{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,8]],"date-time":"2026-09-08T16:06:51Z","timestamp":1788883611110,"version":"build-2803163510"},"reference-count":37,"publisher":"Springer Science and Business Media LLC","issue":"4","license":[{"start":{"date-parts":[[2020,9,8]],"date-time":"2020-09-08T00:00:00Z","timestamp":1599523200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springer.com\/tdm"},{"start":{"date-parts":[[2020,9,8]],"date-time":"2020-09-08T00:00:00Z","timestamp":1599523200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springer.com\/tdm"}],"funder":[{"DOI":"10.13039\/501100001807","name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","doi-asserted-by":"crossref","award":["2013\/07914-8"],"award-info":[{"award-number":["2013\/07914-8"]}],"id":[{"id":"10.13039\/501100001807","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Braz J Microbiol"],"published-print":{"date-parts":[[2020,12]]},"DOI":"10.1007\/s42770-020-00372-4","type":"journal-article","created":{"date-parts":[[2020,9,7]],"date-time":"2020-09-07T23:05:05Z","timestamp":1599519905000},"page":"2049-2056","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":8,"title":["Highly clonal relationship among Salmonella Enteritidis isolates in a commercial chicken production chain, Brazil"],"prefix":"10.1007","volume":"51","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-3787-1988","authenticated-orcid":false,"given":"Daniel F. M.","family":"Monte","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cristiano","family":"Andrigheto","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Vinicius B.","family":"Ribeiro","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mariza","family":"Landgraf","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Maria Teresa","family":"Destro","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2020,9,8]]},"reference":[{"key":"372_CR1","unstructured":"World Health Organization (WHO) (2018) Salmonella (non-typhoidal). [Accessed 10 Dec 2019]. Available online: https:\/\/www.who.int\/news-room\/fact-sheets\/detail\/salmonella-(non-typhoidal)"},{"key":"372_CR2","doi-asserted-by":"publisher","first-page":"110","DOI":"10.1016\/j.cmi.2015.12.004","volume":"22","author":"P Antunes","year":"2016","unstructured":"Antunes P, Mour\u00e3o J, Campos J, Peixe L (2016) Salmonellosis: the role of poultry meat. Clin Microbiol Infect 22:110\u2013121. https:\/\/doi.org\/10.1016\/j.cmi.2015.12.004","journal-title":"Clin Microbiol Infect"},{"key":"372_CR3","doi-asserted-by":"publisher","first-page":"e00591","DOI":"10.1128\/AEM.00591-19","volume":"85","author":"RG Ferrari","year":"2019","unstructured":"Ferrari RG, Rosario DKA, Cunha-Neto A, Mano SB, Figueiredo EES, Conte-Junior CA (2019) Worldwide epidemiology of Salmonella serovars in animal-based foods: a meta-analysis. Appl Environ Microbiol 85:e00591\u2013e00519. https:\/\/doi.org\/10.1128\/AEM.00591-19","journal-title":"Appl Environ Microbiol"},{"key":"372_CR4","doi-asserted-by":"publisher","first-page":"1026","DOI":"10.1099\/jmm.0.028597-0","volume":"60","author":"LB Kottwitz","year":"2011","unstructured":"Kottwitz LB, Scheffer MC, Dalla-Costa LM, Farah SM, Moscalewski WS, Magnani M, de Oliveira TC (2011) Molecular characterization and resistance profile of Salmonella Enteritidis PT4 and PT9 strains isolated in Brazil. J Med Microbiol 60:1026\u20131031. https:\/\/doi.org\/10.1099\/jmm.0.028597-0","journal-title":"J Med Microbiol"},{"key":"372_CR5","doi-asserted-by":"publisher","first-page":"254","DOI":"10.1016\/j.fm.2012.06.008","volume":"32","author":"F Campioni","year":"2012","unstructured":"Campioni F, Bergamini AM, Falc\u00e3o JP (2012) Genetic diversity, virulence genes and antimicrobial resistance of Salmonella Enteritidis isolated