{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,6,6]],"date-time":"2024-06-06T21:21:43Z","timestamp":1717708903645},"reference-count":24,"publisher":"Elsevier BV","issue":"3","license":[{"start":{"date-parts":[[2003,7,1]],"date-time":"2003-07-01T00:00:00Z","timestamp":1057017600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Computational Biology and Chemistry"],"published-print":{"date-parts":[[2003,7]]},"DOI":"10.1016\/s0097-8485(02)00074-8","type":"journal-article","created":{"date-parts":[[2003,9,3]],"date-time":"2003-09-03T09:54:17Z","timestamp":1062582857000},"page":"241-252","source":"Crossref","is-referenced-by-count":10,"title":["Ab-initio prediction and reliability of protein structural genomics by PROPAINOR algorithm"],"prefix":"10.1016","volume":"27","author":[{"given":"Rajani R.","family":"Joshi","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"S.","family":"Jyothi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"key":"10.1016\/S0097-8485(02)00074-8_BIB1","doi-asserted-by":"crossref","first-page":"953","DOI":"10.1063\/1.474448","article-title":"Secondary structure of polypeptide chains\u2014interplay between short range and burial interactions","volume":"107","author":"Andrzej","year":"1997","journal-title":"J. Chem. Phys."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB2","doi-asserted-by":"crossref","first-page":"308","DOI":"10.1006\/jmbi.1995.0436","article-title":"Global fold determination from a small number of distance restraints","volume":"251","author":"Aszodi","year":"1995","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB3","doi-asserted-by":"crossref","first-page":"125","DOI":"10.1023\/A:1008315111278","article-title":"A tracked approach for automated NMR assignments in proteins (TATAPRO)","volume":"17","author":"Atreya","year":"2000","journal-title":"J. Biomol. NMR"},{"key":"10.1016\/S0097-8485(02)00074-8_BIB4","doi-asserted-by":"crossref","first-page":"222","DOI":"10.1021\/bi00699a002","article-title":"Prediction of protein conformation","volume":"13","author":"Chou","year":"1974","journal-title":"Biochemistry"},{"key":"10.1016\/S0097-8485(02)00074-8_BIB5","doi-asserted-by":"crossref","unstructured":"Cohen, F.E., Sternberg, M.J.E., 1980. On the Predication of Protein Structure: The Significance of the Root Mean Square Devviation. J. Mol. Biol. 138, 321\u2013333.","DOI":"10.1016\/0022-2836(80)90289-2"},{"key":"10.1016\/S0097-8485(02)00074-8_BIB6","doi-asserted-by":"crossref","first-page":"15","DOI":"10.1093\/protein\/12.1.15","article-title":"A neural network based predictor of residue contacts in proteins","volume":"12","author":"Fariselli","year":"1999","journal-title":"Protein Eng."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB7","doi-asserted-by":"crossref","first-page":"21","DOI":"10.1137\/0802003","article-title":"Global convergence properties of conjugate gradient methods","volume":"2","author":"Gilbert","year":"1992","journal-title":"SIAM J. Optim."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB8","doi-asserted-by":"crossref","first-page":"267","DOI":"10.1006\/jmbi.1999.2861","article-title":"Ab-initio fold prediction of small helical proteins using distance geometry and knowledge-based scoring functions","volume":"290","author":"Huang","year":"1999","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB9","doi-asserted-by":"crossref","first-page":"50","DOI":"10.1007\/s00894-001-0063-8","article-title":"Ab-initio structure of human seminal plasma prostatic inhibin gives significant insight into its biological functions","volume":"8","author":"Joshi","year":"2002","journal-title":"J. Mol. Model."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB10","doi-asserted-by":"crossref","first-page":"283","DOI":"10.1016\/S0097-8485(00)00104-2","article-title":"Protein structure determination by nonparametric regression and knowledge-based constraints","volume":"25","author":"Jyothi","year":"2001","journal-title":"Comput. Chem."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB11","unstructured":"Jyothi, S., Joshi, R.R., 2002. Ab-initio computation of the 3D-structures of proteins by nonparametric statistical methods\u2014medium and short range distance estimates (communicated)."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB12","doi-asserted-by":"crossref","first-page":"1241","DOI":"10.1093\/protein\/10.11.1241","article-title":"Protein distance constraints predicted by neural networks and probability density functions","volume":"10","author":"Lund","year":"1997","journal-title":"Protein Eng."