{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,28]],"date-time":"2026-08-28T04:17:49Z","timestamp":1787890669424,"version":"build-2784847793"},"reference-count":114,"publisher":"Springer Science and Business Media LLC","license":[{"start":{"date-parts":[[2026,8,28]],"date-time":"2026-08-28T00:00:00Z","timestamp":1787875200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2026,8,28]],"date-time":"2026-08-28T00:00:00Z","timestamp":1787875200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Folia Microbiol"],"DOI":"10.1007\/s12223-026-01575-2","type":"journal-article","created":{"date-parts":[[2026,8,28]],"date-time":"2026-08-28T04:00:07Z","timestamp":1787889607000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Revisiting plant\u2013microbe interaction mechanisms for developing efficient biostimulants"],"prefix":"10.1007","author":[{"given":"Payal","family":"Chakraborty","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bandana","family":"Bose","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Deepika","family":"Sharma","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4184-8345","authenticated-orcid":false,"given":"Devendra Kumar","family":"Choudhary","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2026,8,28]]},"reference":[{"issue":"10","key":"1575_CR1","doi-asserted-by":"publisher","first-page":"179","DOI":"10.3390\/d11100179","volume":"11","author":"TT Alawiye","year":"2019","unstructured":"Alawiye TT, Babalola OO (2019) Bacterial diversity and community structure in typical plant rhizosphere. Diversity 11(10):179. https:\/\/doi.org\/10.3390\/d11100179","journal-title":"Diversity"},{"key":"1575_CR2","doi-asserted-by":"publisher","first-page":"57","DOI":"10.1002\/moda.5","volume":"1","author":"OO Aluko","year":"2023","unstructured":"Aluko OO, Liu Z, Sun X (2023) The interplay of carbon and nitrogen distribution: Prospects for improved crop yields. Mod Agric 1:57\u201375. https:\/\/doi.org\/10.1002\/moda.5","journal-title":"Mod Agric"},{"issue":"6","key":"1575_CR3","doi-asserted-by":"publisher","DOI":"10.1016\/j.sjbs.2023.103664","volume":"30","author":"FA Ansari","year":"2023","unstructured":"Ansari FA, Ahmad I, Pichtel J (2023) Synergistic effects of biofilm-producing PGPR strains on wheat plant colonization, growth and soil resilience under drought stress. Saudi J Biol Sci 30(6):103664. https:\/\/doi.org\/10.1016\/j.sjbs.2023.103664","journal-title":"Saudi J Biol Sci"},{"key":"1575_CR4","doi-asserted-by":"publisher","first-page":"875774","DOI":"10.3389\/fpls.2022.875774","volume":"13","author":"M Azeem","year":"2022","unstructured":"Azeem M, Iqbal N, Radha R et al (2022) Mechanistic insights into plant growth-promoting rhizobacteria-mediated abiotic stress tolerance in crops. Front Plant Sci 13:875774. https:\/\/doi.org\/10.3389\/fpls.2022.875774","journal-title":"Front Plant Sci"},{"key":"1575_CR5","doi-asserted-by":"publisher","first-page":"1473","DOI":"10.3389\/fpls.2018.01473","volume":"9","author":"R Backer","year":"2018","unstructured":"Backer R, Rokem JS, Ilangumaran G, Lamont J, Praslickova D, Ricci E, Subramanian S, Smith DL (2018) Plant growth-promoting rhizobacteria: context, mechanisms of action, and roadmap to commercialization of biostimulants for sustainable agriculture. Front Plant Sci 9:1473. https:\/\/doi.org\/10.3389\/fpls.2018.01473","journal-title":"Front Plant Sci"},{"key":"1575_CR6","doi-asserted-by":"publisher","first-page":"164","DOI":"10.1016\/j.ecoleng.2017.03.008","volume":"103","author":"E Bakhshandeh","year":"2017","unstructured":"Bakhshandeh E, Pirdashti H, Lendeh KS (2017) Phosphate and potassium-solubilizing bacteria effect on the growth of rice. Ecol Eng 103:164\u2013169. https:\/\/doi.org\/10.1016\/j.ecoleng.2017.03.008","journal-title":"Ecol Eng"},{"issue":"2","key":"1575_CR7","doi-asserted-by":"publisher","DOI":"10.2136\/vzj2011.0111","volume":"11","author":"AG Bengough","year":"2012","unstructured":"Bengough AG (2012) Water dynamics of the root zone: rhizosphere biophysics and its control on soil hydrology. Vadose Zone J 11(2):vzj2011-0111. https:\/\/doi.org\/10.2136\/vzj2011.0111","journal-title":"Vadose Zone J"},{"key":"1575_CR8","doi-asserted-by":"publisher","first-page":"66","DOI":"10.1186\/1475-2859-13-66","volume":"13","author":"D Bhardwaj","year":"2014","unstructured":"Bhardwaj D, Ansari MW, Sahoo RK, Tuteja N (2014) Biofertilizers function as key player in sustainable agriculture by improving soil fertility, plant tolerance and crop productivity. Microb Cell Fact 13:66. https:\/\/doi.org\/10.1186\/1475-2859-13-66","journal-title":"Microb Cell Fact"},{"issue":"4","key":"1575_CR9","doi-asserted-by":"publisher","first-page":"1327","DOI":"10.1007\/s11274-011-0979-9","volume":"28","author":"PN Bhattacharyya","year":"2012","unstructured":"Bhattacharyya PN, Jha DK (2012) Plant growth-promoting rhizobacteria (PGPR): emergence in agriculture. World J Microbiol Biotechnol 28(4):1327\u20131350. https:\/\/doi.org\/10.1007\/s11274-011-0979-9","journal-title":"World J Microbiol Biotechnol"},{"issue":"8","key":"1575_CR10","doi-asserted-by":"publisher","first-page":"835","DOI":"10.1094\/MPMI-10-12-0249-CR","volume":"26","author":"V Bitas","year":"2013","unstructured":"Bitas V, Kim HS, Bennett JW, Kang S (2013) Sniffing on microbes: diverse roles of microbial volatile organic compounds in plant health. Mol Plant-Microbe Interact 26(8):835\u2013843. https:\/\/doi.org\/10.1094\/MPMI-10-12-0249-CR","journal-title":"Mol Plant-Microbe Interact"},{"issue":"8","key":"1575_CR11","doi-asserted-by":"publisher","first-page":"15838","DOI":"10.3390\/ijms140815838","volume":"14","author":"PC Bogino","year":"2013","unstructured":"Bogino PC, De las Mercedes Oliva M, Sorroche FG, Giordano W (2013) The role of bacterial biofilms and surface components in plant-bacterial associations. Int J Mol Sci 14(8):15838\u201315859. https:\/\/doi.org\/10.3390\/ijms140815838","journal-title":"Int J Mol Sci"},{"issue":"6504","key":"1575_CR12","doi-asserted-by":"publisher","first-page":"663","DOI":"10.1126\/science.abb3377","volume":"369","author":"Z Bozsoki","year":"2020","unstructured":"Bozsoki Z, Gysel K, Hansen SB, Lironi D, Kr\u00f6nauer C, Feng F, de Jong N, Vinther M, Kamble M, Thygesen MB, Engholm E (2020) Ligand-recognizing motifs in plant LysM receptors are major determinants of specificity. Science 369(6504):663\u2013670. https:\/\/doi.org\/10.1126\/science.abb3377","journal-title":"Science"},{"key":"1575_CR13","doi-asserted-by":"publisher","first-page":"213","DOI":"10.1146\/annurev-arplant-042817-040405","volume":"69","author":"Q