{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,29]],"date-time":"2026-04-29T04:25:37Z","timestamp":1777436737555,"version":"3.51.4"},"reference-count":44,"publisher":"Springer Science and Business Media LLC","issue":"3","license":[{"start":{"date-parts":[[2022,5,21]],"date-time":"2022-05-21T00:00:00Z","timestamp":1653091200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springer.com\/tdm"},{"start":{"date-parts":[[2022,5,21]],"date-time":"2022-05-21T00:00:00Z","timestamp":1653091200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springer.com\/tdm"}],"funder":[{"DOI":"10.13039\/501100003593","name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","doi-asserted-by":"publisher","award":["406414\/2016-5"],"award-info":[{"award-number":["406414\/2016-5"]}],"id":[{"id":"10.13039\/501100003593","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100003593","name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","doi-asserted-by":"publisher","award":["166082\/2015-5"],"award-info":[{"award-number":["166082\/2015-5"]}],"id":[{"id":"10.13039\/501100003593","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Braz J Microbiol"],"published-print":{"date-parts":[[2022,9]]},"DOI":"10.1007\/s42770-022-00770-w","type":"journal-article","created":{"date-parts":[[2022,5,21]],"date-time":"2022-05-21T07:02:34Z","timestamp":1653116554000},"page":"1439-1446","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":3,"title":["Fast screening of enteropathogens in marine water samples"],"prefix":"10.1007","volume":"53","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-8804-4347","authenticated-orcid":false,"given":"Carmen Baur","family":"Vieira","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Irene Trigueiros","family":"Ara\u00fajo","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Fernando C\u00e9sar","family":"Ferreira","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jie","family":"Liu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0724-1993","authenticated-orcid":false,"given":"Renato Castiglia","family":"Feitosa","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3470-8093","authenticated-orcid":false,"given":"Marize Pereira","family":"Miagostovich","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2022,5,21]]},"reference":[{"issue":"15","key":"770_CR1","doi-asserted-by":"publisher","first-page":"4325","DOI":"10.1016\/j.watres.2010.06.030","volume":"44","author":"R Girones","year":"2010","unstructured":"Girones R, Ferr\u00fas MA, Alonso JL, Rodriguez-Manzano J, Calgua B, Corr\u00eaa AdeA, Hundesa A, Carratala A, Bofill-Mas S (2010) Molecular detection of pathogens in water - the pros and cons of molecular techniques. Water Res 44(15):4325\u20134339. https:\/\/doi.org\/10.1016\/j.watres.2010.06.030","journal-title":"Water Res"},{"issue":"2","key":"770_CR2","doi-asserted-by":"publisher","first-page":"307","DOI":"10.3390\/pathogens4020307","volume":"4","author":"FY Ram\u00edrez-Castillo","year":"2015","unstructured":"Ram\u00edrez-Castillo FY, Loera-Muro A, Jacques M, Garneau P, Avelar-Gonz\u00e1lez FJ, Harel J, Guerrero-Barrera AL (2015) Waterborne pathogens: detection methods and challenges. Pathogens 4(2):307\u2013334. https:\/\/doi.org\/10.3390\/pathogens4020307","journal-title":"Pathogens"},{"key":"770_CR3","unstructured":"CONAMA - Conselho Nacional do Meio Ambiente\/National Environment Council. Minist\u00e9rio