718. https:\/\/doi.org\/10.1016\/j.ejmech.2018.03.024","journal-title":"European Journal of Medicinal Chemistry"},{"key":"1326_CR13","doi-asserted-by":"publisher","first-page":"7","DOI":"10.3389\/fchem.2017.00007","volume":"5","author":"G Chemi","year":"2017","unstructured":"Chemi, G., Gemma, S., Campiani, G., Brogi, S., Butini, S., & Brindisi, M. (2017). Computational tool for fast in silico evaluation of hERG K+ channel affinity. Frontiers in Chemistry, 5, 7. https:\/\/doi.org\/10.3389\/fchem.2017.00007","journal-title":"Frontiers in Chemistry"},{"key":"1326_CR14","doi-asserted-by":"publisher","first-page":"438","DOI":"10.1016\/j.ejmech.2017.06.017","volume":"138","author":"S Brogi","year":"2017","unstructured":"Brogi, S., Ramunno, A., Savi, L., Chemi, G., Alfano, G., Pecorelli, A., Pambianchi, E., Galatello, P., Compagnoni, G., Focher, F., Biamonti, G., Valacchi, G., Butini, S., Gemma, S., Campiani, G., & Brindisi, M. (2017). First dual AK\/GSK-3\u03b2 inhibitors endowed with antioxidant properties as multifunctional, potential neuroprotective agents. European Journal of Medicinal Chemistry, 138, 438\u2013457. https:\/\/doi.org\/10.1016\/j.ejmech.2017.06.017","journal-title":"European Journal of Medicinal Chemistry"},{"key":"1326_CR15","doi-asserted-by":"publisher","first-page":"127","DOI":"10.1016\/j.ejmech.2018.07.069","volume":"157","author":"M Brindisi","year":"2018","unstructured":"Brindisi, M., Senger, J., Cavella, C., Grillo, A., Chemi, G., Gemma, S., Cucinella, D. M., Lamponi, S., Sarno, F., Iside, C., Nebbioso, A., Novellino, E., Shaik, T. B., Romier, C., Herp, D., Jung, M., Butini, S., Campiani, G., Altucci, L., & Brogi, S. (2018). Novel spiroindoline HDAC inhibitors: Synthesis, molecular modelling and biological studies. European Journal of Medicinal Chemistry, 157, 127\u2013138. https:\/\/doi.org\/10.1016\/j.ejmech.2018.07.069","journal-title":"European Journal of Medicinal Chemistry"},{"key":"1326_CR16","doi-asserted-by":"crossref","unstructured":"Douangamath, A., Fearon, D., Gehrtz, P., Krojer, T., Lukacik, P., Owen, C. D., \u2026 \u00c1br\u00e1nyi-Balogh, P. (2020). Crystallographic and electrophilic fragment screening of the SARS-CoV-2 main protease. Nature communications, 11(1), 5047.","DOI":"10.1038\/s41467-020-18709-w"},{"key":"1326_CR17","unstructured":"Kaliappan, S., & Bombay, I. I. T. (2018). UCSF Chimera-Overview."},{"issue":"17","key":"1326_CR18","doi-asserted-by":"publisher","first-page":"6617","DOI":"10.1080\/07391102.2020.1796812","volume":"39","author":"R Yadav","year":"2021","unstructured":"Yadav, R., Imran, M., Dhamija, P., Chaurasia, D. K., & Handu, S. (2021). Virtual screening, ADMET prediction and dynamics simulation of potential compounds targeting the main protease of SARS-CoV-2. Journal of Biomolecular Structure and Dynamics, 39(17), 6617\u20136632.","journal-title":"Journal of Biomolecular Structure and Dynamics"},{"issue":"8","key":"1326_CR19","doi-asserted-by":"publisher","first-page":"361","DOI":"10.6026\/97320630005361","volume":"5","author":"GDJ Davis","year":"2011","unstructured":"Davis, G. D. J., & Vasanthi, A. H. R. (2011). Seaweed metabolite database (SWMD): A database of natural compounds from marine algae. Bioinformation, 5(8), 361.","journal-title":"Bioinformation"},{"issue":"5","key":"1326_CR20","doi-asserted-by":"publisher","first-page":"2596","DOI":"10.1039\/D0RA10322E","volume":"11","author":"RP Vivek-Ananth","year":"2021","unstructured":"Vivek-Ananth, R. P., Sahoo, A. K., Kumaravel, K., Mohanraj, K., & Samal, A. (2021). MeFSAT: A curated natural product database specific to secondary metabolites of medicinal fungi. RSC Advances, 11(5), 