{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,11,9]],"date-time":"2026-11-09T02:23:16Z","timestamp":1794190996690,"version":"4.8.0"},"reference-count":64,"publisher":"Springer Science and Business Media LLC","issue":"4","license":[{"start":{"date-parts":[[2026,10,12]],"date-time":"2026-10-12T00:00:00Z","timestamp":1791763200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"},{"start":{"date-parts":[[2026,10,12]],"date-time":"2026-10-12T00:00:00Z","timestamp":1791763200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springernature.com\/gp\/researchers\/text-and-data-mining"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["J Appl Genetics"],"published-print":{"date-parts":[[2026,12]]},"DOI":"10.1007\/s13353-026-01118-y","type":"journal-article","created":{"date-parts":[[2026,10,12]],"date-time":"2026-10-12T04:06:07Z","timestamp":1791777967000},"page":"1129-1149","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Genome-wide characterization of histidine kinase genes in Aciculosporium take and their potential roles in cytokinin sensing"],"prefix":"10.1007","volume":"67","author":[{"given":"Yu","family":"Gu","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yingchong","family":"Liao","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sha","family":"Ye","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yan","family":"Tang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Huiru","family":"Meng","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xing","family":"Zhao","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xiaoping","family":"Ma","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2026,10,12]]},"reference":[{"key":"1118_CR1","doi-asserted-by":"publisher","first-page":"824","DOI":"10.1098\/rstb.2023.0369","volume":"435","author":"K Akiyama","year":"2005","unstructured":"Akiyama K, Matsuzaki K-i, Hayashi H (2005) Plant sesquiterpenes induce hyphal branching in arbuscular mycorrhizal fungi. Nature 435:824\u2013827. https:\/\/doi.org\/10.1098\/rstb.2023.0369","journal-title":"Nature"},{"key":"1118_CR2","doi-asserted-by":"publisher","DOI":"10.1016\/j.micres.2022.127103","volume":"262","author":"G Anand","year":"2022","unstructured":"Anand G, Gupta R, Marash I, Leibman-Markus M, Bar M (2022) Cytokinin production and sensing in fungi. Microbiol Res 262:127103. https:\/\/doi.org\/10.1016\/j.micres.2022.127103","journal-title":"Microbiol Res"},{"key":"1118_CR3","doi-asserted-by":"publisher","first-page":"3122","DOI":"10.1091\/mbc.e06-02-0113","volume":"17","author":"YS Bahn","year":"2006","unstructured":"Bahn YS, Kojima K, Cox GM, Heitman J (2006) A unique fungal two-component system regulates stress responses, drug sensitivity, sexual development, and virulence of Cryptococcus neoformans. Mol Biol Cell 17:3122\u20133135. https:\/\/doi.org\/10.1091\/mbc.e06-02-0113","journal-title":"Mol Biol Cell"},{"key":"1118_CR4","doi-asserted-by":"publisher","first-page":"900","DOI":"10.1016\/j.fgb.2010.05.008","volume":"47","author":"O Bayram","year":"2010","unstructured":"Bayram O, Braus GH, Fischer R, Rodriguez-Romero J (2010) Spotlight on Aspergillus nidulans photosensory systems. Fungal Genet Biol 47:900\u2013908. https:\/\/doi.org\/10.1016\/j.fgb.2010.05.008","journal-title":"Fungal Genet Biol"},{"key":"1118_CR5","doi-asserted-by":"publisher","first-page":"131","DOI":"10.1016\/s0092-8674(00)80966-6","volume":"96","author":"AM Bilwes","year":"1999","unstructured":"Bilwes AM, Alex LA, Crane BR, Simon MI (1999) Structure of CheA, a signal-transducing histidine kinase. Cell 96:131\u2013141. https:\/\/doi.org\/10.1016\/s0092-8674(00)80966-6","journal-title":"Cell"},{"key":"1118_CR6","doi-asserted-by":"publisher","first-page":"1833","DOI":"10.1016\/j.cub.2005.08.061","volume":"15","author":"A Blumenstein","year":"2005","unstructured":"Blumenstein A, Vienken K, Tasler R, Purschwitz J, Veith D, Frankenberg-Dinkel N, Fischer R (2005) The Aspergillus