Cai","year":"2018","unstructured":"Cai Q, He B, Wang S, Fletcher S, Niu D, Mitter K, Birch PRJ, Jin H (2018) Message in a bubble: shuttling small RNAs and proteins between cells and interacting organisms using extracellular vesicles. Annu Rev Plant Biol 69:213\u2013234. https:\/\/doi.org\/10.1146\/annurev-arplant-042817-040405","journal-title":"Annu Rev Plant Biol"},{"key":"1575_CR14","doi-asserted-by":"publisher","first-page":"127291","DOI":"10.1016\/j.micres.2022.127291","volume":"268","author":"P Chaudhary","year":"2023","unstructured":"Chaudhary P, Sharma A, Singh B, Nagpal AK (2023) Bioinoculants as sustainable alternatives for plant growth promotion and disease management. Microbiol Res 268:127291. https:\/\/doi.org\/10.1016\/j.micres.2022.127291","journal-title":"Microbiol Res"},{"key":"1575_CR15","doi-asserted-by":"publisher","first-page":"1758","DOI":"10.3389\/fpls.2019.01758","volume":"10","author":"X Chen","year":"2020","unstructured":"Chen X, Marsza\u0142kowska M, Reinhold-Hurek B (2020) Jasmonic Acid, Not Salicylic Acid Restricts Endophytic Root Colonization of Rice. Front Plant Sci 10:1758. https:\/\/doi.org\/10.3389\/fpls.2019.01758","journal-title":"Front Plant Sci"},{"issue":"5","key":"1575_CR16","doi-asserted-by":"publisher","first-page":"a040964","DOI":"10.1101\/cshperspect.a040964","volume":"13","author":"CH Chiu","year":"2021","unstructured":"Chiu CH, Paszkowski U (2021) Mechanisms and Impact of Symbiotic Phosphate Acquisition. Cold Spring Harb Perspect Biol 13(5):a040964. https:\/\/doi.org\/10.1101\/cshperspect.a040964","journal-title":"Cold Spring Harb Perspect Biol"},{"issue":"5","key":"1575_CR17","doi-asserted-by":"publisher","first-page":"669","DOI":"10.1016\/j.soilbio.2009.11.024","volume":"42","author":"S Compant","year":"2010","unstructured":"Compant S, Clement C, Sessitsch A (2010) Plant growth-promoting bacteria in the rhizo- and endosphere of plants: Their role, colonisation, mechanisms involved and prospects for utilisation. Soil Biol Biochem 42(5):669\u2013678. https:\/\/doi.org\/10.1016\/j.soilbio.2009.11.024","journal-title":"Soil Biol Biochem"},{"key":"1575_CR18","doi-asserted-by":"publisher","first-page":"1179","DOI":"10.3389\/fpls.2020.01179","volume":"11","author":"RSC De Souza","year":"2020","unstructured":"De Souza RSC, Armanhi JSL, Arruda P (2020) From microbiome to traits: designing synthetic microbial communities for improved crop resiliency. Front Plant Sci 11:1179. https:\/\/doi.org\/10.3389\/fpls.2020.01179","journal-title":"Front Plant Sci"},{"issue":"1","key":"1575_CR19","doi-asserted-by":"publisher","first-page":"368","DOI":"10.1038\/s42003-019-0614-0","volume":"2","author":"Y Deng","year":"2019","unstructured":"Deng Y, Chen H, Li C, Xu J, Qi Q, Xu Y, Zhu Y, Zheng J, Peng D, Ruan L, Sun M (2019) Endophyte Bacillus subtilis evade plant defence by producing antibiotic subtilomycin to mask self-produced flagellin. Commun Biol 2(1):368. https:\/\/doi.org\/10.1038\/s42003-019-0614-0","journal-title":"Commun Biol"},{"key":"1575_CR20","doi-asserted-by":"publisher","first-page":"60","DOI":"10.1111\/nph.17082","volume":"230","author":"FA Dijkstra","year":"2021","unstructured":"Dijkstra FA, Zhu B, Cheng W (2021) Root effects on soil organic carbon: a double-edged sword. New Phytol 230:60\u201365. https:\/\/doi.org\/10.1111\/nph.17082","journal-title":"New Phytol"},{"key":"1575_CR21","doi-asserted-by":"publisher","first-page":"2104","DOI":"10.3389\/fmicb.2017.02104","volume":"8","author":"D Egamberdieva","year":"2017","unstructured":"Egamberdieva D, Wirth SJ, Alqarawi AA, Abd Allah EF, Hashem A (2017) Phytohormones and beneficial microbes: essential components for plants to balance stress and fitness. Front Microbiol 8:2104. https:\/\/doi.org\/10.3389\/fmicb.2017.02104","journal-title":"Front Microbiol"},{"key":"1575_CR22","doi-asserted-by":"publisher","first-page":"257","DOI":"10.1146\/annurev-phyto-021621-121447","volume":"61","author":"C Escudero-Martinez","year":"2023","unstructured":"Escudero-Martinez C, Bulgarelli D (2023) Engineering the crop microbiota through host genetics. Annu Rev Phytopathol 61:257\u2013277. https:\/\/doi.org\/10.1146\/annurev-phyto-021621-121447","journal-title":"Annu Rev Phytopathol"},{"key":"1575_CR23","doi-asserted-by":"publisher","DOI":"10.1016\/j.micres.2024.127602","volume":"281","author":"H Etesami","year":"2024","unstructured":"Etesami H, Glick BR (2024) Bacterial indole-3-acetic acid: a key regulator for plant growth, plant-microbe interactions, and agricultural adaptive resilience. Microbiol Res 281:127602. https:\/\/doi.org\/10.1016\/j.micres.2024.127602","journal-title":"Microbiol Res"},{"issue":"3","key":"1575_CR24","doi-asserted-by":"publisher","first-page":"e70006","DOI":"10.1002\/sae2.70006","volume":"3","author":"AE Fadiji","year":"2024","unstructured":"Fadiji AE, Xiong C, Egidi E, Singh BK (2024) Formulation challenges associated with microbial biofertilizers in sustainable agriculture and paths forward. J Sustain Agric Environ 3(3):e70006. https:\/\/doi.org\/10.1002\/sae2.70006","journal-title":"J Sustain Agric Environ"},{"key":"1575_CR25","doi-asserted-by":"publisher","first-page":"91","DOI":"10.1186\/s40793-024-00638-6","volume":"19","author":"Z Feng","year":"2024","unstructured":"Feng Z, Liang Q, Yao Q, Bai Y, Zhu H (2024) The role of the rhizobiome recruited by root exudates in plant disease resistance: current status and future directions. Environm Microbiome 19:91. https:\/\/doi.org\/10.1186\/s40793-024-00638-6","journal-title":"Environm Microbiome"},{"key":"1575_CR26","doi-asserted-by":"publisher","first-page":"155","DOI":"10.1016\/j.pbi.2017.04.018","volume":"38","author":"OM Finkel","year":"2017","unstructured":"Finkel OM, Castrillo G, Herrera Paredes S, Salas Gonz\u00e1lez I, Dangl JL (2017) Understanding and exploiting plant beneficial microbes. Curr Opin Plant Biol 38:155\u2013163. https:\/\/doi.org\/10.1016\/j.pbi.2017.04.018","journal-title":"Curr Opin Plant Biol"},{"key":"1575_CR27","doi-asserted-by":"publisher","first-page":"2082","DOI":"10.1111\/gcb.12816","volume":"21","author":"AC Finzi","year":"2015","unstructured":"Finzi AC, Abramoff RZ, Spiller KS, Brzostek ER, Darby BA, Kramer MA, Phillips RP (2015) Rhizosphere processes are quantitatively important components of terrestrial carbon and nutrient cycles. Glob Change Biol 21:2082\u20132094. https:\/\/doi.org\/10.1111\/gcb.12816","journal-title":"Glob Change