do Meio Ambiente. RESOLU\u00c7\u00c3O CONAMA n\u00ba 274, de 29 de novembro de 2000. DOU no 18, 25 de janeiro de 2001, Se\u00e7\u00e3o 1, p\u00e1ginas 70\u201371"},{"key":"770_CR4","unstructured":"WHO \u2013 World Health Organization (2021) Guidelines on recreational water quality. Volume 1: coastal and fresh waters. World Health Organization, Geneva"},{"issue":"12","key":"770_CR5","doi-asserted-by":"publisher","first-page":"1603","DOI":"10.3390\/pathogens10121603","volume":"10","author":"ES Bailey","year":"2021","unstructured":"Bailey ES, Hopkins M, Casanova L, Sobsey MD (2021) Evaluating fecal indicator and pathogen relationships in sewage impacted surface waters to blend with reclaimed water for potable reuse in North Carolina. Pathogens 10(12):1603. https:\/\/doi.org\/10.3390\/pathogens10121603","journal-title":"Pathogens"},{"key":"770_CR6","doi-asserted-by":"publisher","first-page":"117711","DOI":"10.1016\/j.watres.2021.117711","volume":"206","author":"ML Farrell","year":"2021","unstructured":"Farrell ML, Joyce A, Duane S, Fitzhenry K, Hooban B, Burke LP, Morris D (2021) Evaluating the potential for exposure to organisms of public health concern in naturally occurring bathing waters in Europe: a scoping review. Water Res 206:117711. https:\/\/doi.org\/10.1016\/j.watres.2021.117711","journal-title":"Water Res"},{"issue":"12","key":"770_CR7","doi-asserted-by":"publisher","first-page":"2842","DOI":"10.3390\/ijerph15122842","volume":"15","author":"A Korajkic","year":"2018","unstructured":"Korajkic A, McMinn BR, Harwood VJ (2018) Relationships between microbial indicators and pathogens in recreational water settings. Int J Environ Res Public Health 15(12):2842. https:\/\/doi.org\/10.3390\/ijerph15122842","journal-title":"Int J Environ Res Public Health"},{"key":"770_CR8","doi-asserted-by":"publisher","first-page":"46","DOI":"10.1016\/j.mimet.2017.01.006","volume":"134","author":"E Gonzales-Gustavson","year":"2017","unstructured":"Gonzales-Gustavson E, C\u00e1rdenas-Youngs Y, Calvo M, da Silva MF, Hundesa A, Amor\u00f3s I, Moreno Y, Moreno-Mesonero L, Rosell R, Ganges L, Araujo R, Girones R (2017) Characterization of the efficiency and uncertainty of skimmed milk flocculation for the simultaneous concentration and quantification of water-borne viruses, bacteria and protozoa. J Microbiol Methods 134:46\u201353. https:\/\/doi.org\/10.1016\/j.mimet.2017.01.006","journal-title":"J Microbiol Methods"},{"issue":"2","key":"770_CR9","doi-asserted-by":"publisher","first-page":"472","DOI":"10.1128\/JCM.02658-12","volume":"51","author":"J Liu","year":"2013","unstructured":"Liu J, Gratz J, Amour C, Kibiki G, Becker S, Janaki L, Verweij JJ, Taniuchi M, Sobuz SU, Haque R, Haverstick DM, Houpt ER (2013) A laboratory-developed taqman array card for simultaneous detection of 19 enteropathogens. J Clin Microbiol 51(2):472\u2013480. https:\/\/doi.org\/10.1128\/JCM.02658-12","journal-title":"J Clin Microbiol"},{"issue":"8","key":"770_CR10","doi-asserted-by":"publisher","first-page":"716","DOI":"10.1016\/S1473-3099(14)70808-4","volume":"14","author":"J Liu","year":"2014","unstructured":"Liu J, Kabir F, Manneh J, Lertsethtakarn P, Begum S, Gratz J, Becker SM, Operario DJ, Taniuchi M, Janaki L, Platts-Mills JA, Haverstick DM, Kabir M, Sobuz SU, Nakjarung K, Sakpaisal P, Silapong S, Bodhidatta L, Qureshi S, Kalam A, Saidi Q, Swai N, Mujaga B, Maro A, Kwambana B, Dione