nidulans phytochrome FphA represses sexual development in red light. Curr Biol 15:1833\u20131838. https:\/\/doi.org\/10.1016\/j.cub.2005.08.061","journal-title":"Curr Biol"},{"key":"1118_CR7","doi-asserted-by":"publisher","first-page":"1876","DOI":"10.1016\/j.phytochem.2009.05.020","volume":"70","author":"C B\u00f6mke","year":"2009","unstructured":"B\u00f6mke C, Tudzynski B (2009) Diversity, regulation, and evolution of the gibberellin biosynthetic pathway in fungi compared to plants and bacteria. Phytochemistry 70:1876\u20131893. https:\/\/doi.org\/10.1016\/j.phytochem.2009.05.020","journal-title":"Phytochemistry"},{"key":"1118_CR8","doi-asserted-by":"publisher","first-page":"325","DOI":"10.1146\/annurev-micro-092611-150039","volume":"66","author":"EJ Capra","year":"2012","unstructured":"Capra EJ, Laub MT (2012) Evolution of two-component signal transduction systems. Annu Rev Microbiol 66:325\u2013347. https:\/\/doi.org\/10.1146\/annurev-micro-092611-150039","journal-title":"Annu Rev Microbiol"},{"key":"1118_CR9","doi-asserted-by":"publisher","first-page":"3326","DOI":"10.1105\/tpc.114.127605","volume":"26","author":"R Catala","year":"2014","unstructured":"Catala R, Lopez-Cobollo R, Mar Castellano M, Angosto T, Alonso JM, Ecker JR, Salinas J (2014) The Arabidopsis 14-3-3 protein RARE COLD INDUCIBLE 1A links low-temperature response and ethylene biosynthesis to regulate freezing tolerance and cold acclimation. Plant Cell 26:3326\u20133342. https:\/\/doi.org\/10.1105\/tpc.114.127605","journal-title":"Plant Cell"},{"key":"1118_CR10","doi-asserted-by":"publisher","first-page":"1151","DOI":"10.1128\/ec.2.6.1151-1161.2003","volume":"2","author":"NL Catlett","year":"2003","unstructured":"Catlett NL, Yoder OC, Turgeon BG (2003) Whole-genome analysis of two-component signal transduction genes in fungal pathogens. Eukaryot Cell 2:1151\u20131161. https:\/\/doi.org\/10.1128\/ec.2.6.1151-1161.2003","journal-title":"Eukaryot Cell"},{"key":"1118_CR11","doi-asserted-by":"publisher","first-page":"1289","DOI":"10.1111\/mpp.12393","volume":"17","author":"E Chanclud","year":"2016","unstructured":"Chanclud E, Morel J-B (2016) Plant hormones: a fungal point of view. Mol Plant Pathol 17:1289\u20131297. https:\/\/doi.org\/10.1111\/mpp.12393","journal-title":"Mol Plant Pathol"},{"key":"1118_CR12","doi-asserted-by":"publisher","first-page":"435","DOI":"10.1038\/nrmicro1426","volume":"4","author":"N Chauhan","year":"2006","unstructured":"Chauhan N, Latge JP, Calderone R (2006) Signalling and oxidant adaptation in Candida albicans and Aspergillus fumigatus. Nat Rev Microbiol 4:435\u2013444. https:\/\/doi.org\/10.1038\/nrmicro1426","journal-title":"Nat Rev Microbiol"},{"key":"1118_CR13","doi-asserted-by":"publisher","first-page":"1733","DOI":"10.1016\/j.molp.2023.09.010","volume":"16","author":"C Chen","year":"2023","unstructured":"Chen C, Wu Y, Li J, Wang X, Zeng Z, Xu J, Liu Y, Feng J, Chen H, He Y, Xia R (2023) TBtools-II: a \u201cone for all, all for one\u201d bioinformatics platform for biological big-data mining. Mol Plant 16:1733\u20131742. https:\/\/doi.org\/10.1016\/j.molp.2023.09.010","journal-title":"Mol Plant"},{"key":"1118_CR14","doi-asserted-by":"publisher","first-page":"914","DOI":"10.1111\/mmi.12911","volume":"95","author":"TA Defosse","year":"2015","unstructured":"Defosse TA, Sharma A, Mondal AK, Duge de Bernonville T, Latge JP, Calderone R, Giglioli-Guivarc\u2019h N, Courdavault V, Clastre M, Papon N (2015) Hybrid histidine kinases in pathogenic fungi. Mol Microbiol 95:914\u2013924. https:\/\/doi.org\/10.1111\/mmi.12911","journal-title":"Mol Microbiol"},{"key":"1118_CR15","doi-asserted-by":"publisher","first-page":"387","DOI":"10.1104\/pp.16.01964","volume":"174","author":"T Dobisova","year":"2017","unstructured":"Dobisova T, Hrdinova V, Cuesta C, Michlickova S, Urbankova I, Hejatkova R, Zadnikova P, Pernisova M, Benkova E, Hejatko J (2017) Light controls cytokinin signaling via transcriptional