{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,21]],"date-time":"2026-05-21T11:51:43Z","timestamp":1779364303069,"version":"3.53.0"},"reference-count":81,"publisher":"Elsevier","isbn-type":[{"value":"9780121827779","type":"print"}],"license":[{"start":{"date-parts":[[2003,1,1]],"date-time":"2003-01-01T00:00:00Z","timestamp":1041379200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2003]]},"DOI":"10.1016\/s0076-6879(03)74020-8","type":"book-chapter","created":{"date-parts":[[2004,5,19]],"date-time":"2004-05-19T00:21:00Z","timestamp":1084926060000},"page":"461-491","source":"Crossref","is-referenced-by-count":1487,"title":["Modeller: Generation and Refinement of Homology-Based Protein Structure Models"],"prefix":"10.1016","author":[{"given":"Andr\u00e1s","family":"Fiser","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andrej","family":"\u0160ali","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0001","doi-asserted-by":"crossref","first-page":"65","DOI":"10.1016\/0022-2836(69)90487-2","volume":"42","author":"Browne","year":"1969","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0002","doi-asserted-by":"crossref","first-page":"347","DOI":"10.1038\/326347a0","volume":"326","author":"Blundell","year":"1987","journal-title":"Nature"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0003","doi-asserted-by":"crossref","first-page":"1798","DOI":"10.1002\/pro.5560021103","volume":"2","author":"Bajorath","year":"1994","journal-title":"Protein Sci."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0004","doi-asserted-by":"crossref","first-page":"1","DOI":"10.3109\/10409239409086797","volume":"29","author":"Johnson","year":"1994","journal-title":"CRC Crit. Rev. Biochem. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0005","doi-asserted-by":"crossref","first-page":"206","DOI":"10.1016\/S0959-440X(97)80027-9","volume":"7","author":"S\u00e1nchez","year":"1997","journal-title":"Curr. Opin. Struct. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0006","doi-asserted-by":"crossref","first-page":"291","DOI":"10.1146\/annurev.biophys.29.1.291","volume":"29","author":"Mart\u00ed-Renom","year":"2000","journal-title":"Annu. Rev. Biophys. Biomol. Struct."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0007","series-title":"\u201cComputational Biochemistry and Biophysics\u201d","first-page":"275","author":"Fiser","year":"2000"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0008","doi-asserted-by":"crossref","first-page":"39","DOI":"10.1038\/35011000","volume":"405","author":"Baker","year":"2000","journal-title":"Nature"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0009","doi-asserted-by":"crossref","first-page":"225","DOI":"10.1016\/0022-2836(80)90373-3","volume":"136","author":"Lesk","year":"1980","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0010","doi-asserted-by":"crossref","first-page":"986","DOI":"10.1038\/80776","volume":"7","author":"S\u00e1nchez","year":"2000","journal-title":"Nat. Struct. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0011","doi-asserted-by":"crossref","first-page":"227","DOI":"10.1093\/protein\/14.4.227","volume":"14","author":"Jennings","year":"2001","journal-title":"Protein Eng."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0012","doi-asserted-by":"crossref","first-page":"12","DOI":"10.1093\/nar\/27.1.12","volume":"27","author":"Benson","year":"1999","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0013","doi-asserted-by":"crossref","first-page":"49","DOI":"10.1093\/nar\/27.1.49","volume":"27","author":"Bairoch","year":"1999","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0014","doi-asserted-by":"crossref","first-page":"235","DOI":"10.1093\/nar\/28.1.235","volume":"28","author":"Berman","year":"2000","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0015","doi-asserted-by":"crossref","first-page":"543","DOI":"10.1038\/357543a0","volume":"360","author":"Chothia","year":"1992","journal-title":"Nature"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0016","doi-asserted-by":"crossref","first-page":"254","DOI":"10.1093\/nar\/27.1.254","volume":"27","author":"Hubbard","year":"1999","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0017","doi-asserted-by":"crossref","first-page":"244","DOI":"10.1093\/nar\/27.1.244","volume":"27","author":"Holm","year":"1999","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0018","doi-asserted-by":"crossref","first-page":"153","DOI":"10.1093\/protein\/13.3.153","volume":"13","author":"Bray","year":"2000","journal-title":"Protein Eng."