M, Antonio M, Kibiki G, Mason CJ, Haque R, Iqbal N, Zaidi AKM, Houpt ER (2014) Development and assessment of molecular diagnostic tests for 15 enteropathogens causing childhood diarrhoea: a multicentre study. Lancet Infect Dis 14(8):716\u2013724. https:\/\/doi.org\/10.1016\/S1473-3099(14)70808-4","journal-title":"Lancet Infect Dis"},{"key":"770_CR11","doi-asserted-by":"publisher","first-page":"100474","DOI":"10.1016\/j.rsma.2018.100474","volume":"25","author":"AS Fries","year":"2019","unstructured":"Fries AS, Coimbra JP, Nemazie DA, Summers RM, Azevedo JPS, Filoso S, Newton M, Gelli G, de Oliveira RCN, Pessoa MAR, Dennison WC (2019) Guanabara Bay ecosystem health report card: science, management, and governance implications. Reg Stu Mar Sci 25:100474. https:\/\/doi.org\/10.1016\/j.rsma.2018.100474","journal-title":"Reg Stu Mar Sci"},{"key":"770_CR12","doi-asserted-by":"publisher","first-page":"1232","DOI":"10.3389\/fmicb.2015.01232","volume":"6","author":"GO Fistarol","year":"2015","unstructured":"Fistarol GO, Coutinho FH, Moreira AP, Venas T, C\u00e1novas A, de Paula SE Jr, Coutinho R, de Moura RL, Valentin JL, Tenenbaum DR, Paranhos R, do Valle RdeA, Vicente AC, Amado Filho GM, Pereira RC, Kruger R, Rezende CE, Thompson CC, Salomon PS, Thompson FL (2015) l and sanitary conditions of Guanabara Bay Rio de Janeiro. Front Microbiol 6:1232. https:\/\/doi.org\/10.3389\/fmicb.2015.01232","journal-title":"Front Microbiol"},{"key":"770_CR13","unstructured":"INEA - Instituto Estadual do Ambiente\/State Environmental Institute\u00a0(2021) Dados Brutos do Monitoramento de Qualidade das \u00c1guas da Ba\u00eda de Guanabara. http:\/\/www.inea.rj.gov.br\/wp-content\/uploads\/2021\/05\/Dados-Brutos-2014-2019.pdf. Accessed 31 March 2022"},{"issue":"1","key":"770_CR14","doi-asserted-by":"publisher","first-page":"120","DOI":"10.1093\/cid\/ciy040","volume":"67","author":"P Lertsethtakarn","year":"2018","unstructured":"Lertsethtakarn P, Silapong S, Sakpaisal P, Serichantalergs O, Ruamsap N, Lurchachaiwong W, Anuras S, Platts-Mills JA, Liu J, Houpt ER, Bodhidatta L, Swierczewski BE, Mason CJ (2018) Travelers\u2019 diarrhea in Thailand: a quantitative analysis using TaqMan\u00ae Array Card. Clin Infect Dis 67(1):120\u2013127. https:\/\/doi.org\/10.1093\/cid\/ciy040","journal-title":"Clin Infect Dis"},{"issue":"12","key":"770_CR15","doi-asserted-by":"publisher","first-page":"e1309","DOI":"10.1016\/S2214-109X(18)30349-8","volume":"6","author":"JA Platts-Mills","year":"2018","unstructured":"Platts-Mills JA, Liu J, Rogawski ET, Kabir F, Lertsethtakarn P, Siguas M, Khan SS, Praharaj I, Murei A, Nshama R, Mujaga B, Havt A, Maciel IA, McMurry TL, Operario DJ, Taniuchi M, Gratz J, Stroup SE, Roberts JH, Kalam A, Aziz F, Qureshi S, Islam MO, Sakpaisal P, Silapong S, Yori PP, Rajendiran R, Benny B, McGrath M, McCormick BJJ, Seidman JC, Lang D, Gottlieb M, Guerrant RL, Lima AAM, Leite JP, Samie A, Bessong PO, Page N, Bodhidatta L, Mason C, Shrestha S, Kiwelu I, Mduma ER, Iqbal NT, Bhutta ZA, Ahmed T, Haque R, Kang G, Kosek MN, Houpt ER, Network Investigators MAL-ED (2018) Use of quantitative molecular diagnostic methods to assess the aetiology, burden, and clinical characteristics of diarrhoea in children in low-resource settings: a reanalysis of the MAL-ED cohort study. Lancet Glob Health 6(12):e1309\u2013e1318. https:\/\/doi.org\/10.1016\/S2214-109X(18)30349-8","journal-title":"Lancet