from food and humans over a 24-year period in Brazil. Food Microbiol 32:254\u2013264. https:\/\/doi.org\/10.1016\/j.fm.2012.06.008","journal-title":"Food Microbiol"},{"key":"372_CR6","doi-asserted-by":"publisher","first-page":"422","DOI":"10.1111\/apm.12367","volume":"123","author":"F Campioni","year":"2015","unstructured":"Campioni F, Pitondo-Silva A, Bergamini AM, Falc\u00e3o JP (2015) Comparison of four molecular methods to type Salmonella Enteritidis strains. APMIS 123:422\u2013426. https:\/\/doi.org\/10.1111\/apm.12367","journal-title":"APMIS"},{"key":"372_CR7","doi-asserted-by":"publisher","first-page":"125","DOI":"10.1016\/j.rvsc.2017.02.010","volume":"112","author":"MS Kang","year":"2017","unstructured":"Kang MS, Oh JY, Kwon YK, Lee DY, Jeong OM, Choi BK, Youn SY, Jeon BW, Lee HJ, Lee HS (2017) Public health significance of major genotypes of Salmonella enterica serovar Enteritidis present in both human and chicken isolates in Korea. Res Vet Sci 112:125\u2013131. https:\/\/doi.org\/10.1016\/j.rvsc.2017.02.010","journal-title":"Res Vet Sci"},{"key":"372_CR8","doi-asserted-by":"publisher","first-page":"158","DOI":"10.4315\/0362-028X.JFP-16-299","volume":"80","author":"KA Borges","year":"2017","unstructured":"Borges KA, Furian TQ, de Souza SN, Tondo EC, Streck AF, Salle CT, de Souza Moraes HL, do Nascimento VP (2017) Spread of a major clone of Salmonella enterica serotype Enteritidis in poultry and in salmonellosis outbreaks in southern Brazil. J Food Prot 80:158\u2013163. https:\/\/doi.org\/10.4315\/0362-028X.JFP-16-299","journal-title":"J Food Prot"},{"key":"372_CR9","unstructured":"UBABEF. Brazilian Poultry Association, Annual Report: UBABEF 2014. Available: http:\/\/www.ubabef.com.br\/files\/publicacoes\/8ca705e70f0cb110ae3aed67d29c8842.pdf. Accessed in: 11\/01\/2017"},{"key":"372_CR10","unstructured":"Andrews WH, Jacobson A, Hammack TS (2018) Bacteriological analytical manual (BAM) Chapter 5: Salmonella. Available at: https:\/\/www.fda.gov\/Food\/FoodScienceResearch\/LaboratoryMethods\/ucm070149.htm. Accessed 10 Feb"},{"key":"372_CR11","doi-asserted-by":"publisher","first-page":"291","DOI":"10.1017\/s0950268800067765","volume":"99","author":"LR Ward","year":"1987","unstructured":"Ward LR, de Sa JD, Rowe B (1987) A phage-typing scheme for Salmonella Enteritidis. Epidemiol Infect 99:291\u2013294. https:\/\/doi.org\/10.1017\/s0950268800067765","journal-title":"Epidemiol Infect"},{"key":"372_CR12","unstructured":"Grimont PAD, Weil FX (2007) Antigenic formulae of the Salmonella serovars. Institute Pasteur, Paris, France, Centre Collaborateur OMS de R\u00e9f\u00e9rence et de Recherche pour les Salmonella 9th ed. [166 pp.]"},{"key":"372_CR13","doi-asserted-by":"publisher","first-page":"26","DOI":"10.1016\/j.resmic.2009.10.002","volume":"161","author":"M Guibourdenche","year":"2010","unstructured":"Guibourdenche M, Roggentin P, Mikoleit M, Fields PI, Bockem\u00fchl J, Grimont PA, Weill FX (2010) Supplement 2003-2007 (no. 47) to the White-Kauffmann-Le Minor scheme. Res Microbiol 161:26\u201329. https:\/\/doi.org\/10.1016\/j.resmic.2009.10.002","journal-title":"Res Microbiol"},{"key":"372_CR14","volume-title":"Critically important antimicrobials for human medicine \u2013 5th rev","author":"WHO","year":"2017","unstructured":"WHO (2017) Critically important antimicrobials for human medicine \u2013 5th rev. World Health Organization, Geneva"},{"key":"372_CR15","volume-title":"CLSI supplement M100","author":"Clinical and Laboratory Standards Institute","year":"2019","unstructured":"Clinical and Laboratory Standards Institute (2019) Performance standards for antimicrobial susceptibility testing. In: CLSI supplement M100, 29th edn. Clinical and Laboratory Standards Institute, Wayne","edition":"29"},{"key":"372_CR16","volume-title":"CLSI