regulation of constitutively active sensor histidine kinase CKI1. Plant Physiol 174:387\u2013404. https:\/\/doi.org\/10.1104\/pp.16.01964","journal-title":"Plant Physiol"},{"key":"1118_CR16","doi-asserted-by":"publisher","first-page":"100","DOI":"10.12168\/sjzttx.2023.02.019","volume":"21","author":"PF Feng","year":"2023","unstructured":"Feng PF, Li YM (2023) China\u2019s Bamboo Resources in 2021. World Bamboo and Rattan 21:100\u2013103. https:\/\/doi.org\/10.12168\/sjzttx.2023.02.019","journal-title":"World Bamboo and Rattan"},{"key":"1118_CR17","doi-asserted-by":"publisher","first-page":"11","DOI":"10.1016\/s0378-1097(01)00326-3","volume":"203","author":"MY Galperin","year":"2001","unstructured":"Galperin MY, Nikolskaya AN, Koonin EV (2001) Novel domains of the prokaryotic two-component signal transduction systems. FEMS Microbiol Lett 203:11\u201321. https:\/\/doi.org\/10.1016\/s0378-1097(01)00326-3","journal-title":"FEMS Microbiol Lett"},{"key":"1118_CR18","doi-asserted-by":"publisher","first-page":"133","DOI":"10.1146\/annurev.micro.091208.073214","volume":"63","author":"R Gao","year":"2009","unstructured":"Gao R, Stock AM (2009) Biological insights from structures of two-component proteins. Annu Rev Microbiol 63:133\u2013154. https:\/\/doi.org\/10.1146\/annurev.micro.091208.073214","journal-title":"Annu Rev Microbiol"},{"key":"1118_CR19","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2024.1432979","volume":"15","author":"Y Gu","year":"2024","unstructured":"Gu Y, Yu HY, Kuang JY, Ma XP, Tahir MS, He SA, Liao YC (2024) Genomic insights into bamboo witches\u2019 broom disease: pathogenicity and phytohormone biosynthesis in Aciculosporium take. Front Microbiol 15:1432979. https:\/\/doi.org\/10.3389\/fmicb.2024.1432979","journal-title":"Front Microbiol"},{"key":"1118_CR20","doi-asserted-by":"publisher","first-page":"e0306820","DOI":"10.1128\/mBio.03068-20","volume":"12","author":"R Gupta","year":"2021","unstructured":"Gupta R, Anand G, Pizarro L, Laor D, Kovetz N, Sela N, Yehuda T, Gazit E, Bar M (2021) Cytokinin Inhibits Fungal Development and Virulence by Targeting the Cytoskeleton and Cellular Trafficking. mBio 12:e0306820. https:\/\/doi.org\/10.1128\/mBio.03068-20","journal-title":"mBio"},{"key":"1118_CR21","doi-asserted-by":"publisher","first-page":"1409","DOI":"10.3390\/plants9111409","volume":"9","author":"L He","year":"2020","unstructured":"He L, Zhang F, Wu X, Hu Y, Dong L, Dewitte W, Wen B (2020) Genome-wide characterization and expression of two-component system genes in cytokinin-regulated gall formation in Zizania latifolia. Plants (Basel) 9:1409. https:\/\/doi.org\/10.3390\/plants9111409","journal-title":"Plants (Basel)"},{"key":"1118_CR22","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1005683","volume":"12","author":"A Herivaux","year":"2016","unstructured":"Herivaux A, So YS, Gastebois A, Latge JP, Bouchara JP, Bahn YS, Papon N (2016) Major sensing proteins in pathogenic fungi: the hybrid histidine kinase family. PLoS Pathog 12:e1005683. https:\/\/doi.org\/10.1371\/journal.ppat.1005683","journal-title":"PLoS Pathog"},{"key":"1118_CR23","doi-asserted-by":"publisher","first-page":"297","DOI":"10.1146\/annurev-arplant-080720-093057","volume":"72","author":"XLT Hoang","year":"2021","unstructured":"Hoang XLT, Prerostova S, Thu NBA, Thao NP, Vankova R, Tran LP (2021) Histidine kinases: diverse functions in plant development and responses to environmental conditions. Annu Rev Plant Biol 72:297\u2013323. https:\/\/doi.org\/10.1146\/annurev-arplant-080720-093057","journal-title":"Annu Rev Plant Biol"},{"key":"1118_CR24","doi-asserted-by":"publisher","first-page":"929","DOI":"10.1016\/j.cell.2006.06.058","volume":"126","author":"M Hulko","year":"2006","unstructured":"Hulko M, Berndt F, Gruber M, Linder JU, Truffault V, Schultz A, Martin J, Schultz JE, Lupas AN, Coles M (2006) The HAMP domain structure implies helix rotation in transmembrane signaling. Cell 