{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,12,31]],"date-time":"2025-12-31T11:50:07Z","timestamp":1767181807090},"reference-count":51,"publisher":"Elsevier","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[1996]]},"DOI":"10.1016\/s0076-6879(96)66013-3","type":"book-chapter","created":{"date-parts":[[2004,5,18]],"date-time":"2004-05-18T20:10:15Z","timestamp":1084911015000},"page":"162-184","source":"Crossref","is-referenced-by-count":118,"title":["[11] Applying motif and profile searches"],"prefix":"10.1016","author":[{"given":"Peer","family":"Bork","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Toby J.","family":"Gibson","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"key":"10.1016\/S0076-6879(96)66013-3_BIB1","doi-asserted-by":"crossref","first-page":"393","DOI":"10.1016\/S0959-440X(94)90109-0","volume":"4","author":"Bork","year":"1994","journal-title":"Curr. Opin. Struct. Biol."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB2","unstructured":"E. V. Koonin, R. L. Tatusov, and K. E. Rudd, this volume [18]."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB3","doi-asserted-by":"crossref","first-page":"1677","DOI":"10.1002\/pro.5560011216","volume":"1","author":"Bork","year":"1992","journal-title":"Protein Sci."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB4","doi-asserted-by":"crossref","first-page":"493","DOI":"10.1002\/j.1460-2075.1994.tb06287.x","volume":"13","author":"Koonin","year":"1994","journal-title":"EMBO J."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB5","doi-asserted-by":"crossref","first-page":"955","DOI":"10.1111\/j.1365-2958.1995.tb02321.x","volume":"16","author":"Bork","year":"1995","journal-title":"Mol. Microbiol."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB6","doi-asserted-by":"crossref","first-page":"403","DOI":"10.1016\/S0022-2836(05)80360-2","volume":"215","author":"Altschul","year":"1990","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB7","doi-asserted-by":"crossref","first-page":"119","DOI":"10.1038\/ng0294-119","volume":"6","author":"Altschul","year":"1994","journal-title":"Nat. Genet."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB8","first-page":"2444","volume":"85","author":"Pearson","year":"1988"},{"key":"10.1016\/S0076-6879(96)66013-3_BIB9","doi-asserted-by":"crossref","first-page":"268","DOI":"10.1002\/pro.5560040213","volume":"4","author":"Bork","year":"1995","journal-title":"Protein Sci."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB10","doi-asserted-by":"crossref","first-page":"1","DOI":"10.3109\/10409239509085139","volume":"30","author":"Eisenhaber","year":"1995","journal-title":"Crit. Rev. Biochem. Mol. Biol."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB11","first-page":"12091","volume":"91","author":"Tatusov","year":"1994"},{"key":"10.1016\/S0076-6879(96)66013-3_BIB12","doi-asserted-by":"crossref","first-page":"208","DOI":"10.1126\/science.8211139","volume":"262","author":"Lawrence","year":"1993","journal-title":"Science"},{"key":"10.1016\/S0076-6879(96)66013-3_BIB13","first-page":"118","volume":"87","author":"Smith","year":"1990"},{"key":"10.1016\/S0076-6879(96)66013-3_BIB14","doi-asserted-by":"crossref","first-page":"77","DOI":"10.1093\/protein\/2.2.77","volume":"2","author":"Taylor","year":"1988","journal-title":"Protein Eng."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB15","doi-asserted-by":"crossref","first-page":"159","DOI":"10.1016\/0079-6107(89)90011-4","volume":"54","author":"Taylor","year":"1989","journal-title":"Prog. Biophys. Mol. Biol."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB16","doi-asserted-by":"crossref","first-page":"351","DOI":"10.1038\/329351a0","volume":"328","author":"Pearl","year":"1987","journal-title":"Nature (London)"},{"key":"10.1016\/S0076-6879(96)66013-3_BIB17","doi-asserted-by":"crossref","first-page":"616","DOI":"10.1126\/science.2548279","volume":"245","author":"Wlodawer","year":"1989","journal-title":"Science"},{"key":"10.1016\/S0076-6879(96)66013-3_BIB18","doi-asserted-by":"crossref","first-page":"3583","DOI":"10.1093\/nar\/22.17.3626","volume":"22","author":"Bairoch","year":"1994","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB19","doi-asserted-by":"crossref","DOI":"10.1016\/S0097-8485(96)80003-9","volume":"20","author":"Bucher","year":"1996","journal-title":"Comput. Chem."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB20","doi-asserted-by":"crossref","first-page":"6565","DOI":"10.1093\/nar\/19.23.6565","volume":"19","author":"Henikoff","year":"1991","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB21","doi-asserted-by":"crossref","first-page":"567","DOI":"10.1016\/0022-2836(87)90200-2","volume":"198","author":"Patthy","year":"1987","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB22","unstructured":"L. Patthy, this volume [12]."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB23","doi-asserted-by":"crossref","first-page":"347","DOI":"10.1111\/j.1432-1033.1990.tb19129.x","volume":"191","author":"Bork","year":"1990","journal-title":"Eur. J. Biochem."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB24","first-page":"183","volume":"9","author":"Rohde","year":"1993","journal-title":"Comput. Appl. Biosci."