Biol"},{"issue":"9","key":"1575_CR28","doi-asserted-by":"publisher","first-page":"563","DOI":"10.1038\/nrmicro.2016.94","volume":"14","author":"HC Flemming","year":"2016","unstructured":"Flemming HC, Wingender J, Szewzyk U, Steinberg P, Rice SA, Kjelleberg S (2016) Biofilms: an emergent form of bacterial life. Nat Rev Microbiol 14(9):563\u2013575. https:\/\/doi.org\/10.1038\/nrmicro.2016.94","journal-title":"Nat Rev Microbiol"},{"key":"1575_CR29","doi-asserted-by":"publisher","first-page":"95","DOI":"10.1016\/j.aoas.2015.04.001","volume":"60","author":"AH Fouda","year":"2015","unstructured":"Fouda AH, Hassan S-D, Eid AM, Ewais E-D (2015) Biotechnological applications of fungal endophytes associated with medicinal plant Asclepias sinaica (Bioss.). Ann Agric Sci 60:95\u2013104. https:\/\/doi.org\/10.1016\/j.aoas.2015.04.001","journal-title":"Ann Agric Sci"},{"key":"1575_CR30","doi-asserted-by":"publisher","first-page":"1709","DOI":"10.3389\/fmicb.2018.01709","volume":"9","author":"J Fukami","year":"2018","unstructured":"Fukami J, Ollero FJ, Meg\u00edas M, Hungria M (2018) Phytohormones and diazotrophs contribute to increased maize tolerance to drought stress. Front Microbiol 9:1709. https:\/\/doi.org\/10.3389\/fmicb.2018.01709","journal-title":"Front Microbiol"},{"issue":"9","key":"1575_CR31","doi-asserted-by":"publisher","first-page":"1738","DOI":"10.3732\/ajb.1200572","volume":"100","author":"JR Gaiero","year":"2013","unstructured":"Gaiero JR, McCall CA, Thompson KA, Day NJ, Best AS, Dunfield KE (2013) Inside the root microbiome: Bacterial root endophytes and plant growth promotion. Am J Bot 100(9):1738\u20131750. https:\/\/doi.org\/10.3732\/ajb.1200572","journal-title":"Am J Bot"},{"issue":"2","key":"1575_CR32","doi-asserted-by":"publisher","first-page":"430","DOI":"10.3390\/agronomy12020430","volume":"12","author":"FS Galindo","year":"2022","unstructured":"Galindo FS, Teixeira Filho MCM, Buzetti S, Rodrigues WL, Boleta EHM, Rosa PAL, Ferrari S, Fernandes GC, Muraoka T (2022) Inoculation with Azospirillum brasilense associated with foliar application of amino acids improves physiological responses, nutrient uptake, water-use efficiency and grain yield under water deficit conditions. Agronomy 12(2):430. https:\/\/doi.org\/10.3390\/agronomy12020430","journal-title":"Agronomy"},{"key":"1575_CR33","doi-asserted-by":"publisher","unstructured":"Gamalero E, Glick BR (2011) Mechanisms used by plant growth-promoting bacteria. Bacteria in agrobiology: Plant nutrient management. Springer, Berlin, Heidelberg, pp 17\u201346. https:\/\/doi.org\/10.1007\/978-3-642-21061-7_2","DOI":"10.1007\/978-3-642-21061-7_2"},{"issue":"3","key":"1575_CR34","doi-asserted-by":"publisher","first-page":"1195","DOI":"10.1007\/s00203-020-02113-5","volume":"203","author":"N Ghazy","year":"2021","unstructured":"Ghazy N, El-Nahrawy S (2021) Siderophore production by Bacillus subtilis MF497446 and Pseudomonas koreensis MG209738 and their efficacy in controlling Cephalosporium maydis in maize plant. Arch Microbiol 203(3):1195\u20131209. https:\/\/doi.org\/10.1007\/s00203-020-02113-5","journal-title":"Arch Microbiol"},{"key":"1575_CR35","doi-asserted-by":"publisher","unstructured":"Griffin C, O, MT &, Demirer GS (2024) Engineering plant\u2013microbe communication for plant nutrient use efficiency. Curr Opin Biotechnol 88:103150. https:\/\/doi.org\/10.1016\/j.copbio.2024.103150","DOI":"10.1016\/j.copbio.2024.103150"},{"key":"1575_CR36","doi-asserted-by":"publisher","first-page":"1","DOI":"10.2174\/1874285801509010001","volume":"9","author":"S Haldar","year":"2015","unstructured":"Haldar S, Sengupta S (2015) Plant-microbe cross-talk in the rhizosphere: insight and biotechnological potential. Open Microbiol J 9:1\u20137. https:\/\/doi.org\/10.2174\/1874285801509010001","journal-title":"Open Microbiol J"},{"key":"1575_CR37","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2020.542053","volume":"11","author":"MM Haque","year":"2020","unstructured":"Haque MM, Mosharaf MK, Khatun M, Haque MA, Biswas MS, Islam MS, Siddiquee MA (2020) Biofilm producing rhizobacteria with multiple plant growth-promoting traits promote growth of tomato under water-deficit stress. Front Microbiol 11:542053. https:\/\/doi.org\/10.3389\/fmicb.2020.542053","journal-title":"Front Microbiol"},{"issue":"7","key":"1575_CR38","doi-asserted-by":"publisher","first-page":"142","DOI":"10.3390\/agriculture9070142","volume":"9","author":"MK Hassan","year":"2019","unstructured":"Hassan MK, McInroy JA, Kloepper JW (2019) The interactions of rhizodeposits with plant growth-promoting rhizobacteria in the rhizosphere: a review. Agriculture 9(7):142. https:\/\/doi.org\/10.3390\/agriculture9070142","journal-title":"Agriculture"},{"key":"1575_CR39","doi-asserted-by":"publisher","DOI":"10.3389\/fpls.2021.796045","volume":"12","author":"JP Hawkins","year":"2022","unstructured":"Hawkins JP, Oresnik IJ (2022) The rhizobium\u2013legume symbiosis: co-opting successful stress management. Front Plant Sci 12:796045. https:\/\/doi.org\/10.3389\/fpls.2021.796045","journal-title":"Front Plant Sci"},{"issue":"3","key":"1575_CR40","doi-asserted-by":"publisher","first-page":"316","DOI":"10.1111\/mpp.12187","volume":"16","author":"Y Helman","year":"2015","unstructured":"Helman Y, Chernin L (2015) Silencing the mob: disrupting quorum sensing as a means to fight plant disease. Mol Plant Pathol 16(3):316\u2013329. https:\/\/doi.org\/10.1111\/mpp.12187","journal-title":"Mol Plant Pathol"},{"issue":"4","key":"1575_CR41","doi-asserted-by":"publisher","first-page":"4661","DOI":"10.3390\/s120404661","volume":"12","author":"KW Hong","year":"2012","unstructured":"Hong KW, Koh CL, Sam CK, Yin WF, Chan KG (2012) Quorum quenching revisited\u2014from signal decays to signalling confusion. Sens (Basel) 12(4):4661\u20134696. https:\/\/doi.org\/10.3390\/s120404661","journal-title":"Sens (Basel)"},{"issue":"2","key":"1575_CR114","doi-asserted-by":"publisher","first-page":"77","DOI":"10.3390\/agronomy9020077","volume":"9","author":"AZ Htwe","year":"2019","unstructured":"Htwe AZ, Moh SM, Soe KM, Moe K, Yamakawa T (2019) Effects of biofertilizer produced from Bradyrhizobium and Streptomyces griseoflavus on plant growth, nodulation, nitrogen fixation, nutrient uptake, and seed yield of mung bean, cowpea, and soybean. Agronomy 9(2):77. https:\/\/doi.org\/10.3390\/agronomy9020077","journal-title":"Agronomy"},{"issue":"1","key":"1575_CR42","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-018-05122-7","volume":"9","author":"L