{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,7]],"date-time":"2026-04-07T00:57:55Z","timestamp":1775523475979,"version":"3.50.1"},"reference-count":24,"publisher":"Springer Science and Business Media LLC","issue":"2","license":[{"start":{"date-parts":[[2017,1,10]],"date-time":"2017-01-10T00:00:00Z","timestamp":1484006400000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0"}],"funder":[{"name":"Eddie Bauer Grant for Expeditions"},{"name":"Marie Curie fellowship","award":["FP7-299320"],"award-info":[{"award-number":["FP7-299320"]}]},{"DOI":"10.13039\/501100002428","name":"Austrian Science Fund","doi-asserted-by":"publisher","award":["M1363-B20"],"award-info":[{"award-number":["M1363-B20"]}],"id":[{"id":"10.13039\/501100002428","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Coral Reefs"],"published-print":{"date-parts":[[2017,6]]},"DOI":"10.1007\/s00338-016-1517-x","type":"journal-article","created":{"date-parts":[[2017,1,10]],"date-time":"2017-01-10T06:00:49Z","timestamp":1484028049000},"page":"447-452","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":36,"title":["Microbiome variation in corals with distinct depth distribution ranges across a shallow\u2013mesophotic gradient (15\u201385\u00a0m)"],"prefix":"10.1007","volume":"36","author":[{"given":"Bettina","family":"Glasl","sequence":"first","affiliation":[]},{"given":"Pim","family":"Bongaerts","sequence":"additional","affiliation":[]},{"given":"Nathalie H.","family":"Elisabeth","sequence":"additional","affiliation":[]},{"given":"Ove","family":"Hoegh-Guldberg","sequence":"additional","affiliation":[]},{"given":"Gerhard J.","family":"Herndl","sequence":"additional","affiliation":[]},{"given":"Pedro R.","family":"Frade","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2017,1,10]]},"reference":[{"key":"1517_CR1","doi-asserted-by":"crossref","first-page":"683","DOI":"10.1111\/j.1461-0248.2006.00926.x","volume":"9","author":"MJ Anderson","year":"2006","unstructured":"Anderson MJ, Ellingsen KE, McArdle BH (2006) Multivariate dispersion as a measure of beta diversity. Ecol Lett 9:683\u2013693","journal-title":"Ecol Lett"},{"key":"1517_CR2","doi-asserted-by":"crossref","first-page":"2261","DOI":"10.1038\/ismej.2015.39","volume":"9","author":"TD Ainsworth","year":"2015","unstructured":"Ainsworth TD, Krause L, Bridge T, Torda G, Raina J-B, Zakrzewski M, Gates RD, Padilla-Gamino JL, Spalding HL, Smith C, Woolsey ES, Bourne DG, Bongaerts P, Hoegh-Guldberg O, Leggat W (2015) The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts. ISME J 9:2261\u20132274","journal-title":"ISME J"},{"key":"1517_CR3","first-page":"3","volume":"4","author":"RPM Bak","year":"1977","unstructured":"Bak RPM (1977) Coral reefs and their zonation in Netherlands Antilles: modern and ancient reefs. Studies in Geology 4:3\u201316","journal-title":"Studies in Geology"},{"key":"1517_CR4","doi-asserted-by":"crossref","first-page":"309","DOI":"10.1007\/s00338-009-0581-x","volume":"29","author":"P Bongaerts","year":"2010","unstructured":"Bongaerts P, Ridgway T, Sampayo EM, Hoegh-Guldberg O (2010) Assessing the \u2018deep reef refugia\u2019 hypothesis: focus on Caribbean reefs. Coral Reefs 29:309\u2013327","journal-title":"Coral Reefs"},{"key":"1517_CR5","doi-asserted-by":"crossref","first-page":"140297","DOI":"10.1098\/rsos.140297","volume":"2","author":"P Bongaerts","year":"2015","unstructured":"Bongaerts P, Carmichael M, Hay KB, Tonk L, Frade PR, Hoegh-Guldberg O (2015a) Prevalent endosymbiont zonation shapes the depth distributions of scleractinian coral species. R Soc Open Sci 2:140297","journal-title":"R Soc Open Sci"},{"key":"1517_CR6","doi-asserted-by":"crossref","first-page":"7652","DOI":"10.1038\/srep07652","volume":"5","author":"P Bongaerts","year":"2015","unstructured":"Bongaerts P, Frade PR, Hay KB, Englebert N, Latijnhouwers KRW, Bak RPM, Vermeij