supplement VET01S","author":"Clinical Laboratory Standards Institute","year":"2015","unstructured":"Clinical Laboratory Standards Institute (2015) Performance standards for antimicrobial disk and dilution susceptibility tests for bacteria isolated from animals. In: CLSI supplement VET01S, 3rd edn. CLSI, Wayne","edition":"3"},{"key":"372_CR17","doi-asserted-by":"publisher","first-page":"870","DOI":"10.1128\/JCM.34.4.870-876.1996","volume":"34","author":"AW Lin","year":"1996","unstructured":"Lin AW, Usera MA, Barret TJ, Goldsby RA (1996) Application of random amplified polymorphic DNA analysis to differentiate strains of Salmonella Enteritidis. J Clin Microbiol 34:870\u2013876","journal-title":"J Clin Microbiol"},{"key":"372_CR18","doi-asserted-by":"publisher","first-page":"2128","DOI":"10.1128\/JCM.32.9.2128-2133.1994","volume":"32","author":"S Pelkonen","year":"1994","unstructured":"Pelkonen S, Romppanem EL, Siitonen A, Pelkonen J (1994) Differentiation of Salmonella serovars Infantis isolates from human and animal sources by fingerprinting IS200 and 16S rrn loci. J Clin Microbiol 32:2128\u20132133","journal-title":"J Clin Microbiol"},{"key":"372_CR19","doi-asserted-by":"publisher","first-page":"2084","DOI":"10.1128\/JCM.30.8.2084-2087.1992","volume":"30","author":"JR Kostman","year":"1992","unstructured":"Kostman JR, Edlind TD, Lipuma JJ, Stull TL (1992) Molecular epidemiology of Pseudomonas cepacia determined by polymerase chain reaction ribotyping. J Clin Microbiol 30:2084\u20132087","journal-title":"J Clin Microbiol"},{"key":"372_CR20","unstructured":"CDC (2017) Standard operating procedure for PulseNet PFGE of Escherichia coli O157:H7, Escherichia coli non-O157 (STEC), Salmonella serotypes, Shigella sonnei and Shigella flexneri. (2017). https:\/\/www.cdc.gov\/pulsenet\/pdf\/ecoli-shigella-salmonella-pfge-protocol-508c.pdf. Accessed 15 Feb 2020"},{"key":"372_CR21","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0220484","volume":"15","author":"T Ball","year":"2020","unstructured":"Ball T, Monte D, Aidara-Kane A, Matheu J, Ru H, Thakur S, Ejobi F, Fedorka-Cray P (2020) International lineages of Salmonella enterica serovars isolated from chicken farms, Wakiso District, Uganda. PLoS One 15:e0220484. https:\/\/doi.org\/10.1371\/journal.pone.0220484","journal-title":"PLoS One"},{"key":"372_CR22","doi-asserted-by":"publisher","first-page":"308","DOI":"10.1111\/j.1472-765X.2012.03298.x","volume":"55","author":"A Zdragas","year":"2012","unstructured":"Zdragas A, Mazaraki K, Vafeas G, Giantzi V, Papadopoulos T, Ekateriniadou L (2012) Prevalence, seasonal occurrence and antimicrobial resistance of Salmonella in poultry retail products in Greece. Lett Appl Microbiol 55:308\u2013313. https:\/\/doi.org\/10.1111\/j.1472-765X.2012.03298.x","journal-title":"Lett Appl Microbiol"},{"key":"372_CR23","doi-asserted-by":"publisher","first-page":"544","DOI":"10.1089\/fpd.2016.2144","volume":"13","author":"SK Lee","year":"2016","unstructured":"Lee SK, Choi D, Kim HS, Kim DH, Seo KH (2016) Prevalence, seasonal occurrence, and antimicrobial resistance of Salmonella spp. isolates recovered from chicken carcasses sampled at major poultry processing plants of South Korea. Foodborne Pathog Dis 13:544\u2013550. https:\/\/doi.org\/10.1089\/fpd.2016.2144","journal-title":"Foodborne Pathog Dis"},{"key":"372_CR24","doi-asserted-by":"publisher","first-page":"2","DOI":"10.1590\/1516-635x160293-96","volume":"16","author":"CP Biffi","year":"2014","unstructured":"Biffi CP, Stefani LM, Miletti LC, Matiello CA, Backes RG, Almeida JM, Neves GB (2014) Phenotypic and genotypic resistance profile of Salmonella Typhimurium to antimicrobials commonly used in poultry. Braz J Poult Sci 16:2\u201396. https:\/\/doi.org\/10.1590\/1516-635x160293-96","journal-title":"Braz