Hu","year":"2018","unstructured":"Hu L, Robert CA, Cadot S, Zhang XI, Ye M, Li B, Erb M (2018) Root exudate metabolites drive plant-soil feedbacks on growth and defense by shaping the rhizosphere microbiota. Nat Commun 9(1):2738. https:\/\/doi.org\/10.1038\/s41467-018-05122-7","journal-title":"Nat Commun"},{"issue":"1","key":"1575_CR43","doi-asserted-by":"publisher","first-page":"236","DOI":"10.1186\/s40168-024-01959-x","volume":"12","author":"L Huang","year":"2024","unstructured":"Huang L, Fan Z, Hu Z, Li Z, Fu Y, Wang Q, Lin X, Feng Y (2024) Synthetic communities derived from the core endophytic microbiome of hyperaccumulators and their role in cadmium phytoremediation. Microbiome 12(1):236. https:\/\/doi.org\/10.1186\/s40168-024-01959-x","journal-title":"Microbiome"},{"key":"1575_CR44","doi-asserted-by":"publisher","first-page":"100140","DOI":"10.1016\/j.stress.2023.100140","volume":"7","author":"S Kalam","year":"2023","unstructured":"Kalam S, Basu A, Podile AR (2023) Insights into plant beneficial microorganism-triggered induced systemic resistance. Plant Stress 7:100140. https:\/\/doi.org\/10.1016\/j.stress.2023.100140","journal-title":"Plant Stress"},{"key":"1575_CR45","doi-asserted-by":"publisher","first-page":"140","DOI":"10.1016\/j.tibtech.2018.11.011","volume":"37","author":"LM Kaminsky","year":"2018","unstructured":"Kaminsky LM, Trexler RV, Malik RJ, Hockett KL, Bell TH (2018) The inherent conflicts in developing soil microbial inoculants. Trends Biotechnol 37:140\u2013151. https:\/\/doi.org\/10.1016\/j.tibtech.2018.11.011","journal-title":"Trends Biotechnol"},{"key":"1575_CR46","doi-asserted-by":"publisher","first-page":"244","DOI":"10.1016\/j.tibtech.2020.07.008","volume":"39","author":"J Ke","year":"2021","unstructured":"Ke J, Wang B, Yoshikuni Y (2021) Microbiome engineering: synthetic biology of plant-associated microbiomes in sustainable agriculture. Trends Biotechnol 39:244\u2013261. https:\/\/doi.org\/10.1016\/j.tibtech.2020.07.008","journal-title":"Trends Biotechnol"},{"key":"1575_CR47","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2018.02732","volume":"9","author":"E Khare","year":"2018","unstructured":"Khare E, Mishra J, Arora NK (2018) Multifaceted interactions between endophytes and plant: developments and prospects. Front Microbiol 9:2732. https:\/\/doi.org\/10.3389\/fmicb.2018.02732","journal-title":"Front Microbiol"},{"issue":"9","key":"1575_CR48","doi-asserted-by":"publisher","first-page":"3168","DOI":"10.1093\/plcell\/koac163","volume":"34","author":"E Korenblum","year":"2022","unstructured":"Korenblum E, Massalha H, Aharoni A (2022) Plant\u2013microbe interactions in the rhizosphere via a circular metabolic economy. Plant Cell 34(9):3168\u20133182. https:\/\/doi.org\/10.1093\/plcell\/koac163","journal-title":"Plant Cell"},{"key":"1575_CR49","doi-asserted-by":"publisher","first-page":"343","DOI":"10.1016\/j.soilbio.2019.05.011","volume":"135","author":"Y Kuzyakov","year":"2019","unstructured":"Kuzyakov Y, Razavi BS (2019) Rhizosphere size and shape: Temporal dynamics and spatial stationarity. Soil Biol Biochem 135:343\u2013360. https:\/\/doi.org\/10.1016\/j.soilbio.2019.05.011","journal-title":"Soil Biol Biochem"},{"issue":"23","key":"1575_CR50","doi-asserted-by":"publisher","first-page":"3303","DOI":"10.3390\/plants11233303","volume":"11","author":"L Lamattina","year":"2022","unstructured":"Lamattina L, Garc\u00eda-Mata C, Graziano M, Pagnussat G (2022) Nitric oxide: the versatility of an extensive signal molecule in plant growth, development and stress responses. Plants 11(23):3303. https:\/\/doi.org\/10.3390\/plants11233303","journal-title":"Plants"},{"key":"1575_CR51","doi-asserted-by":"publisher","first-page":"83","DOI":"10.1007\/s11104-009-0042-x","volume":"321","author":"H Lambers","year":"2009","unstructured":"Lambers H, Mougel C, Jaillard B, Hinsinger P (2009) Plant microbe-soil interactions in the rhizosphere: an evolu tionary perspective. Plant Soil 321:83\u2013115. https:\/\/doi.org\/10.1007\/s11104-009-0042-x","journal-title":"Plant Soil"},{"key":"1575_CR52","doi-asserted-by":"publisher","first-page":"84","DOI":"10.1038\/nature16467","volume":"529","author":"C Lesk","year":"2016","unstructured":"Lesk C, Rowhani P, Ramankutty N (2016) Influence of extreme weather disasters on global crop production. Nature 529:84\u201387. https:\/\/doi.org\/10.1038\/nature16467","journal-title":"Nature"},{"issue":"6","key":"1575_CR53","doi-asserted-by":"publisher","first-page":"616","DOI":"10.1016\/j.tim.2022.12.005","volume":"31","author":"JH Li","year":"2023","unstructured":"Li JH, Aslam M, Gao YY, Dai L, Hao GF, Wei Z, Chen MX, Dini-Andreote F (2023) Microbiome-mediated signal transduction within the plant holobiont. Trends Microbiol 31(6):616\u2013628. https:\/\/doi.org\/10.1016\/j.tim.2022.12.005","journal-title":"Trends Microbiol"},{"issue":"3","key":"1575_CR54","doi-asserted-by":"publisher","first-page":"303","DOI":"10.3390\/genes17030303","volume":"17","author":"S Li","year":"2026","unstructured":"Li S, Chiodi C, Maucieri C, Della Lucia MC, Zardinoni G, Ravi S, Squartini A, Concheri G, Geng G, Wang Y, Stevanato P (2026) Profiling soil\u2013plant\u2013microbial communities: DNA and multi-omics techniques. Genes (Basel) 17(3):303. https:\/\/doi.org\/10.3390\/genes17030303","journal-title":"Genes (Basel)"},{"issue":"9","key":"1575_CR55","doi-asserted-by":"publisher","first-page":"2077","DOI":"10.1038\/ismej.2016.26","volume":"10","author":"SR Lindemann","year":"2016","unstructured":"Lindemann SR, Bernstein HC, Song HS, Fredrickson JK, Fields MW, Shou W, Johnson DR, Beliaev AS (2016) Engineering microbial consortia for controllable outputs. ISME J 10(9):2077\u20132084. https:\/\/doi.org\/10.1038\/ismej.2016.26","journal-title":"ISME J"},{"issue":"1\u20132","key":"1575_CR56","doi-asserted-by":"publisher","first-page":"485","DOI":"10.1007\/s11104-010-0660-3","volume":"341","author":"N Ling","year":"2011","unstructured":"Ling N, Huang Q, Guo S, Shen Q (2011) Paenibacillus polymyxa SQR-21 systemically affects root exudates of watermelon to decrease the conidial germination of Fusarium oxysporum f. sp. niveum. Plant Soil 341(1\u20132):485\u2013493. https:\/\/doi.org\/10.1007\/s11104-010-0660-3","journal-title":"Plant Soil"},{"key":"1575_CR57","doi-asserted-by":"publisher","DOI":"10.1016\/j.crmicr.2024.100322","volume":"8","author":"C Luo","year":"2025","unstructured":"Luo C, He Y, Chen Y (2025) Rhizosphere microbiome regulation: unlocking the potential for plant growth. Curr Res Microb