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0019","doi-asserted-by":"crossref","first-page":"595","DOI":"10.1126\/science.273.5275.595","volume":"273","author":"Holm","year":"1996","journal-title":"Science"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0020","doi-asserted-by":"crossref","first-page":"151","DOI":"10.1038\/13783","volume":"23","author":"Burley","year":"1999","journal-title":"Nat. Genet."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0021","year":"2000","journal-title":"Nat. Struct. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0022","unstructured":"U. Pieper, N. Eswar, H. Braberga, M. S. Madhusudhan, F. Davis, A. C. Stuart, N. Mirkovic, A. Rossi, M. A. Marti-Renom, A. Fiser, B. Webb, D. Greenblatt, C. Huang, T. Fernn, and A. \u0160ali, Nucl. Acids. Res., in press."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0079","doi-asserted-by":"crossref","first-page":"3375","DOI":"10.1093\/nar\/gkg543","volume":"81","author":"Eswar","year":"2003","journal-title":"Nucl. Acids Res."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0080","doi-asserted-by":"crossref","first-page":"779","DOI":"10.1006\/jmbi.1993.1626","volume":"234","author":"\u0160ali","year":"1993","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0023","doi-asserted-by":"crossref","first-page":"1582","DOI":"10.1002\/pro.5560030923","volume":"3","author":"\u0160ali","year":"1994","journal-title":"Protein Sci."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0024","doi-asserted-by":"crossref","first-page":"1753","DOI":"10.1110\/ps.9.9.1753","volume":"9","author":"Fiser","year":"2000","journal-title":"Protein Sci."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0025","doi-asserted-by":"crossref","first-page":"119","DOI":"10.1038\/ng0294-119","volume":"6","author":"Altschul","year":"1994","journal-title":"Nat. Genet."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0026","doi-asserted-by":"crossref","first-page":"227","DOI":"10.1016\/S0076-6879(96)66017-0","volume":"266","author":"Pearson","year":"1996","journal-title":"Methods Enzymol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0027","doi-asserted-by":"crossref","first-page":"145","DOI":"10.1002\/9780470110607.ch7","volume":"39","author":"Schuler","year":"1998","journal-title":"Methods Biochem. Anal."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0028","series-title":"\u201cProtein Structure Prediction: A Practical Approach\u201d","author":"Barton","year":"1998"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0029","doi-asserted-by":"crossref","first-page":"5913","DOI":"10.1073\/pnas.95.11.5913","volume":"95","author":"Levitt","year":"1998","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0030","first-page":"247","volume":"25","author":"Gribskov","year":"1994","journal-title":"Methods Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0031","doi-asserted-by":"crossref","first-page":"1501","DOI":"10.1006\/jmbi.1994.1104","volume":"235","author":"Krogh","year":"1994","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0032","doi-asserted-by":"crossref","first-page":"361","DOI":"10.1016\/S0959-440X(96)80056-X","volume":"6","author":"Eddy","year":"1996","journal-title":"Curr. Opin. Struct. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0033","doi-asserted-by":"crossref","first-page":"846","DOI":"10.1093\/bioinformatics\/14.10.846","volume":"14","author":"Karplus","year":"1998","journal-title":"Bioinformatics"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0034","doi-asserted-by":"crossref","first-page":"201","DOI":"10.1006\/jmbi.1998.2221","volume":"284","author":"Park","year":"1998","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0035","doi-asserted-by":"crossref","first-page":"164","DOI":"10.1126\/science.1853201","volume":"253","author":"Bowie","year":"1991","journal-title":"Science"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0036","doi-asserted-by":"crossref","first-page":"86","DOI":"10.1038\/358086a0","volume":"358","author":"Jones","year":"1992","journal-title":"Nature"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0037","doi-asserted-by":"crossref","first-page":"227","DOI":"10.1016\/0022-2836(92)90693-E","volume":"227","author":"Godzik","year":"1992","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0038","doi-asserted-by":"crossref","first-page":"15","DOI":"10.1016\/S0969-2126(96)00005-6","volume":"4","author":"Sippl","year":"1996","journal-title":"Structure"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0039","doi-asserted-by":"crossref","first-page":"200","DOI":"10.1016\/S0959-440X(97)80026-7","volume":"7","author":"Torda","year":"1997","journal-title":"Curr. Opin. Struct. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0040","doi-asserted-by":"crossref","first-page":"223","DOI":"10.1002\/prot.1087","volume":"44","author":"Lu","year":"2001","journal-title":"Proteins"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0041","doi-asserted-by":"crossref","first-page":"R27","DOI":"10.1016\/S1359-0278(97)00011-4","volume":"2","author":"Dunbrack","year":"1997","journal-title":"Fold. Des."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0042","doi-asserted-by":"crossref","first-page":"783","DOI":"10.2307\/2408678","volume":"39","author":"Felsenstein","year":"1985","journal-title":"Evolution"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0043","doi-asserted-by":"crossref","first-page":"318","DOI":"10.1002\/prot.340230306","volume":"23","author":"\u0160ali","year":"1995","journal-title":"Proteins"},{"issue":"Suppl. 1","key":"10.1016\/S0076-6879(03)74020-8_BIB.0044","doi-asserted-by":"crossref","first-page":"50","DOI":"10.1002\/(SICI)1097-0134(1997)1+<50::AID-PROT8>3.0.CO;2-S","author":"S\u00e1nchez","year":"1997","journal-title":"Proteins"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0045","doi-asserted-by":"crossref","first-page":"355","DOI":"10.1002\/prot.340170404","volume":"17","author":"Sippl","year":"1993","journal-title":"Proteins"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0046","doi-asserted-by":"crossref","first-page":"1156","DOI":"10.1093\/oxfordjournals.molbev.a026398","volume":"17","author":"Wu","year":"2000","journal-title":"Mol. Biol. Evol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0047","doi-asserted-by":"crossref","first-page":"13597","DOI":"10.1073\/pnas.95.23.13597","volume":"95","author":"S\u00e1nchez","year":"1998","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0048","doi-asserted-by":"crossref","first-page":"177","DOI":"10.1089\/106652701300312931","volume":"8","author":"Dewey","year":"2001","journal-title":"J. Comput. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0049","doi-asserted-by":"crossref","first-page":"243","DOI":"10.1006\/jmbi.2001.4762","volume":"310","author":"Shi","year":"2001","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0050","doi-asserted-by":"crossref","first-page":"721","DOI":"10.1006\/jmbi.2001.4495","volume":"307","author":"Blake","year":"2001","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0051","doi-asserted-by":"crossref","first-page":"1487","DOI":"10.1110\/ps.9.8.1487","volume":"9","author":"Jaroszewski","year":"2000","journal-title":"Protein Sci."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0052","doi-asserted-by":"crossref","first-page":"6","DOI":"10.1002\/(SICI)1097-0134(20000701)40:1<6::AID-PROT30>3.0.CO;2-7","volume":"40","author":"Sauder","year":"2000","journal-title":"Proteins"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0053","doi-asserted-by":"crossref","first-page":"1027","DOI":"10.1016\/0022-2836(81)90465-4","volume":"153","author":"Greer","year":"1981","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0054","doi-asserted-by":"crossref","first-page":"347","DOI":"10.1038\/326347a0","volume":"326","author":"Blundell","year":"1987","journal-title":"Nature"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0055","doi-asserted-by":"crossref","first-page":"819","DOI":"10.1002\/j.1460-2075.1986.tb04287.x","volume":"5","author":"Jones","year":"1986","journal-title":"EMBO J."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0056","doi-asserted-by":"crossref","first-page":"355","DOI":"10.1002\/prot.340050410","volume":"5","author":"Unger","year":"1989","journal-title":"Proteins"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0057","doi-asserted-by":"crossref","first-page":"335","DOI":"10.1093\/protein\/2.5.335","volume":"4","author":"Claessens","year":"1989","journal-title":"Protein Eng."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0058","doi-asserted-by":"crossref","first-page":"507","DOI":"10.1016\/0022-2836(92)90964-L","volume":"226","author":"Levitt","year":"1992","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0059","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1016\/0022-2836(91)90603-4","volume":"217","author":"Havel","year":"1991","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0060","doi-asserted-by":"crossref","first-page":"227","DOI":"10.1002\/pro.5560020216","volume":"2","author":"Srinivasan","year":"1993","journal-title":"Protein Sci."