126:929\u2013940. https:\/\/doi.org\/10.1016\/j.cell.2006.06.058","journal-title":"Cell"},{"key":"1118_CR25","doi-asserted-by":"publisher","DOI":"10.3389\/fpls.2022.1091620","volume":"13","author":"RX Huo","year":"2022","unstructured":"Huo RX, Zhao YS, Liu TX, Xu M, Wang XH, Xu P, Dai SJ, Cui XY, Han YH, Liu ZN, Li ZY (2022) Genome-wide identification and expression analysis of two-component system genes in sweet potato (Ipomoea batatas L.). Front Plant Sci 13:1091620. https:\/\/doi.org\/10.3389\/fpls.2022.1091620","journal-title":"Front Plant Sci"},{"key":"1118_CR26","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.00371-19","volume":"10","author":"O Igbalajobi","year":"2019","unstructured":"Igbalajobi O, Yu Z, Fischer R (2019) Red- and blue-light sensing in the plant pathogen Alternaria alternata depends on phytochrome and the white-collar protein LreA. Mbio 10:e00371-19. https:\/\/doi.org\/10.1128\/mBio.00371-19","journal-title":"Mbio"},{"key":"1118_CR27","doi-asserted-by":"publisher","first-page":"668","DOI":"10.1002\/mbo3.197","volume":"3","author":"S Jacob","year":"2014","unstructured":"Jacob S, Foster AJ, Yemelin A, Thines E (2014) Histidine kinases mediate differentiation, stress response, and pathogenicity in Magnaporthe oryzae. MicrobiolOpen 3:668\u2013687. https:\/\/doi.org\/10.1002\/mbo3.197","journal-title":"MicrobiolOpen"},{"key":"1118_CR28","doi-asserted-by":"publisher","first-page":"273","DOI":"10.1007\/s11046-012-9557-4","volume":"174","author":"Y Ji","year":"2012","unstructured":"Ji Y, Yang F, Ma D, Zhang J, Wan Z, Liu W, Li R (2012) HOG-MAPK signaling regulates the adaptive responses of Aspergillus fumigatus to thermal stress and other related stress. Mycopathologia 174:273\u2013282. https:\/\/doi.org\/10.1007\/s11046-012-9557-4","journal-title":"Mycopathologia"},{"key":"1118_CR29","doi-asserted-by":"publisher","first-page":"2318","DOI":"10.1093\/oxfordjournals.molbev.a004056","volume":"19","author":"T Kasuga","year":"2002","unstructured":"Kasuga T, White TJ, Taylor JW (2002) Estimation of nucleotide substitution rates in Eurotiomycete fungi. Mol Biol Evol 19:2318\u20132324. https:\/\/doi.org\/10.1093\/oxfordjournals.molbev.a004056","journal-title":"Mol Biol Evol"},{"key":"1118_CR30","doi-asserted-by":"publisher","first-page":"539","DOI":"10.1146\/annurev.micro.112408.134054","volume":"64","author":"T Krell","year":"2010","unstructured":"Krell T, Lacal J, Busch A, Silva-Jimenez H, Guazzaroni ME, Ramos JL (2010) Bacterial sensor kinases: diversity in the recognition of environmental signals. Annu Rev Microbiol 64:539\u2013559. https:\/\/doi.org\/10.1146\/annurev.micro.112408.134054","journal-title":"Annu Rev Microbiol"},{"key":"1118_CR31","doi-asserted-by":"publisher","DOI":"10.1016\/j.pestbp.2021.104914","volume":"178","author":"T Li","year":"2021","unstructured":"Li T, Xiu Q, Wang Q, Wang J, Duan Y, Zhou M (2021) Functional dissection of individual domains in group III histidine kinase Sshk1p from the phytopathogenic fungus Sclerotinia sclerotiorum. Pestic Biochem Physiol 178:104914. https:\/\/doi.org\/10.1016\/j.pestbp.2021.104914","journal-title":"Pestic Biochem Physiol"},{"key":"1118_CR32","doi-asserted-by":"publisher","unstructured":"Li ZY, Trinh TL, Li N, Wu JQ, Feng YP, Hao Y (2020) Main bamboo species and their utilization in asia countries. World Bamboo and Rattan 18:1\u20137. https:\/\/doi.org\/10.12168\/sjzttx.2020.04.001","DOI":"10.12168\/sjzttx.2020.04.001"},{"key":"1118_CR33","doi-asserted-by":"publisher","first-page":"379","DOI":"10.1093\/dnares\/dsu004","volume":"21","author":"Z Liu","year":"2014","unstructured":"Liu Z, Zhang M, Kong L, Lv Y, Zou M, Lu G, Cao J, Yu X (2014) Genome-wide identification, phylogeny, duplication, and expression analyses of two-component system genes in Chinese cabbage (Brassica rapa ssp. pekinensis). DNA Res 21:379\u2013396. https:\/\/doi.org\/10.1093\/dnares\/dsu004","journal-title":"DNA