Sci 8:100322. https:\/\/doi.org\/10.1016\/j.crmicr.2024.100322","journal-title":"Curr Res Microb Sci"},{"key":"1575_CR58","doi-asserted-by":"publisher","first-page":"548","DOI":"10.1111\/nph.15738","volume":"223","author":"JP Lynch","year":"2019","unstructured":"Lynch JP (2019) Root phenotypes for improved nutrient cap ture: an underexploited opportunity for global agricul ture. New Phytol 223:548\u2013564. https:\/\/doi.org\/10.1111\/nph.15738","journal-title":"New Phytol"},{"issue":"2","key":"1575_CR59","doi-asserted-by":"publisher","first-page":"97","DOI":"10.3390\/biology10020097","volume":"10","author":"K Mahmud","year":"2021","unstructured":"Mahmud K, Makaju S, Ibrahim R, Missaoui A (2021) Current progress in nitrogen fixing plants and microbiome research toward a more sustainable agriculture. Biology 10(2):97. https:\/\/doi.org\/10.3390\/biology10020097","journal-title":"Biology"},{"key":"1575_CR60","doi-asserted-by":"publisher","first-page":"650609","DOI":"10.3389\/fpls.2021.650609","volume":"12","author":"O Marin","year":"2021","unstructured":"Marin O, Gonz\u00e1lez B, Poupin MJ (2021) From microbial dynamics to functionality in the rhizosphere: a systematic Review of the opportunities with synthetic microbial communities. Front Plant Sci 12:650609. https:\/\/doi.org\/10.3389\/fpls.2021.650609","journal-title":"Front Plant Sci"},{"key":"1575_CR61","doi-asserted-by":"publisher","first-page":"465","DOI":"10.13080\/z-a.2015.102.060","volume":"102","author":"I Miliute","year":"2015","unstructured":"Miliute I, Buzaite O, Baniulis D, Stanys V (2015) Bacterial endophytes in agricultural crops and their role in stress tolerance: a review. Zemdirbyste-Agric 102:465\u2013478. https:\/\/doi.org\/10.13080\/z-a.2015.102.060","journal-title":"Zemdirbyste-Agric"},{"issue":"20","key":"1575_CR62","doi-asserted-by":"publisher","DOI":"10.3390\/cells11203254","volume":"11","author":"AK Mishra","year":"2022","unstructured":"Mishra AK, Sudalaimuthuasari N, Hazzouri KM et al (2022) Tapping into plant\u2013microbiome interactions through the lens of multi-omics techniques. Cells 11(20):3254. https:\/\/doi.org\/10.3390\/cells11203254","journal-title":"Cells"},{"key":"1575_CR63","doi-asserted-by":"publisher","first-page":"1179","DOI":"10.1093\/jxb\/erv557","volume":"67","author":"A Mori","year":"2016","unstructured":"Mori A, Fukuda T, Vejchasarn P, Nestler J, Pariasca-Tanaka J, Wissuwa M (2016) The role of root size versus root efficiency in phosphorus acquisition in rice. J Exp Bot 67:1179\u20131189. https:\/\/doi.org\/10.1093\/jxb\/erv557","journal-title":"J Exp Bot"},{"issue":"1","key":"1575_CR64","doi-asserted-by":"publisher","first-page":"01","DOI":"10.12944\/CARJ.11.1.01","volume":"11","author":"Y Muthusamy","year":"2023","unstructured":"Muthusamy Y, Sengodan K, Arthanari M, Kandhasamy R, Gobianand K (2023) Biofertilizer and consortium development: An updated review. Curr Agric Res J 11(1):01\u201317. https:\/\/doi.org\/10.12944\/CARJ.11.1.01","journal-title":"Curr Agric Res J"},{"issue":"6","key":"1575_CR65","doi-asserted-by":"publisher","first-page":"e0197226","DOI":"10.1371\/journal.pone.0197226","volume":"13","author":"FX Nascimento","year":"2018","unstructured":"Nascimento FX, Rossi MJ, Soares CRFS, McConkey BJ, Glick BR (2018) New insights into 1-aminocyclopropane-1-carboxylate (ACC) deaminase phylogeny, evolution and ecological significance. PLoS ONE 13(6):e0197226. https:\/\/doi.org\/10.1371\/journal.pone.0197226","journal-title":"PLoS ONE"},{"issue":"11","key":"1575_CR66","doi-asserted-by":"publisher","first-page":"1134","DOI":"10.1016\/j.tplants.2022.06.004","volume":"27","author":"L Nerva","year":"2022","unstructured":"Nerva L, Sandrini M, Moffa L, Velasco R, Balestrini R, Chitarra W (2022) Breeding toward improved ecological plant\u2013microbiome interactions. Trends Plant Sci 27(11):1134\u20131147. https:\/\/doi.org\/10.1016\/j.tplants.2022.06.004","journal-title":"Trends Plant Sci"},{"issue":"11","key":"1575_CR67","doi-asserted-by":"publisher","first-page":"4135","DOI":"10.1007\/s00344-024-11377-w","volume":"43","author":"SM Nourashrafeddin","year":"2024","unstructured":"Nourashrafeddin SM, Ramandi A, Seifi A (2024) Xerophyte-derived synthetic bacterial communities enhance maize drought tolerance by increasing plant water use efficiency. J Plant Growth Regul 43(11):4135\u20134150. https:\/\/doi.org\/10.1007\/s00344-024-11377-w","journal-title":"J Plant Growth Regul"},{"key":"1575_CR68","doi-asserted-by":"publisher","first-page":"116","DOI":"10.1016\/j.rhisph.2018.06.004","volume":"6","author":"E Oburger","year":"2018","unstructured":"Oburger E, Jones DL (2018) Sampling root exudates \u2013 mission impossible? Rhizosphere 6:116\u2013133. https:\/\/doi.org\/10.1016\/j.rhisph.2018.06.004","journal-title":"Rhizosphere"},{"key":"1575_CR69","doi-asserted-by":"publisher","first-page":"177","DOI":"10.1007\/s11104-022-05510-3","volume":"478","author":"E Oburger","year":"2022","unstructured":"Oburger E, Schmidt H, Staudinger C (2022) Harnessing belowground processes for sustainable intensification of agricultural systems. Plant Soil 478:177\u2013209. https:\/\/doi.org\/10.1007\/s11104-022-05510-3","journal-title":"Plant Soil"},{"key":"1575_CR70","doi-asserted-by":"publisher","first-page":"956","DOI":"10.3389\/fpls.2019.00956","volume":"10","author":"A Oladzad","year":"2019","unstructured":"Oladzad A, Zitnick-Anderson K, Jain S, Simons K, Osorno JM, McClean PE, Pasche JS (2019) Genotypes and genomic regions associated with Rhizoctonia solani resistance in common bean. Front Plant Sci 10:956. https:\/\/doi.org\/10.3389\/fpls.2019.00956","journal-title":"Front Plant Sci"},{"key":"1575_CR71","doi-asserted-by":"publisher","first-page":"197","DOI":"10.1007\/s11274-017-2364-9","volume":"33","author":"OS Olanrewaju","year":"2017","unstructured":"Olanrewaju OS, Glick BR, Babalola OO (2017) Mechanisms of action of plant growth promoting bacteria. World J Microbiol Biotechnol 33:197. https:\/\/doi.org\/10.1007\/s11274-017-2364-9","journal-title":"World J Microbiol Biotechnol"},{"issue":"3","key":"1575_CR72","doi-asserted-by":"publisher","first-page":"1155","DOI":"10.1007\/s00253-018-9556-6","volume":"103","author":"OS Olanrewaju","year":"2019","unstructured":"Olanrewaju OS, Ayangbenro AS, Glick BR, Babalola OO (2019) Plant health: feedback effect of root exudates-rhizobiome interactions. Appl Microbiol Biotechnol 103(3):1155\u20131166. https:\/\/doi.org\/10.1007\/s00253-018-9556-6","journal-title":"Appl Microbiol