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These inconsistencies make comparative studies difficult. To allow rapid data preparation of a large number of complete genomes, automation and speed are important for genome re-annotation. Here we introduce an open-source rapid genome re-annotation software system, Restauro-G, specialized for bacterial genomes. Restauro-G re-annotates a genome by similarity searches utilizing the BLAST-Like Alignment Tool, referring to protein databases such as UniProt KB, NCBI nr, NCBI COGs, Pfam, and PSORTb. Re-annotation by Restauro-G achieved over 98% accuracy for most bacterial chromosomes in comparison with the original manually curated annotation of EMBL releases. Restauro-G was developed in the generic bioinformatics workbench G-language Genome Analysis Environment and is distributed at http:\/\/restauro-g.iab.keio.ac.jp\/ under the GNU General Public License.<\/jats:p>","DOI":"10.1016\/s1672-0229(07)60014-x","type":"journal-article","created":{"date-parts":[[2007,6,16]],"date-time":"2007-06-16T14:12:54Z","timestamp":1182003174000},"page":"53-58","source":"Crossref","is-referenced-by-count":6,"title":["Restauro-G: A Rapid Genome Re-Annotation System for Comparative Genomics"],"prefix":"10.1093","volume":"5","author":[{"given":"Satoshi","family":"Tamaki","sequence":"first","affiliation":[{"name":"Institute for Advanced Biosciences, Keio University , Fujisawa, 252-8520 , Japan"},{"name":"Department of Environmental Information, Keio University , Fujisawa, 252-8520 , Japan"}]},{"given":"Kazuharu","family":"Arakawa","sequence":"additional","affiliation":[{"name":"Institute for Advanced Biosciences, Keio University , Fujisawa, 252-8520 , 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