{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2023,4,9]],"date-time":"2023-04-09T08:10:09Z","timestamp":1681027809422},"reference-count":37,"publisher":"Elsevier BV","issue":"3","license":[{"start":{"date-parts":[[2001,5,1]],"date-time":"2001-05-01T00:00:00Z","timestamp":988675200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Computers &amp; Chemistry"],"published-print":{"date-parts":[[2001,5]]},"DOI":"10.1016\/s0097-8485(00)00104-2","type":"journal-article","created":{"date-parts":[[2002,7,25]],"date-time":"2002-07-25T14:26:50Z","timestamp":1027607210000},"page":"283-299","source":"Crossref","is-referenced-by-count":3,"title":["Protein structure determination by non-parametric regression and knowledge-based constraints"],"prefix":"10.1016","volume":"25","author":[{"given":"S.","family":"Jyothi","sequence":"first","affiliation":[]},{"given":"Rajani R.","family":"Joshi","sequence":"additional","affiliation":[]}],"member":"78","reference":[{"issue":"3","key":"10.1016\/S0097-8485(00)00104-2_BIB1","doi-asserted-by":"crossref","first-page":"953","DOI":"10.1063\/1.474448","article-title":"Secondary structure of polypeptide chains \u2014 interplay between short range and burial interactions","volume":"107","author":"Andrzej","year":"1997","journal-title":"J. Chem. Phys."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB2","doi-asserted-by":"crossref","first-page":"489","DOI":"10.1002\/bip.360340406","article-title":"Folding \u03b1-carbon backbones by distance geometry methods","volume":"34","author":"Aszodi","year":"1994","journal-title":"Biopolymers"},{"key":"10.1016\/S0097-8485(00)00104-2_BIB3","doi-asserted-by":"crossref","first-page":"308","DOI":"10.1006\/jmbi.1995.0436","article-title":"Global fold determination from a small number of distance restraints","volume":"251","author":"Aszodi","year":"1995","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB4","doi-asserted-by":"crossref","first-page":"132","DOI":"10.1016\/0076-6879(89)77009-9","article-title":"Proton NMR assignments","volume":"177","author":"Basus","year":"1989","journal-title":"Methods Enzymol."},{"issue":"2","key":"10.1016\/S0097-8485(00)00104-2_BIB5","doi-asserted-by":"crossref","first-page":"453","DOI":"10.1214\/aos\/1176347115","article-title":"Linear smoothers and additive models","volume":"17","author":"Buja","year":"1989","journal-title":"Ann. Stat."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB6","series-title":"Global Minimization of Non-Convex Energy Functions: Molecular Conformation and Protein Folding, American Mathematical Society, USA","first-page":"29","article-title":"Global optimization methods for protein folding problems","author":"Byrd","year":"1996"},{"key":"10.1016\/S0097-8485(00)00104-2_BIB7","doi-asserted-by":"crossref","first-page":"321","DOI":"10.1016\/0022-2836(80)90289-2","article-title":"On the prediction of protein structure \u2014 the significance of the root mean square deviation","volume":"138","author":"Cohen","year":"1980","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB8","series-title":"A First Course in Multivariate Statistics. Springer Texts in Statistics","author":"Flury","year":"1995"},{"key":"10.1016\/S0097-8485(00)00104-2_BIB9","doi-asserted-by":"crossref","first-page":"315","DOI":"10.1146\/annurev.biophys.25.1.315","article-title":"Computational studies of protein folding","volume":"25","author":"Friesner","year":"1996","journal-title":"Annu. Rev. Biophys. Biomol. Struct."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB10","doi-asserted-by":"crossref","first-page":"253","DOI":"10.1016\/0022-5193(79)90357-6","article-title":"On the computation of the tertiary structure of globular proteins II","volume":"77","author":"Goel","year":"1979","journal-title":"J. Theor. Biol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB11","doi-asserted-by":"crossref","first-page":"705","DOI":"10.1016\/0022-5193(82)90195-3","article-title":"On the computation of the tertiary structure of globular proteins III. Interresidue distances and computed structures","volume":"99","author":"Goel","year":"1982","journal-title":"J. Theor. Biol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB12","doi-asserted-by":"crossref","first-page":"109","DOI":"10.1016\/0022-2836(91)90861-Y","article-title":"PROTEIN FOLDING: effect of packing density on chain conformation","volume":"219","author":"Gregoret","year":"1991","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB13","series-title":"Generalized Additive Models","author":"Hastie","year":"1990"},{"issue":"5","key":"10.1016\/S0097-8485(00)00104-2_BIB14","doi-asserted-by":"crossref","first-page":"665","DOI":"10.1007\/BF02460044","article-title":"The theory and practice of distance geometry","volume":"45","author":"Havel","year":"1983","journal-title":"Bull. Math. Biol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB15","doi-asserted-by":"crossref","first-page":"183","DOI":"10.1016\/0022-2836(91)90883-8","article-title":"Database algorithm for generating protein backbone and side-chain coordinates from C\u03b1 trace","volume":"218","author":"Holm","year":"1991","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB16","doi-asserted-by":"crossref","first-page":"2536","DOI":"10.1073\/pnas.89.7.2536","article-title":"A lattice model for protein structure prediction at low resolution","volume":"89","author":"Hinds","year":"1992","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB17","unstructured":"Jyothi, S., Joshi, R.R., 1999. A new computational method for protein structure prediction: native distance estimation through nonparametric regression, International Symposium on Recent Trends in Biomedical Research, Tata Institute of Fundamental Research, Mumbai, India."},{"issue":"3","key":"10.1016\/S0097-8485(00)00104-2_BIB18","doi-asserted-by":"crossref","first-page":"167","DOI":"10.2174\/092986650703221206122300","article-title":"3D-structure of human seminal plasma prostatic inhibin by nonparametric regression","volume":"7","author":"Jyothi","year":"2000","journal-title":"Prot. Pep. Lett."