{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,10]],"date-time":"2026-10-10T22:48:22Z","timestamp":1791672502832,"version":"4.3.4"},"reference-count":21,"publisher":"Springer Science and Business Media LLC","issue":"5","license":[{"start":{"date-parts":[[2026,5,7]],"date-time":"2026-05-07T00:00:00Z","timestamp":1778112000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2026,5,7]],"date-time":"2026-05-07T00:00:00Z","timestamp":1778112000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"funder":[{"name":"GTU-IQAC","award":["GTU\/IQAC\/SMS\/PCL-C5\/2024\/9184"],"award-info":[{"award-number":["GTU\/IQAC\/SMS\/PCL-C5\/2024\/9184"]}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Indian J Microbiol"],"published-print":{"date-parts":[[2026,10]]},"DOI":"10.1007\/s12088-026-01556-6","type":"journal-article","created":{"date-parts":[[2026,5,7]],"date-time":"2026-05-07T19:43:34Z","timestamp":1778183014000},"page":"1257-1262","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["A Trench Plate-Based Approach for the Selective Isolation of Metal-Cycling Bacteria"],"prefix":"10.1007","volume":"66","author":[{"given":"Riya","family":"Desai","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Nandan","family":"Trivedi","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Manasvi","family":"Ladola","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bhavina","family":"Rathva","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Aarti","family":"Desai","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Himanshi","family":"Katariya","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Srinivas","family":"Duggirala","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1224-362X","authenticated-orcid":false,"given":"Chandrashekar","family":"Mootapally","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Neelam","family":"Nathani","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2026,5,7]]},"reference":[{"issue":"1","key":"1556_CR1","doi-asserted-by":"publisher","DOI":"10.1186\/s40168-023-01601-2","volume":"11","author":"D Zhang","year":"2023","unstructured":"Zhang D, Li X, Wu Y et al (2023) Microbe-driven elemental cycling enables microbial adaptation to deep-sea ferromanganese nodule sediment fields. Microbiome 11(1):160. https:\/\/doi.org\/10.1186\/s40168-023-01601-2","journal-title":"Microbiome"},{"issue":"11","key":"1556_CR2","doi-asserted-by":"publisher","first-page":"1403","DOI":"10.3390\/MIN12111403","volume":"12","author":"O Strbak","year":"2022","unstructured":"Strbak O, Hnilicova P, Gombos J et al (2022) Magnetotactic bacteria: from evolution to biomineralization and biomedical applications. Minerals 12(11):1403. https:\/\/doi.org\/10.3390\/MIN12111403","journal-title":"Minerals"},{"issue":"3","key":"1556_CR3","doi-asserted-by":"publisher","first-page":"823","DOI":"10.1111\/1462-2920.14708","volume":"22","author":"M Amor","year":"2020","unstructured":"Amor M, Tharaud M, G\u00e9labert A, Komeili A (2020) Single-cell determination of iron content in magnetotactic bacteria: implications for the iron biogeochemical cycle. Environ Microbiol 22(3):823\u2013831. https:\/\/doi.org\/10.1111\/1462-2920.14708","journal-title":"Environ Microbiol"},{"key":"1556_CR4","doi-asserted-by":"publisher","first-page":"919","DOI":"10.1016\/J.MSEC.2016.07.049","volume":"68","author":"JJ Jacob","year":"2016","unstructured":"Jacob JJ, Suthindhiran K (2016) Magnetotactic bacteria and magnetosomes\u2014scope and challenges. Mater Sci Eng C Mater Biol Appl 68:919\u2013928. https:\/\/doi.org\/10.1016\/J.MSEC.2016.07.049","journal-title":"Mater Sci Eng C Mater Biol Appl"},{"key":"1556_CR5","doi-asserted-by":"publisher","DOI":"10.1007\/S00248-025-02494-4","volume":"87","author":"Z Wang","year":"2025","unstructured":"Wang Z, Fuad MTI, Liu J et al (2025) Spatial patterns of microbial