MJA, Hoegh-Guldberg O (2015b) Deep down on a Caribbean reef: lower mesophotic depths harbor a specialized coral-endosymbiont community. Sci Rep 5:7652","journal-title":"Sci Rep"},{"key":"1517_CR7","doi-asserted-by":"crossref","first-page":"425","DOI":"10.1038\/nmeth.1990","volume":"9","author":"L Bragg","year":"2012","unstructured":"Bragg L, Stone G, Imelfort M, Hugenholtz P, Tyson GW (2012) Fast, accurate error-correction of amplicon pyrosequences using Acacia. Nat Methods 9:425\u2013426","journal-title":"Nat Methods"},{"key":"1517_CR8","doi-asserted-by":"crossref","first-page":"266","DOI":"10.1093\/bioinformatics\/btp636","volume":"26","author":"JC Caporaso","year":"2010","unstructured":"Caporaso JC, Bittinger K, Bushman FD, DeSantis TZ, Andersen GL, Knight R (2010a) PyNAST: a flexible tool for aligning sequences to a template alignment. Bioinformatics 26:266\u2013267","journal-title":"Bioinformatics"},{"key":"1517_CR9","doi-asserted-by":"crossref","first-page":"335","DOI":"10.1038\/nmeth.f.303","volume":"7","author":"JG Caporaso","year":"2010","unstructured":"Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Pena AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, Lozupone CA, McDonald D, Muegge BD, Pirrung M, Reeder J, Sevinsky JR, Turnbaugh PJ, Walters WA, Widmann J, Yatsunenko T, Zaneveld J, Knight R (2010b) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7:335\u2013336","journal-title":"Nat Methods"},{"key":"1517_CR10","doi-asserted-by":"crossref","first-page":"1624","DOI":"10.1038\/srep01624","volume":"3","author":"C Carlos","year":"2013","unstructured":"Carlos C, Torres TT, Ottoboni LMM (2013) Bacterial communities and species-specific associations with the mucus of Brazilian coral species. Sci Rep 3:1624","journal-title":"Sci Rep"},{"key":"1517_CR11","doi-asserted-by":"crossref","first-page":"3566","DOI":"10.1890\/08-1823.1","volume":"90","author":"M C\u00e1ceres De","year":"2009","unstructured":"De C\u00e1ceres M, Legendre P (2009) Associations between species and groups of sites: indices and statistical inference. Ecology 90:3566\u20133574","journal-title":"Ecology"},{"key":"1517_CR12","doi-asserted-by":"crossref","first-page":"2460","DOI":"10.1093\/bioinformatics\/btq461","volume":"26","author":"RC Edgar","year":"2010","unstructured":"Edgar RC (2010) Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26:2460\u20132461","journal-title":"Bioinformatics"},{"key":"1517_CR13","doi-asserted-by":"crossref","first-page":"2280","DOI":"10.1038\/ismej.2016.9","volume":"10","author":"B Glasl","year":"2016","unstructured":"Glasl B, Herndl GJ, Frade PR (2016) The microbiome of coral surface mucus has a key role in mediating holobiont health and survival upon disturbance. ISME J 10:2280\u20132292","journal-title":"ISME J"},{"key":"1517_CR14","doi-asserted-by":"crossref","first-page":"247","DOI":"10.1007\/s00338-010-0614-5","volume":"29","author":"LM Hinderstein","year":"2010","unstructured":"Hinderstein LM, Marr JCA, Martinez FA, Dowgiallo MJ, Puglise KA, Pyle RL, Zawada DG, Appeldoorn R (2010) Theme section on \u201cMesophotic coral ecosystems: characterization, ecology, and management\u201d. Coral Reefs 29:247\u2013251","journal-title":"Coral Reefs"},{"key":"1517_CR15","doi-asserted-by":"crossref","first-page":"255","DOI":"10.1007\/s00338-010-0593-6","volume":"29","author":"SE Kahng","year":"2010","unstructured":"Kahng SE, Garcia-Sais JR, Spalding HL, Brokovich E, Wagner D, Weil E, Hinderstein L, Toonen RJ (2010) Community ecology of mesophotic coral reef ecosystems. Coral Reefs 29:255\u2013275","journal-title":"Coral Reefs"},{"key":"1517_CR16","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1016\/j.jembe.2009.05.009","volume":"374","author":"MP Lesser","year":"2009","unstructured":"Lesser MP, Slattery M, Leichter JJ (2009) Ecology of mesophotic coral reefs. J Exp Mar Bio Ecol 