Biotechnol"},{"issue":"3","key":"1575_CR73","doi-asserted-by":"publisher","first-page":"621","DOI":"10.1111\/tpj.15194","volume":"106","author":"VCS Pankievicz","year":"2021","unstructured":"Pankievicz VCS, do Amaral FP, Santos KFDN, Agtuca B, Xu Y, Schueller MJ, Arisi ACM, Steffens MBR, de Souza EM, Pedrosa FO, Stacey G (2021) Robust biological nitrogen fixation in a model grass\u2013bacterial association. Plant J 106(3):621\u2013639. https:\/\/doi.org\/10.1111\/tpj.15194","journal-title":"Plant J"},{"key":"1575_CR74","doi-asserted-by":"publisher","first-page":"347","DOI":"10.1146\/annurev-phyto-082712-102340","volume":"52","author":"CMJ Pieterse","year":"2014","unstructured":"Pieterse CMJ, Zamioudis C, Berendsen RL, Weller DM, Van Wees SCM, Bakker PAHM (2014) Induced systemic resistance by beneficial microbes. Annu Rev Phytopathol 52:347\u2013375. https:\/\/doi.org\/10.1146\/annurev-phyto-082712-102340","journal-title":"Annu Rev Phytopathol"},{"issue":"4","key":"1575_CR75","doi-asserted-by":"publisher","first-page":"729","DOI":"10.1111\/tpj.13802","volume":"93","author":"JM Plett","year":"2018","unstructured":"Plett JM, Martin FM (2018) Know your enemy, embrace your friend: Using omics to understand how plants respond differently to pathogenic and mutualistic microorganisms. Plant J 93(4):729\u2013746. https:\/\/doi.org\/10.1111\/tpj.13802","journal-title":"Plant J"},{"issue":"3","key":"1575_CR76","doi-asserted-by":"publisher","DOI":"10.1093\/jambio\/lxad037","volume":"134","author":"EG Poulaki","year":"2023","unstructured":"Poulaki EG, Tjamos SE (2023) Bacillus species: factories of plant protective volatile organic compounds. J Appl Microbiol 134(3):lxad037. https:\/\/doi.org\/10.1093\/jambio\/lxad037","journal-title":"J Appl Microbiol"},{"issue":"6","key":"1575_CR77","doi-asserted-by":"publisher","DOI":"10.1016\/j.biotechadv.2019.03.010","volume":"37","author":"Z Qiu","year":"2019","unstructured":"Qiu Z, Egidi E, Liu H, Kaur S, Singh BK (2019) New frontiers in agriculture productivity: optimised microbial inoculants and in situ microbiome engineering. Biotechnol Adv 37(6):107371. https:\/\/doi.org\/10.1016\/j.biotechadv.2019.03.010","journal-title":"Biotechnol Adv"},{"key":"1575_CR78","doi-asserted-by":"publisher","first-page":"403","DOI":"10.1146\/annurev-phyto-082712-102342","volume":"53","author":"B Reinhold-Hurek","year":"2015","unstructured":"Reinhold-Hurek B, Bunger W, Burbano CS, Sabale M, Hurek T (2015) Roots shaping their microbiome: global hotspots for microbial activity. Annu Rev Phytopathol 53:403\u2013424. https:\/\/doi.org\/10.1146\/annurev-phyto-082712-102342","journal-title":"Annu Rev Phytopathol"},{"key":"1575_CR79","doi-asserted-by":"publisher","first-page":"435","DOI":"10.1016\/j.pbi.2011.04.004","volume":"14","author":"B Rheinhold-Hurek","year":"2011","unstructured":"Rheinhold-Hurek B, Hurek T (2011) Living inside plants: bacterial endophytes. Curr Opin Plant Biol 14:435\u2013443. https:\/\/doi.org\/10.1016\/j.pbi.2011.04.004","journal-title":"Curr Opin Plant Biol"},{"key":"1575_CR80","doi-asserted-by":"publisher","first-page":"e2022239118","DOI":"10.1073\/pnas.20222.39118","volume":"118","author":"JB Ristaino","year":"2021","unstructured":"Ristaino JB, Anderson PK, Bebber DP, Brauman KA, Cun niffe NJ, Fedoroff NV, Finegold C, Garrett KA, Gil ligan CA, Jones CM, Martin MD, MacDonald GK, Neenan P, Records A, Schmale DG, Tateosian L, Wei Q (2021) The persistent threat of emerging plant disease pandemics to global food security. Proc Natl Acad Sci 118:e2022239118. https:\/\/doi.org\/10.1073\/pnas.20222.39118","journal-title":"Proc Natl Acad Sci"},{"key":"1575_CR81","doi-asserted-by":"publisher","first-page":"659","DOI":"10.1007\/s43621-025-01582-2","volume":"6","author":"A Sahoo","year":"2025","unstructured":"Sahoo A, Yadav G, Mehta T et al (2025) Omics-driven insights into plant growth-promoting microorganisms for sustainable agriculture. Discover Sustain 6:659. https:\/\/doi.org\/10.1007\/s43621-025-01582-2","journal-title":"Discover Sustain"},{"key":"1575_CR82","doi-asserted-by":"publisher","first-page":"45","DOI":"10.1016\/j.jare.2021.11.020","volume":"40","author":"G Santoyo","year":"2022","unstructured":"Santoyo G (2022) How plants recruit their microbiome? New insights into beneficial interactions. J Adv Res 40:45\u201358. https:\/\/doi.org\/10.1016\/j.jare.2021.11.020","journal-title":"J Adv Res"},{"issue":"2","key":"1575_CR83","doi-asserted-by":"publisher","DOI":"10.3390\/agronomy11020219","volume":"11","author":"G Santoyo","year":"2021","unstructured":"Santoyo G, Guzm\u00e1n-Guzm\u00e1n P, Parra-Cota FI, Santos-Villalobos SD, Orozco-Mosqueda MDC, Glick BR (2021) Plant growth stimulation by microbial consortia. Agronomy 11(2):219. https:\/\/doi.org\/10.3390\/agronomy11020219","journal-title":"Agronomy"},{"issue":"1","key":"1575_CR84","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1016\/j.tplants.2017.09.003","volume":"23","author":"J Sasse","year":"2018","unstructured":"Sasse J, Martinoia E, Northen T (2018) Feed your friends: do plant exudates shape the root microbiome? Trends Plant Sci 23(1):25\u201341. https:\/\/doi.org\/10.1016\/j.tplants.2017.09.003","journal-title":"Trends Plant Sci"},{"issue":"1","key":"1575_CR85","doi-asserted-by":"publisher","first-page":"146","DOI":"10.1186\/s40168-019-0756-9","volume":"7","author":"JE Schmidt","year":"2019","unstructured":"Schmidt JE, Kent AD, Brisson VL, Gaudin ACM (2019) Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling. Microbiome 7(1):146. https:\/\/doi.org\/10.1186\/s40168-019-0756-9","journal-title":"Microbiome"},{"key":"1575_CR86","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2017.02484","volume":"8","author":"K Schulz-Bohm","year":"2017","unstructured":"Schulz-Bohm K, Mart\u00edn-S\u00e1nchez L, Garbeva P (2017) Microbial volatiles: small molecules with an important role in intra-and inter-kingdom interactions. Front Microbiol 8:2484. https:\/\/doi.org\/10.3389\/fmicb.2017.02484","journal-title":"Front Microbiol"},{"key":"1575_CR87","doi-asserted-by":"publisher","first-page":"506","DOI":"10.1007\/s00284-025-04497-3","volume":"82","author":"M Selladurai","year":"2025","unstructured":"Selladurai M, Panneerselvam S, Rajasekaran R, Nalliappan S, Kailappan A, Rangasamy A (2025) Recent advances in bioinoculant formulations and their shelf-life: A review. Curr Microbiol 82:506. https:\/\/doi.org\/10.1007\/s00284-025-04497-3","journal-title":"Curr