Glob Health"},{"issue":"12","key":"770_CR16","doi-asserted-by":"publisher","first-page":"e1319","DOI":"10.1016\/S2214-109X(18)30351-6","volume":"6","author":"ET Rogawski","year":"2018","unstructured":"Rogawski ET, Liu J, Platts-Mills JA, Kabir F, Lertsethtakarn P, Siguas M, Khan SS, Praharaj I, Murei A, Nshama R, Mujaga B, Havt A, Maciel IA, Operario DJ, Taniuchi M, Gratz J, Stroup SE, Roberts JH, Kalam A, Aziz F, Qureshi S, Islam MO, Sakpaisal P, Silapong S, Yori PP, Rajendiran R, Benny B, McGrath M, Seidman JC, Lang D, Gottlieb M, Guerrant RL, Lima AAM, Leite JP, Samie A, Bessong PO, Page N, Bodhidatta L, Mason C, Shrestha S, Kiwelu I, Mduma ER, Iqbal NT, Bhutta ZA, Ahmed T, Haque R, Kang G, Kosek MN, Houpt ER, Network Investigators MAL-ED (2018) Use of quantitative molecular diagnostic methods to investigate the effect of enteropathogen infections on linear growth in children in low-resource settings: longitudinal analysis of results from the MAL-ED cohort study. Lancet Glob Health 6(12):e1319\u2013e1328. https:\/\/doi.org\/10.1016\/S2214-109X(18)30351-6","journal-title":"Lancet Glob Health"},{"key":"770_CR17","unstructured":"IBGE \u2013 Instituto Brasileiro de Geografia e Estat\u00edstica\/Brazilian Institute of Geography and Statistics (2021) Rio de Janeiro. https:\/\/www.ibge.gov.br\/cidades-e-estados\/rj\/rio-de-janeiro.html?. Accessed 08 October 2021"},{"key":"770_CR18","doi-asserted-by":"publisher","first-page":"319","DOI":"10.1016\/j.rsma.2016.01.009","volume":"8","author":"A Soares-Gomes","year":"2016","unstructured":"Soares-Gomes A, da Gama BAP, Baptista Neto JA, Freire DG, Cordeiro RC, Machado W, Bernardes MC, Coutinho R, Thompson FL, Pereira RC (2016) An environmental overview of Guanabara Bay, Rio de Janeiro. Reg Stu Mar Sci 8:319\u2013330. https:\/\/doi.org\/10.1016\/j.rsma.2016.01.009","journal-title":"Reg Stu Mar Sci"},{"issue":"2","key":"770_CR19","doi-asserted-by":"publisher","first-page":"79","DOI":"10.1016\/j.jviromet.2008.08.003","volume":"153","author":"B Calgua","year":"2008","unstructured":"Calgua B, Mengewein A, Grunert A, Bofill-Mas S, Clemente-Casares P, Hundesa A, Wyn-Jones AP, L\u00f3pez-Pila JM, Girones R (2008) Development and application of a one-step low cost procedure to concentrate viruses from seawater samples. J Virol Methods 153(2):79\u201383. https:\/\/doi.org\/10.1016\/j.jviromet.2008.08.003","journal-title":"J Virol Methods"},{"issue":"6","key":"770_CR20","doi-asserted-by":"publisher","first-page":"e297","DOI":"10.1016\/S2542-5196(21)00051-6.ErratuminLancetPlanetHealth.2021Jun;5(6):e336","volume":"5","author":"R Lappan","year":"2021","unstructured":"Lappan R, Henry R, Chown SL, Luby SP, Higginson EE, Bata L, Jirapanjawat T, Schang C, Openshaw JJ, O\u2019Toole J, Lin A, Tela A, Turagabeci A, Wong THF, French MA, Brown RR, Leder K, Greening C, McCarthy D (2021) Monitoring of diverse enteric pathogens across environmental and host reservoirs with TaqMan array cards and standard qPCR: a methodological comparison study. Lancet Planet Health 5(6):e297\u2013e308. https:\/\/doi.org\/10.1016\/S2542-5196(21)00051-6.ErratuminLancetPlanetHealth.2021Jun;5(6):e336","journal-title":"Lancet Planet Health"},{"issue":"18","key":"770_CR21","doi-asserted-by":"publisher","first-page":"10263","DOI":"10.1021\/acs.est.8b01528","volume":"52","author":"KK Baker","year":"2018","unstructured":"Baker KK, Senesac R, Sewell