374:1\u20138","journal-title":"J Exp Mar Bio Ecol"},{"key":"1517_CR17","doi-asserted-by":"crossref","first-page":"143","DOI":"10.3354\/meps07008","volume":"346","author":"MP Lesser","year":"2007","unstructured":"Lesser MP, Falc\u00f3n LI, Rodr\u00edguez-Rom\u00e1n A, Enr\u00edquez S, Hoegh-Guldberg O, Iglesias-Prieto R (2007) Nitrogen fixation by symbiotic cyanobacteria provides a source of nitrogen for the scleractinian coral Montastraea cavernosa. Mar Ecol Prog Ser 346:143\u2013152","journal-title":"Mar Ecol Prog Ser"},{"key":"1517_CR18","doi-asserted-by":"crossref","first-page":"17","DOI":"10.1111\/j.1574-6941.2010.00862.x","volume":"73","author":"JB Olson","year":"2010","unstructured":"Olson JB, Kellogg CA (2010) Microbial ecology of corals, sponges, and algae in mesophotic coral environments. FEMS Microbiol Ecol 73:17\u201330","journal-title":"FEMS Microbiol Ecol"},{"key":"1517_CR19","doi-asserted-by":"crossref","first-page":"1916","DOI":"10.1038\/ismej.2015.3","volume":"9","author":"O Pantos","year":"2015","unstructured":"Pantos O, Bongaerts P, Dennis PG, Tyson GW, Hoegh-Guldberg O (2015) Habitat-specific environmental conditions primarily control the microbiomes of the coral Seriatopora hystrix. ISME J 9:1916\u20131927","journal-title":"ISME J"},{"key":"1517_CR20","unstructured":"R Development Core Team (2008) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria"},{"key":"1517_CR21","doi-asserted-by":"crossref","first-page":"1","DOI":"10.3354\/meps243001","volume":"243","author":"F Rohwer","year":"2002","unstructured":"Rohwer F, Seguritan V, Azam F, Knowlton N (2002) Diversity and distribution of coral-associated bacteria. Mar Ecol Prog Ser 243:1\u201310","journal-title":"Mar Ecol Prog Ser"},{"key":"1517_CR22","doi-asserted-by":"crossref","first-page":"1045","DOI":"10.1128\/JB.01379-09","volume":"192","author":"S Schmitz-Esser","year":"2010","unstructured":"Schmitz-Esser S, Tischler P, Arnold R, Montanaro J, Wagner M, Rattei T, Horn M (2010) The genome of the amoeba symbiont \u201cCandidatus Amoebophilus asiaticus\u201d reveals common mechanisms for host cell interaction among amoeba-associated bacteria. J Bacteriol 192:1045\u20131057","journal-title":"J Bacteriol"},{"key":"1517_CR23","doi-asserted-by":"crossref","first-page":"176","DOI":"10.3389\/fcimb.2014.00176","volume":"4","author":"JR Thompson","year":"2015","unstructured":"Thompson JR, Rivera HE, Closek CJ, Medina M (2015) Microbes in the coral holobiont: partners through evolution, development, and ecological interactions. Front Cell Infect Microbiol 4:176","journal-title":"Front Cell Infect Microbiol"},{"key":"1517_CR24","doi-asserted-by":"crossref","first-page":"5261","DOI":"10.1128\/AEM.00062-07","volume":"73","author":"Q Wang","year":"2007","unstructured":"Wang Q, Garritz GM, Tiedje JM, Cole JR (2007) Na\u00efve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Envrion Microbiol 73:5261\u20135267","journal-title":"Appl Envrion Microbiol"}],"container-title":["Coral Reefs"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s00338-016-1517-x.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1007\/s00338-016-1517-x\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1007\/s00338-016-1517-x.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2017,5,16]],"date-time":"2017-05-16T05:31:21Z","timestamp":1494912681000},"score":1,"resource":{"primary":{"URL":"http:\/\/link.springer.com\/10.1007\/s00338-016-1517-x"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,1,10]]},"references-count":24,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2017,6]]}},"alternative-id":["1517"],"URL":"https:\/\/doi.org\/10.1007\/s00338-016-1517-x","relation":{},"ISSN":["0722-4028","1432-0975"],"issn-type":[{"value":"0722-4028","type":"print"},{"value":"1432-0975","type":"electronic"}],"subject":[],"published":{"date-parts":[[2017,1,10]]}}}