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0061","doi-asserted-by":"crossref","first-page":"626","DOI":"10.1002\/pro.5560020413","volume":"2","author":"Brocklehurst","year":"1993","journal-title":"Protein Sci."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0062","doi-asserted-by":"crossref","first-page":"325","DOI":"10.1016\/S1359-0278(96)00048-X","volume":"1","author":"Asz\u00f3di","year":"1996","journal-title":"Fold. Des."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0063","doi-asserted-by":"crossref","first-page":"3586","DOI":"10.1021\/jp973084f","volume":"102","author":"MacKerell","year":"1998","journal-title":"J. Phys. Chem. B"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0064","doi-asserted-by":"crossref","first-page":"133","DOI":"10.1002\/prot.1080","volume":"44","author":"Kolinski","year":"2001","journal-title":"Proteins"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0065","doi-asserted-by":"crossref","first-page":"435","DOI":"10.1016\/S0969-2126(02)00731-1","volume":"10","author":"Marti-Renom","year":"2002","journal-title":"Structure"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0066","doi-asserted-by":"crossref","first-page":"953","DOI":"10.1093\/protein\/7.8.953","volume":"7","author":"Fidelis","year":"1994","journal-title":"Protein Eng."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0067","doi-asserted-by":"crossref","first-page":"859","DOI":"10.1016\/S0022-2836(05)80269-4","volume":"213","author":"Sippl","year":"1990","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0068","doi-asserted-by":"crossref","first-page":"1453","DOI":"10.1002\/(SICI)1096-987X(199609)17:12<1453::AID-JCC6>3.3.CO;2-K","volume":"17","author":"Cheng","year":"1996","journal-title":"J. Comput. Chem."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0069","doi-asserted-by":"crossref","first-page":"83","DOI":"10.1038\/356083a0","volume":"356","author":"L\u00fcthy","year":"1992","journal-title":"Nature"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0070","doi-asserted-by":"crossref","first-page":"283","DOI":"10.1107\/S0021889892009944","volume":"26","author":"Laskowski","year":"1993","journal-title":"J. Appl. Crystallogr."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0071","doi-asserted-by":"crossref","first-page":"272","DOI":"10.1038\/381272a0","volume":"381","author":"Hooft","year":"1996","journal-title":"Nature"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0072","doi-asserted-by":"crossref","first-page":"335","DOI":"10.1016\/S0092-8674(00)80417-1","volume":"91","author":"Guenther","year":"1997","journal-title":"Cell"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0081","doi-asserted-by":"crossref","first-page":"1982","DOI":"10.1093\/nar\/gkg460","volume":"31","author":"John","year":"2003","journal-title":"Nuc. Acids Res."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0073","series-title":"\u201cModeller: A Protein Structure Modeling Program,\u201d","author":"\u0160ali","year":"2000"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0074","doi-asserted-by":"crossref","first-page":"6285","DOI":"10.1073\/pnas.96.11.6285","volume":"96","author":"Wu","year":"1999","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0075","doi-asserted-by":"crossref","first-page":"27","DOI":"10.1093\/nar\/26.1.27","volume":"26","author":"Barker","year":"1998","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0076","doi-asserted-by":"crossref","first-page":"443","DOI":"10.1016\/0022-2836(70)90057-4","volume":"48","author":"Needleman","year":"1970","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0077","doi-asserted-by":"crossref","first-page":"289","DOI":"10.1023\/A:1011292919947","volume":"19","author":"Barrientos","year":"2001","journal-title":"J. Biomol. NMR"},{"key":"10.1016\/S0076-6879(03)74020-8_BIB.0078","series-title":"\u201cProtein Structure Prediction: Methods and Protocols\u201d","first-page":"97","author":"S\u00e1nchez","year":"2000"}],"container-title":["Methods in Enzymology","Macromolecular Crystallography, Part D"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0076687903740208?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0076687903740208?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2021,6,17]],"date-time":"2021-06-17T18:36:45Z","timestamp":1623955005000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0076687903740208"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2003]]},"ISBN":["9780121827779"],"references-count":81,"URL":"https:\/\/doi.org\/10.1016\/s0076-6879(03)74020-8","relation":{},"ISSN":["0076-6879"],"issn-type":[{"value":"0076-6879","type":"print"}],"subject":[],"published":{"date-parts":[[2003]]}}}