Res"},{"key":"1118_CR34","doi-asserted-by":"publisher","first-page":"340","DOI":"10.1038\/s41467-019-13926-4","volume":"11","author":"B Liu","year":"2020","unstructured":"Liu B, Yan J, Li W, Yin L, Li P, Yu H, Xing L, Cai M, Wang H, Zhao M, Zheng J, Sun F, Wang Z, Jiang Z, Ou Q, Li S, Qu L, Zhang Q, Zheng Y, Qiao X, Xi Y, Zhang Y, Jiang F, Huang C, Liu C, Ren Y, Wang S, Liu H, Guo J, Wang H, Dong H, Peng C, Qian W, Fan W, Wan F (2020) Mikania micrantha genome provides insights into the molecular mechanism of rapid growth. Nat Commun 11:340. https:\/\/doi.org\/10.1038\/s41467-019-13926-4","journal-title":"Nat Commun"},{"key":"1118_CR35","doi-asserted-by":"publisher","first-page":"1867","DOI":"10.13346\/j.mycosystema.220142","volume":"41","author":"SY Liu","year":"2022","unstructured":"Liu SY, Yang CL, Zeng Q, Lv YC, Xu XL, Liu LJ, Liu YG (2022) Biological characteristics and fungicidal control efficacy of the pathogens causing witches\u2019 broom of Phyllostachys violascens. Mycosystema 41:1867\u20131888. https:\/\/doi.org\/10.13346\/j.mycosystema.220142","journal-title":"Mycosystema"},{"key":"1118_CR36","doi-asserted-by":"publisher","first-page":"W159","DOI":"10.1093\/nar\/gkac394","volume":"50","author":"Y Liu","year":"2022","unstructured":"Liu Y, Yang X, Gan J, Chen S, Xiao ZX, Cao Y (2022b) CB-Dock2: improved protein-ligand blind docking by integrating cavity detection, docking and homologous template fitting. Nucleic Acids Res 50:W159\u2013W164. https:\/\/doi.org\/10.1093\/nar\/gkac394","journal-title":"Nucleic Acids Res"},{"key":"1118_CR37","doi-asserted-by":"publisher","DOI":"10.1111\/mpp.13464","volume":"25","author":"M Ma","year":"2024","unstructured":"Ma M, Tang L, Sun R, Lyu X, Xie J, Fu Y, Li B, Chen T, Lin Y, Yu X, Chen W, Jiang D, Cheng J (2024) An effector SsCVNH promotes the virulence of Sclerotinia sclerotiorum through targeting class III peroxidase AtPRX71. Mol Plant Pathol 25:e13464. https:\/\/doi.org\/10.1111\/mpp.13464","journal-title":"Mol Plant Pathol"},{"key":"1118_CR38","doi-asserted-by":"publisher","first-page":"975","DOI":"10.1046\/j.1365-2958.2003.03326.x","volume":"47","author":"M Mihlan","year":"2003","unstructured":"Mihlan M, Homann V, Liu T-WD, Tudzynski B (2003) AREA directly mediates nitrogen regulation of gibberellin biosynthesis in Gibberella fujikuroi, but its activity is not affected by NMR. Mol Microbiol 47:975\u2013991. https:\/\/doi.org\/10.1046\/j.1365-2958.2003.03326.x","journal-title":"Mol Microbiol"},{"key":"1118_CR39","doi-asserted-by":"publisher","DOI":"10.1007\/s00294-024-01301-w","volume":"70","author":"S Mina","year":"2024","unstructured":"Mina S, Herivaux A, Yaakoub H, Courdavault V, Wery M, Papon N (2024) Structure and distribution of sensor histidine kinases in the fungal kingdom. Curr Genet 70:17. https:\/\/doi.org\/10.1007\/s00294-024-01301-w","journal-title":"Curr Genet"},{"key":"1118_CR40","doi-asserted-by":"publisher","first-page":"656","DOI":"10.1094\/mpmi-05-23-0056-r","volume":"36","author":"A Monges","year":"2023","unstructured":"Monges A, Yaakoub H, Bidon B, Glevarec G, Hericourt F, Carpin S, Chauderon L, Drasarova L, Spichal L, Binder BM, Papon N, Rochange S (2023) Are Histidine Kinases of Arbuscular Mycorrhizal Fungi Involved in the Response to Ethylene and Cytokinins? Mol Plant Microbe Interact 36:656\u2013665. https:\/\/doi.org\/10.1094\/mpmi-05-23-0056-r","journal-title":"Mol Plant Microbe Interact"},{"key":"1118_CR41","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1002764","volume":"8","author":"B Murrell","year":"2012","unstructured":"Murrell B, Wertheim JO, Moola S, Weighill T, Scheffler K, Kosakovsky Pond SL (2012) Detecting individual sites subject to episodic diversifying selection. PLoS Genet 8:e1002764. https:\/\/doi.org\/10.1371\/journal.pgen.1002764","journal-title":"PLoS Genet"},{"key":"1118_CR42","doi-asserted-by":"publisher","first-page":"1230","DOI":"10.4161\/psb.21516","volume":"7","author":"R