D, Sen Gupta A, Cumming O, Mumma J (2018) Fecal fingerprints of enteric pathogen contamination in public environments of Kisumu, Kenya, associated with human sanitation conditions and domestic animals. Environ Sci Technol 52(18):10263\u201310274. https:\/\/doi.org\/10.1021\/acs.est.8b01528","journal-title":"Environ Sci Technol"},{"issue":"1","key":"770_CR22","doi-asserted-by":"publisher","first-page":"1170","DOI":"10.1007\/s11356-020-10479-8","volume":"28","author":"LDG Pedrosa de Macena","year":"2021","unstructured":"Pedrosa de Macena LDG, Castiglia Feitosa R, Vieira CB, Ara\u00fajo IT, Taniuchi M, Miagostovich MP (2021) Microbiological assessment of an urban lagoon system in the coastal zone of Rio de Janeiro. Brazil Environ Sci Pollut Res Int 28(1):1170\u20131180. https:\/\/doi.org\/10.1007\/s11356-020-10479-8","journal-title":"Brazil Environ Sci Pollut Res Int"},{"key":"770_CR23","unstructured":"Pitkanen T, Hanninen M-L (2017) Members of the family Campylobacteraceae:\u00a0Campylobacter jejuni,\u00a0Campylobacter coli. In Rose JB, Jim\u00e9nez-Cisneros B (eds) Water and sanitation for the 21st century: health and microbiological aspects of excreta and wastewater management (Global Water Pathogen Project), 1st edn. Michigan\u00a0State University, E. Lansing, MI, UNESCO. http:\/\/www.waterpathogens.org\/book\/campylobacter. Accessed 08 October 2021"},{"issue":"2","key":"770_CR24","doi-asserted-by":"publisher","first-page":"214","DOI":"10.1016\/j.rvsc.2009.08.005","volume":"88","author":"MH Aquino","year":"2010","unstructured":"Aquino MH, Filgueiras AL, Matos R, Santos KR, Ferreira T, Ferreira MC, Teixeira LM, Tibana A (2010) Diversity of Campylobacter jejuni and Campylobacter coli genotypes from human and animal sources from Rio de Janeiro. Brazil Res Vet Sci 88(2):214\u2013217. https:\/\/doi.org\/10.1016\/j.rvsc.2009.08.005","journal-title":"Brazil Res Vet Sci"},{"issue":"1","key":"770_CR25","doi-asserted-by":"publisher","first-page":"80","DOI":"10.1099\/jmm.0.000201","volume":"65","author":"CN Gomes","year":"2016","unstructured":"Gomes CN, Souza RA, Passaglia J, Duque SS, Medeiros MIC, Falc\u00e3o JP (2016) Genotyping of Campylobacter coli strains isolated in Brazil suggests possible contamination amongst environmental, human, animal and food sources. J Med Microbiol 65(1):80\u201390. https:\/\/doi.org\/10.1099\/jmm.0.000201","journal-title":"J Med Microbiol"},{"issue":"2","key":"770_CR26","doi-asserted-by":"publisher","first-page":"220","DOI":"10.1093\/infdis\/jix294.Erratum.In:JInfectDis.2017216(8):1048","volume":"216","author":"DJ Operario","year":"2017","unstructured":"Operario DJ, Platts-Mills JA, Nadan S, Page N, Seheri M, Mphahlele J, Praharaj I, Kang G, Araujo IT, Leite JPG, Cowley D, Thomas S, Kirkwood CD, Dennis F, Armah G, Mwenda JM, Wijesinghe PR, Rey G, Grabovac V, Berejena C, Simwaka CJ, Uwimana J, Sherchand JB, Thu HM, Galagoda G, Bonkoungou IJO, Jagne S, Tsolenyanu E, Diop A, Enweronu-Laryea C, Borbor SA, Liu J, McMurry T, Lopman B, Parashar U, Gentsch J, Steele AD, Cohen A, Serhan F, Houpt ER (2017) Etiology of severe acute watery diarrhea in children in the global rotavirus surveillance network using quantitative polymerase chain reaction. J Infect Dis 216(2):220\u2013227. https:\/\/doi.org\/10.1093\/infdis\/jix294.Erratum.In:JInfectDis.2017216(8):1048","journal-title":"J Infect