J Poult Sci"},{"key":"372_CR25","doi-asserted-by":"publisher","first-page":"299","DOI":"10.3389\/fmicb.2017.00299","volume":"8","author":"BR Pribul","year":"2017","unstructured":"Pribul BR, Festivo ML, Rodrigues MS, Costa RG, Rodrigues EC, de Souza MM, Rodrigues DD (2017) Characteristics of quinolone resistance in Salmonella spp. isolates from the food chain in Brazil. Front Microbiol 8:299. https:\/\/doi.org\/10.3389\/fmicb.2017.00299","journal-title":"Front Microbiol"},{"key":"372_CR26","doi-asserted-by":"publisher","first-page":"1742","DOI":"10.4315\/0362-028X.JFP-17-068","volume":"80","author":"TT Cao","year":"2017","unstructured":"Cao TT, Deng GH, Fang LX, Yang RS, Sun J, Liu YH, Liao XP (2017) Characterization of quinolone resistance in Salmonella enterica from farm animals in China. J Food Prot 80:1742\u20131748. https:\/\/doi.org\/10.4315\/0362-028X.JFP-17-068","journal-title":"J Food Prot"},{"key":"372_CR27","doi-asserted-by":"publisher","first-page":"72","DOI":"10.3389\/fvets.2016.00072","volume":"3","author":"E Morales-Barrera","year":"2016","unstructured":"Morales-Barrera E, Calhoun N, Lobato-Tapia JL, Lucca V, Prado-Rebolledo O, Hernandez-Velasco X, Merino-Guzman R, Petrone-Garc\u00eda VM, Latorre JD, Mahaffey B, Teague KD, Graham LE, Wolfenden AD, Baxter MF, Hargis BM, Tellez G (2016) Risks involved in the use of Enrofloxacin for Salmonella Enteritidis or Salmonella Heidelberg in commercial poultry. Front Vet Sci 3:72. https:\/\/doi.org\/10.3389\/fvets.2016.00072","journal-title":"Front Vet Sci"},{"key":"372_CR28","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/j.vetmic.2016.05.014","volume":"192","author":"Y Chen","year":"2016","unstructured":"Chen Y, Sun J, Liao XP, Shao Y, Li L, Fang LX, Liu YH (2016) Impact of enrofloxacin and florfenicol therapy on the spread of OqxAB gene and intestinal microbiota in chickens. Vet Microbiol 192:1\u20139. https:\/\/doi.org\/10.1016\/j.vetmic.2016.05.014","journal-title":"Vet Microbiol"},{"key":"372_CR29","doi-asserted-by":"publisher","DOI":"10.1111\/hel.12468","volume":"23","author":"L Zhuge","year":"2018","unstructured":"Zhuge L, Wang Y, Wu S, Zhao RL, Li Z, Xie Y (2018) Furazolidone treatment for Helicobacter Pylori infection: a systematic review and meta-analysis. Helicobacter 23:e12468. https:\/\/doi.org\/10.1111\/hel.12468","journal-title":"Helicobacter"},{"key":"372_CR30","doi-asserted-by":"publisher","first-page":"221","DOI":"10.1080\/03079457.2012.667558","volume":"41","author":"PV Makaya","year":"2012","unstructured":"Makaya PV, Matope G, Pfukenyi DM (2012) Distribution of Salmonella serovars and antimicrobial susceptibility of Salmonella Enteritidis from poultry in Zimbabwe. Avian Pathol 41:221\u2013226. https:\/\/doi.org\/10.1080\/03079457.2012.667558","journal-title":"Avian Pathol"},{"key":"372_CR31","doi-asserted-by":"publisher","first-page":"1714","DOI":"10.1128\/aac.46.6.1714-1722.2002","volume":"46","author":"D Boyd","year":"2002","unstructured":"Boyd D, Cloeckaert A, Chaslus-Dancla E, Mulvey MR (2002) Characterization of variant Salmonella genomic island 1 multidrug resistance regions from serovars Typhimurium DT104 and Agona. Antimicrob Agents Chemother 46:1714\u20131722. https:\/\/doi.org\/10.1128\/aac.46.6.1714-1722.2002","journal-title":"Antimicrob Agents Chemother"},{"key":"372_CR32","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1590\/s0036-46652003000100001","volume":"45","author":"LR Dos Santos","year":"2003","unstructured":"Dos Santos LR, do Nascimento VP, de Oliveira SD, Rodrigues DP, dos Reis EM, Seki LM, Ribeiro AR, Fernandes SA (2003) Phage types of Salmonella Enteritidis isolated from clinical and food samples, and from broiler carcasses in southern Brazil. Rev Inst Med Trop