Nongpiur","year":"2012","unstructured":"Nongpiur R, Soni P, Karan R, Singla-Pareek SL, Pareek A (2012) Histidine kinases in plants: cross talk between hormone and stress responses. Plant Signal Behav 7:1230\u20131237. https:\/\/doi.org\/10.4161\/psb.21516","journal-title":"Plant Signal Behav"},{"key":"1118_CR43","doi-asserted-by":"publisher","first-page":"4153","DOI":"10.1073\/pnas.0400659101","volume":"101","author":"R Prusty","year":"2004","unstructured":"Prusty R, Grisafi P, Fink GR (2004) The plant hormone indoleacetic acid induces invasive growth in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 101:4153\u20134157. https:\/\/doi.org\/10.1073\/pnas.0400659101","journal-title":"Proc Natl Acad Sci U S A"},{"key":"1118_CR44","doi-asserted-by":"publisher","first-page":"317","DOI":"10.1146\/annurev-phyto-073009-114447","volume":"49","author":"A Robert-Seilaniantz","year":"2011","unstructured":"Robert-Seilaniantz A, Grant M, Jones JDG (2011) Hormone crosstalk in plant disease and defense: more than just jasmonate-salicylate antagonism. Annu Rev Phytopathol 49:317\u2013343. https:\/\/doi.org\/10.1146\/annurev-phyto-073009-114447","journal-title":"Annu Rev Phytopathol"},{"key":"1118_CR45","doi-asserted-by":"publisher","first-page":"423","DOI":"10.1038\/s41586-019-1637-x","volume":"574","author":"LS Ryder","year":"2019","unstructured":"Ryder LS, Dagdas YF, Kershaw MJ, Venkataraman C, Madzvamuse A, Yan X, Cruz-Mireles N, Soanes DM, Oses-Ruiz M, Styles V, Sklenar J, Menke FLH, Talbot NJ (2019) A sensor kinase controls turgor-driven plant infection by the rice blast fungus. Nature 574:423\u2013427. https:\/\/doi.org\/10.1038\/s41586-019-1637-x","journal-title":"Nature"},{"key":"1118_CR46","doi-asserted-by":"publisher","DOI":"10.1071\/fp24055","volume":"51","author":"M Sadaqat","year":"2024","unstructured":"Sadaqat M, Fatima K, Azeem F, Shaheen T, Rahman MU, Ali T, Al-Megrin WAI, Tahir Ul Qamar M (2024) Computational analysis and expression profiling of two-component system (TCS) gene family members in mango (Mangifera indica) indicated their roles in stress response. Funct Plant Biol 51:FP24055. https:\/\/doi.org\/10.1071\/fp24055","journal-title":"Funct Plant Biol"},{"key":"1118_CR47","doi-asserted-by":"publisher","DOI":"10.1007\/s11274-017-2272-z","volume":"33","author":"G Salas-Delgado","year":"2017","unstructured":"Salas-Delgado G, Ongay-Larios L, Kawasaki-Watanabe L, Lopez-Villasenor I, Coria R (2017) The yeasts phosphorelay systems: a comparative view. World J Microbiol Biotechnol 33:111. https:\/\/doi.org\/10.1007\/s11274-017-2272-z","journal-title":"World J Microbiol Biotechnol"},{"key":"1118_CR48","doi-asserted-by":"publisher","first-page":"93","DOI":"10.1007\/s00203-019-01725-w","volume":"202","author":"JA Sanchez-Arreguin","year":"2020","unstructured":"Sanchez-Arreguin JA, Cabrera-Ponce JL, Leon-Ramirez CG, Camargo-Escalante MO, Ruiz-Herrera J (2020) Analysis of the photoreceptors involved in the light-depending basidiocarp formation in Ustilago maydis. Arch Microbiol 202:93\u2013103. https:\/\/doi.org\/10.1007\/s00203-019-01725-w","journal-title":"Arch Microbiol"},{"key":"1118_CR49","doi-asserted-by":"publisher","DOI":"10.1126\/stke.2001.98.re1","volume":"2001","author":"JL Santos","year":"2001","unstructured":"Santos JL, Shiozaki K (2001) Fungal histidine kinases. Sci STKE 2001:re1. https:\/\/doi.org\/10.1126\/stke.2001.98.re1","journal-title":"Sci STKE"},{"key":"1118_CR50","doi-asserted-by":"publisher","first-page":"430","DOI":"10.1186\/1471-2164-9-430","volume":"9","author":"M Schmoll","year":"2008","unstructured":"Schmoll M (2008) The information highways of a biotechnological workhorse-signal transduction in Hypocrea jecorina. BMC Genomics 9:430. https:\/\/doi.org\/10.1186\/1471-2164-9-430","journal-title":"BMC Genomics"},{"key":"1118_CR51","doi-asserted-by":"publisher","first-page":"473","DOI":"10.1080\/12298093.2019.1689037","volume":"47","author":"JH Shin","year":"2019","unstructured":"Shin