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB25","doi-asserted-by":"crossref","first-page":"389","DOI":"10.1016\/0022-2836(90)90133-7","volume":"212","author":"Barton","year":"1990","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB26","doi-asserted-by":"crossref","first-page":"102","DOI":"10.1016\/S0968-0004(00)88973-2","volume":"20","author":"Ponting","year":"1995","journal-title":"Trends Biochem. Sci."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB27","first-page":"4355","volume":"84","author":"Gribskov","year":"1987"},{"key":"10.1016\/S0076-6879(96)66013-3_BIB28","unstructured":"M. Gribskov and S. Veretnik, this volume [13]."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB29","doi-asserted-by":"crossref","first-page":"387","DOI":"10.1093\/nar\/12.1Part1.387","volume":"12","author":"Devereux","year":"1984","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB30","first-page":"19","volume":"10","author":"Thompson","year":"1994","journal-title":"Comput. Appl. Biosci."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB31","doi-asserted-by":"crossref","first-page":"139","DOI":"10.1002\/pro.5560030118","volume":"3","author":"L\u00fcthy","year":"1994","journal-title":"Protein Sci."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB32","doi-asserted-by":"crossref","first-page":"349","DOI":"10.1016\/0968-0004(94)90108-2","volume":"19","author":"Gibson","year":"1994","journal-title":"Trends Biochem. Sci."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB33","doi-asserted-by":"crossref","first-page":"951","DOI":"10.1016\/0022-2836(92)90877-M","volume":"228","author":"Frischman","year":"1993","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB34","unstructured":"J. Hanke, G. Beckmann, P. Bork, and J. G. Reich, Protein Sci.5, in press."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB35","doi-asserted-by":"crossref","first-page":"1315","DOI":"10.1002\/pro.5560030818","volume":"3","author":"Yi","year":"1993","journal-title":"Protein Sci."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB36","doi-asserted-by":"crossref","first-page":"383","DOI":"10.1016\/S0959-440X(94)90108-2","volume":"4","author":"Patthy","year":"1994","journal-title":"Curr. Opin. Struct. Biol."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB37","unstructured":"D. G. Higgins, J. D. Thompson, and T. J. Gibson, this volume [22]."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB38","first-page":"10915","volume":"89","author":"Henikoff","year":"1992"},{"key":"10.1016\/S0076-6879(96)66013-3_BIB39","doi-asserted-by":"crossref","first-page":"1323","DOI":"10.1093\/protein\/7.11.1323","volume":"11","author":"Benner","year":"1994","journal-title":"Protein Eng."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB40","doi-asserted-by":"crossref","first-page":"56","DOI":"10.1016\/S0968-0004(00)88957-4","volume":"20","author":"Aasland","year":"1995","journal-title":"Trends Biochem. Sci."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB41","doi-asserted-by":"crossref","first-page":"287","DOI":"10.1016\/0097-8485(94)85024-0","volume":"18","author":"Claverie","year":"1994","journal-title":"Comput. Chem."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB42","doi-asserted-by":"crossref","first-page":"343","DOI":"10.1016\/0968-0004(93)90071-T","volume":"18","author":"Musacchio","year":"1993","journal-title":"Trends Biochem. Sci."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB43","doi-asserted-by":"crossref","first-page":"584","DOI":"10.1006\/jmbi.1993.1413","volume":"232","author":"Rost","year":"1993","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB44","doi-asserted-by":"crossref","first-page":"2504","DOI":"10.1101\/gad.8.20.2504","volume":"8","author":"Marmorstein","year":"1994","journal-title":"Genes Dev."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB45","doi-asserted-by":"crossref","first-page":"779","DOI":"10.1016\/0092-8674(93)90405-F","volume":"72","author":"Waksman","year":"1993","journal-title":"Cell (Cambridge, Mass.)"},{"key":"10.1016\/S0076-6879(96)66013-3_BIB46","first-page":"2415","volume":"9","author":"Rane","year":"1994","journal-title":"Oncogene"},{"key":"10.1016\/S0076-6879(96)66013-3_BIB47","first-page":"1347","volume":"7","author":"Harpur","year":"1992","journal-title":"Oncogene"},{"key":"10.1016\/S0076-6879(96)66013-3_BIB48","doi-asserted-by":"crossref","DOI":"10.1016\/S0968-0004(00)88974-4","volume":"20","author":"Bork","year":"1995","journal-title":"Trends Biochem. Sci."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB49","doi-asserted-by":"crossref","first-page":"946","DOI":"10.1093\/nar\/22.6.946","volume":"22","author":"Gibson","year":"1994","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/S0076-6879(96)66013-3_BIB50","first-page":"7290","volume":"89","author":"Bork","year":"1992"},{"key":"10.1016\/S0076-6879(96)66013-3_BIB51","doi-asserted-by":"crossref","first-page":"376","DOI":"10.1038\/ng1293-376","volume":"5","author":"Meitinger","year":"1993","journal-title":"Nat. Genet."}],"container-title":["Methods in Enzymology","Computer Methods for Macromolecular Sequence Analysis"],"original-title":[],"deposited":{"date-parts":[[2020,4,2]],"date-time":"2020-04-02T05:08:41Z","timestamp":1585804121000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0076687996660133"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[1996]]},"references-count":51,"URL":"https:\/\/doi.org\/10.1016\/s0076-6879(96)66013-3","relation":{},"ISSN":["0076-6879"],"issn-type":[{"value":"0076-6879","type":"print"}],"subject":[],"published":{"date-parts":[[1996]]}}}