Sao Paulo 45:1\u20134. https:\/\/doi.org\/10.1590\/s0036-46652003000100001","journal-title":"Rev Inst Med Trop Sao Paulo"},{"key":"372_CR33","doi-asserted-by":"publisher","first-page":"324","DOI":"10.4315\/0362-028x-66.2.324","volume":"66","author":"IA Nunes","year":"2003","unstructured":"Nunes IA, Helmuth R, Schroeter A, Mead GC, Santos MA, Solari CA, Silva OR, Ferreira AJ (2003) Phage typing of Salmonella enteritidis from different sources in Brazil. J Food Prot 66:324\u2013327. https:\/\/doi.org\/10.4315\/0362-028x-66.2.324","journal-title":"J Food Prot"},{"key":"372_CR34","doi-asserted-by":"publisher","first-page":"59","DOI":"10.1590\/s0036-46652003000200001","volume":"45","author":"SA Fernandes","year":"2003","unstructured":"Fernandes SA, Ghilardi AC, Tavechio AT, Machado AM, Pignatari AC (2003) Phenotypic and molecular characterization of Salmonella Enteritidis strains isolated in S\u00e3o Paulo, Brazil. Rev Inst Med Trop Sao Paulo 45:59\u201363. https:\/\/doi.org\/10.1590\/s0036-46652003000200001","journal-title":"Rev Inst Med Trop Sao Paulo"},{"key":"372_CR35","doi-asserted-by":"publisher","first-page":"179","DOI":"10.1590\/s0036-46652006000400001","volume":"48","author":"SA Fernandes","year":"2006","unstructured":"Fernandes SA, Tavechio AT, Ghilardi AC, Dias AM, Almeida IA, Melo LC (2006) Salmonella serovars isolated from humans in S\u00e3o Paulo State, Brazil, 1996-2003. Rev Inst Med Trop Sao Paulo 48:179\u2013184. https:\/\/doi.org\/10.1590\/s0036-46652006000400001","journal-title":"Rev Inst Med Trop Sao Paulo"},{"key":"372_CR36","doi-asserted-by":"publisher","first-page":"1530","DOI":"10.3382\/ps.2009-00453","volume":"89","author":"CS Vaz","year":"2010","unstructured":"Vaz CS, Streck AF, Michael GB, Marks FS, Rodrigues DP, Dos Reis EM, Cardoso MR, Canal CW (2010) Antimicrobial resistance and subtyping of Salmonella enterica subspecies enterica serovar Enteritidis isolated from human outbreaks and poultry in southern Brazil. Poult Sci 89:1530\u20131536. https:\/\/doi.org\/10.3382\/ps.2009-00453","journal-title":"Poult Sci"},{"key":"372_CR37","doi-asserted-by":"publisher","first-page":"3","DOI":"10.1186\/s41182-017-0043-z","volume":"45","author":"LA Andoh","year":"2017","unstructured":"Andoh LA, Ahmed S, Olsen JE, Obiri-Danso K, Newman MJ, Opintan JA, Barco L, Dalsgaard A (2017) Prevalence and characterization of Salmonella among humans in Ghana. Trop Med Health 45:3. https:\/\/doi.org\/10.1186\/s41182-017-0043-z","journal-title":"Trop Med Health"}],"container-title":["Brazilian Journal of Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s42770-020-00372-4.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s42770-020-00372-4\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s42770-020-00372-4.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,9,7]],"date-time":"2021-09-07T23:12:11Z","timestamp":1631056331000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s42770-020-00372-4"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,9,8]]},"references-count":37,"journal-issue":{"issue":"4","published-print":{"date-parts":[[2020,12]]}},"alternative-id":["372"],"URL":"https:\/\/doi.org\/10.1007\/s42770-020-00372-4","relation":{},"ISSN":["1517-8382","1678-4405"],"issn-type":[{"value":"1517-8382","type":"print"},{"value":"1678-4405","type":"electronic"}],"subject":[],"published":{"date-parts":[[2020,9,8]]},"assertion":[{"value":"19 March 2020","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"29 August 2020","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"8 September 2020","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"The authors declare that they have no conflict of interest.","order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Compliance with ethical standards"}}]}}