JH, Gumilang A, Kim MJ, Han JH, Kim KS (2019) A PAS-containing histidine kinase is required for conidiation, appressorium formation, and disease development in the rice blast fungus, Magnaporthe oryzae. Mycobiology 47:473\u2013482. https:\/\/doi.org\/10.1080\/12298093.2019.1689037","journal-title":"Mycobiology"},{"key":"1118_CR52","doi-asserted-by":"publisher","DOI":"10.1128\/mSphere.00818-20","volume":"5","author":"LP Silva","year":"2020","unstructured":"Silva LP, Frawley D, Assis LJ, Tierney C, Fleming AB, Bayram O, Goldman GH (2020) Putative membrane receptors contribute to activation and efficient signaling of mitogen-activated protein kinase cascades during adaptation of Aspergillus fumigatus to different stressors and carbon sources. mSphere 5:e00818-20. https:\/\/doi.org\/10.1128\/mSphere.00818-20","journal-title":"mSphere"},{"key":"1118_CR53","doi-asserted-by":"publisher","first-page":"4829","DOI":"10.1128\/aem.00635-09","volume":"75","author":"E Tanaka","year":"2009","unstructured":"Tanaka E (2009) Specific in situ visualization of the pathogenic endophytic fungus Aciculosporium take, the cause of witches\u2019 broom in bamboo. Appl Environ Microbiol 75:4829\u20134834. https:\/\/doi.org\/10.1128\/aem.00635-09","journal-title":"Appl Environ Microbiol"},{"key":"1118_CR54","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1007\/s10327-002-0002-2","volume":"69","author":"E Tanaka","year":"2003","unstructured":"Tanaka E, Tanaka C, Ishihara A, Kuwahara Y, Tsuda M (2003) Indole-3-acetic acid biosynthesis in Aciculosporium take, a causal agent of witches\u2019 broom of bamboo. J Gen Plant Pathol 69:1\u20136. https:\/\/doi.org\/10.1007\/s10327-002-0002-2","journal-title":"J Gen Plant Pathol"},{"key":"1118_CR55","first-page":"25","volume":"23","author":"M Tsuda","year":"1997","unstructured":"Tsuda M, Shimizu K, Matsumura K, Tanaka E, Tanaka C, Doi Y (1997) Host Range of Aciculosporium take, the Causal Agent of Witches\u2019 Broom of Bamboo Plants. Bull Nat Sci Mus 23:25\u201334","journal-title":"Bull Nat Sci Mus"},{"key":"1118_CR56","doi-asserted-by":"publisher","first-page":"77","DOI":"10.1016\/s1672-0229(10)60008-3","volume":"8","author":"D Wang","year":"2010","unstructured":"Wang D, Zhang Y, Zhang Z, Zhu J, Yu J (2010) KaKs_Calculator 2.0: a toolkit incorporating gamma-series methods and sliding window strategies. Genomics Proteomics Bioinformatics 8:77\u201380. https:\/\/doi.org\/10.1016\/s1672-0229(10)60008-3","journal-title":"Genomics Proteomics Bioinformatics"},{"key":"1118_CR57","doi-asserted-by":"publisher","first-page":"9150","DOI":"10.1021\/ja3041702","volume":"134","author":"KE Wilke","year":"2012","unstructured":"Wilke KE, Francis S, Carlson EE (2012) Activity-based probe for histidine kinase signaling. J Am Chem Soc 134:9150\u20139153. https:\/\/doi.org\/10.1021\/ja3041702","journal-title":"J Am Chem Soc"},{"key":"1118_CR58","doi-asserted-by":"publisher","first-page":"2253","DOI":"10.3390\/ijms19082253","volume":"19","author":"XJ Wu","year":"2018","unstructured":"Wu XJ, Yang H, Sheng Y, Zhu YL, Li PP (2018) Fluorescence properties of a novel cyanobacteriochrome GAF domain from Spirulina that exhibits moderate dark reversion. Int J Mol Sci 19:2253. https:\/\/doi.org\/10.3390\/ijms19082253","journal-title":"Int J Mol Sci"},{"key":"1118_CR59","doi-asserted-by":"publisher","DOI":"10.1186\/s12870-024-05687-0","volume":"24","author":"BL Wu","year":"2024","unstructured":"Wu BL, Sun MY, Zhong T, Zhang JW, Lei TS, Yan YM, Chen XH, Nan R, Sun FL, Zhang C, Xi YJ (2024) Genome-wide identification and expression analysis of two-component system genes in switchgrass (Panicum virgatum L.). BMC Plant Biol 24:1014. https:\/\/doi.org\/10.1186\/s12870-024-05687-0","journal-title":"BMC Plant Biol"},{"key":"1118_CR60","doi-asserted-by":"publisher","DOI":"10.1126\/scisignal.aaz2970","volume":"13","author":"M Xie","year":"2020","unstructured":"Xie M, Wu M, Han A (2020) Structural