Dis"},{"issue":"12","key":"770_CR27","doi-asserted-by":"publisher","first-page":"2205","DOI":"10.3390\/ijerph16122205","volume":"16","author":"MO Chukwu","year":"2019","unstructured":"Chukwu MO, Luther King Abia A, Ubomba-Jaswa E, Obi L, Dewar JB (2019) Characterization and phylogenetic analysis of campylobacter species isolated from paediatric stool and water samples in the Northwest Province, South Africa. Int J Environ Res Public Health 16(12):2205. https:\/\/doi.org\/10.3390\/ijerph16122205","journal-title":"Int J Environ Res Public Health"},{"issue":"1","key":"770_CR28","doi-asserted-by":"publisher","first-page":"80","DOI":"10.1186\/s12866-017-0991-9","volume":"17","author":"B Szczepanska","year":"2017","unstructured":"Szczepanska B, Andrzejewska M, Spica D, Klawe JJ (2017) Prevalence and antimicrobial resistance of Campylobacter jejuni and Campylobacter coli isolated from children and environmental sources in urban and suburban areas. BMC Microbiol 17(1):80. https:\/\/doi.org\/10.1186\/s12866-017-0991-9","journal-title":"BMC Microbiol"},{"issue":"1","key":"770_CR29","doi-asserted-by":"publisher","first-page":"53","DOI":"10.1007\/s10482-009-9335-6","volume":"96","author":"MC Castilho","year":"2009","unstructured":"Castilho MC, Castro TL, Ara\u00fajo VS, Trajano RS, Santos PA, Pimenta PM, Lucheze K, Melo JT, Gon\u00e7alves AM, Nogueira RT, de Luna MG, Freitas-Almeida AC (2009) High frequency of hemolytic and cytotoxic activity in Aeromonas spp. isolated from clinical, food and environmental in Rio de Janeiro Brazil. Antonie Van Leeuwenhoek 96(1):53\u201361. https:\/\/doi.org\/10.1007\/s10482-009-9335-6","journal-title":"Antonie Van Leeuwenhoek"},{"key":"770_CR30","unstructured":"Momba M, Azab El-Liethy M (2017) vibrio cholerae and cholera biotypes. In Rose JB, Jim\u00e9nez-Cisneros B (eds) Water and sanitation for the 21st century: health and microbiological aspects of excreta and wastewater management (global water pathogen project), 1st edn. Michigan\u00a0State University, E. Lansing, MI, UNESCO. https:\/\/www.waterpathogens.org\/book\/Vibrio. Accessed 31 March 2022"},{"key":"770_CR31","unstructured":"Brasil, Minist\u00e9rio da Sa\u00fade\/ Ministry of Health (2021) C\u00f3lera: causas, sintomas, transmiss\u00e3o, tratamento e diagn\u00f3stico. https:\/\/www.gov.br\/saude\/pt-br\/assuntos\/saude-de-a-a-z\/c\/colera\/colera.\u00a0Accessed 31 March 2022"},{"key":"770_CR32","doi-asserted-by":"crossref","unstructured":"Aw T (2018) Environmental aspects and features of critical pathogen groups. In Rose JB, Jim\u00e9nez-Cisneros B (eds) Water and sanitation for the 21st century: health and microbiological aspects of excreta and wastewater management (global water pathogen project), 1st edn. Michigan\u00a0State University, E. Lansing, MI, UNESCO. http:\/\/www.waterpathogens.org\/book\/environmental-aspects-and-features-of-critical-pathogen-groups. Accessed 08 October 2021","DOI":"10.14321\/waterpathogens.2"},{"key":"770_CR33","doi-asserted-by":"publisher","first-page":"96","DOI":"10.1016\/j.watres.2017.06.042","volume":"123","author":"A Efstratiou","year":"2017","unstructured":"Efstratiou A, Ongerth J, Karanis P (2017) Evolution of monitoring for giardia and cryptosporidium in water. Water Res 123:96\u2013112. https:\/\/doi.org\/10.1016\/j.watres.2017.06.042","journal-title":"Water Res"},{"issue":"3","key":"770_CR34","doi-asserted-by":"publisher","first-page":"e0193860","DOI":"10.1371\/journal.pone.0193860","volume":"13","author":"CV