{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,9,15]],"date-time":"2024-09-15T14:19:55Z","timestamp":1726409995163},"publisher-location":"Berlin, Heidelberg","reference-count":10,"publisher":"Springer Berlin Heidelberg","isbn-type":[{"type":"print","value":"9783642132131"},{"type":"electronic","value":"9783642132148"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2010]]},"DOI":"10.1007\/978-3-642-13214-8_24","type":"book-chapter","created":{"date-parts":[[2010,5,19]],"date-time":"2010-05-19T03:48:39Z","timestamp":1274240919000},"page":"181-191","source":"Crossref","is-referenced-by-count":0,"title":["e-BiMotif: Combining Sequence Alignment and Biclustering to Unravel Structured Motifs"],"prefix":"10.1007","author":[{"given":"Joana P.","family":"Gon\u00e7alves","sequence":"first","affiliation":[]},{"given":"Sara C.","family":"Madeira","sequence":"additional","affiliation":[]}],"member":"297","reference":[{"issue":"2","key":"24_CR1","doi-asserted-by":"publisher","first-page":"225","DOI":"10.1089\/10665270252935430","volume":"9","author":"J. Buhler","year":"2002","unstructured":"Buhler, J., Tompa, M.: Finding motifs using random projections. Journal of Computational Biology\u00a09(2), 225\u2013242 (2002)","journal-title":"Journal of Computational Biology"},{"issue":"2","key":"24_CR2","doi-asserted-by":"publisher","first-page":"126","DOI":"10.1109\/TCBB.2006.16","volume":"3","author":"A. Carvalho","year":"2006","unstructured":"Carvalho, A., Freitas, A., Oliveira, A., Sagot, M.F.: An efficient algorithm for the identification of structured motifs in DNA promoter sequences. IEEE\/ACM Transactions on Computational Biology and Bioinformatics\u00a03(2), 126\u2013140 (2006)","journal-title":"IEEE\/ACM Transactions on Computational Biology and Bioinformatics"},{"issue":"Sup. I","key":"24_CR3","doi-asserted-by":"crossref","first-page":"354","DOI":"10.1093\/bioinformatics\/18.suppl_1.S354","volume":"18","author":"E. Eskin","year":"2002","unstructured":"Eskin, E., Pevzner, P.: Finding composite regulatory patterns in DNA sequences. Bioinformatics\u00a018(Sup. I), S354\u2013S363 (2002)","journal-title":"Bioinformatics"},{"key":"24_CR4","doi-asserted-by":"publisher","first-page":"8","DOI":"10.1186\/1748-7188-4-8","volume":"4","author":"S. Madeira","year":"2009","unstructured":"Madeira, S., Oliveira, A.: An efficient biclustering algorithm for finding genes with similar patterns in time-series expression data. Algorithms in Molecular Biology\u00a04, 8 (2009)","journal-title":"Algorithms in Molecular Biology"},{"key":"24_CR5","doi-asserted-by":"publisher","first-page":"345","DOI":"10.1089\/106652700750050826","volume":"7","author":"L. Marsan","year":"2000","unstructured":"Marsan, L., Sagot, M.F.: Extracting structured motifs using a suffix tree - algorithms and application to promoter consensus identification. Journal of Computational Biology\u00a07, 345\u2013354 (2000)","journal-title":"Journal of Computational Biology"},{"issue":"24","key":"24_CR6","doi-asserted-by":"publisher","first-page":"2996","DOI":"10.1093\/bioinformatics\/btl537","volume":"22","author":"N. Mendes","year":"2006","unstructured":"Mendes, N., Casimiro, A., Santos, P., S\u00e1-Correia, I., Oliveira, A., Freitas, A.: MUSA: a parameter free algorithm for the identification of biologically significant motifs. Bioinformatics\u00a022(24), 2996\u20133002 (2006)","journal-title":"Bioinformatics"},{"issue":"9","key":"24_CR7","doi-asserted-by":"publisher","first-page":"1122","DOI":"10.1093\/bioinformatics\/btl060","volume":"22","author":"A. Prelic\u0300","year":"2006","unstructured":"Prelic\u0300, A., Bleuler, S., Zimmermann, P., Wille, A., B\u00fchlmann, P., Gruissem, W., Hennig, L., Thiele, L., Zitzler, E.: A systematic comparison and evaluation of biclustering methods for gene expression data. Bioinformatics\u00a022(9), 1122\u20131129 (2006)","journal-title":"Bioinformatics"},{"issue":"7","key":"24_CR8","doi-asserted-by":"publisher","first-page":"608","DOI":"10.1093\/bioinformatics\/17.7.608","volume":"17","author":"D. Thakurta","year":"2001","unstructured":"Thakurta, D., Stormo, G.: Identifying target sites for cooperatively binding factors. Bioinformatics\u00a017(7), 608\u2013621 (2001)","journal-title":"Bioinformatics"},{"issue":"24","key":"24_CR9","doi-asserted-by":"publisher","first-page":"3289","DOI":"10.1093\/bioinformatics\/btm485","volume":"23","author":"S. Wang","year":"2007","unstructured":"Wang, S., Gutell, R., Miranker, P.: Biclustering as a method for RNA local multiple sequence alignment. Bioinformatics\u00a023(24), 3289\u20133296 (2007)","journal-title":"Bioinformatics"},{"issue":"21","key":"24_CR10","first-page":"126","volume":"1","author":"Y. Zhang","year":"2006","unstructured":"Zhang, Y., Zaki, M.: EXMOTIF: efficient structured motif extraction. Algorithms for Molecular Biology\u00a01(21), 126\u2013140 (2006)","journal-title":"Algorithms for Molecular Biology"}],"container-title":["Advances in Intelligent and Soft Computing","Advances in Bioinformatics"],"original-title":[],"link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/978-3-642-13214-8_24.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,4,30]],"date-time":"2021-04-30T11:58:11Z","timestamp":1619783891000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/978-3-642-13214-8_24"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2010]]},"ISBN":["9783642132131","9783642132148"],"references-count":10,"URL":"https:\/\/doi.org\/10.1007\/978-3-642-13214-8_24","relation":{},"ISSN":["1867-5662","1867-5670"],"issn-type":[{"type":"print","value":"1867-5662"},{"type":"electronic","value":"1867-5670"}],"subject":[],"published":{"date-parts":[[2010]]}}}