communities in intertidal sediments of the yellow river Estuary, China. Microb Ecol 87:173. https:\/\/doi.org\/10.1007\/S00248-025-02494-4","journal-title":"Microb Ecol"},{"key":"1556_CR6","doi-asserted-by":"publisher","first-page":"1501","DOI":"10.1038\/s12276-024-01262-7","volume":"56","author":"N Kim","year":"2024","unstructured":"Kim N, Ma J, Kim W et al (2024) Genome-resolved metagenomics: a game changer for microbiome medicine. Mol Med 56:1501\u20131512. https:\/\/doi.org\/10.1038\/s12276-024-01262-7","journal-title":"Mol Med"},{"key":"1556_CR7","doi-asserted-by":"publisher","DOI":"10.1016\/j.jmarsys.2019.103239","volume":"201","author":"D Fernandes","year":"2020","unstructured":"Fernandes D, Wu Y, Shirodkar P et al (2020) Sources and preservation dynamics of organic matter in surface sediments of Narmada River, India\u2013illustrated by amino acids. J Mar Syst 201:103239. https:\/\/doi.org\/10.1016\/j.jmarsys.2019.103239","journal-title":"J Mar Syst"},{"key":"1556_CR8","doi-asserted-by":"publisher","first-page":"577","DOI":"10.1021\/acsami.2c18435","volume":"15","author":"D Gandia","year":"2023","unstructured":"Gandia D, Marcano L, Gandarias L et al (2023) Tuning the magnetic response of Magnetospirillum magneticum by changing the culture medium: a straightforward approach to improve their hyperthermia efficiency. ACS Appl Mater Interfaces 15:577. https:\/\/doi.org\/10.1021\/acsami.2c18435","journal-title":"ACS Appl Mater Interfaces"},{"key":"1556_CR9","doi-asserted-by":"publisher","first-page":"7755","DOI":"10.1128\/AEM.02143-13","volume":"79","author":"E Katzmann","year":"2013","unstructured":"Katzmann E, Eibauer M, Lin W et al (2013) Analysis of magnetosome chains in magnetotactic bacteria by magnetic measurements and automated image analysis of electron micrographs. Environ Microbiol 79:7755\u20137762. https:\/\/doi.org\/10.1128\/AEM.02143-13","journal-title":"Environ Microbiol"},{"key":"1556_CR10","doi-asserted-by":"publisher","first-page":"50123","DOI":"10.3791\/50123","volume":"69","author":"Z Oestreicher","year":"2012","unstructured":"Oestreicher Z, Lower S et al (2012) Collection, isolation and enrichment of naturally occurring magnetotactic bacteria from the environment. Vis Exp Jove 69:50123. https:\/\/doi.org\/10.3791\/50123","journal-title":"Vis Exp Jove"},{"key":"1556_CR11","unstructured":"Dorado Oxford Nanopore Technologies. https:\/\/nanoporetech.com\/software\/other\/dorado. Accessed 18 Apr 2025"},{"key":"1556_CR12","doi-asserted-by":"publisher","first-page":"535","DOI":"10.1093\/nar\/gkw1017","volume":"45","author":"AR Wattam","year":"2016","unstructured":"Wattam AR, Davis JJ, Assaf R et al (2016) Improvements to PATRIC, the all-bacterial bioinformatics database and analysis resource center. Nucleic Acids Res 45:535\u2013542. https:\/\/doi.org\/10.1093\/nar\/gkw1017","journal-title":"Nucleic Acids Res"},{"issue":"1","key":"1556_CR13","doi-asserted-by":"publisher","first-page":"33","DOI":"10.1186\/s40168-021-01213-8","volume":"10","author":"Z Zhou","year":"2021","unstructured":"Zhou Z, Tran PQ, Breister AM et al (2021) METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks. Microbiome 10(1):33. https:\/\/doi.org\/10.1186\/s40168-021-01213-8","journal-title":"Microbiome"},{"issue":"4","key":"1556_CR14","doi-asserted-by":"publisher","DOI":"10.1007\/S40899-024-01131-1","volume":"10","author":"D Gupta","year":"2024","unstructured":"Gupta D, Shukla R, Srivastava PK, Mishra VK (2024) Assessment of heavy metal pollution level, ecological and human health risks in surface water of Narmada River, India. Sustain Water Resour Manag 10(4):154. https:\/\/doi.org\/10.1007\/S40899-024-01131-1","journal-title":"Sustain Water Resour Manag"},{"key":"1556_CR15","doi-asserted-by":"publisher","first-page":"1308953","DOI":"10.3389\/fmars.2023.1308953","volume":"10","author":"P