2596\u20132607.","journal-title":"RSC Advances"},{"issue":"D1","key":"1326_CR21","doi-asserted-by":"publisher","first-page":"D509","DOI":"10.1093\/nar\/gkaa763","volume":"49","author":"C Lyu","year":"2021","unstructured":"Lyu, C., Chen, T., Qiang, B., Liu, N., Wang, H., Zhang, L., & Liu, Z. (2021). CMNPD: A comprehensive marine natural products database towards facilitating drug discovery from the ocean. Nucleic Acids Research, 49(D1), D509\u2013D515.","journal-title":"Nucleic Acids Research"},{"key":"1326_CR22","doi-asserted-by":"publisher","first-page":"243","DOI":"10.1007\/978-1-4939-2269-7_19","volume-title":"Chemical biology","author":"S Dallakyan","year":"2015","unstructured":"Dallakyan, S., & Olson, A. J. (2015). Small-molecule library screening by docking with PyRx. In J. E. Hempel, C. H. Williams, & C. C. Hong (Eds.), Chemical biology (pp. 243\u2013250). New York, NY: Springer New York. https:\/\/doi.org\/10.1007\/978-1-4939-2269-7_19"},{"issue":"6","key":"1326_CR23","doi-asserted-by":"publisher","first-page":"874","DOI":"10.2174\/1386207323999200820162551","volume":"24","author":"R Dubey","year":"2021","unstructured":"Dubey, R., & Dubey, K. (2021). Molecular docking studies of bioactive nicotiflorin against 6W63 novel coronavirus 2019 (COVID-19). Combinatorial Chemistry & High Throughput Screening, 24(6), 874\u2013878.","journal-title":"Combinatorial Chemistry & High Throughput Screening"},{"key":"1326_CR24","unstructured":"Jejurikar, B. L., & Rohane, S. H. (2021). Drug designing in discovery studio."},{"key":"1326_CR25","unstructured":"Mohammed, I. (2021). Virtual screening of Microalgal compounds as potential inhibitors of Type 2 Human Transmembrane serine protease (TMPRSS2). arXiv preprint arXiv:2108.13764."},{"issue":"1","key":"1326_CR26","doi-asserted-by":"publisher","first-page":"42717","DOI":"10.1038\/srep42717","volume":"7","author":"A Daina","year":"2017","unstructured":"Daina, A., Michielin, O., & Zoete, V. (2017). SwissADME: A free web tool to evaluate pharmacokinetics, drug-likeness and medicinal chemistry friendliness of small molecules. Scientific reports, 7(1), 42717.","journal-title":"Scientific reports"},{"key":"1326_CR27","doi-asserted-by":"crossref","unstructured":"Xiong, G., Wu, Z., Yi, J., Fu, L., Yang, Z., Hsieh, C., Yin, M., Zeng, X., Wu, C., Lu, A., Chen, X., Hou, T., Cao, D., Lu, A. (2021). ADMETlab 2.0: an integrated online platform for accurate and comprehensive predictions of ADMET properties. Nucleic Acids Research, 49(W1), W5\u2013W14.","DOI":"10.1093\/nar\/gkab255"},{"issue":"W1","key":"1326_CR28","doi-asserted-by":"publisher","first-page":"W257","DOI":"10.1093\/nar\/gky318","volume":"46","author":"P Banerjee","year":"2018","unstructured":"Banerjee, P., Eckert, A. O., Schrey, A. K., & Preissner, R. (2018). ProTox-II: A webserver for the prediction of toxicity of chemicals. Nucleic Acids Research, 46(W1), W257\u2013W263.","journal-title":"Nucleic Acids Research"},{"issue":"4","key":"1326_CR29","doi-asserted-by":"publisher","first-page":"604","DOI":"10.1111\/cbdd.13914","volume":"98","author":"S Ahmad","year":"2021","unstructured":"Ahmad, S., Usman Mirza, M., Yean Kee, L., Nazir, M., Abdul Rahman, N., Trant, J. F., & Abdullah, I. (2021). Fragment-based in silico design of SARS-CoV-2 main protease inhibitors. Chemical Biology & Drug Design, 98(4), 604\u2013619.","journal-title":"Chemical Biology & Drug Design"},{"key":"1326_CR30","doi-asserted-by":"crossref","unstructured":"Anwar, F., Saleem, U., Ahmad, B., Ashraf, M., Rehman, A. U., Froeyen, M., Kee, L.Y., Abdullah, I., Mirza, M.U., Ahmad, S. (2020). New naphthalene derivative for cost-effective AChE inhibitors for Alzheimer\u2019s