Microbiol"},{"issue":"6","key":"1575_CR88","doi-asserted-by":"publisher","first-page":"459","DOI":"10.5423\/PPJ.RW.09.2018.0209","volume":"34","author":"R Sharifi","year":"2018","unstructured":"Sharifi R, Ryu CM (2018) Biogenic volatile compounds for plant disease diagnosis and health improvement. Plant Pathol J 34(6):459. https:\/\/doi.org\/10.5423\/PPJ.RW.09.2018.0209","journal-title":"Plant Pathol J"},{"key":"1575_CR89","doi-asserted-by":"publisher","first-page":"1361388","DOI":"10.3389\/fmicb.2024.1361388","volume":"15","author":"A Sharma","year":"2024","unstructured":"Sharma A, Sharma P, Kumar A, Sharma S, Nair RM, Singh AK (2024) Plant growth-promoting rhizobacteria as biocontrol agents: mechanisms, antimicrobial metabolites, and applications in sustainable agriculture. Front Microbiol 15:1361388. https:\/\/doi.org\/10.3389\/fmicb.2024.1361388","journal-title":"Front Microbiol"},{"issue":"24","key":"1575_CR90","doi-asserted-by":"publisher","DOI":"10.3390\/ijms242417397","volume":"24","author":"J Shumilina","year":"2023","unstructured":"Shumilina J, Soboleva A, Abakumov E, Shtark OY, Zhukov VA, Frolov A (2023) Signaling in legume-rhizobia symbiosis. Int J Mol Sci 24(24):17397. https:\/\/doi.org\/10.3390\/ijms242417397","journal-title":"Int J Mol Sci"},{"key":"1575_CR91","doi-asserted-by":"publisher","unstructured":"Sindhu SS, Parmar P, Phour M, Sehrawat A (2016) Potassium-solubilizing microorganisms (KSMs) and its effect on plant growth improvement. In: Meena VS, Maurya BR, Verma JP, Meena RS (eds) Potassium Solubilizing Microorganisms for Sustainable Agriculture. Springer, New Delhi, pp 171\u2013185. https:\/\/doi.org\/10.1007\/978-81-322-2776-2_13","DOI":"10.1007\/978-81-322-2776-2_13"},{"key":"1575_CR92","doi-asserted-by":"publisher","first-page":"607792","DOI":"10.3389\/fmicb.2021.607792","volume":"12","author":"RK Singh","year":"2021","unstructured":"Singh RK, Singh P, Li HB, Song QQ, Guo DJ, Solanki MK, Verma KK, Malviya MK, Song XP, Lakshmanan P, Yang LT, Li YR (2021) Diversity of nitrogen-fixing rhizobacteria associated with sugarcane: a comprehensive review and prospects for sustainable agriculture. Front Microbiol 12:607792. https:\/\/doi.org\/10.3389\/fmicb.2021.607792","journal-title":"Front Microbiol"},{"issue":"11","key":"1575_CR93","doi-asserted-by":"publisher","DOI":"10.3390\/ijms23116242","volume":"23","author":"RK Singh","year":"2022","unstructured":"Singh RK, Singh P, Sharma A, Guo DJ, Upadhyay SK, Song QQ, Li YR (2022) Unraveling nitrogen fixing potential of endophytic diazotrophs of different Saccharum species for sustainable sugarcane growth. Int J Mol Sci 23(11):6242. https:\/\/doi.org\/10.3390\/ijms23116242","journal-title":"Int J Mol Sci"},{"key":"1575_CR94","doi-asserted-by":"publisher","first-page":"1099999","DOI":"10.3389\/fbioe.2023.1099999","volume":"11","author":"A Singh","year":"2023","unstructured":"Singh A, Yadav VK, Chundawat RS, Soltane R, Awwad NS, Ibrahium HA, Yadav KK, Vicas SI (2023) Enhancing plant growth promoting rhizobacterial activities through consortium exposure: A review. Front Bioeng Biotechnol 11:1099999. https:\/\/doi.org\/10.3389\/fbioe.2023.1099999","journal-title":"Front Bioeng Biotechnol"},{"key":"1575_CR95","doi-asserted-by":"publisher","DOI":"10.3389\/fbioe.2019.00425","volume":"7","author":"A Soumare","year":"2020","unstructured":"Soumare A, Boubekri K, Lyamlouli K, Hafidi M, Ouhdouch Y, Kouisni L (2020) From isolation of phosphate solubilizing microbes to their formulation and use as biofertilizers: status and needs. Front Bioeng Biotechnol 7:425. https:\/\/doi.org\/10.3389\/fbioe.2019.00425","journal-title":"Front Bioeng Biotechnol"},{"issue":"4","key":"1575_CR96","doi-asserted-by":"publisher","first-page":"945","DOI":"10.1016\/j.cj.2020.10.011","volume":"9","author":"R St Aime","year":"2021","unstructured":"St Aime R, Rhodes G, Jones M, Campbell BT, Narayanan S (2021) Evaluation of root traits and water use efficiency of different cotton genotypes in the presence or absence of a soil-hardpan. Crop J 9(4):945\u2013953. https:\/\/doi.org\/10.1016\/j.cj.2020.10.011","journal-title":"Crop J"},{"issue":"22","key":"1575_CR97","doi-asserted-by":"publisher","first-page":"E5213","DOI":"10.1073\/pnas.1722335115","volume":"115","author":"IA Stringlis","year":"2018","unstructured":"Stringlis IA, Yu KE, Feussner K, de Jonge R, Van Bentum S, Van Verk MC, Pieterse CM (2018) MYB72-dependent coumarin exudation shapes root microbiome assembly to promote plant health. Proc Natl Acad Sci 115(22):E5213\u2013E5222. https:\/\/doi.org\/10.1073\/pnas.1722335115","journal-title":"Proc Natl Acad Sci"},{"key":"1575_CR98","doi-asserted-by":"publisher","first-page":"658304","DOI":"10.3389\/fpls.2021.658304","volume":"12","author":"M Taliansky","year":"2021","unstructured":"Taliansky M, Samarskaya V, Zavriev SK, Fesenko I, Kalinina NO, Love AJ, Taliansky M (2021) RNA-based technologies for engineering plant virus resistance and crop protection. Front Plant Sci 12:658304. https:\/\/doi.org\/10.3389\/fpls.2021.658304","journal-title":"Front Plant Sci"},{"issue":"4","key":"1575_CR99","doi-asserted-by":"publisher","first-page":"618","DOI":"10.1105\/tpc.16.00891","volume":"29","author":"D Tang","year":"2017","unstructured":"Tang D, Wang G, Zhou JM (2017) Receptor Kinases in Plant\u2013Pathogen Interactions: More Than Pattern Recognition. Plant Cell 29(4):618\u2013637. https:\/\/doi.org\/10.1105\/tpc.16.00891","journal-title":"Plant Cell"},{"key":"1575_CR100","doi-asserted-by":"publisher","first-page":"607","DOI":"10.1038\/s41579-020-0412-1","volume":"18","author":"P Trivedi","year":"2020","unstructured":"Trivedi P, Leach JE, Tringe SG, Sa T, Singh BK (2020) Plant\u2013microbiome interactions: from community assembly to plant health. Nat Rev Microbiol 18:607\u2013621. https:\/\/doi.org\/10.1038\/s41579-020-0412-1","journal-title":"Nat Rev Microbiol"},{"key":"1575_CR101","doi-asserted-by":"publisher","first-page":"781","DOI":"10.1146\/annurev-arplant","volume":"64","author":"M Udvardi","year":"2013","unstructured":"Udvardi M, Poole PS (2013) Transport and metabolism in legume rhizobia symbioses. Annu Rev Plant Biol 64:781\u2013805. https:\/\/doi.org\/10.1146\/annurev-arplant","journal-title":"Annu Rev Plant Biol"},{"key":"1575_CR102","doi-asserted-by":"publisher","first-page":"117","DOI":"10.1007\/s40003-012-0019-5","volume":"1","author":"A Varma","year":"2012","unstructured":"Varma A, Bakshi M, Lou B, Hartmann A, Oelmueller R (2012) Piriformospora indica: a novel plant growth-promoting mycorrhizal fungus. Agric Res 