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB19","unstructured":"Jyothi, S., Joshi, R.R., 2000b. Knowledge based estimation of long range contacts in proteins \u2013 structure prediction by nonparametric regression. In preparation."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB20","doi-asserted-by":"crossref","first-page":"1075","DOI":"10.1073\/pnas.81.4.1075","article-title":"On the use of sequence homologies to predict protein structure: identical pentapeptides can have completely different conformations","volume":"81","author":"Kabsh","year":"1984","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB21","doi-asserted-by":"crossref","first-page":"159","DOI":"10.1016\/0076-6879(89)77011-7","article-title":"Distance geometry","volume":"177","author":"Kuntz","year":"1989","journal-title":"Methods Enzymol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB22","doi-asserted-by":"crossref","first-page":"939","DOI":"10.1002\/bip.1979.360180414","article-title":"Application of distance geometry to protein structure calculations","volume":"18","author":"Kuntz","year":"1979","journal-title":"Biopolymers."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB23","first-page":"1","article-title":"The Jackknife: a review","volume":"61","author":"Miller","year":"1974","journal-title":"Biometrika"},{"key":"10.1016\/S0097-8485(00)00104-2_BIB24","doi-asserted-by":"crossref","first-page":"5027","DOI":"10.1073\/pnas.91.11.5027","article-title":"An algorithm to generate low-resolution protein tertiary structures from knowledge of secondary structure","volume":"91","author":"Monge","year":"1994","journal-title":"Proc. Natl. Acad. Sci. U. S. A."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB25","series-title":"Global Minimization of Non-Convex Energy Functions: Molecular Conformation and Protein-Folding, American Mathematical Society, USA","first-page":"151","article-title":"\u03b5-optimal solutions to distance geometry problems via global continuation","author":"More","year":"1996"},{"issue":"3","key":"10.1016\/S0097-8485(00)00104-2_BIB26","doi-asserted-by":"crossref","first-page":"814","DOI":"10.1137\/S1052623495283024","article-title":"Global continuation for distance geometry problems","volume":"7","author":"More","year":"1997","journal-title":"SIAM J. Optim."},{"issue":"3","key":"10.1016\/S0097-8485(00)00104-2_BIB27","doi-asserted-by":"crossref","first-page":"219","DOI":"10.1023\/A:1008380219900","article-title":"Distance geometry optimization for protein structures","volume":"15","author":"More","year":"1999","journal-title":"J. Global Optim."},{"issue":"3","key":"10.1016\/S0097-8485(00)00104-2_BIB28","doi-asserted-by":"crossref","first-page":"407","DOI":"10.1137\/S0036144594278060","article-title":"Molecular modelling of proteins and mathematical prediction of protein structure","volume":"39","author":"Neumaier","year":"1997","journal-title":"SIAM Rev."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB29","doi-asserted-by":"crossref","first-page":"317","DOI":"10.1016\/0014-5793(88)81148-7","article-title":"X-PLOR \u2013 a hybrid distance geometry dynamical simulated annealing calculation strategy","volume":"289","author":"Nilges","year":"1988","journal-title":"FEBS Lett."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB30","unstructured":"Richards, F.M., 1992. The protein folding problem, Scientific American, pp. 34\u201341."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB31","unstructured":"SAS\/STAT Software, 1995. Usage and Reference (vols 1 and 2), Version 6, 1st edn, SAS Institute Inc."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB32","doi-asserted-by":"crossref","first-page":"204","DOI":"10.1016\/0076-6879(89)77012-9","article-title":"Molecular dynamics simulation techniques for determination of molecular structures from nuclear magnetic resonance data","volume":"177","author":"Scheek","year":"1989","journal-title":"Methods Enzymol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB33","doi-asserted-by":"crossref","first-page":"859","DOI":"10.1016\/S0022-2836(05)80269-4","article-title":"Calculation of conformational ensembles from potentials of mean force","volume":"213","author":"Sippl","year":"1990","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB34","doi-asserted-by":"crossref","first-page":"217","DOI":"10.1006\/jmbi.1996.0720","article-title":"monsster: a method for folding globular proteins with a small number of distance restraints","volume":"265","author":"Skolnick","year":"1997","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB35","doi-asserted-by":"crossref","first-page":"195","DOI":"10.1006\/jtbi.1996.0213","article-title":"A new approach for clustering the amino acids","volume":"183","author":"Stanfel","year":"1996","journal-title":"J. Theor. Biol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB36","doi-asserted-by":"crossref","first-page":"457","DOI":"10.1006\/jmbi.1996.0175","article-title":"Statistical potentials extracted from protein structures: how accurate are they?","volume":"257","author":"Thomas","year":"1996","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0097-8485(00)00104-2_BIB37","doi-asserted-by":"crossref","first-page":"592","DOI":"10.1006\/jmbi.1997.1052","article-title":"Automated analysis of protein NMR assignments using methods from A.I.","volume":"269","author":"Zimmerman","year":"1997","journal-title":"J. Mol. Biol."}],"container-title":["Computers &amp; Chemistry"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0097848500001042?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0097848500001042?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2023,4,9]],"date-time":"2023-04-09T07:46:01Z","timestamp":1681026361000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0097848500001042"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2001,5]]},"references-count":37,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2001,5]]}},"alternative-id":["S0097848500001042"],"URL":"https:\/\/doi.org\/10.1016\/s0097-8485(00)00104-2","relation":{},"ISSN":["0097-8485"],"issn-type":[{"value":"0097-8485","type":"print"}],"subject":[],"published":{"date-parts":[[2001,5]]}}}