treatment: In silico identification, in vitro and in vivo validation. Computational Biology and Chemistry, 89, 107378.","DOI":"10.1016\/j.compbiolchem.2020.107378"},{"issue":"8","key":"1326_CR31","doi-asserted-by":"publisher","first-page":"1169","DOI":"10.1002\/ddr.21831","volume":"82","author":"N Naheed","year":"2021","unstructured":"Naheed, N., Maher, S., Saleem, F., Khan, A., Wadood, A., Saima Rasheed, M., Choudhary, I., Froeyen, M., Abdullah, I., Mirza, M. U., Trant, J. F., & Ahmad, S. (2021). New isolate from Salvinia molesta with antioxidant and urease inhibitory activity. Drug Development Research, 82(8), 1169\u20131181. https:\/\/doi.org\/10.1002\/ddr.21831","journal-title":"Drug Development Research"},{"issue":"13","key":"1326_CR32","doi-asserted-by":"publisher","first-page":"4936","DOI":"10.1080\/07391102.2020.1782768","volume":"39","author":"MA Alamri","year":"2021","unstructured":"Alamri, M. A., Qamar, M. T. U., MirzaMirza, M. U. M. U., & BhadaneAlqahtaniMuneerFroeyenSalo-Ahen, R. S. M. I. M. O. M. H. (2021). Pharmacoinformatics and molecular dynamics simulation studies reveal potential covalent and FDA-approved inhibitors of SARS-CoV-2 main protease 3CLpro. Journal of Biomolecular Structure and Dynamics, 39(13), 4936\u20134948.","journal-title":"Journal of Biomolecular Structure and Dynamics"},{"key":"1326_CR33","doi-asserted-by":"publisher","DOI":"10.1016\/j.meegid.2020.104451","volume":"84","author":"D Bhowmik","year":"2020","unstructured":"Bhowmik, D., Nandi, R., Jagadeesan, R., Kumar, N., Prakash, A., & Kumar, D. (2020). Identification of potential inhibitors against SARS-CoV-2 by targeting proteins responsible for envelope formation and virion assembly using docking based virtual screening, and pharmacokinetics approaches. Infection, Genetics and Evolution, 84, 104451.","journal-title":"Infection, Genetics and Evolution"},{"key":"1326_CR34","doi-asserted-by":"publisher","DOI":"10.7717\/peerj.9965","volume":"8","author":"VL Kouznetsova","year":"2020","unstructured":"Kouznetsova, V. L., Zhang, A., Tatineni, M., Miller, M. A., & Tsigelny, I. F. (2020). Potential COVID-19 papain-like protease PLpro inhibitors: Repurposing FDA-approved drugs. PeerJ, 8, e9965.","journal-title":"PeerJ"},{"issue":"16","key":"1326_CR35","doi-asserted-by":"publisher","first-page":"9478","DOI":"10.1021\/acs.chemrev.9b00055","volume":"119","author":"E Wang","year":"2019","unstructured":"Wang, E., Sun, H., Wang, J., Wang, Z., Liu, H., Zhang, J. Z. H., & Hou, T. (2019). End-point binding free energy calculation with MM\/PBSA and MM\/GBSA: Strategies and applications in drug design. Chemical Reviews, 119(16), 9478\u20139508.","journal-title":"Chemical Reviews"},{"key":"1326_CR36","doi-asserted-by":"publisher","DOI":"10.1016\/j.mssp.2023.107362","volume":"158","author":"CG Apebende","year":"2023","unstructured":"Apebende, C. G., Ogunwale, G. J., Louis, H., Benjamin, I., Kadiri, M. T., Owen, A. E., & Manicum, A.-L.E. (2023). Density functional theory (DFT) computation of pristine and metal-doped MC59 (M= Au, Hf, Hg, Ir) fullerenes as nitrosourea drug delivery systems. Materials Science in Semiconductor Processing, 158, 107362.","journal-title":"Materials Science in Semiconductor Processing"},{"issue":"8\u20139","key":"1326_CR37","doi-asserted-by":"publisher","first-page":"787","DOI":"10.1002\/ijch.201900114","volume":"60","author":"JML Martin","year":"2020","unstructured":"Martin, J. M. L., & Santra, G. (2020). Empirical double-hybrid density functional theory: A \u2018third way\u2019in between WFT and DFT. Israel Journal of Chemistry, 60(8\u20139), 787\u2013804.","journal-title":"Israel Journal of