Verma","year":"2023","unstructured":"Verma P, Pandey V, Seleyi SC et al (2023) Exploring the hidden treasures: Deep-sea bacterial community structure in the Bay of Bengal and their metabolic profile. Front Mar Sci 10:1308953. https:\/\/doi.org\/10.3389\/fmars.2023.1308953","journal-title":"Front Mar Sci"},{"key":"1556_CR16","doi-asserted-by":"publisher","first-page":"10679","DOI":"10.1007\/S11356-016-6198-Z","volume":"23","author":"S Roosa","year":"2016","unstructured":"Roosa S, Prygiel E, Lesven L et al (2016) On the bioavailability of trace metals in surface sediments: a combined geochemical and biological approach. Environ Sci Pollut Res 23:10679\u201310692. https:\/\/doi.org\/10.1007\/S11356-016-6198-Z","journal-title":"Environ Sci Pollut Res"},{"key":"1556_CR17","doi-asserted-by":"publisher","first-page":"327","DOI":"10.1080\/1040841X.2021.1970512","volume":"48","author":"A Pal","year":"2022","unstructured":"Pal A, Bhattacharjee S, Saha J et al (2022) Bacterial survival strategies and responses under heavy metal stress: a comprehensive overview. Crit Rev Microbiol 48:327\u2013355. https:\/\/doi.org\/10.1080\/1040841X.2021.1970512","journal-title":"Crit Rev Microbiol"},{"issue":"3","key":"1556_CR18","doi-asserted-by":"publisher","first-page":"83","DOI":"10.15406\/mseij.2024.08.00241","volume":"8","author":"S Hossain","year":"2024","unstructured":"Hossain S, Bahreini B et al (2024) Magnetotactic bacteria and magnetosomes\u2013an overview. Mater Sci Eng Int J 8(3):83\u2013100. https:\/\/doi.org\/10.15406\/mseij.2024.08.00241","journal-title":"Mater Sci Eng Int J"},{"key":"1556_CR19","doi-asserted-by":"publisher","first-page":"14","DOI":"10.34172\/ajehe.2020.03","volume":"7","author":"G Asgari","year":"2020","unstructured":"Asgari G, Khoshniyat R et al (2020) Survey of magneto-tactic properties of Escherichia coli under static magnetic fields. Avicenna J Environ Health Eng 7:14\u201319. https:\/\/doi.org\/10.34172\/ajehe.2020.03","journal-title":"Avicenna J Environ Health Eng"},{"key":"1556_CR20","doi-asserted-by":"publisher","unstructured":"Ricciardelli A, De Pins B, Brusca J, et al (2025) Trace metals availability controls terminal electron acceptor utilization in Escherichia coli. bioRxiv https:\/\/doi.org\/10.1101\/2025.01.08.631794","DOI":"10.1101\/2025.01.08.631794"},{"key":"1556_CR21","doi-asserted-by":"publisher","unstructured":"Chakraborty S, Ardern Z, Aliyu H, et al (2025) Annotating Hypothetical Proteins in Escherichia coli K-12. biorxiv https:\/\/doi.org\/10.1101\/2025.03.20.643886","DOI":"10.1101\/2025.03.20.643886"}],"container-title":["Indian Journal of Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s12088-026-01556-6.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s12088-026-01556-6","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s12088-026-01556-6.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,10,10]],"date-time":"2026-10-10T21:50:47Z","timestamp":1791669047000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s12088-026-01556-6"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,5,7]]},"references-count":21,"journal-issue":{"issue":"5","published-print":{"date-parts":[[2026,10]]}},"alternative-id":["1556"],"URL":"https:\/\/doi.org\/10.1007\/s12088-026-01556-6","relation":{},"ISSN":["0046-8991","0973-7715"],"issn-type":[{"value":"0046-8991","type":"print"},{"value":"0973-7715","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,5,7]]},"assertion":[{"value":"19 April 2025","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"21 April 2026","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"7 May 2026","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"The authors have declared no conflict of interest.","order":1,"name":"Ethics","label":"Conflict of interest","group":{"name":"EthicsHeading","label":"Declarations"}}]}}