insights into the signal transduction mechanism of the K(+)-sensing two-component system KdpDE. Sci Signal 13:eaaz2970. https:\/\/doi.org\/10.1126\/scisignal.aaz2970","journal-title":"Sci Signal"},{"key":"1118_CR61","doi-asserted-by":"publisher","first-page":"W420","DOI":"10.1093\/nar\/gkac373","volume":"50","author":"Y Xie","year":"2022","unstructured":"Xie Y, Li H, Luo X, Li H, Gao Q, Zhang L, Teng Y, Zhao Q, Zuo Z, Ren J (2022) IBS 2.0: an upgraded illustrator for the visualization of biological sequences. Nucleic Acids Res 50:W420\u2013W426. https:\/\/doi.org\/10.1093\/nar\/gkac373","journal-title":"Nucleic Acids Res"},{"key":"1118_CR62","doi-asserted-by":"publisher","first-page":"657","DOI":"10.1080\/1040841x.2021.2011834","volume":"48","author":"H Yaakoub","year":"2022","unstructured":"Yaakoub H, Sanchez NS, Ongay-Larios L, Courdavault V, Calenda A, Bouchara JP, Coria R, Papon N (2022) The high osmolarity glycerol (HOG) pathway in fungi. Crit Rev Microbiol 48:657\u2013695. https:\/\/doi.org\/10.1080\/1040841x.2021.2011834","journal-title":"Crit Rev Microbiol"},{"key":"1118_CR63","doi-asserted-by":"publisher","first-page":"209","DOI":"10.1094\/pdis-05-15-0534-pdn","volume":"100","author":"A Yadav","year":"2016","unstructured":"Yadav A, Thorat V, Shouche Y (2016) Candidatus Phytoplasma aurantifolia (16SrII Group) associated with witches\u2019 broom disease of bamboo (Dendrocalamus strictus) in India. Plant Dis 100:209. https:\/\/doi.org\/10.1094\/pdis-05-15-0534-pdn","journal-title":"Plant Dis"},{"key":"1118_CR64","doi-asserted-by":"publisher","first-page":"144","DOI":"10.11833\/j.issn.2095-0756.2011.01.023","volume":"28","author":"YG Yang","year":"2011","unstructured":"Yang YG, Wu XQ (2011) Research progress on pathogens of witches\u2019 broom of bamboo. J Zhejiang A & F Univ 28:144\u2013148. https:\/\/doi.org\/10.11833\/j.issn.2095-0756.2011.01.023","journal-title":"J Zhejiang A & F Univ"}],"container-title":["Journal of Applied Genetics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s13353-026-01118-y.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s13353-026-01118-y","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s13353-026-01118-y.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,11,9]],"date-time":"2026-11-09T01:39:14Z","timestamp":1794188354000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s13353-026-01118-y"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,10,12]]},"references-count":64,"journal-issue":{"issue":"4","published-print":{"date-parts":[[2026,12]]}},"alternative-id":["1118"],"URL":"https:\/\/doi.org\/10.1007\/s13353-026-01118-y","relation":{},"ISSN":["1234-1983","2190-3883"],"issn-type":[{"value":"1234-1983","type":"print"},{"value":"2190-3883","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,10,12]]},"assertion":[{"value":"4 March 2026","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"1 October 2026","order":2,"name":"revised","label":"Revised","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"4 October 2026","order":3,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"12 October 2026","order":4,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"This study does not involve animal testing and therefore does not require ethical review.","order":1,"name":"Ethics","label":"Ethics approval","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"This study does not involve human subjects.","order":2,"name":"Ethics","label":"Consent to participate","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"This study does not involve the publication of personal data.","order":3,"name":"Ethics","label":"Consent to publish","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"The authors have no relevant financial or non-financial interests to disclose.The authors declare no competing interests.","order":4,"name":"Ethics","label":"Competing interests","group":{"name":"EthicsHeading","label":"Declarations"}}]}}