Chemistry"},{"key":"1326_CR38","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiolchem.2022.107779","volume":"101","author":"MM Nyambe","year":"2022","unstructured":"Nyambe, M. M., Archibong, E. F., & Chinsembu, K. C. (2022). A DFT and molecular docking study of xerantholide and its interaction with Neisseria gonorrhoeae carbonic anhydrase. Computational Biology and Chemistry, 101, 107779.","journal-title":"Computational Biology and Chemistry"},{"issue":"3","key":"1326_CR39","doi-asserted-by":"publisher","first-page":"278","DOI":"10.1002\/jcc.26886","volume":"44","author":"R Pal","year":"2023","unstructured":"Pal, R., & Chattaraj, P. K. (2023). Electrophilicity index revisited. Journal of Computational Chemistry, 44(3), 278\u2013297.","journal-title":"Journal of Computational Chemistry"},{"issue":"6","key":"1326_CR40","doi-asserted-by":"publisher","first-page":"2660","DOI":"10.1021\/acs.jcim.0c00019","volume":"60","author":"G Falc\u00f3n-Cano","year":"2020","unstructured":"Falc\u00f3n-Cano, G., Molina, C., & Cabrera-P\u00e9rez, M. \u00c1. (2020). ADME prediction with KNIME: Development and validation of a publicly available workflow for the prediction of human oral bioavailability. Journal of Chemical Information and Modeling, 60(6), 2660\u20132667.","journal-title":"Journal of Chemical Information and Modeling"},{"issue":"12","key":"1326_CR41","doi-asserted-by":"publisher","first-page":"e05641","DOI":"10.1016\/j.heliyon.2020.e05641","volume":"6","author":"R Alnajjar","year":"2020","unstructured":"Alnajjar, R., Mostafa, A., Kandeil, A., & Al-Karmalawy, A. A. (2020). Molecular docking, molecular dynamics, and in vitro studies reveal the potential of angiotensin II receptor blockers to inhibit the COVID-19 main protease. Heliyon, 6(12), e05641. https:\/\/doi.org\/10.1016\/j.heliyon.2020.e05641","journal-title":"Heliyon"},{"key":"1326_CR42","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiomed.2020.104054","volume":"126","author":"S Skariyachan","year":"2020","unstructured":"Skariyachan, S., Gopal, D., Chakrabarti, S., Kempanna, P., Uttarkar, A., Muddebihalkar, A. G., & Niranjan, V. (2020). Structural and molecular basis of the interaction mechanism of selected drugs towards multiple targets of SARS-CoV-2 by molecular docking and dynamic simulation studies-deciphering the scope of repurposed drugs. Computers in Biology and Medicine, 126, 104054.","journal-title":"Computers in Biology and Medicine"},{"key":"1326_CR43","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/s13321-020-0408-x","volume":"12","author":"N Schaduangrat","year":"2020","unstructured":"Schaduangrat, N., Lampa, S., Simeon, S., Gleeson, M. P., Spjuth, O., & Nantasenamat, C. (2020). Towards reproducible computational drug discovery. Journal of Cheminformatics, 12, 1\u201330.","journal-title":"Journal of Cheminformatics"},{"key":"1326_CR44","unstructured":"Belachew, B. (2022). Biophysical and Biochemical Methods to Determine the Ability of Hepatitis C Virus Non-Structural Protein 3 to Unfold Viral G-Quadruplex Rna Structures. University of Arkansas for Medical Sciences."},{"issue":"2","key":"1326_CR45","doi-asserted-by":"publisher","DOI":"10.1002\/wrna.1688","volume":"13","author":"KE Du Pont","year":"2022","unstructured":"Du Pont, K. E., McCullagh, M., & Geiss, B. J. (2022). Conserved motifs in the flavivirus NS3 RNA helicase enzyme. Wiley Interdisciplinary Reviews: RNA, 13(2), e1688.","journal-title":"Wiley Interdisciplinary Reviews: RNA"},{"issue":"6","key":"1326_CR46","doi-asserted-by":"publisher","first-page":"956","DOI":"10.3390\/v13060956","volume":"13","author":"K Van den Elsen","year":"2021","unstructured":"Van den