1:117\u2013131. https:\/\/doi.org\/10.1007\/s40003-012-0019-5","journal-title":"Agric Res"},{"issue":"3","key":"1575_CR103","doi-asserted-by":"publisher","first-page":"187","DOI":"10.1016\/j.tplants.2016.01.005","volume":"21","author":"V Venturi","year":"2016","unstructured":"Venturi V, Keel C (2016) Signaling in the rhizosphere. Trends Plant Sci 21(3):187\u2013198. https:\/\/doi.org\/10.1016\/j.tplants.2016.01.005","journal-title":"Trends Plant Sci"},{"key":"1575_CR104","doi-asserted-by":"publisher","DOI":"10.7717\/peerj.13879","volume":"10","author":"SK Verma","year":"2022","unstructured":"Verma SK, Chen Q, White JF (2022) Evaluation of colonization and mutualistic endophytic symbiosis of Escherichia coli with tomato and Bermuda grass seedlings. PeerJ 10:e13879. https:\/\/doi.org\/10.7717\/peerj.13879","journal-title":"PeerJ"},{"key":"1575_CR105","doi-asserted-by":"publisher","DOI":"10.3389\/fagro.2020.00008","volume":"2","author":"D Vetterlein","year":"2020","unstructured":"Vetterlein D, Carminati A, K\u00f6gel-Knabner I, Bienert GP, Smalla K, Oburger E, Schnepf A, Banitz T, Tarkka MT, Schl\u00fcter S (2020) Rhizosphere spatiotemporal organization\u2013a key to rhizosphere functions. Front Agron 2:8. https:\/\/doi.org\/10.3389\/fagro.2020.00008","journal-title":"Front Agron"},{"issue":"4","key":"1575_CR106","doi-asserted-by":"publisher","first-page":"530","DOI":"10.18805\/ag.R-2348","volume":"44","author":"RS Vidhya Ganesh","year":"2023","unstructured":"Vidhya Ganesh RS, Nithish Kumar M, Kavipriya J, Krishnamoorthy R (2023) Constraints in biofertilizer development and environmental factors influencing its survival in soil: a review. Agric Rev 44(4):530\u2013535. https:\/\/doi.org\/10.18805\/ag.R-2348","journal-title":"Agric Rev"},{"key":"1575_CR107","doi-asserted-by":"publisher","first-page":"403","DOI":"10.1094\/phyto-08-11-0222","volume":"102","author":"DM Weller","year":"2012","unstructured":"Weller DM, Mavrodi DV, van Pelt JA, Pieterse CM, van Loon LC, Bakker PA (2012a) Induced systemic resistance in Arabidopsis thaliana against Pseudomonas syringae pv. tomato by 2, 4-diacetylphloroglucinol-producing Pseudomonas fluorescens. Phytopathology 102:403\u2013412. https:\/\/doi.org\/10.1094\/phyto-08-11-0222","journal-title":"Phytopathology"},{"issue":"4","key":"1575_CR108","doi-asserted-by":"publisher","first-page":"403","DOI":"10.1094\/PHYTO-08-11-0213","volume":"102","author":"DM Weller","year":"2012","unstructured":"Weller DM, Mavrodi DV, van Pelt JA, Pieterse CMJ, van Loon LC, Bakker PAHM (2012b) Induced systemic resistance in Arabidopsis thaliana against Pseudomonas syringae by 2,4-diacetylphloroglucinol-producing Pseudomonas fluorescens. Phytopathology 102(4):403\u2013412. https:\/\/doi.org\/10.1094\/PHYTO-08-11-0213","journal-title":"Phytopathology"},{"issue":"7680","key":"1575_CR109","doi-asserted-by":"publisher","first-page":"313","DOI":"10.1038\/nature24624","volume":"551","author":"M Whiteley","year":"2017","unstructured":"Whiteley M, Diggle SP, Greenberg EP (2017) Progress in and promise of bacterial quorum sensing research. Nature 551(7680):313\u2013320. https:\/\/doi.org\/10.1038\/nature24624","journal-title":"Nature"},{"issue":"6","key":"1575_CR110","doi-asserted-by":"publisher","DOI":"10.3390\/agronomy12061367","volume":"12","author":"M Yasuda","year":"2022","unstructured":"Yasuda M, Dastogeer KMG, Sarkodee-Addo E, Tokiwa C, Isawa T, Shinozaki S, Okazaki S (2022) Impact of Azospirillum sp. B510 on the rhizosphere microbiome of rice under field conditions. Agronomy 12(6):1367. https:\/\/doi.org\/10.3390\/agronomy12061367","journal-title":"Agronomy"},{"issue":"1\u20132","key":"1575_CR111","doi-asserted-by":"publisher","first-page":"87","DOI":"10.1007\/s11104-011-0729-7","volume":"344","author":"N Zhang","year":"2011","unstructured":"Zhang N, Wu K, He X, Li S, Zhang Z, Shen B, Yang X, Zhang R, Huang Q, Shen Q (2011) A new bio-organic fertilizer can effectively control banana wilt by strong colonization with Bacillus subtilis N11. Plant Soil 344(1\u20132):87\u201397. https:\/\/doi.org\/10.1007\/s11104-011-0729-7","journal-title":"Plant Soil"},{"issue":"2","key":"1575_CR112","doi-asserted-by":"publisher","first-page":"258","DOI":"10.1111\/tpj.12723","volume":"81","author":"X Zhang","year":"2021","unstructured":"Zhang X, Dong W, Sun J, Feng F, Deng Y, He Z, Oldroyd GED, Wang E (2021) The Receptor Kinase CERK1 Has Dual Functions in Symbiosis and Immunity Signalling. Plant J 81(2):258\u2013267. https:\/\/doi.org\/10.1111\/tpj.12723","journal-title":"Plant J"},{"issue":"19","key":"1575_CR113","doi-asserted-by":"publisher","first-page":"3752","DOI":"10.1016\/j.jmb.2016.08.003","volume":"428","author":"CP Zschiedrich","year":"2016","unstructured":"Zschiedrich CP, Keidel V, Szurmant H (2016) Molecular mechanisms of two-component signal transduction. J Mol Biol 428(19):3752\u20133775. https:\/\/doi.org\/10.1016\/j.jmb.2016.08.003","journal-title":"J Mol Biol"}],"container-title":["Folia Microbiologica"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s12223-026-01575-2.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s12223-026-01575-2","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s12223-026-01575-2.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,8,28]],"date-time":"2026-08-28T04:00:15Z","timestamp":1787889615000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s12223-026-01575-2"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,8,28]]},"references-count":114,"alternative-id":["1575"],"URL":"https:\/\/doi.org\/10.1007\/s12223-026-01575-2","relation":{},"ISSN":["0015-5632","1874-9356"],"issn-type":[{"value":"0015-5632","type":"print"},{"value":"1874-9356","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,8,28]]},"assertion":[{"value":"19 June 2026","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"13 August 2026","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"28 August 2026","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"Not applicable.","order":1,"name":"Ethics","label":"Ethics, consent to participate","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"Not applicable.","order":2,"name":"Ethics","label":"Consent for publication","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"Not applicable.","order":3,"name":"Ethics","label":"Clinical trial number","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"The authors declare no competing interests.","order":4,"name":"Ethics","label":"Competing interests","group":{"name":"EthicsHeading","label":"Declarations"}}]}}