Barbosa","year":"2018","unstructured":"Barbosa CV, Barreto MM, Andrade RJ, Sodr\u00e9 F, d\u2019Avila-Levy CM, Peralta JM, Igreja RP, de Macedo HW, Santos HLC (2018) Intestinal parasite infections in a rural community of Rio de Janeiro (Brazil): prevalence and genetic diversity of Blastocystis subtypes. PLoS ONE 13(3):e0193860. https:\/\/doi.org\/10.1371\/journal.pone.0193860","journal-title":"PLoS ONE"},{"issue":"3","key":"770_CR35","doi-asserted-by":"publisher","first-page":"346","DOI":"10.1590\/s0037-86822007000300020","volume":"40","author":"FA Carvalho-Costa","year":"2007","unstructured":"Carvalho-Costa FA, Gon\u00e7alves AQ, Lassance SL, de Albuquerque CP, Leite JP, B\u00f3ia MN (2007) Detection of Cryptosporidium spp and other intestinal parasites in children with acute diarrhea and severe dehydration in Rio de Janeiro. Rev Soc Bras Med Trop 40(3):346\u2013348. https:\/\/doi.org\/10.1590\/s0037-86822007000300020","journal-title":"Rev Soc Bras Med Trop"},{"key":"770_CR36","doi-asserted-by":"publisher","first-page":"17","DOI":"10.1051\/parasite\/2021028","volume":"28","author":"A Dos Santos Zanetti","year":"2021","unstructured":"Dos Santos Zanetti A, Malheiros AF, de Matos TA, Dos Santos C, Battaglini PF, Moreira LM, Lemos LMS, Castrillon SKI, da Costa BoamorteCortela D, Ignotti E, Espinosa OA (2021) Diversity, geographical distribution, and prevalence of Entamoeba spp in Brazil: a systematic review and meta-analysis. Parasite 28:17. https:\/\/doi.org\/10.1051\/parasite\/2021028","journal-title":"Parasite"},{"key":"770_CR37","doi-asserted-by":"publisher","first-page":"308","DOI":"10.1016\/j.watres.2016.03.042","volume":"96","author":"E Rames","year":"2016","unstructured":"Rames E, Roiko A, Stratton H, Macdonald J (2016) Technical aspects of using human adenovirus as a viral water quality indicator. Water Res 96:308\u2013326. https:\/\/doi.org\/10.1016\/j.watres.2016.03.042","journal-title":"Water Res"},{"key":"770_CR38","doi-asserted-by":"publisher","first-page":"240","DOI":"10.1016\/j.marpolbul.2018.05.031","volume":"133","author":"J Dias","year":"2018","unstructured":"Dias J, Pinto RN, Vieira CB, de Abreu CA (2018) Detection and quantification of human adenovirus (HAdV), JC polyomavirus (JCPyV) and hepatitis A virus (HAV) in recreational waters of Niter\u00f3i, Rio de Janeiro, Brazil. Mar Pollut Bull 133:240\u2013245. https:\/\/doi.org\/10.1016\/j.marpolbul.2018.05.031","journal-title":"Mar Pollut Bull"},{"key":"770_CR39","doi-asserted-by":"publisher","first-page":"304","DOI":"10.1016\/j.scitotenv.2017.01.223","volume":"586","author":"R Staggemeier","year":"2017","unstructured":"Staggemeier R, Heck TMS, Demoliner M, Ritzel RGF, R\u00f6hnelt NMS, Girardi V, Venker CA, Spilki FR (2017) Enteric viruses and adenovirus diversity in waters from 2016 Olympic venues. Sci Total Environ 586:304\u2013312. https:\/\/doi.org\/10.1016\/j.scitotenv.2017.01.223","journal-title":"Sci Total Environ"},{"issue":"4","key":"770_CR40","doi-asserted-by":"publisher","first-page":"1210","DOI":"10.1111\/jam.12592","volume":"117","author":"M Victoria","year":"2014","unstructured":"Victoria M, Fumian TM, Rocha MS, Dalmao F, Leite JP, Girones R, Miagostovich MP (2014) Gastroenteric virus dissemination and influence of rainfall events in urban beaches in Brazil. J Appl Microbiol 117(4):1210\u20131218. https:\/\/doi.org\/10.1111\/jam.12592","journal-title":"J