Elsen, K., Quek, J. P., & Luo, D. (2021). Molecular insights into the flavivirus replication complex. Viruses, 13(6), 956.","journal-title":"Viruses"},{"issue":"5","key":"1326_CR47","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbc.2022.101923","volume":"298","author":"E Grellet","year":"2022","unstructured":"Grellet, E., L\u2019H\u00f4te, I., Goulet, A., & Imbert, I. (2022). Replication of the coronavirus genome: A paradox among positive-strand RNA viruses. Journal of Biological Chemistry, 298(5), 101923. https:\/\/doi.org\/10.1016\/j.jbc.2022.101923","journal-title":"Journal of Biological Chemistry"},{"issue":"12","key":"1326_CR48","doi-asserted-by":"publisher","first-page":"2371","DOI":"10.1021\/acs.jpcb.0c00457","volume":"124","author":"RB Davidson","year":"2020","unstructured":"Davidson, R. B., Hendrix, J., Geiss, B. J., & McCullagh, M. (2020). RNA-dependent structures of the RNA-binding loop in the flavivirus NS3 helicase. The Journal of Physical Chemistry B, 124(12), 2371\u20132381.","journal-title":"The Journal of Physical Chemistry B"},{"issue":"1","key":"1326_CR49","doi-asserted-by":"publisher","first-page":"31","DOI":"10.1134\/S1990750823600188","volume":"17","author":"AA Tsishevskaya","year":"2023","unstructured":"Tsishevskaya, A. A., Gladysheva, A. V., Ternovoi, V. A., & Loktev, V. B. (2023). Structural Motifs and Spatial Structures of Helicase (NS3) and RNA-Dependent RNA-Polymerase (NS5) of a Flavi-Like Kindia Tick Virus (Unclassified Flaviviridae). Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry, 17(1), 31\u201340. https:\/\/doi.org\/10.1134\/S1990750823600188","journal-title":"Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry"},{"issue":"19","key":"1326_CR50","doi-asserted-by":"publisher","first-page":"11217","DOI":"10.1021\/acsomega.0c01353","volume":"5","author":"D Kumar","year":"2020","unstructured":"Kumar, D., Sharma, N., Aarthy, M., Singh, S. K., & Giri, R. (2020). Mechanistic insights into Zika virus NS3 helicase inhibition by epigallocatechin-3-gallate. ACS Omega, 5(19), 11217\u201311226.","journal-title":"ACS Omega"},{"key":"1326_CR51","doi-asserted-by":"publisher","first-page":"335","DOI":"10.1016\/bs.enz.2021.09.005","volume":"50","author":"JC Marecki","year":"2021","unstructured":"Marecki, J. C., Belachew, B., Gao, J., & Raney, K. D. (2021). RNA helicases required for viral propagation in humans. The Enzymes, 50, 335\u2013367.","journal-title":"The Enzymes"}],"container-title":["Molecular Biotechnology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s12033-024-01326-z.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s12033-024-01326-z\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s12033-024-01326-z.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,11,20]],"date-time":"2025-11-20T05:12:17Z","timestamp":1763615537000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s12033-024-01326-z"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,12,6]]},"references-count":51,"journal-issue":{"issue":"12","published-print":{"date-parts":[[2025,12]]}},"alternative-id":["1326"],"URL":"https:\/\/doi.org\/10.1007\/s12033-024-01326-z","relation":{},"ISSN":["1073-6085","1559-0305"],"issn-type":[{"value":"1073-6085","type":"print"},{"value":"1559-0305","type":"electronic"}],"subject":[],"published":{"date-parts":[[2024,12,6]]},"assertion":[{"value":"29 June 2024","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"11 November 2024","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"6 December 2024","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"The authors declare no conflict of interest.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Conflicts of Interest"}}]}}