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB13","doi-asserted-by":"crossref","unstructured":"More, J.J., Zhijun, Wu., 1999. Distance Geometry Optimization for Protein Structures. J. Global Optim., 15, 219\u2013234.","DOI":"10.1023\/A:1008380219900"},{"key":"10.1016\/S0097-8485(02)00074-8_BIB14","doi-asserted-by":"crossref","first-page":"317","DOI":"10.1016\/0014-5793(88)81148-7","article-title":"x-plor\u2014a hybrid distance geometry dynamical simulated annealing calculation strategy","volume":"289","author":"Nilges","year":"1988","journal-title":"FEBS Lett."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB15","doi-asserted-by":"crossref","first-page":"25","DOI":"10.1016\/S1359-0278(97)00060-6","article-title":"Improving contact predictions by the combination of correlated mutations and other sources of sequence information","volume":"2","author":"Olmea","year":"1997","journal-title":"Fold. Des."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB16","doi-asserted-by":"crossref","first-page":"419","DOI":"10.1006\/jmbi.1997.1595","article-title":"Fold assembly of small proteins using monte-carlo simulations driven by restraints derived from multiple sequence alignments","volume":"277","author":"Ortiz","year":"1998","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB17","doi-asserted-by":"crossref","first-page":"186","DOI":"10.1002\/(SICI)1097-0134(1999)37:3+<186::AID-PROT23>3.0.CO;2-D","article-title":"Improved ab-initio predictions with a simplified flexible geometry model","volume":"S3","author":"Osguthorpe","year":"1999","journal-title":"Proteins Struct. Funct. Genet."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB18","doi-asserted-by":"crossref","unstructured":"Pillardy, J., Czaplewski, C., Limo, A. et al., 2001. Recent improvements in the prediction of protein structure by global optimization of a potential energy function, Proc. Natl. Acad. Sci. USA., 98, 2329-2333.","DOI":"10.1073\/pnas.041609598"},{"key":"10.1016\/S0097-8485(02)00074-8_BIB19","unstructured":"SAS\/STAT, 1995. Software usage and reference, version 6, vols. 1 and 2, 1st ed., SAS Institute Inc, NC."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB20","doi-asserted-by":"crossref","unstructured":"Simons, K.T., Ruczinski, I., Kooperberg, C., Fox, B.A., Bystroff, C., Baker, D., 1998. Improved Recognition of Native-Like Protein Structures Using a Combination of Sequence-Dependent and Sequence-Independent Features of Proteins. PROTEINS: Struc. Func. Genitics, 34, 82\u201395.","DOI":"10.1002\/(SICI)1097-0134(19990101)34:1<82::AID-PROT7>3.0.CO;2-A"},{"key":"10.1016\/S0097-8485(02)00074-8_BIB21","doi-asserted-by":"crossref","first-page":"1191","DOI":"10.1006\/jmbi.2000.4459","article-title":"Prospects for ab-initio protein structural genomics","volume":"306","author":"Simons","year":"2001","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB22","doi-asserted-by":"crossref","first-page":"859","DOI":"10.1016\/S0022-2836(05)80269-4","article-title":"Calculation of conformational ensembles from potentials of mean force","volume":"213","author":"Sippl","year":"1990","journal-title":"J. Mol. Biol."},{"key":"10.1016\/S0097-8485(02)00074-8_BIB23","series-title":"A Management Guide to PERT\/CPM","author":"Wiest","year":"1977"},{"key":"10.1016\/S0097-8485(02)00074-8_BIB24","doi-asserted-by":"crossref","first-page":"171","DOI":"10.1006\/jmbi.2000.3835","article-title":"Ab-initio construction of protein tertiary structures using a hierarchical approach","volume":"300","author":"Xia","year":"2000","journal-title":"J. Mol. Biol."}],"container-title":["Computational Biology and Chemistry"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0097848502000748?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0097848502000748?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2019,2,25]],"date-time":"2019-02-25T07:59:51Z","timestamp":1551081591000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0097848502000748"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2003,7]]},"references-count":24,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2003,7]]}},"alternative-id":["S0097848502000748"],"URL":"https:\/\/doi.org\/10.1016\/s0097-8485(02)00074-8","relation":{},"ISSN":["1476-9271"],"issn-type":[{"value":"1476-9271","type":"print"}],"subject":[],"published":{"date-parts":[[2003,7]]}}}