Appl Microbiol"},{"issue":"1","key":"770_CR41","doi-asserted-by":"publisher","first-page":"110","DOI":"10.2166\/wh.2012.123","volume":"11","author":"TM Fumian","year":"2013","unstructured":"Fumian TM, Vieira CB, Leite JP, Miagostovich MP (2013) Assessment of burden of virus agents in an urban sewage treatment plant in Rio de Janeiro. Brazil J Water Health 11(1):110\u2013119. https:\/\/doi.org\/10.2166\/wh.2012.123","journal-title":"Brazil J Water Health"},{"issue":"8","key":"770_CR42","doi-asserted-by":"publisher","first-page":"e0183196","DOI":"10.1371\/journal.pone.0183196","volume":"12","author":"S Portes","year":"2017","unstructured":"Portes S, Carvalho-Costa FA, Rocha MS, Fumian TM, Maranh\u00e3o AG, de Assis RM, Xavier M, Rocha MS, Miagostovich MP, Leite J, Volot\u00e3o EM (2017) Enteric viruses in HIV-1 seropositive and HIV-1 seronegative children with diarrheal diseases in Brazil. PLoS ONE 12(8):e0183196. https:\/\/doi.org\/10.1371\/journal.pone.0183196","journal-title":"PLoS ONE"},{"issue":"8","key":"770_CR43","doi-asserted-by":"publisher","first-page":"e0135687","DOI":"10.1371\/journal.pone.0135687","volume":"10","author":"P Xavier Mda","year":"2015","unstructured":"Xavier Mda P, Carvalho Costa FA, Rocha MS, Andrade Jda S, Diniz FK, Andrade TR, Miagostovich MP, Leite JP, Volot\u00e3o Ede M (2015) Surveillance of human astrovirus infection in Brazil: the first report of MLB1 Astrovirus. PLoS ONE 10(8):e0135687. https:\/\/doi.org\/10.1371\/journal.pone.0135687","journal-title":"PLoS ONE"},{"key":"770_CR44","volume-title":"Baia de Guanabara: Uma Hist\u00f3ria de Agress\u00e3o Ambiental","author":"V Coelho","year":"2007","unstructured":"Coelho V (2007) Baia de Guanabara: Uma Hist\u00f3ria de Agress\u00e3o Ambiental. Casa Da Palavra, Rio de Janeiro"}],"container-title":["Brazilian Journal of Microbiology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s42770-022-00770-w.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1007\/s42770-022-00770-w\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1007\/s42770-022-00770-w.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,8,31]],"date-time":"2022-08-31T10:12:14Z","timestamp":1661940734000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1007\/s42770-022-00770-w"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2022,5,21]]},"references-count":44,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2022,9]]}},"alternative-id":["770"],"URL":"https:\/\/doi.org\/10.1007\/s42770-022-00770-w","relation":{},"ISSN":["1517-8382","1678-4405"],"issn-type":[{"value":"1517-8382","type":"print"},{"value":"1678-4405","type":"electronic"}],"subject":[],"published":{"date-parts":[[2022,5,21]]},"assertion":[{"value":"8 October 2021","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"10 May 2022","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"21 May 2022","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"Not applicable.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Ethics approval"}},{"value":"Not applicable.","order":3,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent to participate"}},{"value":"Not applicable.","order":4,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent for publication"}},{"value":"The authors declare no competing interests.","order":5,"name":"Ethics","group":{"name":"EthicsHeading","label":"Conflicts of interest"}}]}}